pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
354 values
r_factor
stringclasses
342 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
7ura
H
L
0
A
protein
null
isoform 2 of protein-serine o-palmitoleoyltransferaseporcupine
TRANSFERASE/TRANSFERASE INHIBITOR
07/20/22
Human PORCN in complex with Palmitoleoyl-CoA
Homo sapiens; Mus musculus
mus musculus
mus musculus
homo sapiens
Liu, Y., Qi, X., Li, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV12
Kappa
null
null
null
null
null
7urc
H
L
0
A
protein
null
isoform 2 of protein-serine o-palmitoleoyltransferaseporcupine
TRANSFERASE/TRANSFERASE INHIBITOR
07/20/22
Human PORCN in complex with LGK974
Homo sapiens; Mus musculus
mus musculus
mus musculus
homo sapiens
Liu, Y., Qi, X., Li, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV12
Kappa
null
null
null
null
null
7urd
H
L
0
A
protein
null
isoform 2 of protein-serine o-palmitoleoyltransferaseporcupine
TRANSFERASE/TRANSFERASE INHIBITOR
07/20/22
Human PORCN in complex with LGK974 and WNT3A peptide
Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Liu, Y., Qi, X., Li, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV12
Kappa
null
null
null
null
null
7ure
H
L
0
A
protein
null
isoform 2 of protein-serine o-palmitoleoyltransferaseporcupine
TRANSFERASE/TRANSFERASE INHIBITOR
07/20/22
Human PORCN in complex with palmitoleoylated WNT3A peptide
Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Liu, Y., Qi, X., Li, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV12
Kappa
null
null
null
null
null
7urf
O
P
0
A
protein
null
protein-cysteine n-palmitoyltransferase hhat
TRANSFERASE/TRANSFERASE INHIBITOR
07/20/22
Human HHAT H379C in complex with SHH N-terminal peptide
Homo sapiens; Mus musculus
mus musculus
mus musculus
homo sapiens
Liu, Y., Qi, X., Li, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV9
IGKV1
Kappa
null
null
null
null
null
7vpy
A
null
0
null
null
null
null
IMMUNE SYSTEM
07/20/22
Crystal structure of the neutralizing nanobody P86 against SARS-CoV-2
Vicugna pacos
vicugna pacos
null
null
Maeda, R., Fujita, J., Konishi, Y., Kazuma, Y., Yamazaki, H., Anzai, I., Yamaguchi, K., Kasai, K., Nagata, K., Yamaoka, Y., Miyakawa, K., Ryo, A., Shirakawa, K., Makino, F., Matsuura, Y., Inoue, T., Imura, A., Namba, K., Takaori-Kondo, A.
1.6
X-RAY DIFFRACTION
0.213
0.177
false
true
IGHV1
null
null
null
null
null
null
null
7vpy
B
null
0
null
null
null
null
IMMUNE SYSTEM
07/20/22
Crystal structure of the neutralizing nanobody P86 against SARS-CoV-2
Vicugna pacos
vicugna pacos
null
null
Maeda, R., Fujita, J., Konishi, Y., Kazuma, Y., Yamazaki, H., Anzai, I., Yamaguchi, K., Kasai, K., Nagata, K., Yamaoka, Y., Miyakawa, K., Ryo, A., Shirakawa, K., Makino, F., Matsuura, Y., Inoue, T., Imura, A., Namba, K., Takaori-Kondo, A.
