pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7cx4 | N | null | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 09/01/20 | Cryo-EM structure of the Evatanepag-bound EP2-Gs complex | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | homo sapiens | Qu, C., Mao, C., Xiao, P., Shen, Q., Zhong, Y., Yang, F., Shen, D., Tao, X., Zhang, H., Yan, X., Zhao, R., He, J., Guan, Y., Zhang, C., Hou, G., Zhang, P., Yu, X., Guan, Y., Sun, J., Zhang, Y. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
7rku | E | F | 0 | null | null | null | null | VIRAL PROTEIN/IMMUNE SYSTEM | 07/22/21 | Structure of the SARS-CoV-2 receptor binding domain in complex with the human neutralizing antibody Fab fragment, C022 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | null | Jette, C.A., Bjorkman, P.J., Barnes, C.O. | 3.2 | X-RAY DIFFRACTION | 0.231 | 0.188 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
4m7k | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/12/13 | Crystal structure of anti-tissue factor antibody 10H10 | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L. | 1.9 | X-RAY DIFFRACTION | 0.243 | 0.205 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
3mxv | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/07/10 | Crystal structure of fab fragment of anti-Shh 5E1 chimera | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Hymowitz, S.G., Maun, H.R. | 1.9 | X-RAY DIFFRACTION | 0.224 | 0.179 | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
2kqm | null | B | 10 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
4lde | B | null | 0 | A | protein | null | lysozyme, beta-2 adrenergic receptor | MEMBRANE PROTEIN/HYDROLASE | 06/24/13 | Structure of beta2 adrenoceptor bound to BI167107 and an engineered nanobody | ENTEROBACTERIA PHAGE T4, HOMO SAPIENS; LAMA GLAMA | lama glama | null | enterobacteria phage t4, homo sapiens | Ring, A.M., Manglik, A., Kruse, A.C., Enos, M.D., Weis, W.I., Garcia, K.C., Kobilka, B.K. | 2.79 | X-RAY DIFFRACTION | 0.256 | 0.227 | false | true | IGHV1 | null | null | null | null | null | null | null |
1ob1 | B | A | 0 | C | protein | null | major merozoite surface protein | IMMUNE SYSTEM | 01/22/03 | Crystal structure of a Fab complex whith Plasmodium falciparum MSP1-19 | PLASMODIUM FALCIPARUM; MUS MUSCULUS | mus musculus | mus musculus | plasmodium falciparum | Pizarro, J.C., Chitarra, V., Verger, D., Holm, I., Petres, S., Dartville, S., Nato, F., Longacre, S., Bentley, G.A. | 2.9 | X-RAY DIFFRACTION | 0.288 | 0.257 | false | false | IGHV9 | IGKV4 | Kappa | 0 | -12.29 | Other | 4 | 12729744 |
6pxg | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 07/26/19 | Crystal Structure of MERS-CoV neutralizing antibody G2 Fab | MUS MUSCULUS | mus musculus | mus musculus | null | Wang, N., McLellan, J.S. | 2.1 | X-RAY DIFFRACTION | 0.225 | 0.181 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7jva | H | L | 0 | A | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/20/20 | SARS-CoV-2 spike in complex with the S2A4 neutralizing antibody Fab fragment (local refinement of the receptor-binding domain and Fab variable domains) | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV6 | Lambda | null | null | null | null | null |
5mes | H | L | 0 | A | protein | null | induced myeloid leukemia cell differentiation protein mcl-1homolog,induced myeloid leukemia cell differentiation protein mcl-1 | IMMUNE SYSTEM | 11/16/16 | MCL1 FAB COMPLEX IN COMPLEX WITH COMPOUND 29 | MUS MUSCULUS; HOMO SAPIENS | homo sapiens | homo sapiens | mus musculus, homo sapiens | Hargreaves, D. | 2.24 | X-RAY DIFFRACTION | 0.230 | 0.180 | false | true | IGHV3 | IGLV1 | Lambda | 0 | -8.824642 | Unknown | null | TBD |
6xc7 | C | D | 0 | A | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 06/08/20 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CC12.3 and CR3022 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Liu, H., Wu, N.C., Zhu, X., Wilson, I.A. | 2.883 | X-RAY DIFFRACTION | 0.259 | 0.219 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5bvj | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 06/05/15 | The molecular mode of action and species specificity of canakinumab, a human monoclonal antibody neutralizing IL-1beta | HOMO SAPIENS | homo sapiens | homo sapiens | null | Rondeau, J.M. | 2.0 | X-RAY DIFFRACTION | 0.228 | 0.186 | false | true | IGHV3 | IGKV6 | Kappa | null | null | null | null | null |
5nml | H | null | 0 | null | null | null | null | IMMUNE SYSTEM | 04/06/17 | Nb36 Ser85Cys with Hg bound | LAMA GLAMA | lama glama | null | null | Hansen, S.B., Andersen, K.R., Laursen, N.S., Andersen, G.R. | 2.5 | X-RAY DIFFRACTION | 0.265 | 0.238 | false | true | IGHV1 | null | null | null | null | null | null | null |
