code stringlengths 51 2.34k | sequence stringlengths 186 3.94k | docstring stringlengths 11 171 |
|---|---|---|
def _rename_duplicate_tabs(self, current, name, path):
for i in range(self.count()):
if self.widget(i)._tab_name == name and self.widget(i) != current:
file_path = self.widget(i).file.path
if file_path:
parent_dir = os.path.split(os.path.abspath(
os.path.join(file_path, os.pardir)))[1]
new_name = os.path.join(parent_dir, name)
self.setTabText(i, new_name)
self.widget(i)._tab_name = new_name
break
if path:
parent_dir = os.path.split(os.path.abspath(
os.path.join(path, os.pardir)))[1]
return os.path.join(parent_dir, name)
else:
return name | module function_definition identifier parameters identifier identifier identifier identifier block for_statement identifier call identifier argument_list call attribute identifier identifier argument_list block if_statement boolean_operator comparison_operator attribute call attribute identifier identifier argument_list identifier identifier identifier comparison_operator call attribute identifier identifier argument_list identifier identifier block expression_statement assignment identifier attribute attribute call attribute identifier identifier argument_list identifier identifier identifier if_statement identifier block expression_statement assignment identifier subscript call attribute attribute identifier identifier identifier argument_list call attribute attribute identifier identifier identifier argument_list call attribute attribute identifier identifier identifier argument_list identifier attribute identifier identifier integer expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list identifier identifier expression_statement call attribute identifier identifier argument_list identifier identifier expression_statement assignment attribute call attribute identifier identifier argument_list identifier identifier identifier break_statement if_statement identifier block expression_statement assignment identifier subscript call attribute attribute identifier identifier identifier argument_list call attribute attribute identifier identifier identifier argument_list call attribute attribute identifier identifier identifier argument_list identifier attribute identifier identifier integer return_statement call attribute attribute identifier identifier identifier argument_list identifier identifier else_clause block return_statement identifier | Rename tabs whose title is the same as the name |
async def load(self, node_id=None):
if node_id is not None:
await self._load_node(node_id=node_id)
else:
await self._load_all_nodes() | module function_definition identifier parameters identifier default_parameter identifier none block if_statement comparison_operator identifier none block expression_statement await call attribute identifier identifier argument_list keyword_argument identifier identifier else_clause block expression_statement await call attribute identifier identifier argument_list | Load nodes from KLF 200, if no node_id is specified all nodes are loaded. |
def initialize_axes(self, boundary=0.05):
bs = [(self.vals[:, i].max()-self.vals[:, i].min())*boundary for i in range(3)]
self.x_lim = np.array([self.vals[:, 0].min()-bs[0], self.vals[:, 0].max()+bs[0]])
self.y_lim = np.array([self.vals[:, 1].min()-bs[1], self.vals[:, 1].max()+bs[1]])
self.z_lim = np.array([self.vals[:, 2].min()-bs[2], self.vals[:, 2].max()+bs[2]]) | module function_definition identifier parameters identifier default_parameter identifier float block expression_statement assignment identifier list_comprehension binary_operator parenthesized_expression binary_operator call attribute subscript attribute identifier identifier slice identifier identifier argument_list call attribute subscript attribute identifier identifier slice identifier identifier argument_list identifier for_in_clause identifier call identifier argument_list integer expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list list binary_operator call attribute subscript attribute identifier identifier slice integer identifier argument_list subscript identifier integer binary_operator call attribute subscript attribute identifier identifier slice integer identifier argument_list subscript identifier integer expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list list binary_operator call attribute subscript attribute identifier identifier slice integer identifier argument_list subscript identifier integer binary_operator call attribute subscript attribute identifier identifier slice integer identifier argument_list subscript identifier integer expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list list binary_operator call attribute subscript attribute identifier identifier slice integer identifier argument_list subscript identifier integer binary_operator call attribute subscript attribute identifier identifier slice integer identifier argument_list subscript identifier integer | Set up the axes with the right limits and scaling. |
def _EnsureRequesterStarted(self):
if not self._analyzer_started:
self._analyzer.start()
self._analyzer_started = True | module function_definition identifier parameters identifier block if_statement not_operator attribute identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list expression_statement assignment attribute identifier identifier true | Checks if the analyzer is running and starts it if not. |
def delete(self, event):
assert self.receiver_id == event.receiver_id
event.response = {'status': 410, 'message': 'Gone.'}
event.response_code = 410 | module function_definition identifier parameters identifier identifier block assert_statement comparison_operator attribute identifier identifier attribute identifier identifier expression_statement assignment attribute identifier identifier dictionary pair string string_start string_content string_end integer pair string string_start string_content string_end string string_start string_content string_end expression_statement assignment attribute identifier identifier integer | Mark event as deleted. |
def render(self, *args, **kwargs):
return self.doctype.render() + super().render(*args, **kwargs) | module function_definition identifier parameters identifier list_splat_pattern identifier dictionary_splat_pattern identifier block return_statement binary_operator call attribute attribute identifier identifier identifier argument_list call attribute call identifier argument_list identifier argument_list list_splat identifier dictionary_splat identifier | Override so each html page served have a doctype |
def ajax_get_service(self):
uid = self.request.form.get("uid", None)
if uid is None:
return self.error("Invalid UID", status=400)
service = self.get_object_by_uid(uid)
if not service:
return self.error("Service not found", status=404)
info = self.get_service_info(service)
return info | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute attribute attribute identifier identifier identifier identifier argument_list string string_start string_content string_end none if_statement comparison_operator identifier none block return_statement call attribute identifier identifier argument_list string string_start string_content string_end keyword_argument identifier integer expression_statement assignment identifier call attribute identifier identifier argument_list identifier if_statement not_operator identifier block return_statement call attribute identifier identifier argument_list string string_start string_content string_end keyword_argument identifier integer expression_statement assignment identifier call attribute identifier identifier argument_list identifier return_statement identifier | Returns the services information |
def Sign(self, message, use_pss=False):
precondition.AssertType(message, bytes)
if not use_pss:
padding_algorithm = padding.PKCS1v15()
else:
padding_algorithm = padding.PSS(
mgf=padding.MGF1(hashes.SHA256()), salt_length=padding.PSS.MAX_LENGTH)
return self._value.sign(message, padding_algorithm, hashes.SHA256()) | module function_definition identifier parameters identifier identifier default_parameter identifier false block expression_statement call attribute identifier identifier argument_list identifier identifier if_statement not_operator identifier block expression_statement assignment identifier call attribute identifier identifier argument_list else_clause block expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier call attribute identifier identifier argument_list call attribute identifier identifier argument_list keyword_argument identifier attribute attribute identifier identifier identifier return_statement call attribute attribute identifier identifier identifier argument_list identifier identifier call attribute identifier identifier argument_list | Sign a given message. |
def _set_zone_name(self, zoneid, name):
zoneid -= 1
data = {
'_set_zone_name': 'Set Name',
'select_zone': str(zoneid),
'zone_name': name,
}
self._controller.post(data) | module function_definition identifier parameters identifier identifier identifier block expression_statement augmented_assignment identifier integer expression_statement assignment identifier dictionary pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end call identifier argument_list identifier pair string string_start string_content string_end identifier expression_statement call attribute attribute identifier identifier identifier argument_list identifier | Private method to override zone name. |
def _context_string(context):
msg = 'Code block context:\n '
lines = ['Selective arithmetic coding bypass: {0}',
'Reset context probabilities on coding pass boundaries: {1}',
'Termination on each coding pass: {2}',
'Vertically stripe causal context: {3}',
'Predictable termination: {4}',
'Segmentation symbols: {5}']
msg += '\n '.join(lines)
msg = msg.format(((context & 0x01) > 0),
((context & 0x02) > 0),
((context & 0x04) > 0),
((context & 0x08) > 0),
((context & 0x10) > 0),
((context & 0x20) > 0))
return msg | module function_definition identifier parameters identifier block expression_statement assignment identifier string string_start string_content escape_sequence string_end expression_statement assignment identifier list string string_start string_content string_end string string_start string_content string_end string string_start string_content string_end string string_start string_content string_end string string_start string_content string_end string string_start string_content string_end expression_statement augmented_assignment identifier call attribute string string_start string_content escape_sequence string_end identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list parenthesized_expression comparison_operator parenthesized_expression binary_operator identifier integer integer parenthesized_expression comparison_operator parenthesized_expression binary_operator identifier integer integer parenthesized_expression comparison_operator parenthesized_expression binary_operator identifier integer integer parenthesized_expression comparison_operator parenthesized_expression binary_operator identifier integer integer parenthesized_expression comparison_operator parenthesized_expression binary_operator identifier integer integer parenthesized_expression comparison_operator parenthesized_expression binary_operator identifier integer integer return_statement identifier | Produce a string to represent the code block context |
def _fetchAllChildren(self):
childItems = []
if self._array.ndim == 2:
_nRows, nCols = self._array.shape if self._array is not None else (0, 0)
for col in range(nCols):
colItem = SliceRti(self._array[:, col], nodeName="channel-{}".format(col),
fileName=self.fileName, iconColor=self.iconColor,
attributes=self.attributes)
childItems.append(colItem)
return childItems | module function_definition identifier parameters identifier block expression_statement assignment identifier list if_statement comparison_operator attribute attribute identifier identifier identifier integer block expression_statement assignment pattern_list identifier identifier conditional_expression attribute attribute identifier identifier identifier comparison_operator attribute identifier identifier none tuple integer integer for_statement identifier call identifier argument_list identifier block expression_statement assignment identifier call identifier argument_list subscript attribute identifier identifier slice identifier keyword_argument identifier call attribute string string_start string_content string_end identifier argument_list identifier keyword_argument identifier attribute identifier identifier keyword_argument identifier attribute identifier identifier keyword_argument identifier attribute identifier identifier expression_statement call attribute identifier identifier argument_list identifier return_statement identifier | Adds an ArrayRti per column as children so that they can be inspected easily |
def _compile_literal(self, data):
if data is None:
return 'nil'
elif data is True:
return 'yes'
elif data is False:
return 'no'
else:
return repr(data) | module function_definition identifier parameters identifier identifier block if_statement comparison_operator identifier none block return_statement string string_start string_content string_end elif_clause comparison_operator identifier true block return_statement string string_start string_content string_end elif_clause comparison_operator identifier false block return_statement string string_start string_content string_end else_clause block return_statement call identifier argument_list identifier | Write correct representation of literal. |
def delaunay_2d(self, tol=1e-05, alpha=0.0, offset=1.0, bound=False, inplace=False):
alg = vtk.vtkDelaunay2D()
alg.SetProjectionPlaneMode(vtk.VTK_BEST_FITTING_PLANE)
alg.SetInputDataObject(self)
alg.SetTolerance(tol)
alg.SetAlpha(alpha)
alg.SetOffset(offset)
alg.SetBoundingTriangulation(bound)
alg.Update()
mesh = _get_output(alg)
if inplace:
self.overwrite(mesh)
else:
return mesh | module function_definition identifier parameters identifier default_parameter identifier float default_parameter identifier float default_parameter identifier float default_parameter identifier false default_parameter identifier false block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list attribute identifier identifier expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list expression_statement assignment identifier call identifier argument_list identifier if_statement identifier block expression_statement call attribute identifier identifier argument_list identifier else_clause block return_statement identifier | Apply a delaunay 2D filter along the best fitting plane |
def print_descr(rect, annot):
annot.parent.insertText(rect.br + (10, 0),