1.6
X-RAY DIFFRACTION
0.213
0.177
false
true
IGHV1
null
null
null
null
null
null
null
7vq0
D
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/20/22
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Maeda, R., Fujita, J., Konishi, Y., Kazuma, Y., Yamazaki, H., Anzai, I., Yamaguchi, K., Kasai, K., Nagata, K., Yamaoka, Y., Miyakawa, K., Ryo, A., Shirakawa, K., Makino, F., Matsuura, Y., Inoue, T., Imura, A., Namba, K., Takaori-Kondo, A.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7vq0
E
null
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/20/22
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Maeda, R., Fujita, J., Konishi, Y., Kazuma, Y., Yamazaki, H., Anzai, I., Yamaguchi, K., Kasai, K., Nagata, K., Yamaoka, Y., Miyakawa, K., Ryo, A., Shirakawa, K., Makino, F., Matsuura, Y., Inoue, T., Imura, A., Namba, K., Takaori-Kondo, A.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7vq0
F
null
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/20/22
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Maeda, R., Fujita, J., Konishi, Y., Kazuma, Y., Yamazaki, H., Anzai, I., Yamaguchi, K., Kasai, K., Nagata, K., Yamaoka, Y., Miyakawa, K., Ryo, A., Shirakawa, K., Makino, F., Matsuura, Y., Inoue, T., Imura, A., Namba, K., Takaori-Kondo, A.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7wo4
D
E
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 dimer trimer )
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
7wo4
F
G
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 dimer trimer )
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
7wo4
H
I
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 dimer trimer )
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
7wo4
M
N
0
K
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 dimer trimer )
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
7wo4
O
P
0
J
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 dimer trimer )
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
7wo4
Q
R
0
L
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 dimer trimer )
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
7wo5
D
E
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 trimer)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
7wo5
F
G
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 trimer)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
7wo5
H
I
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 trimer)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
7wo7
A
B
0
C
protein
null
spike protein s1
VIRAL PROTEIN
07/20/22
Locally refined region of SARS-CoV-2 Spike in complex with IgG 553-15
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
7woa
D
B
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-60 (1-up trimer)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7woa
F
G
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-60 (1-up trimer)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7wob
D
B
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-60 (2-up trimer)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7wob
F
G
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-60 (2-up trimer)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7wob
H
I
0
E
protein
null
spike glycoprotein
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Spike in complex with IgG 553-60 (2-up trimer)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7woc
A
B
0
C
protein
null
spike protein s1
VIRAL PROTEIN
07/20/22
S-mAb60 NRAb1 local-refined map"" into ""Locally refined region of SARS-CoV-2 Spike in complex with IgG 553-60
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7wog
A
B
0
C
protein
null
spike protein s1
VIRAL PROTEIN
07/20/22
SARS-CoV-2 Omicron S monomer complexed with 553-49
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV6
Lambda
null
null
null
null
null
7wp0
H
L
0
F
protein
null
spike protein s1
IMMUNE SYSTEM/VIRAL PROTEIN
07/20/22
Cryo-EM structure of SARS-CoV-2 Delta S6P trimer in complex with neutralizing antibody VacW-209 (local refinement)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zheng, Q., Sun, H., Ju, B., Zhang, Z., Li, S., Xia, N.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
7wp2
H
L
0
F
protein
null
spike protein s1
IMMUNE SYSTEM/VIRAL PROTEIN
07/20/22
Cryo-EM structure of SARS-CoV-2 C.1.2 S6P trimer in complex with neutralizing antibody VacW-209 (local refinement)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zheng, Q., Sun, H., Ju, B., Zhang, Z., Li, S., Xia, N.