5uk4 | i | null | 0 | I | protein | null | anti-vesicular stomatitis virus n vhh | Viral Protein/RNA/Immune System | 01/19/17 | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | VESICULAR STOMATITIS INDIANA VIRUS (STRAIN SAN JUAN); VICUGNA PACOS | vicugna pacos | null | vesicular stomatitis indiana virus (strain sanjuan) | Hanke, L., Knockenhauer, K.E., Ploegh, H.L., Schwartz, T.U. | 3.204 | X-RAY DIFFRACTION | 0.288 | 0.237 | false | false | IGHV1 | null | null | null | null | null | null | null |
6ug9 | A | B | 0 | A | carbohydrate | GAL | polysaccharide | IMMUNE SYSTEM | 09/26/19 | Complex of ch28/11 Fab and SSEA-4 (hexagonal form) | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Soliman, C., Ramsland, P.A. | 2.74 | X-RAY DIFFRACTION | 0.247 | 0.170 | false | true | IGHV2 | IGKV4 | Kappa | null | null | null | null | null |
4j1u | F | E | 0 | null | null | null | null | IMMUNE SYSTEM | 02/02/13 | Crystal structure of antibody 93F3 unstable variant | MUS MUSCULUS | mus musculus | mus musculus | null | Wang, F. | 2.58 | X-RAY DIFFRACTION | 0.276 | 0.210 | false | true | IGHV2 | IGKV8 | Kappa | null | null | null | null | null |
5wko | K | L | 0 | W | T | protein | protein | NA | NA | hemagglutinin | hemagglutinin | ANTIVIRAL PROTEIN | 07/25/17 | Crystal structure of antibody 27F3 recognizing the HA from A/California/04/2009 (H1N1) influenza virus | HOMO SAPIENS; INFLUENZA A VIRUS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Wilson, A., Lang, S., Zhu, X. | 3.492 | X-RAY DIFFRACTION | 0.268 | 0.246 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5i73 | B | C | 0 | A | protein | null | sodium-dependent serotonin transporter | MEMBRANE PROTEIN | 02/16/16 | X-ray structure of the ts3 human serotonin transporter complexed with s-citalopram at the central and allosteric sites | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Coleman, J.A., Green, E.M., Gouaux, E. | 3.24 | X-RAY DIFFRACTION | 0.275 | 0.233 | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
5jqd | C | B | 0 | null | null | null | null | IMMUNE SYSTEM | 05/04/16 | Antibody Fab Fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Zhang, Z., Prachanronarong, K., Gellatly, K., Marasco, W.A., Schiffer, C.A. | 2.591 | X-RAY DIFFRACTION | 0.242 | 0.212 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
1ic7 | H | L | 0 | Y | protein | null | lysozyme c | PROTEIN BINDING/HYDROLASE | 03/30/01 | CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD32A99A)-HEN LYSOZYME COMPLEX | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Shiroishi, M., Yokota, A., Tsumoto, K., Kondo, H., Nishimiya, Y., Horii, K., Matsushima, M., Ogasahara, K., Yutani, K., Kumagai, I. | 2.1 | X-RAY DIFFRACTION | 0.230 | 0.177 | false | true | IGHV3 | IGKV5 | Kappa | null | null | null | null | null |
5w4l | D | E | 0 | G | protein | null | clade a/e 93th057 hiv-1 gp120 core | VIRAL PROTEIN/IMMUNE SYSTEM | 06/12/17 | Crystal structure of the non-neutralizing and ADCC-potent C11-like antibody N12-i3 in complex with HIV-1 clade A/E gp120, the CD4 mimetic M48U1, and the antibody N5-i5. | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Tolbert, W.D., Gohain, N., Pazgier, M. | 2.92 | X-RAY DIFFRACTION | 0.292 | 0.231 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7eja | H | h | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(o) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 04/01/21 | Structure of the alpha2A-adrenergic receptor GoA signaling complex bound to dexmedetomidine | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | homo sapiens | Xu, J., Cao, S., Liu, Z., Du, Y. | 3.6 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6w0j | A | B | 0 | C | protein | null | ph-gated potassium channel kcsa | MEMBRANE PROTEIN | 02/29/20 | Closed-gate KcsA incubated in BaCl2/NaCl | RATTUS NORVEGICUS; STREPTOMYCES LIVIDANS | rattus norvegicus | rattus norvegicus | streptomyces lividans | Rohaim, A., Gong, L., Li, J. | 2.5 | X-RAY DIFFRACTION | 0.218 | 0.190 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
6did | K | E | 0 | G | J | protein | protein | NA | NA | envelope glycoprotein gp160 | envelope glycoprotein gp160 | VIRAL PROTEIN | 05/23/18 | HIV Env BG505 SOSIP with polyclonal Fabs from immunized rabbit #3417 post-boost#1 | HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Turner, H.L., Cottrell, C.A., Oyen, D., Wilson, I.A., Ward, A.B. | 4.71 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6lfv | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 12/03/19 | Crystal structure of PCB4scFv(hN56D) | MUS MUSCULUS | mus musculus | null | null | Nakamura, T., Yamagata, Y., Morioka, H. | 1.9 | X-RAY DIFFRACTION | 0.231 | 0.189 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6n50 | E | null | 0 | A | protein | null | metabotropic glutamate receptor 5 | SIGNALING PROTEIN | 11/20/18 | Metabotropic Glutamate Receptor 5 Extracellular Domain in Complex with Nb43 and L-quisqualic acid | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Koehl, A., Hu, H., Feng, D., Sun, B., Chu, M., Weis, W.I., Skiniotis, G., Mathiesen, J.M., Kobilka, B.K. | 3.751 | X-RAY DIFFRACTION | 0.300 | 0.266 | false | true | IGHV1 | null | null | null | null | null | null | null |