"'%s' annotation" % annot.type[1], color = red) | module function_definition identifier parameters identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list binary_operator attribute identifier identifier tuple integer integer binary_operator string string_start string_content string_end subscript attribute identifier identifier integer keyword_argument identifier identifier | Print a short description to the right of an annot rect. |
def ssh_calc_aws(node):
userlu = {"ubunt": "ubuntu", "debia": "admin", "fedor": "root",
"cento": "centos", "openb": "root"}
image_name = node.driver.get_image(node.extra['image_id']).name
if not image_name:
image_name = node.name
usertemp = ['name'] + [value for key, value in list(userlu.items())
if key in image_name.lower()]
usertemp = dict(zip(usertemp[::2], usertemp[1::2]))
username = usertemp.get('name', 'ec2-user')
return username | module function_definition identifier parameters identifier block expression_statement assignment identifier dictionary pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end string string_start string_content string_end expression_statement assignment identifier attribute call attribute attribute identifier identifier identifier argument_list subscript attribute identifier identifier string string_start string_content string_end identifier if_statement not_operator identifier block expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier binary_operator list string string_start string_content string_end list_comprehension identifier for_in_clause pattern_list identifier identifier call identifier argument_list call attribute identifier identifier argument_list if_clause comparison_operator identifier call attribute identifier identifier argument_list expression_statement assignment identifier call identifier argument_list call identifier argument_list subscript identifier slice integer subscript identifier slice integer integer expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end string string_start string_content string_end return_statement identifier | Calculate default ssh-user based on image-if of AWS instance. |
def team_info():
teams = __get_league_object().find('teams').findall('team')
output = []
for team in teams:
info = {}
for x in team.attrib:
info[x] = team.attrib[x]
output.append(info)
return output | module function_definition identifier parameters block expression_statement assignment identifier call attribute call attribute call identifier argument_list identifier argument_list string string_start string_content string_end identifier argument_list string string_start string_content string_end expression_statement assignment identifier list for_statement identifier identifier block expression_statement assignment identifier dictionary for_statement identifier attribute identifier identifier block expression_statement assignment subscript identifier identifier subscript attribute identifier identifier identifier expression_statement call attribute identifier identifier argument_list identifier return_statement identifier | Returns a list of team information dictionaries |
def preview(num):
problem_text = Problem(num).text
click.secho("Project Euler Problem %i" % num, bold=True)
click.echo(problem_text) | module function_definition identifier parameters identifier block expression_statement assignment identifier attribute call identifier argument_list identifier identifier expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end identifier keyword_argument identifier true expression_statement call attribute identifier identifier argument_list identifier | Prints the text of a problem. |
def full_path(self):
if self.parent:
return os.path.join(self.parent.full_path, self.name)
return self.name | module function_definition identifier parameters identifier block if_statement attribute identifier identifier block return_statement call attribute attribute identifier identifier identifier argument_list attribute attribute identifier identifier identifier attribute identifier identifier return_statement attribute identifier identifier | Absolute system path to the node |
def _match_iter_single(self, path_elements, start_at):
length = len(path_elements)
if length == 0:
return
if self.bound_end:
start = length - 1
if start < start_at:
return
else:
start = start_at
if self.bound_start:
end = 1
else:
end = length
if start > end:
return
for index in range(start, end):
element = path_elements[index]
if self.elements[0].match(element):
yield index + 1 | module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier call identifier argument_list identifier if_statement comparison_operator identifier integer block return_statement if_statement attribute identifier identifier block expression_statement assignment identifier binary_operator identifier integer if_statement comparison_operator identifier identifier block return_statement else_clause block expression_statement assignment identifier identifier if_statement attribute identifier identifier block expression_statement assignment identifier integer else_clause block expression_statement assignment identifier identifier if_statement comparison_operator identifier identifier block return_statement for_statement identifier call identifier argument_list identifier identifier block expression_statement assignment identifier subscript identifier identifier if_statement call attribute subscript attribute identifier identifier integer identifier argument_list identifier block expression_statement yield binary_operator identifier integer | Implementation of match_iter optimized for self.elements of length 1 |
def lookup_forward(name):
ip_addresses = {}
addresses = list(set(str(ip[4][0]) for ip in socket.getaddrinfo(
name, None)))
if addresses is None:
return ip_addresses
for address in addresses:
if type(ipaddress.ip_address(address)) is ipaddress.IPv4Address:
ip_addresses['ipv4'] = address
if type(ipaddress.ip_address(address)) is ipaddress.IPv6Address:
ip_addresses['ipv6'] = address
return ip_addresses | module function_definition identifier parameters identifier block expression_statement assignment identifier dictionary expression_statement assignment identifier call identifier argument_list call identifier generator_expression call identifier argument_list subscript subscript identifier integer integer for_in_clause identifier call attribute identifier identifier argument_list identifier none if_statement comparison_operator identifier none block return_statement identifier for_statement identifier identifier block if_statement comparison_operator call identifier argument_list call attribute identifier identifier argument_list identifier attribute identifier identifier block expression_statement assignment subscript identifier string string_start string_content string_end identifier if_statement comparison_operator call identifier argument_list call attribute identifier identifier argument_list identifier attribute identifier identifier block expression_statement assignment subscript identifier string string_start string_content string_end identifier return_statement identifier | Perform a forward lookup of a hostname. |
def formatted_value(self):
val = self.value
pval = val
ftype = self.value_type
if ftype == "percentage":
pval = int(round(val * 100))
if self.type == "negative":
pval = 0 - (100 - pval)
else:
pval -= 100
elif ftype == "additive_percentage":
pval = int(round(val * 100))
elif ftype == "inverted_percentage":
pval = 100 - int(round(val * 100))
if self.type == "negative":
if self.value > 1:
pval = 0 - pval
elif ftype == "additive" or ftype == "particle_index" or ftype == "account_id":
if int(val) == val:
pval = int(val)
elif ftype == "date":
d = time.gmtime(int(val))
pval = time.strftime("%Y-%m-%d %H:%M:%S", d)
return u"{0}".format(pval) | module function_definition identifier parameters identifier block expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier identifier expression_statement assignment identifier attribute identifier identifier if_statement comparison_operator identifier string string_start string_content string_end block expression_statement assignment identifier call identifier argument_list call identifier argument_list binary_operator identifier integer if_statement comparison_operator attribute identifier identifier string string_start string_content string_end block expression_statement assignment identifier binary_operator integer parenthesized_expression binary_operator integer identifier else_clause block expression_statement augmented_assignment identifier integer elif_clause comparison_operator identifier string string_start string_content string_end block expression_statement assignment identifier call identifier argument_list call identifier argument_list binary_operator identifier integer elif_clause comparison_operator identifier string string_start string_content string_end block expression_statement assignment identifier binary_operator integer call identifier argument_list call identifier argument_list binary_operator identifier integer if_statement comparison_operator attribute identifier identifier string string_start string_content string_end block if_statement comparison_operator attribute identifier identifier integer block expression_statement assignment identifier binary_operator integer identifier elif_clause boolean_operator boolean_operator comparison_operator identifier string string_start string_content string_end comparison_operator identifier string string_start string_content string_end comparison_operator identifier string string_start string_content string_end block if_statement comparison_operator call identifier argument_list identifier identifier block expression_statement assignment identifier call identifier argument_list identifier elif_clause comparison_operator identifier string string_start string_content string_end block expression_statement assignment identifier call attribute identifier identifier argument_list call identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end identifier return_statement call attribute string string_start string_content string_end identifier argument_list identifier | Returns a formatted value as a string |
def _remove_n(self):
for i, result in enumerate(self.results):
largest = max(str(result).split('N'), key=len)
start = result.locate(largest)[0][0]
stop = start + len(largest)
if start != stop:
self.results[i] = self.results[i][start:stop] | module function_definition identifier parameters identifier block for_statement pattern_list identifier identifier call identifier argument_list attribute identifier identifier block expression_statement assignment identifier call identifier argument_list call attribute call identifier argument_list identifier identifier argument_list string string_start string_content string_end keyword_argument identifier identifier expression_statement assignment identifier subscript subscript call attribute identifier identifier argument_list identifier integer integer expression_statement assignment identifier binary_operator identifier call identifier argument_list identifier if_statement comparison_operator identifier identifier block expression_statement assignment subscript attribute identifier identifier identifier subscript subscript attribute identifier identifier identifier slice identifier identifier | Remove terminal Ns from sequencing results. |
def powernode_data(self, name:str) -> Powernode:
self.assert_powernode(name)
contained_nodes = frozenset(self.nodes_in(name))
return Powernode(
size=len(contained_nodes),
contained=frozenset(self.all_in(name)),
contained_pnodes=frozenset(self.powernodes_in(name)),
contained_nodes=contained_nodes,
) | module function_definition identifier parameters identifier typed_parameter identifier type identifier type identifier block expression_statement call attribute identifier identifier argument_list identifier expression_statement assignment identifier call identifier argument_list call attribute identifier identifier argument_list identifier return_statement call identifier argument_list keyword_argument identifier call identifier argument_list identifier keyword_argument identifier call identifier argument_list call attribute identifier identifier argument_list identifier keyword_argument identifier call identifier argument_list call attribute identifier identifier argument_list identifier keyword_argument identifier identifier | Return a Powernode object describing the given powernode |
def _call_syndic(self, func, args=(), kwargs=None, master_id=None):
if kwargs is None:
kwargs = {}
successful = False
for master, syndic_future in self.iter_master_options(master_id):
if not syndic_future.done() or syndic_future.exception():
log.error(
'Unable to call %s on %s, that syndic is not connected',
func, master
)
continue
try:
getattr(syndic_future.result(), func)(*args, **kwargs)
successful = True
except SaltClientError:
log.error(
'Unable to call %s on %s, trying another...',
func, master
)
self._mark_master_dead(master)
if not successful:
log.critical('Unable to call %s on any masters!', func) | module function_definition identifier parameters identifier identifier default_parameter identifier tuple default_parameter identifier none default_parameter identifier none block if_statement comparison_operator identifier none block expression_statement assignment identifier dictionary expression_statement assignment identifier false for_statement pattern_list identifier identifier call attribute identifier identifier argument_list identifier block if_statement boolean_operator not_operator call attribute identifier identifier argument_list call attribute identifier identifier argument_list block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier identifier continue_statement try_statement block expression_statement call call identifier argument_list call attribute identifier identifier argument_list identifier argument_list list_splat identifier dictionary_splat identifier expression_statement assignment identifier true except_clause identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier identifier expression_statement call attribute identifier identifier argument_list identifier if_statement not_operator identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier | Wrapper to call a given func on a syndic, best effort to get the one you asked for |
def _ParseYamlFromFile(filedesc):
content = filedesc.read()
return yaml.Parse(content) or collections.OrderedDict() | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list return_statement boolean_operator call attribute identifier identifier argument_list identifier call attribute identifier identifier argument_list | Parses given YAML file. |
def construct_url(self):
path = [self.path]
path.extend([str(x) for x in self.params])
url = self.client.base_url + '/'.join(x for x in path if x)
query = self.kwargs.get('query')
if query:
if type(query) is dict:
query = query.items()
query = [
(k, v) for (k, v) in query
if v is not None
]
url += '?' + urlencode(query)