3.52
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
7xou
N
null
0
A | B
protein | protein
NA | NA
isoform gnas-2 of guanine nucleotide-binding protein g(s)subunit alpha isoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
NEUROPEPTIDE
07/20/22
Structural insights into human brain gut peptide cholecystokinin receptors
Homo sapiens; SYNTHETIC CONSTRUCT
synthetic construct
null
homo sapiens | homo sapiens
Ding, Y., Zhang, H., Liao, Y., Chen, L., Ji, S.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7xov
N
null
0
A | B
protein | protein
NA | NA
isoform gnas-2 of guanine nucleotide-binding protein g(s)subunit alpha isoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
NEUROPEPTIDE
07/20/22
Structural insights into human brain gut peptide cholecystokinin receptors
Homo sapiens; SYNTHETIC CONSTRUCT
synthetic construct
null
homo sapiens | homo sapiens
Ding, Y., Zhang, H., Liao, Y., Chen, L., Ji, S.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7xow
E
e
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(q) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
NEUROPEPTIDE
07/20/22
Structural insights into human brain gut peptide cholecystokinin receptors
Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens
Ding, Y., Zhang, H., Liao, Y., Chen, L., Ji, S.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7y12
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
07/20/22
Cryo-EM structure of MrgD-Gi complex with beta-alanine
Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
synthetic construct
null
homo sapiens | mus musculus
Suzuki, S., Iida, M., Kawamoto, A., Oshima, A.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7y15
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
07/20/22
Cryo-EM structure of apo-state MrgD-Gi complex
Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
synthetic construct
null
homo sapiens | mus musculus
Suzuki, S., Iida, M., Kawamoto, A., Oshima, A.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7fbi
H
L
0
A
protein
null
envelope glycoprotein b
VIRAL PROTEIN
07/13/22
Cryo-EM structure of EBV gB in complex with nAbs 3A3 and 3A5
Epstein-Barr virus (strain GD1); Oryctolagus cuniculus
oryctolagus cuniculus
oryctolagus cuniculus
epstein-barr virus (strain gd1)
Zheng, Q., Li, S., Zha, Z., Hong, J., Chen, Y., Zhang, X.
3.9
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
7fbi
N
M
0
A
protein
null
envelope glycoprotein b
VIRAL PROTEIN
07/13/22
Cryo-EM structure of EBV gB in complex with nAbs 3A3 and 3A5
Epstein-Barr virus (strain GD1); Oryctolagus cuniculus
oryctolagus cuniculus
oryctolagus cuniculus
epstein-barr virus (strain gd1)
Zheng, Q., Li, S., Zha, Z., Hong, J., Chen, Y., Zhang, X.
3.9
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
7rpt
A
B
0
null
null
null
null
ANTIVIRAL PROTEIN
07/13/22
Crystal Structure of Protective Human Antibody 3A6 Fab Against Ebola Virus
Homo sapiens
homo sapiens
homo sapiens
null
Salie, Z.L., Saphire, E.O., Davis, C.W., Ahmed, R.
2.5
X-RAY DIFFRACTION
0.254
0.198
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
7rpt
C
D
0
null
null
null
null
ANTIVIRAL PROTEIN
07/13/22
Crystal Structure of Protective Human Antibody 3A6 Fab Against Ebola Virus
Homo sapiens
homo sapiens
homo sapiens
null
Salie, Z.L., Saphire, E.O., Davis, C.W., Ahmed, R.
2.5
X-RAY DIFFRACTION
0.254
0.198
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
7rpt
E
F
0
null
null
null
null
ANTIVIRAL PROTEIN
07/13/22
Crystal Structure of Protective Human Antibody 3A6 Fab Against Ebola Virus
Homo sapiens
homo sapiens
homo sapiens
null
Salie, Z.L., Saphire, E.O., Davis, C.W., Ahmed, R.
2.5
X-RAY DIFFRACTION
0.254
0.198
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
7rpt
G
H
0
null
null
null
null
ANTIVIRAL PROTEIN
07/13/22
Crystal Structure of Protective Human Antibody 3A6 Fab Against Ebola Virus
Homo sapiens
homo sapiens
homo sapiens
null
Salie, Z.L., Saphire, E.O., Davis, C.W., Ahmed, R.
2.5
X-RAY DIFFRACTION
0.254
0.198
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
7rpu
A
B
0
P
peptide
null
gp2 epitope peptide
ANTIVIRAL PROTEIN
07/13/22
Crystal Structure of Protective Human Antibody 3A6 Fab Against Ebola Virus with GP Stalk/MPER Epitope Peptide
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
zaire ebolavirus (strain eckron-76)
Salie, Z.L., Saphire, E.O., Davis, C.W., Ahmed, R.