7lue | H | L | 0 | A | protein | null | fusion glycoprotein f0 | VIRAL PROTEIN/IMMUNE SYSTEM | 02/22/21 | Prefusion RSV F glycoprotein bound by neutralizing site V-directed antibody ADI-14442 | RESPIRATORY SYNCYTIAL VIRUS A2; HOMO SAPIENS | homo sapiens | homo sapiens | respiratory syncytial virus a2 | Gilman, M.S.A., McLellan, J.S. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
4ut9 | J | N | 0 | D | protein | null | envelope glycoprotein e | VIRAL PROTEIN | 07/18/14 | Crystal structure of dengue 2 virus envelope glycoprotein dimer in complex with the ScFv fragment of the broadly neutralizing human antibody EDE1 C10 | HOMO SAPIENS; DENGUE VIRUS 2 | homo sapiens | homo sapiens | dengue virus 2 | ROUVINSKI, A., GUARDADO-CALVO, P., BARBA-SPAETH, G., DUQUERROY, S., VANEY, M.C., REY, F.A. | 3.2 | X-RAY DIFFRACTION | 0.2487 | 0.1975 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
7k5y | M | m | 0 | C | B | D | protein | protein | protein | NA | NA | NA | histone h2a type 1-b/e | histone h4 | histone h2b type 1-j | NUCLEAR PROTEIN/DNA | 09/17/20 | Cryo-EM structure of a chromatosome containing human linker histone H1.4 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | homo sapiens | homo sapiens | Zhou, B.-R., Bai, Y. | 2.76 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
1ai1 | H | L | 0 | P | peptide | null | aib142 | COMPLEX (ANTIBODY/PEPTIDE) | 11/06/96 | HIV-1 V3 LOOP MIMIC | MUS MUSCULUS | mus musculus | mus musculus | null | Ghiara, J.B., Wilson, I.A. | 2.8 | X-RAY DIFFRACTION | unknown | 0.220 | false | false | IGHV12 | IGKV3 | Kappa | null | null | null | null | null |
6phf | A | B | 0 | G | protein | null | 25 kda ookinete surface antigen | IMMUNE SYSTEM | 06/25/19 | Pfs25 in complex with the human transmission blocking antibody 2587 | HOMO SAPIENS; PLASMODIUM FALCIPARUM | homo sapiens | homo sapiens | plasmodium falciparum | McLeod, B.R., Julien, J.P. | 3.1 | X-RAY DIFFRACTION | 0.267 | 0.237 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
6ksn | A | null | 0 | null | null | null | null | METAL BINDING PROTEIN | 08/24/19 | Structure of a Zn-bound camelid single domain antibody | CAMELUS DROMEDARIUS | camelus dromedarius | null | null | Kumar, S., Athreya, A., Penmatsa, A. | 2.15 | X-RAY DIFFRACTION | 0.232 | 0.193 | false | true | IGHV1 | null | null | null | null | null | null | null |
6oro | D | E | 0 | B | protein | null | rc1 variant of hiv-1 env glycoprotein gp120 | VIRAL PROTEIN/Immune System | 04/30/19 | Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch antibody Ab874NHP | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Abernathy, M.E., Gristick, H.B., Bjorkman, P.J. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
6gwp | B | null | 0 | A | protein | null | plasminogen activator inhibitor-1 | HYDROLASE | 06/25/18 | Crystal Structure of Stabilized Active Plasminogen Activator Inhibitor-1 (PAI-1-stab) in Complex with Two Inhibitory Nanobodies (VHH-2g-42, VHH-2w-64) | HOMO SAPIENS; VICUGNA PACOS | vicugna pacos | null | homo sapiens | Sillen, M., Weeks, S.D., Strelkov, S.V., Declerck, P.J. | 2.28 | X-RAY DIFFRACTION | 0.225 | 0.203 | false | true | IGHV1 | null | null | null | null | null | null | null |
4pub | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/12/14 | Crystal structure of Fab DX-2930 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Abendroth, J., Edwards, T.E., Nixon, A., Ladner, R. | 1.75 | X-RAY DIFFRACTION | 0.214 | 0.172 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7wwm | I | M | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 02/13/22 | S protein of Delta variant in complex with ZWC6 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Guo, Y.Y., Zhang, Y.Y., Zhou, Q. | 2.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6xdg | B | D | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/10/20 | Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of two neutralizing antibodies | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Franklin, M.C., Saotome, K., Romero Hernandez, A., Zhou, Y. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2h3n | null | A | 0 | B | protein | null | ig lambda-5 | IMMUNE SYSTEM | 05/22/06 | Crystal structure of a surrogate light chain (LAMBDA5 and VpreB) homodimer | HOMO SAPIENS | null | homo sapiens | homo sapiens | Bankovich, A.J., Garcia, K.C. | 2.3 | X-RAY DIFFRACTION | 0.281 | 0.228 | false | true | unknown | unknown | unknown | null | null | null | null | null |
