pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
354 values
r_factor
stringclasses
342 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
7qti
G
H
0
K
protein
null
spike glycoprotein,envelope glycoprotein
VIRAL PROTEIN
08/03/22
SARS-CoV-2 S Omicron Spike B.1.1.529 - 3-P2G3 and 1-P5C3 Fabs (Global)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Ni, D., Lau, K., Turelli, P., Fenwick, C., Perez, L., Pojer, F., Stahlberg, H., Pantaleo, G., Trono, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7qti
B
C
0
A
protein
null
spike glycoprotein,envelope glycoprotein
VIRAL PROTEIN
08/03/22
SARS-CoV-2 S Omicron Spike B.1.1.529 - 3-P2G3 and 1-P5C3 Fabs (Global)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Ni, D., Lau, K., Turelli, P., Fenwick, C., Perez, L., Pojer, F., Stahlberg, H., Pantaleo, G., Trono, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7qti
F
E
0
A
protein
null
spike glycoprotein,envelope glycoprotein
VIRAL PROTEIN
08/03/22
SARS-CoV-2 S Omicron Spike B.1.1.529 - 3-P2G3 and 1-P5C3 Fabs (Global)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Ni, D., Lau, K., Turelli, P., Fenwick, C., Perez, L., Pojer, F., Stahlberg, H., Pantaleo, G., Trono, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7qti
I
J
0
D
protein
null
spike glycoprotein,envelope glycoprotein
VIRAL PROTEIN
08/03/22
SARS-CoV-2 S Omicron Spike B.1.1.529 - 3-P2G3 and 1-P5C3 Fabs (Global)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Ni, D., Lau, K., Turelli, P., Fenwick, C., Perez, L., Pojer, F., Stahlberg, H., Pantaleo, G., Trono, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7qtj
B
C
0
A
protein
null
surface glycoprotein
VIRAL PROTEIN
08/03/22
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD up - 1-P2G3 and 1-P5C3 Fabs (Local)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Ni, D., Lau, K., Turelli, P., Fenwick, C., Perez, L., Pojer, F., Stahlberg, H., Pantaleo, G., Trono, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7qtj
F
E
0
A
protein
null
surface glycoprotein
VIRAL PROTEIN
08/03/22
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD up - 1-P2G3 and 1-P5C3 Fabs (Local)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Ni, D., Lau, K., Turelli, P., Fenwick, C., Perez, L., Pojer, F., Stahlberg, H., Pantaleo, G., Trono, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7qtk
B
C
0
D
protein
null
surface glycoprotein
VIRAL PROTEIN
08/03/22
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD down - 1-P2G3 Fab (Local)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Ni, D., Lau, K., Turelli, P., Fenwick, C., Perez, L., Pojer, F., Stahlberg, H., Pantaleo, G., Trono, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7t7b
H
L
0
A
protein
null
spike protein s1
IMMUNE SYSTEM/VIRAL PROTEIN
08/03/22
Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with a cross-neutralizing antibody ADI-62113 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, H., Wilson, I.A.
2.59
X-RAY DIFFRACTION
0.267
0.221
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
7t9i
N
null
0
X | Y
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
08/03/22
Native human TSH bound to human Thyrotropin receptor in complex with miniGs399 (composite structure)
Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens
Faust, B., Cheng, Y., Manglik, A.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7tcq
H
L
0
C
peptide
null
pegylated spike s2 peptide
VIRAL PROTEIN/IMMUNE SYSTEM
08/03/22
Crystal structure of SARS-CoV-2 neutralizing antibody WS6 in complex with spike S2 peptide
Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
severe acute respiratory syndrome coronavirus2
Zhou, T., Kwong, P.D.
2.02
X-RAY DIFFRACTION
0.213
0.172
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
7tcq
A
B
0
D
peptide
null
pegylated spike s2 peptide
VIRAL PROTEIN/IMMUNE SYSTEM
08/03/22
Crystal structure of SARS-CoV-2 neutralizing antibody WS6 in complex with spike S2 peptide
Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
severe acute respiratory syndrome coronavirus2
Zhou, T., Kwong, P.D.
2.02
X-RAY DIFFRACTION
0.213
0.172
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
7u09
H
L
0
A
peptide
null
sars-cov-2 s fusion peptide
VIRAL PROTEIN/IMMUNE SYSTEM
08/03/22
Crystal Structure of C13B8 Fab in complex with SARS-CoV-2 S fusion peptide
mammal environmental sample; SYNTHETIC CONSTRUCT
mammal environmental sample
mammal environmental sample
severe acute respiratory syndrome coronavirus2
Tortorici, M.A., Veesler, D.
2.1
X-RAY DIFFRACTION
0.239
0.190
false
true
IGHV4
IGLV3
Lambda
null
null
null
null
null
7u0a
H
L
0
A
peptide
null
sars-cov-2 s fusion peptide
VIRAL PROTEIN/IMMUNE SYSTEM
08/03/22
Crystal Structure of C77G12 Fab in complex with SARS-CoV-2 S fusion peptide
mammal environmental sample; SYNTHETIC CONSTRUCT
mammal environmental sample
mammal environmental sample
severe acute respiratory syndrome coronavirus2
Tortorici, M.A., Veesler, D.