return url | module function_definition identifier parameters identifier block expression_statement assignment identifier list attribute identifier identifier expression_statement call attribute identifier identifier argument_list list_comprehension call identifier argument_list identifier for_in_clause identifier attribute identifier identifier expression_statement assignment identifier binary_operator attribute attribute identifier identifier identifier call attribute string string_start string_content string_end identifier generator_expression identifier for_in_clause identifier identifier if_clause identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end if_statement identifier block if_statement comparison_operator call identifier argument_list identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement assignment identifier list_comprehension tuple identifier identifier for_in_clause tuple_pattern identifier identifier identifier if_clause comparison_operator identifier none expression_statement augmented_assignment identifier binary_operator string string_start string_content string_end call identifier argument_list identifier return_statement identifier | Construct a full plex request URI, with `params`. |
def save_block(self, data, dest):
write_csv(dest, data, self.sep, self.fmt, 'no-header') | module function_definition identifier parameters identifier identifier identifier block expression_statement call identifier argument_list identifier identifier attribute identifier identifier attribute identifier identifier string string_start string_content string_end | Save data on dest, which is file open in 'a' mode |
def create_equipamento(self):
return Equipamento(
self.networkapi_url,
self.user,
self.password,
self.user_ldap) | module function_definition identifier parameters identifier block return_statement call identifier argument_list attribute identifier identifier attribute identifier identifier attribute identifier identifier attribute identifier identifier | Get an instance of equipamento services facade. |
def _file_name(self, dtype_out_time, extension='nc'):
if dtype_out_time is None:
dtype_out_time = ''
out_lbl = utils.io.data_out_label(self.intvl_out, dtype_out_time,
dtype_vert=self.dtype_out_vert)
in_lbl = utils.io.data_in_label(self.intvl_in, self.dtype_in_time,
self.dtype_in_vert)
start_year = utils.times.infer_year(self.start_date)
end_year = utils.times.infer_year(self.end_date)
yr_lbl = utils.io.yr_label((start_year, end_year))
return '.'.join(
[self.name, out_lbl, in_lbl, self.model.name,
self.run.name, yr_lbl, extension]
).replace('..', '.') | module function_definition identifier parameters identifier identifier default_parameter identifier string string_start string_content string_end block if_statement comparison_operator identifier none block expression_statement assignment identifier string string_start string_end expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list attribute identifier identifier identifier keyword_argument identifier attribute identifier identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list attribute identifier identifier attribute identifier identifier attribute identifier identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list attribute identifier identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list attribute identifier identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list tuple identifier identifier return_statement call attribute call attribute string string_start string_content string_end identifier argument_list list attribute identifier identifier identifier identifier attribute attribute identifier identifier identifier attribute attribute identifier identifier identifier identifier identifier identifier argument_list string string_start string_content string_end string string_start string_content string_end | Create the name of the aospy file. |
def MakeRequest(self, data):
stats_collector_instance.Get().IncrementCounter("grr_client_sent_bytes",
len(data))
response = self.http_manager.OpenServerEndpoint(
path="control?api=%s" % config.CONFIG["Network.api"],
verify_cb=self.VerifyServerControlResponse,
data=data,
headers={"Content-Type": "binary/octet-stream"})
if response.code == 406:
self.InitiateEnrolment()
return response
if response.code == 200:
stats_collector_instance.Get().IncrementCounter(
"grr_client_received_bytes", len(response.data))
return response
return response | module function_definition identifier parameters identifier identifier block expression_statement call attribute call attribute identifier identifier argument_list identifier argument_list string string_start string_content string_end call identifier argument_list identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list keyword_argument identifier binary_operator string string_start string_content string_end subscript attribute identifier identifier string string_start string_content string_end keyword_argument identifier attribute identifier identifier keyword_argument identifier identifier keyword_argument identifier dictionary pair string string_start string_content string_end string string_start string_content string_end if_statement comparison_operator attribute identifier identifier integer block expression_statement call attribute identifier identifier argument_list return_statement identifier if_statement comparison_operator attribute identifier identifier integer block expression_statement call attribute call attribute identifier identifier argument_list identifier argument_list string string_start string_content string_end call identifier argument_list attribute identifier identifier return_statement identifier return_statement identifier | Make a HTTP Post request to the server 'control' endpoint. |
def _step_failure(self, exc):
self.log_crit(u"STEP %d (%s) FAILURE" % (self.step_index, self.step_label))
self.step_index += 1
self.log_exc(u"Unexpected error while executing task", exc, True, ExecuteTaskExecutionError) | module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end tuple attribute identifier identifier attribute identifier identifier expression_statement augmented_assignment attribute identifier identifier integer expression_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier true identifier | Log failure of a step |
def entity_tags_form(self, entity, ns=None):
if ns is None:
ns = self.entity_default_ns(entity)
field = TagsField(label=_l("Tags"), ns=ns)
cls = type("EntityNSTagsForm", (_TagsForm,), {"tags": field})
return cls | module function_definition identifier parameters identifier identifier default_parameter identifier none block if_statement comparison_operator identifier none block expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier call identifier argument_list keyword_argument identifier call identifier argument_list string string_start string_content string_end keyword_argument identifier identifier expression_statement assignment identifier call identifier argument_list string string_start string_content string_end tuple identifier dictionary pair string string_start string_content string_end identifier return_statement identifier | Construct a form class with a field for tags in namespace `ns`. |
def setViewMode( self, state = True ):
if self._viewMode == state:
return
self._viewMode = state
if state:
self._mainView.setDragMode( self._mainView.ScrollHandDrag )
else:
self._mainView.setDragMode( self._mainView.RubberBandDrag )
self.emitViewModeChanged() | module function_definition identifier parameters identifier default_parameter identifier true block if_statement comparison_operator attribute identifier identifier identifier block return_statement expression_statement assignment attribute identifier identifier identifier if_statement identifier block expression_statement call attribute attribute identifier identifier identifier argument_list attribute attribute identifier identifier identifier else_clause block expression_statement call attribute attribute identifier identifier identifier argument_list attribute attribute identifier identifier identifier expression_statement call attribute identifier identifier argument_list | Starts the view mode for moving around the scene. |
def data_type_to_numpy(datatype, unsigned=False):
basic_type = _dtypeLookup[datatype]
if datatype in (stream.STRING, stream.OPAQUE):
return np.dtype(basic_type)
if unsigned:
basic_type = basic_type.replace('i', 'u')
return np.dtype('=' + basic_type) | module function_definition identifier parameters identifier default_parameter identifier false block expression_statement assignment identifier subscript identifier identifier if_statement comparison_operator identifier tuple attribute identifier identifier attribute identifier identifier block return_statement call attribute identifier identifier argument_list identifier if_statement identifier block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end string string_start string_content string_end return_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end identifier | Convert an ncstream datatype to a numpy one. |
def getCiphertextLen(self, ciphertext):
plaintext_length = self.getPlaintextLen(ciphertext)
ciphertext_length = plaintext_length + Encrypter._CTXT_EXPANSION
return ciphertext_length | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier binary_operator identifier attribute identifier identifier return_statement identifier | Given a ``ciphertext`` with a valid header, returns the length of the ciphertext inclusive of ciphertext expansion. |
def to_jd(year, month, day, method=None):
method = method or 'equinox'
if day < 1 or day > 30:
raise ValueError("Invalid day for this calendar")
if month > 13:
raise ValueError("Invalid month for this calendar")
if month == 13 and day > 5 + leap(year, method=method):
raise ValueError("Invalid day for this month in this calendar")
if method == 'equinox':
return _to_jd_equinox(year, month, day)
else:
return _to_jd_schematic(year, month, day, method) | module function_definition identifier parameters identifier identifier identifier default_parameter identifier none block expression_statement assignment identifier boolean_operator identifier string string_start string_content string_end if_statement boolean_operator comparison_operator identifier integer comparison_operator identifier integer block raise_statement call identifier argument_list string string_start string_content string_end if_statement comparison_operator identifier integer block raise_statement call identifier argument_list string string_start string_content string_end if_statement boolean_operator comparison_operator identifier integer comparison_operator identifier binary_operator integer call identifier argument_list identifier keyword_argument identifier identifier block raise_statement call identifier argument_list string string_start string_content string_end if_statement comparison_operator identifier string string_start string_content string_end block return_statement call identifier argument_list identifier identifier identifier else_clause block return_statement call identifier argument_list identifier identifier identifier identifier | Obtain Julian day from a given French Revolutionary calendar date. |
def _execute_comprehension(self, node: Union[ast.ListComp, ast.SetComp, ast.GeneratorExp, ast.DictComp]) -> Any:
args = [ast.arg(arg=name) for name in sorted(self._name_to_value.keys())]
func_def_node = ast.FunctionDef(
name="generator_expr",
args=ast.arguments(args=args, kwonlyargs=[], kw_defaults=[], defaults=[]),
decorator_list=[],
body=[ast.Return(node)])
module_node = ast.Module(body=[func_def_node])
ast.fix_missing_locations(module_node)
code = compile(source=module_node, filename='<ast>', mode='exec')
module_locals = {}
module_globals = {}
exec(code, module_globals, module_locals)
generator_expr_func = module_locals["generator_expr"]
return generator_expr_func(**self._name_to_value) | module function_definition identifier parameters identifier typed_parameter identifier type generic_type identifier type_parameter type attribute identifier identifier type attribute identifier identifier type attribute identifier identifier type attribute identifier identifier type identifier block expression_statement assignment identifier list_comprehension call attribute identifier identifier argument_list keyword_argument identifier identifier for_in_clause identifier call identifier argument_list call attribute attribute identifier identifier identifier argument_list expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier string string_start string_content string_end keyword_argument identifier call attribute identifier identifier argument_list keyword_argument identifier identifier keyword_argument identifier list keyword_argument identifier list keyword_argument identifier list keyword_argument identifier list keyword_argument identifier list call attribute identifier identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier list identifier expression_statement call attribute identifier identifier argument_list identifier expression_statement assignment identifier call identifier argument_list keyword_argument identifier identifier keyword_argument identifier string string_start string_content string_end keyword_argument identifier string string_start string_content string_end expression_statement assignment identifier dictionary expression_statement assignment identifier dictionary expression_statement call identifier argument_list identifier identifier identifier expression_statement assignment identifier subscript identifier string string_start string_content string_end return_statement call identifier argument_list dictionary_splat attribute identifier identifier | Compile the generator or comprehension from the node and execute the compiled code. |
def _call_in_reactor_thread(self, f, *args, **kwargs):
self._reactor.callFromThread(f, *args, **kwargs) | module function_definition identifier parameters identifier identifier list_splat_pattern identifier dictionary_splat_pattern identifier block expression_statement call attribute attribute identifier identifier identifier argument_list identifier list_splat identifier dictionary_splat identifier | Call the given function with args in the reactor thread. |
def geturl(self):
return urlparse.urlunparse((
self.scheme,
self.netloc,
self.path,
self.params,
self.query_str,
self.fragment,
)) | module function_definition identifier parameters identifier block return_statement call attribute identifier identifier argument_list tuple attribute identifier identifier attribute identifier identifier attribute identifier identifier attribute identifier identifier attribute identifier identifier attribute identifier identifier | return the dsn back into url form |
async def get_constants(self):
url = self.BASE + '/constants'
data = await self.request(url)