5ukb | d | null | 0 | D | protein | null | nucleocapsid | Viral Protein/RNA/Immune System | 01/20/17 | VSV N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1004 | ESCHERICHIA COLI; VESICULAR STOMATITIS INDIANA VIRUS; VICUGNA PACOS | vicugna pacos | null | vesicular stomatitis indiana virus | Hanke, L., Knockenhauer, K.E., Ploegh, H.L., Schwartz, T.U. | 5.473 | X-RAY DIFFRACTION | 0.338 | 0.336 | false | false | IGHV1 | null | null | null | null | null | null | null |
7czd | A | null | 0 | B | protein | null | programmed cell death 1 ligand 1 | IMMUNE SYSTEM | 09/08/20 | Crystal structure of PD-L1 in complex with a VHH | LAMA GLAMA; HOMO SAPIENS | lama glama | null | homo sapiens | Wang, C. | 1.64 | X-RAY DIFFRACTION | 0.184 | 0.150 | false | true | IGHV3 | null | null | null | null | null | null | null |
4tul | H | L | 0 | I | peptide | null | peptide2 | IMMUNE SYSTEM | 06/24/14 | Crystal structure of monoclonal antibody against neuroblastoma associated antigen. | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | phage #d | Golik, P., Grudnik, P., Dubin, G., Zdzalik, M., Rokita, H., Horwacik, I. | 1.4 | X-RAY DIFFRACTION | 0.217 | 0.188 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7kgu | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 10/18/20 | Structure of 2Q1-Fab, an antibody selective for IDH2R140Q-HLA-B*07:02 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Miller, M.S., Aytenfisu, T.Y., Wright, K.M., Gabelli, S.B. | 2.4 | X-RAY DIFFRACTION | 0.269 | 0.208 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1ncb | H | L | 0 | N | protein | null | influenza a subtype n9 neuraminidase | HYDROLASE(O-GLYCOSYL) | 01/21/92 | CRYSTAL STRUCTURES OF TWO MUTANT NEURAMINIDASE-ANTIBODY COMPLEXES WITH AMINO ACID SUBSTITUTIONS IN THE INTERFACE | INFLUENZA A VIRUS; MUS MUSCULUS | mus musculus | mus musculus | influenza a virus | Tulip, W.R., Varghese, J.N., Colman, P.M. | 2.5 | X-RAY DIFFRACTION | unknown | 0.165 | false | false | IGHV9 | IGKV6 | Kappa | null | null | null | null | null |
2kqm | null | A | 8 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6p8n | B | D | 0 | A | protein | null | env outer domain eod-gt8 | IMMUNE SYSTEM | 06/07/19 | Crystal Structure of Antibody P-p1f1 in Complex with eOD-GT8 | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS | mus musculus | mus musculus | human immunodeficiency virus 1 | Weidle, C., Pancera, M. | 3.202 | X-RAY DIFFRACTION | 0.287 | 0.226 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
6mwc | C | D | 0 | B | protein | null | e2 | VIRUS/IMMUNE SYSTEM | 10/29/18 | CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-5 antibody | EASTERN EQUINE ENCEPHALITIS VIRUS; MUS MUSCULUS | mus musculus | mus musculus | eastern equine encephalitis virus | Hasan, S.S., Sun, C., Kim, A.S., Watanabe, Y., Chen, C.L., Klose, T., Buda, G., Crispin, M., Diamond, M.S., Klimstra, W.B., Rossmann, M.G. | 7.5 | ELECTRON MICROSCOPY | null | null | false | false | IGHV9 | IGLV1 | Lambda | null | null | null | null | null |
1u6a | H | L | 0 | null | null | null | null | immune system | 07/29/04 | Crystal Structure of the Broadly Neutralizing Anti-HIV Fab F105 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wilkinson, R.A., Piscitelli, C., Teintze, M., Lawrence, C.M. | 2.81 | X-RAY DIFFRACTION | 0.251 | 0.210 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
4tnw | I | O | 0 | D | protein | null | avermectin-sensitive glutamate-gated chloride channel gluclalpha | TRANSPORT PROTEIN/IMMUNE SYSTEM | 06/05/14 | C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab and POPC in a lipid-modulated conformation | CAENORHABDITIS ELEGANS; MUS MUSCULUS | mus musculus | mus musculus | caenorhabditis elegans | Althoff, T., Hibbs, R.E., Banerjee, S., Gouaux, E. | 3.2 | X-RAY DIFFRACTION | 0.251 | 0.227 | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7tm0 | I | H | 0 | A | protein | null | spike glycoprotein | VIRUS | 01/19/22 | SARS-CoV-2 S B.1.1.529 Omicron variant + S309 + S2L20 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5u3j | H | L | 0 | A | peptide | null | gp41 mper peptide | IMMUNE SYSTEM/VIRAL PROTEIN | 12/02/16 | Crystal Structure of DH511.1 Fab in Complex with HIV-1 gp41 MPER Peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Ofek, G., Wu, L., Lougheed, C.S., Williams, L.D., Nicely, N.I., Haynes, B.F. | 2.74 | X-RAY DIFFRACTION | 0.264 | 0.229 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7v69 | S | s | 0 | A | C | B | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 08/20/21 | Cryo-EM structure of a class A GPCR-G protein complex | HOMO SAPIENS | homo sapiens | null | homo sapiens | homo sapiens | homo sapiens | Wang, J.J., Wu, M., Wu, L.J., Hua, T., Liu, Z.J., Wang, T. | 3.4 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7m7w | C | D | 0 | S | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/29/21 | Antibodies to the SARS-CoV-2 receptor-binding domain that maximize breadth and resistance to viral escape | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Snell, G., Czudnochowski, N., Croll, T.I., Nix, J.C., Corti, D., Cameroni, E., Pinto, D., Beltramello, M. | 2.65 | X-RAY DIFFRACTION | 0.271 | 0.221 | false | true | IGHV5 | IGLV2 | Lambda | null | null | null | null | null |