1.7
X-RAY DIFFRACTION
0.187
0.154
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7u0e
A
B
0
D
peptide
null
sars-cov-2 s fusion peptide
VIRAL PROTEIN/IMMUNE SYSTEM
08/03/22
Crystal Structure of C13C9 Fab in complex with SARS-CoV-2 S fusion peptide
mammal environmental sample; SYNTHETIC CONSTRUCT
mammal environmental sample
mammal environmental sample
severe acute respiratory syndrome coronavirus2
Tortorici, M.A., Veesler, D.
2.1
X-RAY DIFFRACTION
0.203
0.179
false
true
IGHV1
IGLV3
Lambda
null
null
null
null
null
7u0e
H
L
0
C
peptide
null
sars-cov-2 s fusion peptide
VIRAL PROTEIN/IMMUNE SYSTEM
08/03/22
Crystal Structure of C13C9 Fab in complex with SARS-CoV-2 S fusion peptide
mammal environmental sample; SYNTHETIC CONSTRUCT
mammal environmental sample
mammal environmental sample
severe acute respiratory syndrome coronavirus2
Tortorici, M.A., Veesler, D.
2.1
X-RAY DIFFRACTION
0.203
0.179
false
true
IGHV1
IGLV3
Lambda
null
null
null
null
null
7utz
N
null
0
Y | Z | X
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | guanine nucleotide-binding protein g(s) subunit alphaisoforms short
MEMBRANE PROTEIN
08/03/22
Human thyrotropin analog TR1402 bound to human Thyrotropin receptor in complex with miniGs399 (composite structure)
Homo sapiens
homo sapiens
null
homo sapiens | homo sapiens | homo sapiens
Faust, B., Cheng, Y., Manglik, A.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7vgr
D
C
0
A
protein
null
membrane protein
VIRAL PROTEIN/IMMUNE SYSTEM
08/03/22
SARS-CoV-2 M protein dimer (long form) in complex with YN7756_1 Fab
Mus musculus; Severe acute respiratory syndrome coronavirus 2
mus musculus
mus musculus
severe acute respiratory syndrome coronavirus2
Zhang, Z., Ohto, U., Shimizu, T.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
IGKV3
Kappa
null
null
null
null
null
7vgr
F
E
0
B
protein
null
membrane protein
VIRAL PROTEIN/IMMUNE SYSTEM
08/03/22
SARS-CoV-2 M protein dimer (long form) in complex with YN7756_1 Fab
Mus musculus; Severe acute respiratory syndrome coronavirus 2
mus musculus
mus musculus
severe acute respiratory syndrome coronavirus2
Zhang, Z., Ohto, U., Shimizu, T.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
IGKV3
Kappa
null
null
null
null
null
7vgs
D
C
0
A
protein
null
membrane protein
VIRAL PROTEIN/IMMUNE SYSTEM
08/03/22
SARS-CoV-2 M protein dimer (short form) in complex with YN7717_9 Fab
Mus musculus; Severe acute respiratory syndrome coronavirus 2
mus musculus
mus musculus
severe acute respiratory syndrome coronavirus2
Zhang, Z., Ohto, U., Shimizu, T.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
IGKV3
Kappa
null
null
null
null
null
7vgs
F
E
0
B
protein
null
membrane protein
VIRAL PROTEIN/IMMUNE SYSTEM
08/03/22
SARS-CoV-2 M protein dimer (short form) in complex with YN7717_9 Fab
Mus musculus; Severe acute respiratory syndrome coronavirus 2
mus musculus
mus musculus
severe acute respiratory syndrome coronavirus2
Zhang, Z., Ohto, U., Shimizu, T.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
IGKV3
Kappa
null
null
null
null
null
7vke
B
null
0
A
protein
null
adp-ribosyl cyclase/cyclic adp-ribose hydrolase 1
HYDROLASE
08/03/22
Crystal structure of human CD38 ECD in complex with UniDab(TM) F11A
Homo sapiens
homo sapiens
null
homo sapiens
Schooten, W.V., Schellenberger, U., Ugamraj, H.S., Manicka, S., Bijpuria, S., Gondu, R.K.
1.9
X-RAY DIFFRACTION
0.231
0.193
false
true
IGHV3
null
null
null
null
null
null
null
7vvj
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
08/03/22
PTHrP-bound human PTH1R in complex with Gs
Bos taurus; Homo sapiens; Rattus norvegicus; unidentified; SYNTHETIC CONSTRUCT
unidentified
null
homo sapiens | rattus norvegicus
Kobayashi, K., Kusakizako, T., Miyauchi, H., Tomita, A., Kobayashi, K., Shihoya, W., Yamashita, K., Nishizawa, T., Kato, H.E., Nureki, O.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7vvk
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
08/03/22
PTH-bound human PTH1R in complex with Gs (class1)
Bos taurus; Homo sapiens; Rattus norvegicus; unidentified; SYNTHETIC CONSTRUCT
unidentified
null
homo sapiens | rattus norvegicus
Kobayashi, K., Kusakizako, T., Miyauchi, H., Tomita, A., Kobayashi, K., Shihoya, W., Yamashita, K., Nishizawa, T., Kato, H.E., Nureki, O.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7vvl
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
08/03/22
PTH-bound human PTH1R in complex with Gs (class2)
Bos taurus; Homo sapiens; Rattus norvegicus; unidentified; SYNTHETIC CONSTRUCT
unidentified
null
homo sapiens | rattus norvegicus
Kobayashi, K., Kusakizako, T., Miyauchi, H., Tomita, A., Kobayashi, K., Shihoya, W., Yamashita, K., Nishizawa, T., Kato, H.E., Nureki, O.