1.27
X-RAY DIFFRACTION
0.160
0.141
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
7wj5
E
e
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN/IMMUNE SYSTEM
07/13/22
Cryo-EM structure of human somatostatin receptor 2 complex with its agonist somatostatin delineates the ligand binding specificity
Escherichia coli; Homo sapiens
homo sapiens
null
homo sapiens | homo sapiens
Heo, Y.S., Yoon, E.J., Jeon, Y.E., Yun, J.-H., Ishimoto, N., Woo, H., Park, S.Y., Song, J., Lee, W.T.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7wjz
A
C
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN
07/13/22
Omicron Spike bitrimer with 6m6 antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
7wjz
D
N
0
I
protein
null
spike glycoprotein
VIRAL PROTEIN
07/13/22
Omicron Spike bitrimer with 6m6 antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
7wjz
E
O
0
J
protein
null
spike glycoprotein
VIRAL PROTEIN
07/13/22
Omicron Spike bitrimer with 6m6 antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
7wjz
F
P
0
K
protein
null
spike glycoprotein
VIRAL PROTEIN
07/13/22
Omicron Spike bitrimer with 6m6 antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
7wjz
G
Q
0
L
protein
null
spike glycoprotein
VIRAL PROTEIN
07/13/22
Omicron Spike bitrimer with 6m6 antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
7wjz
H
R
0
M
protein
null
spike glycoprotein
VIRAL PROTEIN
07/13/22
Omicron Spike bitrimer with 6m6 antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
7wk0
A
B
0
C
protein
null
spike protein s1
VIRAL PROTEIN
07/13/22
Local refine of Omicron spike bitrimer with 6m6 antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
7wk0
D
E
0
F
protein
null
spike protein s1
VIRAL PROTEIN
07/13/22
Local refine of Omicron spike bitrimer with 6m6 antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
7won
H
L
0
F
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/13/22
Cryo-EM structure of SARS-CoV-2 S2P trimer in complex with neutralizing antibody VacW-209 (local refinement)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zheng, Q., Sun, H., Ju, B., Zhang, Z., Li, S., Xia, N.
3.9
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
7wp1
H
L
0
F
protein
null
spike protein s1
IMMUNE SYSTEM/VIRAL PROTEIN
07/13/22
Cryo-EM structure of SARS-CoV-2 Mu S6P trimer in complex with neutralizing antibody VacW-209 (local refinement)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zheng, Q., Sun, H., Ju, B., Zhang, Z., Li, S., Xia, N.
3.77
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
7wp5
H
L
0
F
protein
null
spikeprotein s1
IMMUNE SYSTEM/VIRAL PROTEIN
07/13/22
Cryo-EM structure of SARS-CoV-2 Omicron S6P trimer in complex with neutralizing antibody VacW-209 (local refinement)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zheng, Q., Sun, H., Ju, B., Zhang, Z., Li, S., Xia, N.
3.9
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
7x6a
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/13/22
SARS-CoV-2 BA.2 variant spike protein in complex with Fab BD55-5840
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, X., Wang, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV7
IGKV3
Kappa
null
null
null
null
null
7x6a
G
J
0
D
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/13/22
SARS-CoV-2 BA.2 variant spike protein in complex with Fab BD55-5840
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, X., Wang, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV7
IGKV3
Kappa
null
null
null
null
null
7x6a
I
K
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/13/22
SARS-CoV-2 BA.2 variant spike protein in complex with Fab BD55-5840
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, X., Wang, L.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV7
IGKV3
Kappa
null
null
null
null
null
7xbd
E
e
0
B | C
protein | protein
NA | NA
guanine nucleotide-binding protein g(q) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/13/22
Cryo-EM structure of human galanin receptor 2
Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens
Ishimoto, N., Kita, S., Park, S.Y.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7xqv
B
null
0
A
protein
null
rhoa
PROTEIN BINDING
07/13/22
The complex of nanobody Rh57 binding to GTP-bound RhoA active form
Camelus bactrianus; Rattus norvegicus
camelus bactrianus
null
rattus norvegicus
Zhang, Y.R., Liu, R., Ding, Y.