4pir | H | null | 0 | B | protein | null | 5-hydroxytryptamine receptor 3a | TRANSPORT PROTEIN | 05/09/14 | X-ray structure of the mouse serotonin 5-HT3 receptor | MUS MUSCULUS; LAMA GLAMA | lama glama | null | mus musculus | Hassaine, G., Deluz, C., Grasso, L., Wyss, R., Tol, M.B., Hovius, R., Graff, A., Stahlberg, H., Tomizaki, T., Desmyter, A., Moreau, C., Li, X.-D., Poitevin, F., Vogel, H., Nury, H. | 3.5 | X-RAY DIFFRACTION | 0.257 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null |
2kqm | null | B | 18 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
7l56 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/21/20 | Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-43 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Rapp, M., Shapiro, L. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
5e7f | B | null | 0 | H | protein | null | major structural protein 1 | VIRAL PROTEIN | 10/12/15 | Complex between lactococcal phage Tuc2009 RBP head domain and a nanobody (L06) | CAMELUS DROMEDARIUS; LACTOCOCCUS PHAGE TUC2009 | camelus dromedarius | null | lactococcus phage tuc2009 | Legrand, P., Collins, B., Blangy, S., Murphy, J., Spinelli, S., Gutierrez, C., Richet, N., Kellenberger, C., Desmyter, A., Mahony, J., van Sinderen, D., Cambillau, C. | 2.7 | X-RAY DIFFRACTION | 0.208 | 0.194 | false | true | IGHV1 | null | null | 0 | -10.96983 | SPR | null | TBD |
3chn | A | L | 8 | null | null | null | null | IMMUNE SYSTEM | 03/10/08 | Solution structure of human secretory IgA1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING / HOMOLOGY MODEL | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5m2m | H | null | 0 | G | protein | null | tumor necrosis factor | CYTOKINE | 10/13/16 | Complex between human TNF alpha and Llama VHH3 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Cambillau, C., Spinelli, S., Desmyter, A., de Haard, H. | 2.3 | X-RAY DIFFRACTION | 0.248 | 0.211 | false | true | IGHV1 | null | null | 0 | -12.037965 | SPR | null | TBD |
6cxl | H | L | 0 | H | carbohydrate | BMA | polysaccharide | IMMUNE SYSTEM | 04/03/18 | anti-HIV-1 Fab 2G12 in complex with glycopeptide 10F5 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Stanfield, R.L., Wilson, I.A. | 3.586 | X-RAY DIFFRACTION | 0.248 | 0.219 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
2mkw | null | A | 19 | null | null | null | null | IMMUNE SYSTEM | 02/13/14 | Solution Structure of 6aJl2 and 6aJL2-R24G Amyloidogenics Light Chain Proteins | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
5b4m | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/05/16 | Crystal structure of an Fab against human influenza A | MUS MUSCULUS | mus musculus | mus musculus | null | Yuan, Y.A. | 2.4 | X-RAY DIFFRACTION | 0.338 | 0.285 | false | false | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
2kh2 | B | b | 35 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
3qnz | B | A | 0 | C | peptide | null | peptide from tubulin beta chain | IMMUNE SYSTEM | 02/09/11 | Orthorhombic form of IgG1 Fab fragment (in complex with antigenic tubulin peptide) sharing same Fv as IgA | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Trajtenberg, F., Correa, A., Buschiazzo, A. | 2.2 | X-RAY DIFFRACTION | 0.235 | 0.196 | false | false | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
6iut | H | L | 0 | A | protein | null | hemagglutinin | IMMUNE SYSTEM | 11/30/18 | Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody AVFluIgG01 | HOMO SAPIENS; INFLUENZA A VIRUS (A/ANHUI/1/2005(H5N1)) | homo sapiens | homo sapiens | influenza a virus (a/anhui/1/2005(h5n1)) | Wang, P., Zuo, Y., Sun, J., Zhang, L., Wang, X. | 2.3 | X-RAY DIFFRACTION | 0.255 | 0.205 | false | true | IGHV4 | IGLV2 | Lambda | null | null | null | null | null |
6k5d | E | F | 0 | B | protein | null | h(+)/cl(-) exchange transporter clca | MEMBRANE PROTEIN | 05/28/19 | Crystal structure of the E148N mutant CLC-ec1 in presence of 200 mM NaBr | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Park, K., Lim, H.H. | 3.203 | X-RAY DIFFRACTION | 0.262 | 0.215 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