2.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7vvm
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
08/03/22
PTH-bound human PTH1R in complex with Gs (class3)
Bos taurus; Homo sapiens; Rattus norvegicus; unidentified; SYNTHETIC CONSTRUCT
unidentified
null
homo sapiens | rattus norvegicus
Kobayashi, K., Kusakizako, T., Miyauchi, H., Tomita, A., Kobayashi, K., Shihoya, W., Yamashita, K., Nishizawa, T., Kato, H.E., Nureki, O.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7vvn
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
08/03/22
PTH-bound human PTH1R in complex with Gs (class4)
Bos taurus; Homo sapiens; Rattus norvegicus; unidentified; SYNTHETIC CONSTRUCT
unidentified
null
homo sapiens | rattus norvegicus
Kobayashi, K., Kusakizako, T., Miyauchi, H., Tomita, A., Kobayashi, K., Shihoya, W., Yamashita, K., Nishizawa, T., Kato, H.E., Nureki, O.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7vvo
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
08/03/22
PTH-bound human PTH1R in complex with Gs (class5)
Bos taurus; Homo sapiens; Rattus norvegicus; unidentified; SYNTHETIC CONSTRUCT
unidentified
null
homo sapiens | rattus norvegicus
Kobayashi, K., Kusakizako, T., Miyauchi, H., Tomita, A., Kobayashi, K., Shihoya, W., Yamashita, K., Nishizawa, T., Kato, H.E., Nureki, O.
4.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7xms
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
08/03/22
CryoEM structure of somatostatin receptor 4 (SSTR4) in complex with Gi1 and its endogeneous ligand SST-14
Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens
Wenli, Z., Shuo, H., Na, Q., Wenbo, Z., Mengjie, L., Dehua, Y., Ming-Wei, W., Wu, B., Zhao, Q.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7xmt
S
s
0
A | C | B
protein | peptide | protein
NA | NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
STRUCTURAL PROTEIN
08/03/22
CryoEM structure of somatostatin receptor 4 (SSTR4) with Gi1 and J-2156
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens | homo sapiens
Wenli, Z., Shuo, H., Na, Q., Wenbo, Z., Mengjie, L., Dehua, Y., Ming-Wei, W., Wu, B., Zhao, Q.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
8df5
A
B
0
R
protein
null
spike protein s1
VIRAL PROTEIN/Hydrolase/Immune System
08/03/22
SARS-CoV-2 Beta RBD in complex with human ACE2 and S304 Fab and S309 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
2.7
X-RAY DIFFRACTION
0.217
0.177
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
8df5
C
D
0
S
protein
null
spike protein s1
VIRAL PROTEIN/Hydrolase/Immune System
08/03/22
SARS-CoV-2 Beta RBD in complex with human ACE2 and S304 Fab and S309 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
2.7
X-RAY DIFFRACTION
0.217
0.177
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
8df5
H
L
0
R
protein
null
spike protein s1
VIRAL PROTEIN/Hydrolase/Immune System
08/03/22
SARS-CoV-2 Beta RBD in complex with human ACE2 and S304 Fab and S309 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
2.7
X-RAY DIFFRACTION
0.217
0.177
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8df5
M
N
0
S
protein
null
spike protein s1
VIRAL PROTEIN/Hydrolase/Immune System
08/03/22
SARS-CoV-2 Beta RBD in complex with human ACE2 and S304 Fab and S309 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
2.7
X-RAY DIFFRACTION
0.217
0.177
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8djk
H
L
0
B | A
protein | protein
NA | NA
ubia prenyltransferase domain-containing protein 1 | 3-hydroxy-3-methylglutaryl-coenzyme a reductase
Oxidoreductase/Immune System
08/03/22
HMGCR-UBIAD1 Complex State 2
Cricetulus griseus; Escherichia coli; Mus musculus
mus musculus
mus musculus
cricetulus griseus | cricetulus griseus
Chen, H., Qi, X., Li, X.
3.33
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV5
Kappa
null
null
null
null
null
8djm
H
L
0
B | A
protein | protein
NA | NA
ubia prenyltransferase domain-containing protein 1 | 3-hydroxy-3-methylglutaryl-coenzyme a reductase
Oxidoreductase/Immune System
08/03/22
HMGCR-UBIAD1 Complex State 1
Cricetulus griseus; Escherichia coli; Mus musculus
mus musculus
mus musculus
cricetulus griseus | cricetulus griseus
Chen, H., Qi, X., Li, X.