return Constants(self, data) | module function_definition identifier parameters identifier block expression_statement assignment identifier binary_operator attribute identifier identifier string string_start string_content string_end expression_statement assignment identifier await call attribute identifier identifier argument_list identifier return_statement call identifier argument_list identifier identifier | Get clash royale constants. |
def restart(ctx, **kwargs):
update_context(ctx, kwargs)
daemon = mk_daemon(ctx)
daemon.stop()
daemon.start() | module function_definition identifier parameters identifier dictionary_splat_pattern identifier block expression_statement call identifier argument_list identifier identifier expression_statement assignment identifier call identifier argument_list identifier expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list | restart a vaping process |
def init(cls, name):
clsdict = {subcls.name: subcls for subcls in cls.__subclasses__()
if hasattr(subcls, 'name')}
return clsdict.get(name, cls)(name) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier dictionary_comprehension pair attribute identifier identifier identifier for_in_clause identifier call attribute identifier identifier argument_list if_clause call identifier argument_list identifier string string_start string_content string_end return_statement call call attribute identifier identifier argument_list identifier identifier argument_list identifier | Return an instance of this class or an appropriate subclass |
def replace(self, p_todos):
self.erase()
self.add_todos(p_todos)
self.dirty = True | module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list identifier expression_statement assignment attribute identifier identifier true | Replaces whole todolist with todo objects supplied as p_todos. |
def xpathNewContext(self):
ret = libxml2mod.xmlXPathNewContext(self._o)
if ret is None:raise xpathError('xmlXPathNewContext() failed')
__tmp = xpathContext(_obj=ret)
return __tmp | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list attribute identifier identifier if_statement comparison_operator identifier none block raise_statement call identifier argument_list string string_start string_content string_end expression_statement assignment identifier call identifier argument_list keyword_argument identifier identifier return_statement identifier | Create a new xmlXPathContext |
def parse_pdb_file(self):
self.pdb_parse_tree = {'info': {},
'data': {
self.state: {}}
}
try:
for line in self.pdb_lines:
self.current_line = line
record_name = line[:6].strip()
if record_name in self.proc_functions:
self.proc_functions[record_name]()
else:
if record_name not in self.pdb_parse_tree['info']:
self.pdb_parse_tree['info'][record_name] = []
self.pdb_parse_tree['info'][record_name].append(line)
except EOFError:
pass
if self.new_labels:
ampal_data_session.commit()
return | module function_definition identifier parameters identifier block expression_statement assignment attribute identifier identifier dictionary pair string string_start string_content string_end dictionary pair string string_start string_content string_end dictionary pair attribute identifier identifier dictionary try_statement block for_statement identifier attribute identifier identifier block expression_statement assignment attribute identifier identifier identifier expression_statement assignment identifier call attribute subscript identifier slice integer identifier argument_list if_statement comparison_operator identifier attribute identifier identifier block expression_statement call subscript attribute identifier identifier identifier argument_list else_clause block if_statement comparison_operator identifier subscript attribute identifier identifier string string_start string_content string_end block expression_statement assignment subscript subscript attribute identifier identifier string string_start string_content string_end identifier list expression_statement call attribute subscript subscript attribute identifier identifier string string_start string_content string_end identifier identifier argument_list identifier except_clause identifier block pass_statement if_statement attribute identifier identifier block expression_statement call attribute identifier identifier argument_list return_statement | Runs the PDB parser. |
def form_lines_valid(self, form):
handled = 0
for inner_form in form:
if not inner_form.cleaned_data.get(formsets.DELETION_FIELD_NAME):
handled += 1
self.handle_inner_form(inner_form)
self.log_and_notify_lines(handled)
return http.HttpResponseRedirect(self.get_success_url()) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier integer for_statement identifier identifier block if_statement not_operator call attribute attribute identifier identifier identifier argument_list attribute identifier identifier block expression_statement augmented_assignment identifier integer expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier return_statement call attribute identifier identifier argument_list call attribute identifier identifier argument_list | Handle a valid LineFormSet. |
def randrange(seq):
seq = seq.copy()
choose = rng().choice
remove = seq.remove
for x in range(len(seq)):
y = choose(seq)
remove(y)
yield y | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement assignment identifier attribute call identifier argument_list identifier expression_statement assignment identifier attribute identifier identifier for_statement identifier call identifier argument_list call identifier argument_list identifier block expression_statement assignment identifier call identifier argument_list identifier expression_statement call identifier argument_list identifier expression_statement yield identifier | Yields random values from @seq until @seq is empty |
def process_fields(self, fields):
result = []
strip = ''.join(self.PREFIX_MAP)
for field in fields:
direction = self.PREFIX_MAP['']
if field[0] in self.PREFIX_MAP:
direction = self.PREFIX_MAP[field[0]]
field = field.lstrip(strip)
result.append((field, direction))
return result | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier list expression_statement assignment identifier call attribute string string_start string_end identifier argument_list attribute identifier identifier for_statement identifier identifier block expression_statement assignment identifier subscript attribute identifier identifier string string_start string_end if_statement comparison_operator subscript identifier integer attribute identifier identifier block expression_statement assignment identifier subscript attribute identifier identifier subscript identifier integer expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list tuple identifier identifier return_statement identifier | Process a list of simple string field definitions and assign their order based on prefix. |
def _update_range(self, response):
header_value = response.headers.get('x-resource-range', '')
m = re.match(r'\d+-\d+/(\d+)$', header_value)
if m:
self._count = int(m.group(1))
else:
self._count = None | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end string string_start string_end expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end identifier if_statement identifier block expression_statement assignment attribute identifier identifier call identifier argument_list call attribute identifier identifier argument_list integer else_clause block expression_statement assignment attribute identifier identifier none | Update the query count property from the `X-Resource-Range` response header |
def validate(self):
if self.error:
return False
for v in self.validators:
self.error = v(self.value)
if self.error:
return False
return True | module function_definition identifier parameters identifier block if_statement attribute identifier identifier block return_statement false for_statement identifier attribute identifier identifier block expression_statement assignment attribute identifier identifier call identifier argument_list attribute identifier identifier if_statement attribute identifier identifier block return_statement false return_statement true | Run the form value through the validators, and update the error field if needed |
def convert_body_frame(self, phi, theta, phiDot, thetaDot, psiDot):
p = phiDot - psiDot*math.sin(theta)
q = math.cos(phi)*thetaDot + math.sin(phi)*psiDot*math.cos(theta)
r = math.cos(phi)*psiDot*math.cos(theta) - math.sin(phi)*thetaDot
return (p, q, r) | module function_definition identifier parameters identifier identifier identifier identifier identifier identifier block expression_statement assignment identifier binary_operator identifier binary_operator identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier binary_operator binary_operator call attribute identifier identifier argument_list identifier identifier binary_operator binary_operator call attribute identifier identifier argument_list identifier identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier binary_operator binary_operator binary_operator call attribute identifier identifier argument_list identifier identifier call attribute identifier identifier argument_list identifier binary_operator call attribute identifier identifier argument_list identifier identifier return_statement tuple identifier identifier identifier | convert a set of roll rates from earth frame to body frame |
def _from_dict(cls, _dict):
args = {}
if 'entities' in _dict:
args['entities'] = [
QueryEntitiesResponseItem._from_dict(x)
for x in (_dict.get('entities'))
]
return cls(**args) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier dictionary if_statement comparison_operator string string_start string_content string_end identifier block expression_statement assignment subscript identifier string string_start string_content string_end list_comprehension call attribute identifier identifier argument_list identifier for_in_clause identifier parenthesized_expression call attribute identifier identifier argument_list string string_start string_content string_end return_statement call identifier argument_list dictionary_splat identifier | Initialize a QueryEntitiesResponse object from a json dictionary. |
def cleanup_temporary_directories(self):
while self.build_directories:
shutil.rmtree(self.build_directories.pop())
for requirement in self.reported_requirements:
requirement.remove_temporary_source()
while self.eggs_links:
symbolic_link = self.eggs_links.pop()
if os.path.islink(symbolic_link):
os.unlink(symbolic_link) | module function_definition identifier parameters identifier block while_statement attribute identifier identifier block expression_statement call attribute identifier identifier argument_list call attribute attribute identifier identifier identifier argument_list for_statement identifier attribute identifier identifier block expression_statement call attribute identifier identifier argument_list while_statement attribute identifier identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list if_statement call attribute attribute identifier identifier identifier argument_list identifier block expression_statement call attribute identifier identifier argument_list identifier | Delete the build directories and any temporary directories created by pip. |
def force_update(self):
if self.disabled or self.terminated or not self.enabled:
return
for meth in self.methods:
self.methods[meth]["cached_until"] = time()
if self.config["debug"]:
self._py3_wrapper.log("clearing cache for method {}".format(meth))
self._py3_wrapper.timeout_queue_add(self) | module function_definition identifier parameters identifier block if_statement boolean_operator boolean_operator attribute identifier identifier attribute identifier identifier not_operator attribute identifier identifier block return_statement for_statement identifier attribute identifier identifier block expression_statement assignment subscript subscript attribute identifier identifier identifier string string_start string_content string_end call identifier argument_list if_statement subscript attribute identifier identifier string string_start string_content string_end block expression_statement call attribute attribute identifier identifier identifier argument_list call attribute string string_start string_content string_end identifier argument_list identifier expression_statement call attribute attribute identifier identifier identifier argument_list identifier | Forces an update of the module. |
def delete_fw(self, fw_id):
self.fw_id = None
self.fw_name = None
self.fw_created = False
self.active_pol_id = None | module function_definition identifier parameters identifier identifier block expression_statement assignment attribute identifier identifier none expression_statement assignment attribute identifier identifier none expression_statement assignment attribute identifier identifier false expression_statement assignment attribute identifier identifier none | Deletes the FW local attributes. |
def to_param_dict(self):
param_dict = {}
for index, dictionary in enumerate(self.value):
for key, value in dictionary.items():
param_name = '{param_name}[{index}][{key}]'.format(
param_name=self.param_name,
index=index,
key=key)
param_dict[param_name] = value
return OrderedDict(sorted(param_dict.items())) | module function_definition identifier parameters identifier block expression_statement assignment identifier dictionary for_statement pattern_list identifier identifier call identifier argument_list attribute identifier identifier block for_statement pattern_list identifier identifier call attribute identifier identifier argument_list block expression_statement assignment identifier call attribute string string_start string_content string_end identifier argument_list keyword_argument identifier attribute identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier expression_statement assignment subscript identifier identifier identifier return_statement call identifier argument_list call identifier argument_list call attribute identifier identifier argument_list | Sorts to ensure Order is consistent for Testing |
def _connect(self):
self.conn = self._create_connection()
spawn(self.conn.connect)
self.set_nick(self.nick)
self.cmd(u'USER', u'{0} 3 * {1}'.format(self.nick, self.realname)) | module function_definition identifier parameters identifier block expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list expression_statement call identifier argument_list attribute attribute identifier identifier identifier expression_statement call attribute identifier identifier argument_list attribute identifier identifier expression_statement call attribute identifier identifier argument_list string string_start string_content string_end call attribute string string_start string_content string_end identifier argument_list attribute identifier identifier attribute identifier identifier | Connects the bot to the server and identifies itself. |
def DFS(G):
if not G.vertices:
raise GraphInsertError("This graph have no vertices.")