2.76
X-RAY DIFFRACTION
0.270
0.220
false
true
IGHV3
null
null
null
null
null
null
null
7z6v
X
null
0
A
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11 nanobody complex
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H., Vogirala, V.K.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z6v
Y
null
0
B
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11 nanobody complex
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H., Vogirala, V.K.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z6v
Z
null
0
C
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11 nanobody complex
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H., Vogirala, V.K.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z7x
F
null
0
C
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H6 nanobody complex
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z7x
D
null
0
A
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H6 nanobody complex
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z7x
E
null
0
B
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H6 nanobody complex
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z85
F
null
0
C
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-B5 nanobody complex
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z85
D
null
0
A
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-B5 nanobody complex
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z85
E
null
0
B
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-B5 nanobody complex
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z86
X
null
0
A
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 1Up2Down conformation
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z86
Y
null
0
B
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 1Up2Down conformation
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z86
Z
null
0
C
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 1Up2Down conformation
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z9q
D
null
0
C
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-A10 nanobody complex
Lama glama; Severe acute respiratory syndrome coronavirus 2; Tequatrovirus T4
lama glama
null
severe acute respiratory syndrome coronavirus2, tequatrovirus t4
Weckener, M., Naismith, J.H.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z9q
E
null
0
A
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-A10 nanobody complex
Lama glama; Severe acute respiratory syndrome coronavirus 2; Tequatrovirus T4
lama glama
null
severe acute respiratory syndrome coronavirus2, tequatrovirus t4
Weckener, M., Naismith, J.H.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z9q
F
null
0
B
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-A10 nanobody complex
Lama glama; Severe acute respiratory syndrome coronavirus 2; Tequatrovirus T4
lama glama
null
severe acute respiratory syndrome coronavirus2, tequatrovirus t4
Weckener, M., Naismith, J.H.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z9r
Y
null
0
B
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 2Up1Down conformation
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H.
4.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z9r
X
null
0
A
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 2Up1Down conformation
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H.
4.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7z9r
Z
null
0
C
protein
null
spike glycoprotein,fibritin
ANTIVIRAL PROTEIN
07/13/22
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 2Up1Down conformation
Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2, escherichia virus t4
Weckener, M., Naismith, J.H.
4.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7zms
K
null
0
A
protein
null
atp-dependent dna helicase q5
HYDROLASE
07/13/22
Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G4-043
Homo sapiens; Lama glama
lama glama
null
homo sapiens
Ye, M., Makola, M., Newman, J.A., Fairhead, M., MacLean, E., Krojer, T., Aitkenhead, H., Bountra, C., Gileadi, O., von Delft, F.
2.7
X-RAY DIFFRACTION
0.275
0.235
false
true
IGHV1
null
null
null
null
null
null
null
7zyi
H
L
0
A
protein
null
sodium/bile acid cotransporter
TRANSPORT PROTEIN
07/13/22
Structure of the human sodium/bile acid cotransporter (NTCP) in complex with Fab and nanobody
Homo sapiens; Lama glama; Mus musculus
mus musculus
mus musculus
homo sapiens
Liu, H., Irobalieva, R.N., Nosol, K., Locher, K.P.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7zyi
K
null
0
null
null
null
null
TRANSPORT PROTEIN
07/13/22
Structure of the human sodium/bile acid cotransporter (NTCP) in complex with Fab and nanobody
Homo sapiens; Lama glama; Mus musculus
lama glama
null
null
Liu, H., Irobalieva, R.N., Nosol, K., Locher, K.P.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7fah
H
L
0
A
protein
null
hemagglutinin
VIRAL PROTEIN/IMMUNE SYSTEM
07/06/22
Immune complex of head region of CA09 HA and neutralizing antibody 12H5
Influenza A virus (strain swl A/California/04/2009 H1N1); Mus musculus
mus musculus
mus musculus
influenza a virus (strain swla/california/04/2009 h1n1)
Li, T.T., Xue, W.H., Gu, Y., Li, S.W.