3.23
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV5
Kappa
null
null
null
null
null
8dt3
H
L
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
08/03/22
Cryo-EM structure of spike binding to Fab of neutralizing antibody (locally refined)
Mus musculus; Severe acute respiratory syndrome coronavirus 2
mus musculus
mus musculus
severe acute respiratory syndrome coronavirus2
Sun, P.C., Fang, Y., Bai, X.C., Chen, Z.J.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV10
Kappa
null
null
null
null
null
7wjy
B
C
0
A | G
protein | protein
NA | NA
spike glycoprotein | spike glycoprotein
VIRAL PROTEIN
07/13/22
Omicron spike trimer with 6m6 antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
7wjy
E
F
0
D
protein
null
spike glycoprotein
VIRAL PROTEIN
07/13/22
Omicron spike trimer with 6m6 antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
8dfl
E
null
0
A
protein
null
potassium voltage-gated channel subfamily a member 3,greenfluorescent protein fusion
IMMUNE SYSTEM
07/13/22
Structure of human Kv1.3 with A0194009G09 nanobodies (alternate conformation)
Aequorea victoria; Homo sapiens; Lama glama
lama glama
null
homo sapiens, aequorea victoria
Meyerson, J.R., Selvakumar, P.
3.25
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8dfl
F
null
0
B
protein
null
potassium voltage-gated channel subfamily a member 3,greenfluorescent protein fusion
IMMUNE SYSTEM
07/13/22
Structure of human Kv1.3 with A0194009G09 nanobodies (alternate conformation)
Aequorea victoria; Homo sapiens; Lama glama
lama glama
null
homo sapiens, aequorea victoria
Meyerson, J.R., Selvakumar, P.
3.25
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8dfl
G
null
0
C
protein
null
potassium voltage-gated channel subfamily a member 3,greenfluorescent protein fusion
IMMUNE SYSTEM
07/13/22
Structure of human Kv1.3 with A0194009G09 nanobodies (alternate conformation)
Aequorea victoria; Homo sapiens; Lama glama
lama glama
null
homo sapiens, aequorea victoria
Meyerson, J.R., Selvakumar, P.
3.25
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8dfl
H
null
0
D
protein
null
potassium voltage-gated channel subfamily a member 3,greenfluorescent protein fusion
IMMUNE SYSTEM
07/13/22
Structure of human Kv1.3 with A0194009G09 nanobodies (alternate conformation)
Aequorea victoria; Homo sapiens; Lama glama
lama glama
null
homo sapiens, aequorea victoria
Meyerson, J.R., Selvakumar, P.
3.25
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7re7
I
J
0
null
null
null
null
IMMUNE SYSTEM
07/27/22
TCR mimic antibody (Fab fragment) in complex with AFP/HLA-A*02
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
null
Dasgupta, M., Baker, B.M.
2.547
X-RAY DIFFRACTION
0.220
0.180
false
true
IGHV5
IGLV2
Lambda
null
null
null
null
null
7re7
H
L
0
A | C
protein | peptide
NA | NA
mhc class i antigen | phe-met-asn-lys-phe-ile-tyr-glu-ile
IMMUNE SYSTEM
07/27/22
TCR mimic antibody (Fab fragment) in complex with AFP/HLA-A*02
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Dasgupta, M., Baker, B.M.
2.547
X-RAY DIFFRACTION
0.220
0.180
false
true
IGHV5
IGLV2
Lambda
null
null
null
null
null
7re9
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/27/22
TCR mimic antibody (Fab fragment)
Homo sapiens
homo sapiens
homo sapiens
null
Dasgupta, M., Baker, B.M.
2.77
X-RAY DIFFRACTION
0.267
0.223
false
true
IGHV5
IGLV2
Lambda
null
null
null
null
null
7re9
A
B
0
null
null
null
null
IMMUNE SYSTEM
07/27/22
TCR mimic antibody (Fab fragment)
Homo sapiens
homo sapiens
homo sapiens
null
Dasgupta, M., Baker, B.M.
2.77
X-RAY DIFFRACTION
0.267
0.223
false
true
IGHV5
IGLV2
Lambda
null
null
null
null
null
7sk7
D
C
0
B | A
protein | protein
NA | NA
stromal cell-derived factor 1 | atypical chemokine receptor 3
SIGNALING PROTEIN/IMMUNE SYSTEM
07/27/22
Cryo-EM structure of human ACKR3 in complex with CXCL12, a small molecule partial agonist CCX662, and an extracellular Fab
Homo sapiens; Lama glama
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7sk7
K
null
0
null
null
null
null
SIGNALING PROTEIN/IMMUNE SYSTEM
07/27/22
Cryo-EM structure of human ACKR3 in complex with CXCL12, a small molecule partial agonist CCX662, and an extracellular Fab
Homo sapiens; Lama glama
lama glama
null
null
Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7xt8
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/27/22
Serotonin 4 (5-HT4) receptor-Gs-Nb35 complex
Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens
Huang, S., Xu, P., Shen, D.D., Simon, I.A., Mao, C., Tan, Y., Zhang, H., Harpsoe, K., Li, H., Zhang, Y., You, C., Yu, X., Jiang, Y., Zhang, Y., Gloriam, D.E., Xu, H.E.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7xta
E
e
0
A | B | G
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2
MEMBRANE PROTEIN
07/27/22
Serotonin 4 (5-HT4) receptor-Gi-scFv16 complex
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens | homo sapiens
Huang, S., Xu, P., Shen, D.D., Simon, I.A., Mao, C., Tan, Y., Zhang, H., Harpsoe, K., Li, H., Zhang, Y., You, C., Yu, X., Jiang, Y., Zhang, Y., Gloriam, D.E., Xu, H.E.