6p9y | N | null | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 06/10/19 | PAC1 GPCR Receptor complex | HOMO SAPIENS; LAMA GLAMA; SYNTHETIC CONSTRUCT | lama glama | null | homo sapiens | homo sapiens | Belousoff, M.J., Liang, Y.L., Sexton, P., Danev, R. | 3.01 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
4l5f | H | L | 0 | E | protein | null | envelope protein | VIRAL PROTEIN, IMMUNE SYSTEM | 06/11/13 | Crystal Structure of DENV1-E106 Fab bound to DENV-1 Envelope protein DIII | DENGUE VIRUS 1; MUS MUSCULUS | mus musculus | mus musculus | dengue virus 1 | Edeling, M.A., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 2.45 | X-RAY DIFFRACTION | 0.239 | 0.190 | false | false | IGHV1 | IGKV17 | Kappa | null | null | null | null | null |
7fin | N | null | 0 | A | B | G | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | STRUCTURAL PROTEIN | 07/31/21 | Cryo-EM structure of the GIPR/GLP-1R/GCGR triagonist peptide 20-bound human GIPR-Gs complex | HOMO SAPIENS; BOS TAURUS; RATTUS NORVEGICUS; SYNTHETIC CONSTRUCT; SYNTHETIC CONSTRUCT | synthetic construct | null | bos taurus | rattus norvegicus | bos taurus | Zhao, F.h., Zhou, Q.T., Cong, Z.T., Hang, K.N., Zou, X.Y., Zhang, C., Chen, Y., Dai, A.T., Liang, A.Y., Ming, Q.Q., Wang, M., Chen, L.N., Xu, P.Y., Chang, R.L., Feng, W.B., Xia, T., Zhang, Y., Wu, B.L., Yang, D.H., Zhao, L.H., Xu, H.E., Wang, M.W. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
5esq | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 11/16/15 | Cetuximab Fab in complex with cyclic beta-alanine-linked meditope | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Bzymek, K.P., Williams, J.C. | 2.55 | X-RAY DIFFRACTION | 0.242 | 0.190 | false | true | IGHV2 | IGKV5 | Kappa | 0.000002 | -7.906995 | Unknown | null | TBD |
7m8l | H | K | 0 | B | protein | null | virion spike glycoprotein 1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/30/21 | EBOV GP bound to rEBOV-442 and rEBOV-515 Fabs | EBOLA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | ebola virus | Murin, C.D., Ward, A.B. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6c5k | A | B | 0 | A | carbohydrate | GP1 | polysaccharide | SUGAR BINDING PROTEIN | 01/16/18 | S25-23 Fab in complex with Chlamydiaceae LPS (Crystal form 2) | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Haji-Ghassemi, O., Evans, S.V. | 1.75 | X-RAY DIFFRACTION | 0.218 | 0.188 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
7mnn | K | M | 0 | B | protein | null | e3 sumo-protein ligase ranbp2 | TRANSPORT PROTEIN/Immune System | 05/01/21 | Crystal structure of the N-terminal domain of NUP358/RanBP2 (residues 1-752) T653I mutant in complex with Fab fragment | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Bley, C.J., Nie, S., Mobbs, G.W., Petrovic, S., Gres, A.T., Liu, X., Mukherjee, S., Harvey, S., Huber, F.M., Lin, D.H., Brown, B., Tang, A.W., Rundlet, E.J., Correia, A.R., Chen, S., Regmi, S.G., Stevens, T.A., Jette, C.A., Dasso, M., Patke, A., Palazzo, A.F., Kossiakoff, A.A., Hoelz, A. | 6.7 | X-RAY DIFFRACTION | 0.263 | 0.218 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2eks | B | A | 0 | C | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 03/24/07 | Crystal structure of humanized HyHEL-10 FV-HEN lysozyme complex | HOMO SAPIENS; GALLUS GALLUS | homo sapiens | homo sapiens | gallus gallus | Nakanishi, T., Tsumoto, K., Yokota, A., Kondo, H., Kumagai, I. | 2.0 | X-RAY DIFFRACTION | 0.265 | 0.221 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
1uyw | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/03/04 | Crystal Structure of the antiflavivirus Fab4g2 | MUS MUSCULUS | mus musculus | mus musculus | null | Martinez-Fleites, C., Ortiz-Lombardia, M., Taylor, E.J., Gil-Valdes, J., Chinea, G., Davies, G. | 2.0 | X-RAY DIFFRACTION | 0.21953 | 0.19943 | false | false | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
6ruv | R | null | 0 | Y | X | protein | protein | NA | NA | properdin | properdin | IMMUNE SYSTEM | 05/29/19 | Structure of the SCIN stabilized C3bBb convertase bound to Properdin and a the non-inhibitory nanobody hFPNb1 | LAMA GLAMA; HOMO SAPIENS; STAPHYLOCOCCUS AUREUS | lama glama | null | homo sapiens | homo sapiens | Pedersen, D.V., Andersen, G.R. | 6.15 | X-RAY DIFFRACTION | 0.271 | 0.242 | false | true | IGHV1 | null | null | null | null | null | null | null |
7a4t | A | null | 0 | C | B | peptide | peptide | NA | NA | gcn4 isoform 1 | gcn4 isoform 1 | DE NOVO PROTEIN | 08/20/20 | Crystal structure of the GCN coiled-coil in complex with nanobody Nb39 | LAMA GLAMA; SYNTHETIC CONSTRUCT | lama glama | null | saccharomyces cerevisiae | saccharomyces cerevisiae | Hadzi, S. | 2.124 | X-RAY DIFFRACTION | 0.243 | 0.185 | false | true | IGHV1 | null | null | null | null | null | null | null |