3.151
X-RAY DIFFRACTION
0.290
0.266
false
false
IGHV9
IGKV3
Kappa
null
null
null
null
null
7fah
C
D
0
B
protein
null
hemagglutinin
VIRAL PROTEIN/IMMUNE SYSTEM
07/06/22
Immune complex of head region of CA09 HA and neutralizing antibody 12H5
Influenza A virus (strain swl A/California/04/2009 H1N1); Mus musculus
mus musculus
mus musculus
influenza a virus (strain swla/california/04/2009 h1n1)
Li, T.T., Xue, W.H., Gu, Y., Li, S.W.
3.151
X-RAY DIFFRACTION
0.290
0.266
false
false
IGHV9
IGKV3
Kappa
null
null
null
null
null
7ra7
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/06/22
Crystal structure of rabbit anti-HIV Fab 11A
Oryctolagus cuniculus
oryctolagus cuniculus
oryctolagus cuniculus
null
Oyen, D., Wilson, I.A.
2.2
X-RAY DIFFRACTION
0.251
0.215
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
7ra7
A
B
0
null
null
null
null
IMMUNE SYSTEM
07/06/22
Crystal structure of rabbit anti-HIV Fab 11A
Oryctolagus cuniculus
oryctolagus cuniculus
oryctolagus cuniculus
null
Oyen, D., Wilson, I.A.
2.2
X-RAY DIFFRACTION
0.251
0.215
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
8cyd
D
null
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN
07/06/22
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-45
Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8cyd
E
null
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
07/06/22
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-45
Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8cyd
F
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
07/06/22
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-45
Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8cyj
A
null
0
R
protein
null
spike glycoprotein
VIRAL PROTEIN
07/06/22
RBD of SARS-CoV-2 Spike protein in complex with pan-sarbecovirus nanobodies 2-10, 2-67, 2-62 and 1-25
Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8cyj
B
null
0
R
protein
null
spike glycoprotein
VIRAL PROTEIN
07/06/22
RBD of SARS-CoV-2 Spike protein in complex with pan-sarbecovirus nanobodies 2-10, 2-67, 2-62 and 1-25
Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8cyj
C
null
0
R
protein
null
spike glycoprotein
VIRAL PROTEIN
07/06/22
RBD of SARS-CoV-2 Spike protein in complex with pan-sarbecovirus nanobodies 2-10, 2-67, 2-62 and 1-25
Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
8cyj
D
null
0
R
protein
null
spike glycoprotein
VIRAL PROTEIN
07/06/22
RBD of SARS-CoV-2 Spike protein in complex with pan-sarbecovirus nanobodies 2-10, 2-67, 2-62 and 1-25
Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8dcc
H
L
0
E
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/06/22
SARS-CoV-2 Receptor-Binding Domain SPEEDesign Immunogen 3 Bound to P2B-2F6 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Dickey, T.D., Tolia, N.H.
2.6
X-RAY DIFFRACTION
0.272
0.221
false
true
IGHV4
IGLV2
Lambda
null
null
null
null
null
7x1m
A
B
0
M
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/06/22
The complex structure of Omicron BA.1 RBD with BD604, S309,and S304
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Huang, M., Xie, Y.F., Qi, J.X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7x1m
C
D
0
M
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/06/22
The complex structure of Omicron BA.1 RBD with BD604, S309,and S304
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Huang, M., Xie, Y.F., Qi, J.X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7x1m
H
L
0
M
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/06/22
The complex structure of Omicron BA.1 RBD with BD604, S309,and S304
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Huang, M., Xie, Y.F., Qi, J.X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7xtq
N
null
0
A | B | G
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2
MEMBRANE PROTEIN
07/06/22
Cryo-EM structure of the R399-bound GPBAR-Gs complex
Homo sapiens; synthetic construct
synthetic construct
null
homo sapiens | homo sapiens | homo sapiens
Ma, L., Yang, F., Wu, X., Mao, C., Sun, J., Yu, X., Zhang, Y., Zhang, P.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
8cy9
D
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
07/06/22
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-23
Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8cy9
E
null
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN
07/06/22
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-23
Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8cy9
F
null
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
07/06/22
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-23
Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8cya
D
null
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
07/06/22
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-67
Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8cya
E
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
07/06/22
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-67
Lama glama; Severe acute respiratory syndrome coronavirus 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null