3.2
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7xtb
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/27/22
Serotonin 6 (5-HT6) receptor-Gs-Nb35 complex
Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens
Huang, S., Xu, P., Shen, D.D., Simon, I.A., Mao, C., Tan, Y., Zhang, H., Harpsoe, K., Li, H., Zhang, Y., You, C., Yu, X., Jiang, Y., Zhang, Y., Gloriam, D.E., Xu, H.E.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7xtc
N
null
0
A | B | G
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2
MEMBRANE PROTEIN
07/27/22
Serotonin 7 (5-HT7) receptor-Gs-Nb35 complex
Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens | homo sapiens
Huang, S., Xu, P., Shen, D.D., Simon, I.A., Mao, C., Tan, Y., Zhang, H., Harpsoe, K., Li, H., Zhang, Y., You, C., Yu, X., Jiang, Y., Zhang, Y., Gloriam, D.E., Xu, H.E.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7ums
4
5
0
1 | U
protein | protein
NA | NA
outer capsid protein vp5* | outer capsid protein vp8*
VIRUS
01/08/09
Structure of the VP5*/VP8* assembly from the human rotavirus strain CDC-9 in complex with antibody 41 - Upright conformation
Homo sapiens; Rotavirus
homo sapiens
homo sapiens
rotavirus | rotavirus
Jenni, S., Zongli, L., Wang, Y., Bessey, T., Salgado, E.N., Schmidt, A.G., Greenberg, H.B., Jiang, B., Harrison, S.C.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
7ums
6
7
0
2 | T
protein | protein
NA | NA
outer capsid protein vp5* | outer capsid protein vp8*
VIRUS
01/08/09
Structure of the VP5*/VP8* assembly from the human rotavirus strain CDC-9 in complex with antibody 41 - Upright conformation
Homo sapiens; Rotavirus
homo sapiens
homo sapiens
rotavirus | rotavirus
Jenni, S., Zongli, L., Wang, Y., Bessey, T., Salgado, E.N., Schmidt, A.G., Greenberg, H.B., Jiang, B., Harrison, S.C.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
8dao
C
D
0
I
peptide
null
spike protein s2 fusion peptide
IMMUNE SYSTEM
07/27/22
Crystal structure of SARS-CoV-2 spike stem fusion peptide in complex with neutralizing antibody COV44-79
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Lin, T.H., Lee, C.C.D., Yuan, M., Wilson, I.A.
2.8
X-RAY DIFFRACTION
0.284
0.231
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8dao
A
B
0
J
peptide
null
spike protein s2 fusion peptide
IMMUNE SYSTEM
07/27/22
Crystal structure of SARS-CoV-2 spike stem fusion peptide in complex with neutralizing antibody COV44-79
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Lin, T.H., Lee, C.C.D., Yuan, M., Wilson, I.A.
2.8
X-RAY DIFFRACTION
0.284
0.231
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7t0w
H
L
0
D | C
protein | protein
NA | NA
gamma-aminobutyric acid receptor subunit alpha-1 | gamma-aminobutyric acid receptor subunit beta-2
MEMBRANE PROTEIN/IMMUNE SYSTEM
01/08/09
Complex of GABA-A synaptic receptor with autoimmune antibody Fab115
Homo sapiens
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Noviello, C.M., Hibbs, R.E., Kreye, J., Teng, J., Pruss, H.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
7t0z
H
L
0
D | E
protein | protein
NA | NA
gamma-aminobutyric acid receptor subunit alpha-1 | gamma-aminobutyric acid receptor subunit gamma-2
MEMBRANE PROTEIN/IMMUNE SYSTEM
01/08/09
Complex of GABA-A synaptic receptor with autoimmune antibody Fab175
Homo sapiens
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Noviello, C.M., Hibbs, R.E., Kreye, J., Teng, J., Pruss, H.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7ozt
A
null
0
B
protein
null
unknown
CELL CYCLE
01/08/09
Nanobodies restore stability to cancer-associated mutants of tumor suppressor protein p16INK4a
Homo sapiens; Lama glama
null
null
null
Pastok, M.W., Burbidge, O., Itzhaki, L., Endicott, J.A., Noble, M.E.M.
1.74
X-RAY DIFFRACTION
0.209
0.180
false
false
IGHV1
null
null
null
null
null
null
null
7fgj
H
L
0
C
peptide
null
vqilnk
IMMUNE SYSTEM
07/27/22
The cross-reaction complex structure with VQILNK peptide and the tau antibody's Fab domain.
Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Tsuchida, T., Tsuchiya, T., Miyamoto, K., In, Y., Minoura, K., Taniguchi, T., Ishida, T., Tomoo, K.