3qxu | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 03/02/11 | Free Structure of an Anti-Methotrexate CDR1-3 Graft VHH Antibody | LAMA GLAMA | lama glama | null | null | Fanning, S.W., Horn, J.R. | 1.8 | X-RAY DIFFRACTION | 0.214 | 0.182 | false | true | IGHV1 | null | null | null | null | null | null | null |
7lxz | H | J | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/05/21 | SARS-CoV-2 S/S2M11/S2L28 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6u1t | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/16/19 | Crystal structure of anti-Nipah virus (NiV) F 5B3 antibody Fab fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Dang, H.V., Chan, Y.P., Park, Y.J., Snijder, J., Da Silva, S.C., Vu, B., Yan, L., Feng, Y.R., Rockx, B., Geisbert, T., Mire, C., Mire, C.E., BBroder, C.C., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 1.483 | X-RAY DIFFRACTION | 0.173 | 0.137 | false | true | IGHV5 | IGKV12 | Kappa | null | null | null | null | null |
2mmx | null | A | 14 | null | null | null | null | IMMUNE SYSTEM | 03/20/14 | NMR study of 6aJL2 | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
5d1q | B | A | 0 | E | protein | null | iron-regulated surface determinant protein b | IMMUNE SYSTEM | 08/04/15 | IsdB NEAT2 bound by clone D2-06 | HOMO SAPIENS; STAPHYLOCOCCUS AUREUS (STRAIN BOVINE RF122 / ET3-1) | homo sapiens | homo sapiens | staphylococcus aureus (strain bovine rf122 /et3-1) | Deng, X. | 3.22 | X-RAY DIFFRACTION | 0.288 | 0.239 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -14.851238 | SPR | null | TBD |
1afv | H | L | 0 | A | protein | null | human immunodeficiency virus type 1 capsidprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/14/97 | HIV-1 CAPSID PROTEIN (P24) COMPLEX WITH FAB25.3 | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS | mus musculus | mus musculus | human immunodeficiency virus 1 | Momany, C., Kovari, L.C., Prongay, A.J., Keller, W., Gitti, R.K., Lee, B.M., Gorbalenya, A.E., Tong, L., Mcclure, J., Ehrlich, L.S., Summers, M.F., Carter, C., Rossmann, M.G. | 3.7 | X-RAY DIFFRACTION | 0.324 | 0.217 | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5npj | A | a | 0 | D | peptide | null | epitope peptide | VIRAL PROTEIN | 04/16/17 | Structure of the Hepatitis C virus strain JFH1 glycoprotein E2 antigenic region 532-540 bound to the single chain variable fragment of the non-neutralizing antibody DAO5 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | hepatitis c virus | Vasiliauskaite, I., Rey, F.A., Krey, T. | 1.9 | X-RAY DIFFRACTION | 0.202 | 0.186 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5c9k | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 06/27/15 | Crystal structure of a highly fibrillogenic Arg24Gly mutant of the Recombinant variable domain 6AJL2 | HOMO SAPIENS | null | homo sapiens | null | Hernandez-Santoyo, A., Rodriguez-Romero, A., Luna-Martinez, O.D., Becerril-Lujan, B. | 1.92 | X-RAY DIFFRACTION | 0.219 | 0.170 | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
6ral | C | null | 0 | B | protein | null | multidrug resistance abc transporter atp-binding andpermease protein | TRANSPORT PROTEIN | 04/06/19 | Heterodimeric ABC exporter TmrAB under turnover conditions in asymmetric unlocked return conformation | THERMUS THERMOPHILUS; VICUGNA PACOS | vicugna pacos | null | thermus thermophilus | Thomas, C., Januliene, D., Mehdipour, A.R., Hofmann, S., Hummer, G., Moeller, A., Tampe, R. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4tuo | A | B | 0 | B | carbohydrate | GAL | polysaccharide | IMMUNE SYSTEM | 06/24/14 | Crystal structure of monoclonal antibody against neuroblastoma associated antigen. | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Golik, P., Grudnik, P., Horwacik, I., Zdzalik, M., Rokita, H., Dubin, G. | 1.55 | X-RAY DIFFRACTION | 0.206 | 0.166 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3nfp | H | L | 0 | I | protein | null | interleukin-2 receptor subunit alpha | Immune system/Cytokine | 06/10/10 | Crystal structure of the Fab fragment of therapeutic antibody daclizumab in complex with IL-2Ra (CD25) ectodomain | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Yang, H., Wang, J., Du, J., Zhong, C., Guo, Y., Ding, J. | 2.86 | X-RAY DIFFRACTION | 0.301 | 0.253 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -13.05 | SPR | 25 | 20820193 |
6p3s | M | N | 0 | O | protein | null | hemagglutinin | IMMUNE SYSTEM/VIRAL PROTEIN | 05/27/20 | Crystal structure of human Fab H5.28 in complex with influenza A H5N1 Vietnam hemagglutinin head domain | HOMO SAPIENS; INFLUENZA A VIRUS (A/CHICKEN/VIETNAM/32/2004(H5N1)) | homo sapiens | homo sapiens | influenza a virus(a/chicken/vietnam/32/2004(h5n1)) | Dong, J., Crowe, J.E. | 4.0 | X-RAY DIFFRACTION | 0.326 | 0.281 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7tcc | M | N | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/23/21 | Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibodies A19-46.1 and B1-182.1 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, T., Kwong, P.D. | 3.86 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV8 | Lambda | null | null | null | null | null |