color = {}
pred = {}
reach = {}
finish = {}
def DFSvisit(G, current, time):
color[current] = 'grey'
time += 1
reach[current] = time
for vertex in G.vertices[current]:
if color[vertex] == 'white':
pred[vertex] = current
time = DFSvisit(G, vertex, time)
color[current] = 'black'
time += 1
finish[current] = time
return time
for vertex in G.vertices:
color[vertex] = 'white'
pred[vertex] = None
reach[vertex] = 0
finish[vertex] = 0
time = 0
for vertex in G.vertices:
if color[vertex] == 'white':
time = DFSvisit(G, vertex, time)
vertex_data = {}
for vertex in G.vertices:
vertex_data[vertex] = (pred[vertex], reach[vertex], finish[vertex])
return vertex_data | module function_definition identifier parameters identifier block if_statement not_operator attribute identifier identifier block raise_statement call identifier argument_list string string_start string_content string_end expression_statement assignment identifier dictionary expression_statement assignment identifier dictionary expression_statement assignment identifier dictionary expression_statement assignment identifier dictionary function_definition identifier parameters identifier identifier identifier block expression_statement assignment subscript identifier identifier string string_start string_content string_end expression_statement augmented_assignment identifier integer expression_statement assignment subscript identifier identifier identifier for_statement identifier subscript attribute identifier identifier identifier block if_statement comparison_operator subscript identifier identifier string string_start string_content string_end block expression_statement assignment subscript identifier identifier identifier expression_statement assignment identifier call identifier argument_list identifier identifier identifier expression_statement assignment subscript identifier identifier string string_start string_content string_end expression_statement augmented_assignment identifier integer expression_statement assignment subscript identifier identifier identifier return_statement identifier for_statement identifier attribute identifier identifier block expression_statement assignment subscript identifier identifier string string_start string_content string_end expression_statement assignment subscript identifier identifier none expression_statement assignment subscript identifier identifier integer expression_statement assignment subscript identifier identifier integer expression_statement assignment identifier integer for_statement identifier attribute identifier identifier block if_statement comparison_operator subscript identifier identifier string string_start string_content string_end block expression_statement assignment identifier call identifier argument_list identifier identifier identifier expression_statement assignment identifier dictionary for_statement identifier attribute identifier identifier block expression_statement assignment subscript identifier identifier tuple subscript identifier identifier subscript identifier identifier subscript identifier identifier return_statement identifier | Algorithm for depth-first searching the vertices of a graph. |
def sanitizer(name, replacements=[(':','_'), ('/','_'), ('\\','_')]):
for old,new in replacements:
name = name.replace(old,new)
return name | module function_definition identifier parameters identifier default_parameter identifier list tuple string string_start string_content string_end string string_start string_content string_end tuple string string_start string_content string_end string string_start string_content string_end tuple string string_start string_content escape_sequence string_end string string_start string_content string_end block for_statement pattern_list identifier identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier identifier return_statement identifier | String sanitizer to avoid problematic characters in filenames. |
def setup_sighandlers(self):
signal.signal(signal.SIGINT, signal.SIG_IGN)
signal.signal(signal.SIGTERM, signal.SIG_IGN)
signal.signal(signal.SIGPROF, self.on_sigprof)
signal.signal(signal.SIGABRT, self.stop)
signal.siginterrupt(signal.SIGPROF, False)
signal.siginterrupt(signal.SIGABRT, False)
LOGGER.debug('Signal handlers setup') | module function_definition identifier parameters identifier block expression_statement call attribute identifier identifier argument_list attribute identifier identifier attribute identifier identifier expression_statement call attribute identifier identifier argument_list attribute identifier identifier attribute identifier identifier expression_statement call attribute identifier identifier argument_list attribute identifier identifier attribute identifier identifier expression_statement call attribute identifier identifier argument_list attribute identifier identifier attribute identifier identifier expression_statement call attribute identifier identifier argument_list attribute identifier identifier false expression_statement call attribute identifier identifier argument_list attribute identifier identifier false expression_statement call attribute identifier identifier argument_list string string_start string_content string_end | Setup the stats and stop signal handlers. |
def _is_vis(channel):
if isinstance(channel, str):
return channel == '00_7'
elif isinstance(channel, int):
return channel == 1
else:
raise ValueError('Invalid channel') | module function_definition identifier parameters identifier block if_statement call identifier argument_list identifier identifier block return_statement comparison_operator identifier string string_start string_content string_end elif_clause call identifier argument_list identifier identifier block return_statement comparison_operator identifier integer else_clause block raise_statement call identifier argument_list string string_start string_content string_end | Determine whether the given channel is a visible channel |
def init_with_keytab(self):
creds_opts = {
'usage': 'initiate',
'name': self._cleaned_options['principal'],
}
store = {}
if self._cleaned_options['keytab'] != DEFAULT_KEYTAB:
store['client_keytab'] = self._cleaned_options['keytab']
if self._cleaned_options['ccache'] != DEFAULT_CCACHE:
store['ccache'] = self._cleaned_options['ccache']
if store:
creds_opts['store'] = store
creds = gssapi.creds.Credentials(**creds_opts)
try:
creds.lifetime
except gssapi.exceptions.ExpiredCredentialsError:
new_creds_opts = copy.deepcopy(creds_opts)
if 'store' in new_creds_opts:
new_creds_opts['store']['ccache'] = _get_temp_ccache()
else:
new_creds_opts['store'] = {'ccache': _get_temp_ccache()}
creds = gssapi.creds.Credentials(**new_creds_opts)
_store = None
if self._cleaned_options['ccache'] != DEFAULT_CCACHE:
_store = {'ccache': store['ccache']}
creds.store(usage='initiate', store=_store, overwrite=True) | module function_definition identifier parameters identifier block expression_statement assignment identifier dictionary pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end subscript attribute identifier identifier string string_start string_content string_end expression_statement assignment identifier dictionary if_statement comparison_operator subscript attribute identifier identifier string string_start string_content string_end identifier block expression_statement assignment subscript identifier string string_start string_content string_end subscript attribute identifier identifier string string_start string_content string_end if_statement comparison_operator subscript attribute identifier identifier string string_start string_content string_end identifier block expression_statement assignment subscript identifier string string_start string_content string_end subscript attribute identifier identifier string string_start string_content string_end if_statement identifier block expression_statement assignment subscript identifier string string_start string_content string_end identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list dictionary_splat identifier try_statement block expression_statement attribute identifier identifier except_clause attribute attribute identifier identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier if_statement comparison_operator string string_start string_content string_end identifier block expression_statement assignment subscript subscript identifier string string_start string_content string_end string string_start string_content string_end call identifier argument_list else_clause block expression_statement assignment subscript identifier string string_start string_content string_end dictionary pair string string_start string_content string_end call identifier argument_list expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list dictionary_splat identifier expression_statement assignment identifier none if_statement comparison_operator subscript attribute identifier identifier string string_start string_content string_end identifier block expression_statement assignment identifier dictionary pair string string_start string_content string_end subscript identifier string string_start string_content string_end expression_statement call attribute identifier identifier argument_list keyword_argument identifier string string_start string_content string_end keyword_argument identifier identifier keyword_argument identifier true | Initialize credential cache with keytab |
def dump(self, path):
try:
with open(path, "wb") as f:
f.write(self.__str__().encode("utf-8"))
except:
pass
with open(path, "wb") as f:
pickle.dump(self.__data__, f) | module function_definition identifier parameters identifier identifier block try_statement block with_statement with_clause with_item as_pattern call identifier argument_list identifier string string_start string_content string_end as_pattern_target identifier block expression_statement call attribute identifier identifier argument_list call attribute call attribute identifier identifier argument_list identifier argument_list string string_start string_content string_end except_clause block pass_statement with_statement with_clause with_item as_pattern call identifier argument_list identifier string string_start string_content string_end as_pattern_target identifier block expression_statement call attribute identifier identifier argument_list attribute identifier identifier identifier | dump DictTree data to json files. |
def addreadergroup(self, newgroup):
hresult, hcontext = SCardEstablishContext(SCARD_SCOPE_USER)
if 0 != hresult:
raise error(
'Failed to establish context: ' + \
SCardGetErrorMessage(hresult))
try:
hresult = SCardIntroduceReaderGroup(hcontext, newgroup)
if 0 != hresult:
raise error(
'Unable to introduce reader group: ' + \
SCardGetErrorMessage(hresult))
else:
innerreadergroups.addreadergroup(self, newgroup)
finally:
hresult = SCardReleaseContext(hcontext)
if 0 != hresult:
raise error(
'Failed to release context: ' + \
SCardGetErrorMessage(hresult)) | module function_definition identifier parameters identifier identifier block expression_statement assignment pattern_list identifier identifier call identifier argument_list identifier if_statement comparison_operator integer identifier block raise_statement call identifier argument_list binary_operator string string_start string_content string_end line_continuation call identifier argument_list identifier try_statement block expression_statement assignment identifier call identifier argument_list identifier identifier if_statement comparison_operator integer identifier block raise_statement call identifier argument_list binary_operator string string_start string_content string_end line_continuation call identifier argument_list identifier else_clause block expression_statement call attribute identifier identifier argument_list identifier identifier finally_clause block expression_statement assignment identifier call identifier argument_list identifier if_statement comparison_operator integer identifier block raise_statement call identifier argument_list binary_operator string string_start string_content string_end line_continuation call identifier argument_list identifier | Add a reader group |
def phenotype_data(self):
if self._phenotype_data is None:
pheno_data = {}
for gsm_name, gsm in iteritems(self.gsms):
tmp = {}
for key, value in iteritems(gsm.metadata):
if len(value) == 0:
tmp[key] = np.nan
elif key.startswith("characteristics_"):
for i, char in enumerate(value):
char = re.split(":\s+", char)
char_type, char_value = [char[0],
": ".join(char[1:])]
tmp[key + "." + str(
i) + "." + char_type] = char_value
else:
tmp[key] = ",".join(value)
pheno_data[gsm_name] = tmp
self._phenotype_data = DataFrame(pheno_data).T
return self._phenotype_data | module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block expression_statement assignment identifier dictionary for_statement pattern_list identifier identifier call identifier argument_list attribute identifier identifier block expression_statement assignment identifier dictionary for_statement pattern_list identifier identifier call identifier argument_list attribute identifier identifier block if_statement comparison_operator call identifier argument_list identifier integer block expression_statement assignment subscript identifier identifier attribute identifier identifier elif_clause call attribute identifier identifier argument_list string string_start string_content string_end block for_statement pattern_list identifier identifier call identifier argument_list identifier block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end identifier expression_statement assignment pattern_list identifier identifier list subscript identifier integer call attribute string string_start string_content string_end identifier argument_list subscript identifier slice integer expression_statement assignment subscript identifier binary_operator binary_operator binary_operator binary_operator identifier string string_start string_content string_end call identifier argument_list identifier string string_start string_content string_end identifier identifier else_clause block expression_statement assignment subscript identifier identifier call attribute string string_start string_content string_end identifier argument_list identifier expression_statement assignment subscript identifier identifier identifier expression_statement assignment attribute identifier identifier attribute call identifier argument_list identifier identifier return_statement attribute identifier identifier | Get the phenotype data for each of the sample. |