1.89
X-RAY DIFFRACTION
0.262
0.196
false
false
IGHV1
IGLV3
Lambda
null
null
null
null
null
7fgk
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/27/22
The Fab antibody single structure against tau protein.
Mus musculus
mus musculus
mus musculus
null
Tsuchida, T., Susa, K., Kibiki, T., Tsuchiya, T., Miyamoto, K., In, Y., Minoura, K., Taniguchi, T., Ishida, T., Tomoo, K.
2.3
X-RAY DIFFRACTION
0.299
0.199
false
false
IGHV1
IGLV3
Lambda
null
null
null
null
null
7fgl
H
L
0
C
peptide
null
vqivyk
IMMUNE SYSTEM
07/27/22
The complex structure of PHF core domain peptide of tau, VQIVYK, and antibody's Fab domain.
Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Tsuchida, T., Tsuchiya, T., Miyamoto, K., In, Y., Minoura, K., Taniguchi, T., Ishida, T., Tomoo, K.
2.1
X-RAY DIFFRACTION
0.270
0.200
false
false
IGHV1
IGLV3
Lambda
null
null
null
null
null
7fgr
H
L
0
C
peptide
null
vqifnk
IMMUNE SYSTEM
07/27/22
The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain.
Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Tsuchida, T., Tsuchiya, T., Miyamoto, K., In, Y., Minoura, K., Taniguchi, T., Ishida, T., Tomoo, K.
2.2
X-RAY DIFFRACTION
0.272
0.200
false
false
IGHV1
IGLV3
Lambda
null
null
null
null
null
7noz
R
null
0
D | C
protein | protein
NA | NA
properdin | properdin
IMMUNE SYSTEM
07/27/22
Structure of the nanobody stablized properdin bound alternative pathway proconvertase C3b:FB:FP
Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens
Lorenzen, J., Pedersen, D.V., Andersen, G.R.
3.9
X-RAY DIFFRACTION
0.265
0.249
false
true
IGHV1
null
null
null
null
null
null
null
7qe5
B
null
0
A
protein
null
sialic acid trap transporter permease protein siat
TRANSPORT PROTEIN
07/27/22
Structure of the membrane domains of the sialic acid TRAP transporter HiSiaQM from Haemophilus influenzae
Haemophilus influenzae; Vicugna pacos
vicugna pacos
null
haemophilus influenzae
Peter, M.F., Hagelueken, G.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7sk3
D
C
0
B
protein
null
stromal cell-derived factor 1
SIGNALING PROTEIN/IMMUNE SYSTEM
07/27/22
Cryo-EM structure of ACKR3 in complex with CXCL12, an intracellular Fab, and an extracellular Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7sk3
F
E
0
A
protein
null
atypical chemokine receptor 3
SIGNALING PROTEIN/IMMUNE SYSTEM
07/27/22
Cryo-EM structure of ACKR3 in complex with CXCL12, an intracellular Fab, and an extracellular Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7sk4
D
C
0
B
protein
null
stromal cell-derived factor 1
SIGNALING PROTEIN/IMMUNE SYSTEM
07/27/22
Cryo-EM structure of ACKR3 in complex with chemokine N-terminal mutant CXCL12_LRHQ, an intracellular Fab, and an extracellular Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7sk4
F
E
0
A
protein
null
atypical chemokine receptor 3
SIGNALING PROTEIN/IMMUNE SYSTEM
07/27/22
Cryo-EM structure of ACKR3 in complex with chemokine N-terminal mutant CXCL12_LRHQ, an intracellular Fab, and an extracellular Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7sk5
F
E
0
A
protein
null
atypical chemokine receptor 3
SIGNALING PROTEIN/IMMUNE SYSTEM
07/27/22
Cryo-EM structure of ACKR3 in complex with CXCL12 and an intracellular Fab
Homo sapiens; Lama glama
homo sapiens
homo sapiens
homo sapiens
Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7sk5
K
null
0
null
null
null
null
SIGNALING PROTEIN/IMMUNE SYSTEM
07/27/22
Cryo-EM structure of ACKR3 in complex with CXCL12 and an intracellular Fab
Homo sapiens; Lama glama
lama glama
null
null
Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7sk6
F
E
0
A
protein
null
atypical chemokine receptor 3
SIGNALING PROTEIN
07/27/22
Cryo-EM structure of human ACKR3 in complex with chemokine N-terminal mutant CXCL12_LRHQ and an intracellular Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.
4.0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7sk8
D
C
0
B
protein
null
stromal cell-derived factor 1
SIGNALING PROTEIN/IMMUNE SYSTEM
07/27/22
Cryo-EM structure of human ACKR3 in complex with CXCL12, a small molecule partial agonist CCX662, an extracellular Fab, and an intracellular Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7sk8
F
E
0
A
protein
null
atypical chemokine receptor 3
SIGNALING PROTEIN/IMMUNE SYSTEM
07/27/22
Cryo-EM structure of human ACKR3 in complex with CXCL12, a small molecule partial agonist CCX662, an extracellular Fab, and an intracellular Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7sk9
F
E
0
A
protein
null
atypical chemokine receptor 3
SIGNALING PROTEIN/IMMUNE SYSTEM
07/27/22
Cryo-EM structure of human ACKR3 in complex with a small molecule partial agonist CCX662, and an intracellular Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7w0l
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/27/22
Cryo-EM structure of a dimeric GPCR-Gi complex with small molecule
Escherichia coli; Homo sapiens; Trichoplusia ni
homo sapiens
null
homo sapiens | homo sapiens
Yue, Y., Liu, L.E., Wu, L.J., Xu, F., Hanson, M.