4jan | A | B | 0 | I | protein | null | envelope glycoprotein gp120 of hiv-1 clade c | viral protein/immune system | 02/18/13 | crystal structure of broadly neutralizing antibody CH103 in complex with HIV-1 gp120 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Zhou, T., Moquin, S., Zheng, A., Srivatsan, S., Kwong, P.D. | 3.15 | X-RAY DIFFRACTION | 0.256 | 0.196 | false | true | IGHV4 | IGLV3 | Lambda | 0 | -10.503274 | SPR | null | TBD |
5ifj | D | E | 0 | F | peptide | null | peptide pro-leu-gln-pro-glu-gln-pro-phe-pro | IMMUNE SYSTEM | 02/26/16 | Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPEQPFP | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | triticum aestivum | Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M. | 2.35 | X-RAY DIFFRACTION | 0.241 | 0.205 | false | true | IGHV3 | IGLV4 | Lambda | null | null | null | null | null |
1mj8 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/27/02 | High Resolution Crystal Structure Of The Fab Fragment of The Esterolytic Antibody MS6-126 | MUS MUSCULUS | mus musculus | mus musculus | null | Ruzheinikov, S.N., Muranova, T.A., Sedelnikova, S.E., Partridge, L.J., Blackburn, G.M., Murray, I.A., Kakinuma, H., Takashi, N., Shimazaki, K., Sun, J., Nishi, Y., Rice, D.W. | 1.75 | X-RAY DIFFRACTION | 0.221 | 0.155 | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
4rx4 | H | L | 0 | G | protein | null | hiv-1 clade a q842.d12 gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/08/14 | Crystal structure of VH1-46 germline-derived CD4-binding site-directed antibody 8ANC134 in complex with HIV-1 clade A Q842.d12 gp120 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Zhou, T., Acharya, P., Moquin, S., Kwong, P.D. | 3.45 | X-RAY DIFFRACTION | 0.253 | 0.208 | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
7euo | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | SIGNALING PROTEIN/IMMUNE SYSTEM | 05/18/21 | The structure of formyl peptide receptor 1 in complex with Gi and peptide agonist fMLF | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | homo sapiens | Wang, X.K., Chen, G., Liao, Q.W., Du, Y., Hu, H.L., Ye, D.Q. | 2.9 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5o0w | H | null | 0 | D | protein | null | fructose-bisphosphate aldolase | LYASE | 05/17/17 | Crystal structure of the complex between Nb474 and Trypanosoma congolense fructose-1,6-bisphosphate aldolase | TRYPANOSOMA CONGOLENSE (STRAIN IL3000); VICUGNA PACOS | vicugna pacos | null | trypanosoma congolense (strain il3000) | Pinto, J., Magez, S., Sterckx, Y. | 2.57 | X-RAY DIFFRACTION | 0.222 | 0.192 | false | true | IGHV1 | null | null | 0 | -13.822203 | SPR | null | TBD |
3qny | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 02/09/11 | Monoclinic form of human IgA1 Fab fragment, sharing same Fv as IgG | HOMO SAPIENS | homo sapiens | homo sapiens | null | Trajtenberg, F., Correa, A., Buschiazzo, A. | 2.3 | X-RAY DIFFRACTION | 0.218 | 0.187 | false | false | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
7ls9 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 02/17/21 | Cryo-EM structure of neutralizing antibody 1-57 in complex with prefusion SARS-CoV-2 spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Cerutti, G., Shapiro, L. | 3.42 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7keo | E | F | 0 | H | G | protein | protein | NA | NA | ubiquitin | ubiquitin | PROTEIN BINDING | 10/11/20 | Crystal structure of K29-linked di-ubiquitin in complex with synthetic antigen binding fragment | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Yu, Y., Zheng, Q., Erramilli, S., Pan, M., Kossiakoff, A., Liu, L., Zhao, M. | 2.9 | X-RAY DIFFRACTION | 0.282 | 0.236 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5fv2 | A | null | 0 | X | protein | null | vascular endothelial growth factor | null | 02/02/16 | Crystal structure of hVEGF in complex with VH domain antibody | HOMO SAPIENS | homo sapiens | null | homo sapiens | Chung, C., Batuwangala, T. | 3.45 | X-RAY DIFFRACTION | 0.26270 | 0.21244 | false | true | IGHV3 | null | null | 0 | -15.203792 | SPR | null | TBD |
6k2i | A | null | 1 | null | null | null | null | AFB1-BINDING PROTEIN | 05/14/19 | Solution structure of camelid nanobody Nb11 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., Li, S.L., He, T., Zhu, J., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
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