def _create_path_if_not_exist(self, path):
if path and not os.path.exists(path):
os.makedirs(path) | module function_definition identifier parameters identifier identifier block if_statement boolean_operator identifier not_operator call attribute attribute identifier identifier identifier argument_list identifier block expression_statement call attribute identifier identifier argument_list identifier | Creates a folders path if it doesn't exist |
def iiif_info_handler(prefix=None, identifier=None,
config=None, klass=None, auth=None, **args):
if (not auth or degraded_request(identifier) or auth.info_authz()):
if (auth):
logging.debug("Authorized for image %s" % identifier)
i = IIIFHandler(prefix, identifier, config, klass, auth)
try:
return i.image_information_response()
except IIIFError as e:
return i.error_response(e)
elif (auth.info_authn()):
abort(401)
else:
response = redirect(host_port_prefix(
config.host, config.port, prefix) + '/' + identifier + '-deg/info.json')
response.headers['Access-control-allow-origin'] = '*'
return response | module function_definition identifier parameters default_parameter identifier none default_parameter identifier none default_parameter identifier none default_parameter identifier none default_parameter identifier none dictionary_splat_pattern identifier block if_statement parenthesized_expression boolean_operator boolean_operator not_operator identifier call identifier argument_list identifier call attribute identifier identifier argument_list block if_statement parenthesized_expression identifier block expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end identifier expression_statement assignment identifier call identifier argument_list identifier identifier identifier identifier identifier try_statement block return_statement call attribute identifier identifier argument_list except_clause as_pattern identifier as_pattern_target identifier block return_statement call attribute identifier identifier argument_list identifier elif_clause parenthesized_expression call attribute identifier identifier argument_list block expression_statement call identifier argument_list integer else_clause block expression_statement assignment identifier call identifier argument_list binary_operator binary_operator binary_operator call identifier argument_list attribute identifier identifier attribute identifier identifier identifier string string_start string_content string_end identifier string string_start string_content string_end expression_statement assignment subscript attribute identifier identifier string string_start string_content string_end string string_start string_content string_end return_statement identifier | Handler for IIIF Image Information requests. |
def _IndexedScan(self, i, max_records=None):
self._ReadIndex()
idx = 0
start_ts = 0
if i >= self._max_indexed:
start_ts = max((0, 0), (self._index[self._max_indexed][0],
self._index[self._max_indexed][1] - 1))
idx = self._max_indexed
else:
try:
possible_idx = i - i % self.INDEX_SPACING
start_ts = (max(0, self._index[possible_idx][0]),
self._index[possible_idx][1] - 1)
idx = possible_idx
except KeyError:
pass
if max_records is not None:
max_records += i - idx
with data_store.DB.GetMutationPool() as mutation_pool:
for (ts, value) in self.Scan(
after_timestamp=start_ts,
max_records=max_records,
include_suffix=True):
self._MaybeWriteIndex(idx, ts, mutation_pool)
if idx >= i:
yield (idx, ts, value)
idx += 1 | module function_definition identifier parameters identifier identifier default_parameter identifier none block expression_statement call attribute identifier identifier argument_list expression_statement assignment identifier integer expression_statement assignment identifier integer if_statement comparison_operator identifier attribute identifier identifier block expression_statement assignment identifier call identifier argument_list tuple integer integer tuple subscript subscript attribute identifier identifier attribute identifier identifier integer binary_operator subscript subscript attribute identifier identifier attribute identifier identifier integer integer expression_statement assignment identifier attribute identifier identifier else_clause block try_statement block expression_statement assignment identifier binary_operator identifier binary_operator identifier attribute identifier identifier expression_statement assignment identifier tuple call identifier argument_list integer subscript subscript attribute identifier identifier identifier integer binary_operator subscript subscript attribute identifier identifier identifier integer integer expression_statement assignment identifier identifier except_clause identifier block pass_statement if_statement comparison_operator identifier none block expression_statement augmented_assignment identifier binary_operator identifier identifier with_statement with_clause with_item as_pattern call attribute attribute identifier identifier identifier argument_list as_pattern_target identifier block for_statement tuple_pattern identifier identifier call attribute identifier identifier argument_list keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier true block expression_statement call attribute identifier identifier argument_list identifier identifier identifier if_statement comparison_operator identifier identifier block expression_statement yield tuple identifier identifier identifier expression_statement augmented_assignment identifier integer | Scan records starting with index i. |
def flatten(cls, stats):
flat_children = {}
for _stats in spread_stats(stats):
key = (_stats.name, _stats.filename, _stats.lineno, _stats.module)
try:
flat_stats = flat_children[key]
except KeyError:
flat_stats = flat_children[key] = cls(*key)
flat_stats.own_hits += _stats.own_hits
flat_stats.deep_hits += _stats.deep_hits
flat_stats.own_time += _stats.own_time
flat_stats.deep_time += _stats.deep_time
children = list(itervalues(flat_children))
return cls(stats.name, stats.filename, stats.lineno, stats.module,
stats.own_hits, stats.deep_hits, stats.own_time,
stats.deep_time, children) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier dictionary for_statement identifier call identifier argument_list identifier block expression_statement assignment identifier tuple attribute identifier identifier attribute identifier identifier attribute identifier identifier attribute identifier identifier try_statement block expression_statement assignment identifier subscript identifier identifier except_clause identifier block expression_statement assignment identifier assignment subscript identifier identifier call identifier argument_list list_splat identifier expression_statement augmented_assignment attribute identifier identifier attribute identifier identifier expression_statement augmented_assignment attribute identifier identifier attribute identifier identifier expression_statement augmented_assignment attribute identifier identifier attribute identifier identifier expression_statement augmented_assignment attribute identifier identifier attribute identifier identifier expression_statement assignment identifier call identifier argument_list call identifier argument_list identifier return_statement call identifier argument_list attribute identifier identifier attribute identifier identifier attribute identifier identifier attribute identifier identifier attribute identifier identifier attribute identifier identifier attribute identifier identifier attribute identifier identifier identifier | Makes a flat statistics from the given statistics. |
def mcube(self, **kwargs):
kwargs_copy = self.base_dict.copy()
kwargs_copy.update(**kwargs)
kwargs_copy['dataset'] = kwargs.get('dataset', self.dataset(**kwargs))
kwargs_copy['component'] = kwargs.get(
'component', self.component(**kwargs))
self._replace_none(kwargs_copy)
localpath = NameFactory.mcube_format.format(**kwargs_copy)
if kwargs.get('fullpath', False):
return self.fullpath(localpath=localpath)
return localpath | module function_definition identifier parameters identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list expression_statement call attribute identifier identifier argument_list dictionary_splat identifier expression_statement assignment subscript identifier string string_start string_content string_end call attribute identifier identifier argument_list string string_start string_content string_end call attribute identifier identifier argument_list dictionary_splat identifier expression_statement assignment subscript identifier string string_start string_content string_end call attribute identifier identifier argument_list string string_start string_content string_end call attribute identifier identifier argument_list dictionary_splat identifier expression_statement call attribute identifier identifier argument_list identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list dictionary_splat identifier if_statement call attribute identifier identifier argument_list string string_start string_content string_end false block return_statement call attribute identifier identifier argument_list keyword_argument identifier identifier return_statement identifier | return the name of a model cube file |
def _check_consistency(self):
type_count = defaultdict(int)
for _, section in sorted(self.sections.items()):
type_count[section.section_type] += 1
if type_count[POINT_TYPE.SOMA] != 1:
L.info('Have %d somas, expected 1', type_count[POINT_TYPE.SOMA]) | module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list identifier for_statement pattern_list identifier identifier call identifier argument_list call attribute attribute identifier identifier identifier argument_list block expression_statement augmented_assignment subscript identifier attribute identifier identifier integer if_statement comparison_operator subscript identifier attribute identifier identifier integer block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end subscript identifier attribute identifier identifier | see if the sections have obvious errors |
def reset(self, relation_name=None):
if relation_name is not None:
self.data_access.delete("relations", dict(name=relation_name))
else:
self.data_access.delete("relations", "1=1")
return self | module function_definition identifier parameters identifier default_parameter identifier none block if_statement comparison_operator identifier none block expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end call identifier argument_list keyword_argument identifier identifier else_clause block expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end string string_start string_content string_end return_statement identifier | Reset the transfer info for a particular relation, or if none is given, for all relations. |
def dmsStrToDeg(dec):
sign_deg, min, sec = dec.split(':')
sign = sign_deg[0:1]
if sign not in ('+', '-'):
sign = '+'
deg = sign_deg
else:
deg = sign_deg[1:]
dec_deg = decTimeToDeg(sign, int(deg), int(min), float(sec))
return dec_deg | module function_definition identifier parameters identifier block expression_statement assignment pattern_list identifier identifier identifier call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier subscript identifier slice integer integer if_statement comparison_operator identifier tuple string string_start string_content string_end string string_start string_content string_end block expression_statement assignment identifier string string_start string_content string_end expression_statement assignment identifier identifier else_clause block expression_statement assignment identifier subscript identifier slice integer expression_statement assignment identifier call identifier argument_list identifier call identifier argument_list identifier call identifier argument_list identifier call identifier argument_list identifier return_statement identifier | Convert a string representation of DEC into a float in degrees. |
def create_delete_model(record):
arn = f"arn:aws:s3:::{cloudwatch.filter_request_parameters('bucketName', record)}"
LOG.debug(f'[-] Deleting Dynamodb Records. Hash Key: {arn}')
data = {
'arn': arn,
'principalId': cloudwatch.get_principal(record),
'userIdentity': cloudwatch.get_user_identity(record),
'accountId': record['account'],
'eventTime': record['detail']['eventTime'],
'BucketName': cloudwatch.filter_request_parameters('bucketName', record),
'Region': cloudwatch.get_region(record),
'Tags': {},
'configuration': {},
'eventSource': record['detail']['eventSource'],
'version': VERSION
}
return CurrentS3Model(**data) | module function_definition identifier parameters identifier block expression_statement assignment identifier string string_start string_content interpolation call attribute identifier identifier argument_list string string_start string_content string_end identifier string_end expression_statement call attribute identifier identifier argument_list string string_start string_content interpolation identifier string_end expression_statement assignment identifier dictionary pair string string_start string_content string_end identifier pair string string_start string_content string_end call attribute identifier identifier argument_list identifier pair string string_start string_content string_end call attribute identifier identifier argument_list identifier pair string string_start string_content string_end subscript identifier string string_start string_content string_end pair string string_start string_content string_end subscript subscript identifier string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end call attribute identifier identifier argument_list string string_start string_content string_end identifier pair string string_start string_content string_end call attribute identifier identifier argument_list identifier pair string string_start string_content string_end dictionary pair string string_start string_content string_end dictionary pair string string_start string_content string_end subscript subscript identifier string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end identifier return_statement call identifier argument_list dictionary_splat identifier | Create an S3 model from a record. |
def field_datetime_from_json(self, json_val):
if type(json_val) == int:
seconds = int(json_val)
dt = datetime.fromtimestamp(seconds, utc)
elif json_val is None:
dt = None
else:
seconds, microseconds = [int(x) for x in json_val.split('.')]