3.57
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7w0m
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/27/22
Cryo-EM structure of a monomeric GPCR-Gi complex with small molecule
Escherichia coli; Homo sapiens
homo sapiens
null
homo sapiens | homo sapiens
Xu, F., Yue, Y., Liu, L.E., Wu, L.J., Hanson, M.
3.71
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7w0n
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/27/22
Cryo-EM structure of a dimeric GPCR-Gi complex with peptide
Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
null
homo sapiens | homo sapiens
Xu, F., Yue, Y., Wu, L.J., Liu, L.E., Hanson, M.
4.21
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7w0o
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/27/22
Cryo-EM structure of a monomeric GPCR-Gi complex with peptide
Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
null
homo sapiens | homo sapiens
Xu, F., Yue, Y., Liu, L.E., Wu, L.J., Hanson, M.
3.78
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7w0p
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/27/22
Cryo-EM structure of a GPCR-Gi complex with peptide
Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
null
homo sapiens | homo sapiens
Xu, F., Yue, Y., Liu, L.E., Wu, L.J., Hanson, M.
3.16
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7xtp
C
null
0
A
protein
null
eukaryotic translation initiation factor 4e
RNA BINDING PROTEIN
07/27/22
eIF4E in Complex with a Disulphide-Free Autonomous VH Domain
Homo sapiens
homo sapiens
null
homo sapiens
Brown, C.J., Frosi, Y., Jiang, S., Lin, Y.C.
1.828
X-RAY DIFFRACTION
0.259
0.226
false
true
IGHV3
null
null
null
null
null
null
null
7xtp
D
null
0
B
protein
null
eukaryotic translation initiation factor 4e
RNA BINDING PROTEIN
07/27/22
eIF4E in Complex with a Disulphide-Free Autonomous VH Domain
Homo sapiens
homo sapiens
null
homo sapiens
Brown, C.J., Frosi, Y., Jiang, S., Lin, Y.C.
1.828
X-RAY DIFFRACTION
0.259
0.226
false
true
IGHV3
null
null
null
null
null
null
null
8d36
H
L
0
F
peptide
null
spike protein s2 fusion peptide
IMMUNE SYSTEM
07/27/22
Crystal structure of SARS-CoV-2 fusion peptide in complex with neutralizing antibody COV44-62
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Yuan, M., Lee, C.C.D., Wilson, I.A.
1.45
X-RAY DIFFRACTION
0.219
0.197
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
8d6z
A
B
0
H
peptide
null
spike protein s2 fusion peptide
IMMUNE SYSTEM
07/27/22
Crystal structure of SARS-CoV-2 spike stem fusion peptide in complex with neutralizing antibody COV91-27
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Lee, C.C.D., Lin, T.H., Yuan, M., Wilson, I.A.
2.3
X-RAY DIFFRACTION
0.279
0.235
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
8d6z
C
D
0
K
peptide
null
spike protein s2 fusion peptide
IMMUNE SYSTEM
07/27/22
Crystal structure of SARS-CoV-2 spike stem fusion peptide in complex with neutralizing antibody COV91-27
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Lee, C.C.D., Lin, T.H., Yuan, M., Wilson, I.A.
2.3
X-RAY DIFFRACTION
0.279
0.235
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
8d6z
E
F
0
J
peptide
null
spike protein s2 fusion peptide
IMMUNE SYSTEM
07/27/22
Crystal structure of SARS-CoV-2 spike stem fusion peptide in complex with neutralizing antibody COV91-27
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Lee, C.C.D., Lin, T.H., Yuan, M., Wilson, I.A.
2.3
X-RAY DIFFRACTION
0.279
0.235
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
8d6z
G
I
0
L
peptide
null
spike protein s2 fusion peptide
IMMUNE SYSTEM
07/27/22
Crystal structure of SARS-CoV-2 spike stem fusion peptide in complex with neutralizing antibody COV91-27
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Lee, C.C.D., Lin, T.H., Yuan, M., Wilson, I.A.
2.3
X-RAY DIFFRACTION
0.279
0.235
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
8dcr
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
07/27/22
Cryo-EM structure of dobutamine-bound beta1-adrenergic receptor in complex with heterotrimeric Gs-protein
Bos taurus; Lama glama; Meleagris gallopavo
lama glama
null
bos taurus | bos taurus
Su, M., Paknejad, N., Hite, R.K., Huang, X.Y.
2.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
8dcs
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
07/27/22
Cryo-EM structure of cyanopindolol-bound beta1-adrenergic receptor in complex with heterotrimeric Gs-protein
Bos taurus; Lama glama; Meleagris gallopavo
lama glama
null
bos taurus | bos taurus
Su, M., Paknejad, N., Hite, R.K., Huang, X.Y.