dt = datetime.fromtimestamp(seconds, utc)
dt += timedelta(microseconds=microseconds)
return dt | module function_definition identifier parameters identifier identifier block if_statement comparison_operator call identifier argument_list identifier identifier block expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier identifier elif_clause comparison_operator identifier none block expression_statement assignment identifier none else_clause block expression_statement assignment pattern_list identifier identifier list_comprehension call identifier argument_list identifier for_in_clause identifier call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list identifier identifier expression_statement augmented_assignment identifier call identifier argument_list keyword_argument identifier identifier return_statement identifier | Convert a UTC timestamp to a UTC datetime. |
def _summarize_result(self, root_action, leaf_eot):
root_board = root_action.parent.board
action_detail = root_action.position_pair
score = self._relative_score(root_action, leaf_eot,
root_action.parent.player,
root_action.parent.opponent)
total_leaves = 0
mana_drain_leaves = 0
for leaf in root_action.leaves():
total_leaves += 1
if leaf.is_mana_drain:
mana_drain_leaves += 1
summary = base.Summary(root_board, action_detail, score,
mana_drain_leaves, total_leaves)
return summary | module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier attribute attribute identifier identifier identifier expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier identifier attribute attribute identifier identifier identifier attribute attribute identifier identifier identifier expression_statement assignment identifier integer expression_statement assignment identifier integer for_statement identifier call attribute identifier identifier argument_list block expression_statement augmented_assignment identifier integer if_statement attribute identifier identifier block expression_statement augmented_assignment identifier integer expression_statement assignment identifier call attribute identifier identifier argument_list identifier identifier identifier identifier identifier return_statement identifier | Return a dict with useful information that summarizes this action. |
def pauli_product(*elements: Pauli) -> Pauli:
result_terms = []
for terms in product(*elements):
coeff = reduce(mul, [term[1] for term in terms])
ops = (term[0] for term in terms)
out = []
key = itemgetter(0)
for qubit, qops in groupby(heapq.merge(*ops, key=key), key=key):
res = next(qops)[1]
for op in qops:
pair = res + op[1]
res, rescoeff = PAULI_PROD[pair]
coeff *= rescoeff
if res != 'I':
out.append((qubit, res))
p = Pauli(((tuple(out), coeff),))
result_terms.append(p)
return pauli_sum(*result_terms) | module function_definition identifier parameters typed_parameter list_splat_pattern identifier type identifier type identifier block expression_statement assignment identifier list for_statement identifier call identifier argument_list list_splat identifier block expression_statement assignment identifier call identifier argument_list identifier list_comprehension subscript identifier integer for_in_clause identifier identifier expression_statement assignment identifier generator_expression subscript identifier integer for_in_clause identifier identifier expression_statement assignment identifier list expression_statement assignment identifier call identifier argument_list integer for_statement pattern_list identifier identifier call identifier argument_list call attribute identifier identifier argument_list list_splat identifier keyword_argument identifier identifier keyword_argument identifier identifier block expression_statement assignment identifier subscript call identifier argument_list identifier integer for_statement identifier identifier block expression_statement assignment identifier binary_operator identifier subscript identifier integer expression_statement assignment pattern_list identifier identifier subscript identifier identifier expression_statement augmented_assignment identifier identifier if_statement comparison_operator identifier string string_start string_content string_end block expression_statement call attribute identifier identifier argument_list tuple identifier identifier expression_statement assignment identifier call identifier argument_list tuple tuple call identifier argument_list identifier identifier expression_statement call attribute identifier identifier argument_list identifier return_statement call identifier argument_list list_splat identifier | Return the product of elements of the Pauli algebra |
def install_egg(self, egg_name):
if not os.path.exists(self.egg_directory):
os.makedirs(self.egg_directory)
self.requirement_set.add_requirement(
InstallRequirement.from_line(egg_name, None))
try:
self.requirement_set.prepare_files(self.finder)
self.requirement_set.install(['--prefix=' + self.egg_directory], [])
except DistributionNotFound:
self.requirement_set.requirements._keys.remove(egg_name)
raise PipException() | module function_definition identifier parameters identifier identifier block if_statement not_operator call attribute attribute identifier identifier identifier argument_list attribute identifier identifier block expression_statement call attribute identifier identifier argument_list attribute identifier identifier expression_statement call attribute attribute identifier identifier identifier argument_list call attribute identifier identifier argument_list identifier none try_statement block expression_statement call attribute attribute identifier identifier identifier argument_list attribute identifier identifier expression_statement call attribute attribute identifier identifier identifier argument_list list binary_operator string string_start string_content string_end attribute identifier identifier list except_clause identifier block expression_statement call attribute attribute attribute attribute identifier identifier identifier identifier identifier argument_list identifier raise_statement call identifier argument_list | Install an egg into the egg directory |
def _log_statistics(self):
rows_per_second_trans = self._count_total / (self._time1 - self._time0)
rows_per_second_load = self._count_transform / (self._time2 - self._time1)
rows_per_second_overall = self._count_total / (self._time3 - self._time0)
self._log('Number of rows processed : {0:d}'.format(self._count_total))
self._log('Number of rows transformed : {0:d}'.format(self._count_transform))
self._log('Number of rows ignored : {0:d}'.format(self._count_ignore))
self._log('Number of rows parked : {0:d}'.format(self._count_park))
self._log('Number of errors : {0:d}'.format(self._count_error))
self._log('Number of rows per second processed : {0:d}'.format(int(rows_per_second_trans)))
self._log('Number of rows per second loaded : {0:d}'.format(int(rows_per_second_load)))
self._log('Number of rows per second overall : {0:d}'.format(int(rows_per_second_overall))) | module function_definition identifier parameters identifier block expression_statement assignment identifier binary_operator attribute identifier identifier parenthesized_expression binary_operator attribute identifier identifier attribute identifier identifier expression_statement assignment identifier binary_operator attribute identifier identifier parenthesized_expression binary_operator attribute identifier identifier attribute identifier identifier expression_statement assignment identifier binary_operator attribute identifier identifier parenthesized_expression binary_operator attribute identifier identifier attribute identifier identifier expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content string_end identifier argument_list attribute identifier identifier expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content string_end identifier argument_list attribute identifier identifier expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content string_end identifier argument_list attribute identifier identifier expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content string_end identifier argument_list attribute identifier identifier expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content string_end identifier argument_list attribute identifier identifier expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content string_end identifier argument_list call identifier argument_list identifier expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content string_end identifier argument_list call identifier argument_list identifier expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content string_end identifier argument_list call identifier argument_list identifier | Log statistics about the number of rows and number of rows per second. |
def _flush_stack(self):
output = self._postprocess_output(''.join(self.stack))
self._clear_char()
self._empty_stack()
if not PYTHON_2:
return output
else:
return unicode(output) | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list call attribute string string_start string_end identifier argument_list attribute identifier identifier expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list if_statement not_operator identifier block return_statement identifier else_clause block return_statement call identifier argument_list identifier | Returns the final output and resets the machine's state. |
def _parse(read_method: Callable) -> HTTPResponse:
response = read_method(4096)
while b'HTTP/' not in response or b'\r\n\r\n' not in response:
response += read_method(4096)
fake_sock = _FakeSocket(response)
response = HTTPResponse(fake_sock)
response.begin()
return response | module function_definition identifier parameters typed_parameter identifier type identifier type identifier block expression_statement assignment identifier call identifier argument_list integer while_statement boolean_operator comparison_operator string string_start string_content string_end identifier comparison_operator string string_start string_content escape_sequence escape_sequence escape_sequence escape_sequence string_end identifier block expression_statement augmented_assignment identifier call identifier argument_list integer expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier call identifier argument_list identifier expression_statement call attribute identifier identifier argument_list return_statement identifier | Trick to standardize the API between sockets and SSLConnection objects. |
def _ExtractList(self, fields, ignores=(",",), terminators=()):
extracted = []
i = 0
for i, field in enumerate(fields):
if field in ignores:
continue
if field in terminators:
break
extracted.append(field.strip("".join(ignores)))
if not (field.endswith(",") or
set(fields[i + 1:i + 2]).intersection(ignores)):
break
return extracted, fields[i + 1:] | module function_definition identifier parameters identifier identifier default_parameter identifier tuple string string_start string_content string_end default_parameter identifier tuple block expression_statement assignment identifier list expression_statement assignment identifier integer for_statement pattern_list identifier identifier call identifier argument_list identifier block if_statement comparison_operator identifier identifier block continue_statement if_statement comparison_operator identifier identifier block break_statement expression_statement call attribute identifier identifier argument_list call attribute identifier identifier argument_list call attribute string string_start string_end identifier argument_list identifier if_statement not_operator parenthesized_expression boolean_operator call attribute identifier identifier argument_list string string_start string_content string_end call attribute call identifier argument_list subscript identifier slice binary_operator identifier integer binary_operator identifier integer identifier argument_list identifier block break_statement return_statement expression_list identifier subscript identifier slice binary_operator identifier integer | Extract a list from the given fields. |
def count_elements(doc):
"Counts the number of times each element is used in a document"
summary = {}
for el in doc.iter():
try:
namespace, element_name = re.search('^{(.+)}(.+)$', el.tag).groups()
except:
namespace = None
element_name = el.tag
if not summary.has_key(namespace):
summary[namespace] = {}
if not summary[namespace].has_key(element_name):
summary[namespace][element_name] = 1
else:
summary[namespace][element_name] += 1
return summary | module function_definition identifier parameters identifier block expression_statement string string_start string_content string_end expression_statement assignment identifier dictionary for_statement identifier call attribute identifier identifier argument_list block try_statement block expression_statement assignment pattern_list identifier identifier call attribute call attribute identifier identifier argument_list string string_start string_content string_end attribute identifier identifier identifier argument_list except_clause block expression_statement assignment identifier none expression_statement assignment identifier attribute identifier identifier if_statement not_operator call attribute identifier identifier argument_list identifier block expression_statement assignment subscript identifier identifier dictionary if_statement not_operator call attribute subscript identifier identifier identifier argument_list identifier block expression_statement assignment subscript subscript identifier identifier identifier integer else_clause block expression_statement augmented_assignment subscript subscript identifier identifier identifier integer return_statement identifier | Counts the number of times each element is used in a document |
def find_bound_ports(self, ports):
bound = []
for port in ports:
s = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
try:
s.bind((port.ip if port.ip is not NotSpecified else "127.0.0.1", port.host_port))
except socket.error as error:
bound.append(port.host_port)
finally:
s.close()
if bound:
raise AlreadyBoundPorts(ports=bound) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier list for_statement identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list attribute identifier identifier attribute identifier identifier try_statement block expression_statement call attribute identifier identifier argument_list tuple conditional_expression attribute identifier identifier comparison_operator attribute identifier identifier identifier string string_start string_content string_end attribute identifier identifier except_clause as_pattern attribute identifier identifier as_pattern_target identifier block expression_statement call attribute identifier identifier argument_list attribute identifier identifier finally_clause block expression_statement call attribute identifier identifier argument_list if_statement identifier block raise_statement call identifier argument_list keyword_argument identifier identifier | Find any ports that are already bound and complain about them |
def preScale(self, sx, sy):
self.a *= sx
self.b *= sx
self.c *= sy
self.d *= sy
return self | module function_definition identifier parameters identifier identifier identifier block expression_statement augmented_assignment attribute identifier identifier identifier expression_statement augmented_assignment attribute identifier identifier identifier expression_statement augmented_assignment attribute identifier identifier identifier expression_statement augmented_assignment attribute identifier identifier identifier return_statement identifier | Calculate pre scaling and replace current matrix. |