2.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7skz
H
L
0
A
peptide
null
pro-ser-lys-arg-ser-phe-ile-glu-asp-leu-leu-phe-asn
VIRAL PROTEIN/IMMUNE SYSTEM
07/20/22
Crystal Structure of VN01H1 Fab in complex with SARS-CoV-2 S fusion peptide
mammal environmental sample; SYNTHETIC CONSTRUCT
mammal environmental sample
mammal environmental sample
severe acute respiratory syndrome coronavirus2
Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
1.86
X-RAY DIFFRACTION
0.234
0.199
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7sl5
A
B
0
C
peptide
null
pro-ser-lys-arg-ser-phe-ile-glu-asp-leu-leu-phe-asn
VIRAL PROTEIN/IMMUNE SYSTEM
07/20/22
Crystal Structure of VP12E7 Fab in complex with SARS-CoV-2 S fusion peptide
mammal environmental sample; SYNTHETIC CONSTRUCT
mammal environmental sample
mammal environmental sample
severe acute respiratory syndrome coronavirus2
Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.5
X-RAY DIFFRACTION
0.238
0.195
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7sl5
D
E
0
F
peptide
null
pro-ser-lys-arg-ser-phe-ile-glu-asp-leu-leu-phe-asn
VIRAL PROTEIN/IMMUNE SYSTEM
07/20/22
Crystal Structure of VP12E7 Fab in complex with SARS-CoV-2 S fusion peptide
mammal environmental sample; SYNTHETIC CONSTRUCT
mammal environmental sample
mammal environmental sample
severe acute respiratory syndrome coronavirus2
Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.5
X-RAY DIFFRACTION
0.238
0.195
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7sl5
G
H
0
I
peptide
null
pro-ser-lys-arg-ser-phe-ile-glu-asp-leu-leu-phe-asn
VIRAL PROTEIN/IMMUNE SYSTEM
07/20/22
Crystal Structure of VP12E7 Fab in complex with SARS-CoV-2 S fusion peptide
mammal environmental sample; SYNTHETIC CONSTRUCT
mammal environmental sample
mammal environmental sample
severe acute respiratory syndrome coronavirus2
Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.5
X-RAY DIFFRACTION
0.238
0.195
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7sl5
J
K
0
L
peptide
null
pro-ser-lys-arg-ser-phe-ile-glu-asp-leu-leu-phe-asn
VIRAL PROTEIN/IMMUNE SYSTEM
07/20/22
Crystal Structure of VP12E7 Fab in complex with SARS-CoV-2 S fusion peptide
mammal environmental sample; SYNTHETIC CONSTRUCT
mammal environmental sample
mammal environmental sample
severe acute respiratory syndrome coronavirus2
Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.5
X-RAY DIFFRACTION
0.238
0.195
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7u9g
G
D
0
B
protein
null
glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/20/22
Rabies virus glycoprotein pre-fusion trimer in complex with neutralizing antibody RVA122
Homo sapiens; Rabies virus
homo sapiens
homo sapiens
rabies virus
Callaway, H.M., Zyla, D., Larrous, F., Dias de Melo, G., Hastie, K.M., Avalos, R.D., Agarwal, A., Bouhry, H., Corti, D., Saphire, E.O.
3.39
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGLV1
Lambda
null
null
null
null
null
7u9g
H
E
0
C
protein
null
glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/20/22
Rabies virus glycoprotein pre-fusion trimer in complex with neutralizing antibody RVA122
Homo sapiens; Rabies virus
homo sapiens
homo sapiens
rabies virus
Callaway, H.M., Zyla, D., Larrous, F., Dias de Melo, G., Hastie, K.M., Avalos, R.D., Agarwal, A., Bouhry, H., Corti, D., Saphire, E.O.
3.39
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGLV1
Lambda
null
null
null
null
null
7u9g
I
F
0
A
protein
null
glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/20/22
Rabies virus glycoprotein pre-fusion trimer in complex with neutralizing antibody RVA122
Homo sapiens; Rabies virus
homo sapiens
homo sapiens
rabies virus
Callaway, H.M., Zyla, D., Larrous, F., Dias de Melo, G., Hastie, K.M., Avalos, R.D., Agarwal, A., Bouhry, H., Corti, D., Saphire, E.O.
3.39
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGLV1
Lambda
null
null
null
null
null
7um5
E
e
0
B | C
protein | protein
NA | NA
minigo protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/20/22
CryoEM structure of Go-coupled 5-HT5AR in complex with 5-CT
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens
Zhang, S., Fay, J.F., Roth, B.L.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7um6
E
e
0
B | C
protein | protein
NA | NA
minigo protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/20/22
CryoEM structure of Go-coupled 5-HT5AR in complex with Lisuride
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens
Zhang, S., Fay, J.F., Roth, B.L.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7um7
E
e
0
B | C
protein | protein
NA | NA
minigo protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/20/22
CryoEM structure of Go-coupled 5-HT5AR in complex with Methylergometrine
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens
Zhang, S., Fay, J.F., Roth, B.L.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null