def available_state_for_gene(self, gene: Gene, state: State) -> Tuple[State, ...]:
result: List[State] = []
active_multiplex: Tuple[Multiplex] = gene.active_multiplex(state)
transition: Transition = self.find_transition(gene, active_multiplex)
current_state: int = state[gene]
done = set()
for target_state in transition.states:
target_state: int = self._state_after_transition(current_state, target_state)
if target_state not in done:
done.add(target_state)
new_state: State = state.copy()
new_state[gene] = target_state
result.append(new_state)
return tuple(result) | module function_definition identifier parameters identifier typed_parameter identifier type identifier typed_parameter identifier type identifier type generic_type identifier type_parameter type identifier type ellipsis block expression_statement assignment identifier type generic_type identifier type_parameter type identifier list expression_statement assignment identifier type generic_type identifier type_parameter type identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier type identifier call attribute identifier identifier argument_list identifier identifier expression_statement assignment identifier type identifier subscript identifier identifier expression_statement assignment identifier call identifier argument_list for_statement identifier attribute identifier identifier block expression_statement assignment identifier type identifier call attribute identifier identifier argument_list identifier identifier if_statement comparison_operator identifier identifier block expression_statement call attribute identifier identifier argument_list identifier expression_statement assignment identifier type identifier call attribute identifier identifier argument_list expression_statement assignment subscript identifier identifier identifier expression_statement call attribute identifier identifier argument_list identifier return_statement call identifier argument_list identifier | Return the state reachable from a given state for a particular gene. |
def make_sh_address(script_string, witness=False, cashaddr=True):
script_bytes = script_ser.serialize(script_string)
return _ser_script_to_sh_address(
script_bytes=script_bytes,
witness=witness,
cashaddr=cashaddr) | module function_definition identifier parameters identifier default_parameter identifier false default_parameter identifier true block expression_statement assignment identifier call attribute identifier identifier argument_list identifier return_statement call identifier argument_list keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier | str, bool, bool -> str |
def _at_exit(self):
if self.process_exit:
try:
term = self.term
if self.set_scroll:
term.reset()
else:
term.move_to(0, term.height)
self.term.feed()
except ValueError:
pass | module function_definition identifier parameters identifier block if_statement attribute identifier identifier block try_statement block expression_statement assignment identifier attribute identifier identifier if_statement attribute identifier identifier block expression_statement call attribute identifier identifier argument_list else_clause block expression_statement call attribute identifier identifier argument_list integer attribute identifier identifier expression_statement call attribute attribute identifier identifier identifier argument_list except_clause identifier block pass_statement | Resets terminal to normal configuration |
def add_log_options(self, verbose_func=None, quiet_func=None):
if not verbose_func:
def verbose_func():
return log.config(verbose=True)
if not quiet_func:
def quiet_func():
return log.config(quiet=True)
self.option('-v, --verbose', 'show more logs', verbose_func)
self.option('-q, --quiet', 'show less logs', quiet_func)
return self | module function_definition identifier parameters identifier default_parameter identifier none default_parameter identifier none block if_statement not_operator identifier block function_definition identifier parameters block return_statement call attribute identifier identifier argument_list keyword_argument identifier true if_statement not_operator identifier block function_definition identifier parameters block return_statement call attribute identifier identifier argument_list keyword_argument identifier true expression_statement call attribute identifier identifier argument_list string string_start string_content string_end string string_start string_content string_end identifier expression_statement call attribute identifier identifier argument_list string string_start string_content string_end string string_start string_content string_end identifier return_statement identifier | A helper for setting up log options |
def setup(interactive, not_relative, dry_run, reset, root_dir, testuser):
click.echo("[cellpy] (setup)")
init_filename = create_custom_init_filename()
userdir, dst_file = get_user_dir_and_dst(init_filename)
if testuser:
if not root_dir:
root_dir = os.getcwd()
click.echo(f"[cellpy] (setup) DEV-MODE testuser: {testuser}")
init_filename = create_custom_init_filename(testuser)
userdir = root_dir
dst_file = get_dst_file(userdir, init_filename)
click.echo(f"[cellpy] (setup) DEV-MODE userdir: {userdir}")
click.echo(f"[cellpy] (setup) DEV-MODE dst_file: {dst_file}")
if not pathlib.Path(dst_file).is_file():
reset = True
if interactive:
click.echo(" interactive mode ".center(80, "-"))
_update_paths(root_dir, not not_relative, dry_run=dry_run, reset=reset)
_write_config_file(
userdir, dst_file,
init_filename, dry_run,
)
_check()
else:
_write_config_file(userdir, dst_file, init_filename, dry_run)
_check() | module function_definition identifier parameters identifier identifier identifier identifier identifier identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier call identifier argument_list expression_statement assignment pattern_list identifier identifier call identifier argument_list identifier if_statement identifier block if_statement not_operator identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list string string_start string_content interpolation identifier string_end expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier identifier expression_statement assignment identifier call identifier argument_list identifier identifier expression_statement call attribute identifier identifier argument_list string string_start string_content interpolation identifier string_end expression_statement call attribute identifier identifier argument_list string string_start string_content interpolation identifier string_end if_statement not_operator call attribute call attribute identifier identifier argument_list identifier identifier argument_list block expression_statement assignment identifier true if_statement identifier block expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content string_end identifier argument_list integer string string_start string_content string_end expression_statement call identifier argument_list identifier not_operator identifier keyword_argument identifier identifier keyword_argument identifier identifier expression_statement call identifier argument_list identifier identifier identifier identifier expression_statement call identifier argument_list else_clause block expression_statement call identifier argument_list identifier identifier identifier identifier expression_statement call identifier argument_list | This will help you to setup cellpy. |
def download_file(url, path, session=None, params=None):
if url[0:2] == '//':
url = 'https://' + url[2:]
tmp_path = path + '.tmp'
if session and params:
r = session.get( url, params=params, stream=True )
elif session and not params:
r = session.get( url, stream=True )
else:
r = requests.get(url, stream=True)
with open(tmp_path, 'wb') as f:
total_length = int(r.headers.get('content-length', 0))
for chunk in progress.bar(r.iter_content(chunk_size=1024), expected_size=(total_length / 1024) + 1):
if chunk:
f.write(chunk)
f.flush()
os.rename(tmp_path, path)
return path | module function_definition identifier parameters identifier identifier default_parameter identifier none default_parameter identifier none block if_statement comparison_operator subscript identifier slice integer integer string string_start string_content string_end block expression_statement assignment identifier binary_operator string string_start string_content string_end subscript identifier slice integer expression_statement assignment identifier binary_operator identifier string string_start string_content string_end if_statement boolean_operator identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier keyword_argument identifier identifier keyword_argument identifier true elif_clause boolean_operator identifier not_operator identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier keyword_argument identifier true else_clause block expression_statement assignment identifier call attribute identifier identifier argument_list identifier keyword_argument identifier true with_statement with_clause with_item as_pattern call identifier argument_list identifier string string_start string_content string_end as_pattern_target identifier block expression_statement assignment identifier call identifier argument_list call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end integer for_statement identifier call attribute identifier identifier argument_list call attribute identifier identifier argument_list keyword_argument identifier integer keyword_argument identifier binary_operator parenthesized_expression binary_operator identifier integer integer block if_statement identifier block expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list identifier identifier return_statement identifier | Download an individual file. |
def getGenomeList() :
import rabaDB.filters as rfilt
f = rfilt.RabaQuery(Genome_Raba)
names = []
for g in f.iterRun() :
names.append(g.name)
return names | module function_definition identifier parameters block import_statement aliased_import dotted_name identifier identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier list for_statement identifier call attribute identifier identifier argument_list block expression_statement call attribute identifier identifier argument_list attribute identifier identifier return_statement identifier | Return the names of all imported genomes |
def info(self):
url = "{}/v7/finance/quote?symbols={}".format(
self._base_url, self.ticker)
r = _requests.get(url=url).json()["quoteResponse"]["result"]
if len(r) > 0:
return r[0]
return {} | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute string string_start string_content string_end identifier argument_list attribute identifier identifier attribute identifier identifier expression_statement assignment identifier subscript subscript call attribute call attribute identifier identifier argument_list keyword_argument identifier identifier identifier argument_list string string_start string_content string_end string string_start string_content string_end if_statement comparison_operator call identifier argument_list identifier integer block return_statement subscript identifier integer return_statement dictionary | retreive metadata and currenct price data |
def delete(self, key):
obj = self._get_content()
obj.pop(key, None)
self.write_data(self.path, obj) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list identifier none expression_statement call attribute identifier identifier argument_list attribute identifier identifier identifier | Removes the specified key from the database. |
def _get(pseudodict, key, single=True):
matches = [item[1] for item in pseudodict if item[0] == key]
if single:
return matches[0]
else:
return matches | module function_definition identifier parameters identifier identifier default_parameter identifier true block expression_statement assignment identifier list_comprehension subscript identifier integer for_in_clause identifier identifier if_clause comparison_operator subscript identifier integer identifier if_statement identifier block return_statement subscript identifier integer else_clause block return_statement identifier | Helper method for getting values from "multi-dict"s |
def tick_clients(self):
if not self._ticker:
self._create_ticker()
for client in self.clients.values():
self._ticker.tick(client) | module function_definition identifier parameters identifier block if_statement not_operator attribute identifier identifier block expression_statement call attribute identifier identifier argument_list for_statement identifier call attribute attribute identifier identifier identifier argument_list block expression_statement call attribute attribute identifier identifier identifier argument_list identifier | Trigger the periodic tick function in the client. |
def _ascii_find_urls(bytes, mimetype, extra_tokens=True):
tokens = _tokenize(bytes, mimetype, extra_tokens=extra_tokens)
return tokens | module function_definition identifier parameters identifier identifier default_parameter identifier true block expression_statement assignment identifier call identifier argument_list identifier identifier keyword_argument identifier identifier return_statement identifier | This function finds URLs inside of ASCII bytes. |
def open_in_browser(self, outfile):
if self.browser == 'default':
webbrowser.open('file://%s' % outfile)
else:
browser = webbrowser.get(self.browser)
browser.open('file://%s' % outfile) | module function_definition identifier parameters identifier identifier block if_statement comparison_operator attribute identifier identifier string string_start string_content string_end block expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end identifier else_clause block expression_statement assignment identifier call attribute identifier identifier argument_list attribute identifier identifier expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end identifier | Open the given HTML file in a browser. |
def updater(f):
"Decorate a function with named arguments into updater for transact"
@functools.wraps(f)
def wrapped_updater(keys, values):
result = f(*values)
return (keys[:len(result)], result)
return wrapped_updater | module function_definition identifier parameters identifier block expression_statement string string_start string_content string_end decorated_definition decorator call attribute identifier identifier argument_list identifier function_definition identifier parameters identifier identifier block expression_statement assignment identifier call identifier argument_list list_splat identifier return_statement tuple subscript identifier slice call identifier argument_list identifier identifier return_statement identifier | Decorate a function with named arguments into updater for transact |
def onlyOnce(fn):
'Set up FN to only run once within an interpreter instance'
def wrap(*args, **kwargs):
if hasattr(fn, 'called'):
return
fn.called = 1
return fn(*args, **kwargs)
util.mergeFunctionMetadata(fn, wrap)
return wrap | module function_definition identifier parameters identifier block expression_statement string string_start string_content string_end function_definition identifier parameters list_splat_pattern identifier dictionary_splat_pattern identifier block if_statement call identifier argument_list identifier string string_start string_content string_end block return_statement expression_statement assignment attribute identifier identifier integer return_statement call identifier argument_list list_splat identifier dictionary_splat identifier expression_statement call attribute identifier identifier argument_list identifier identifier return_statement identifier | Set up FN to only run once within an interpreter instance |
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