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(module (function_definition (function_name__write_cache) function_name__write_cache (parameters (identifier_self) identifier_self (identifier_lines) identifier_lines (default_parameter (identifier_append) identifier_append (False) False )default_parameter )paramete...
Write virtualenv metadata to cache.
(module (function_definition (function_name_python_type) function_name_python_type (parameters (identifier_textx_type_name) identifier_textx_type_name )parameters (block (return_statement (call (attribute (dictionary (pair (string...
Return Python type from the name of base textx type.
(module (function_definition (function_name_process) function_name_process (parameters (identifier_self) identifier_self (identifier_metric) identifier_metric )parameters (block (if_statement (not_operator (identifier_boto) identifier_boto )not_operator ...
Process a metric and send it to CloudWatch
(module (function_definition (function_name_generate_docs) function_name_generate_docs (parameters (identifier_app) identifier_app )parameters (block (expression_statement (assignment (identifier_config) identifier_config (attribute (identifier_app) ...
Run sphinx-apidoc to generate Python API documentation for the project.
(module (function_definition (function_name__load_outcome_models) function_name__load_outcome_models (parameters (identifier_self) identifier_self )parameters (block (if_statement (not_operator (attribute (identifier_self) identifier_self (identifi...
Reloads the outcome models directly from the state
(module (function_definition (function_name_move_committees) function_name_move_committees (parameters (identifier_src) identifier_src (identifier_dest) identifier_dest )parameters (block (expression_statement (assignment (pattern_list (identifier_comm) ...
Import stupid yaml files, convert to something useful.
(module (function_definition (function_name_update_looking_for) function_name_update_looking_for (parameters (identifier_profile_tree) identifier_profile_tree (identifier_looking_for) identifier_looking_for )parameters (block (expression_statement (assignment (ident...
Update looking_for attribute of a Profile.
(module (function_definition (function_name_connection) function_name_connection (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (i...
get a cached connection from the pool
(module (function_definition (function_name_params) function_name_params (parameters (identifier_self) identifier_self (identifier_dict) identifier_dict )parameters (block (expression_statement (call (attribute (attribute (identifier_self) ...
Set configuration variables for an OnShape part.
(module (function_definition (function_name__fit_radec) function_name__fit_radec (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (attribute (attribute (attribute (identifier_self)...
call fit_radec of BK passing in the observations.
(module (function_definition (function_name_warning_free_pause) function_name_warning_free_pause (parameters )parameters (block (import_statement (aliased_import (dotted_name (identifier_matplotlib) identifier_matplotlib (identifier_pyplot) identifier_py...
Issue a matplotlib pause without the warning.
(module (function_definition (function_name_gevent_stop) function_name_gevent_stop (parameters (identifier_self) identifier_self )parameters (block (import_statement (dotted_name (identifier_gevent) identifier_gevent )dotted_name )import_statement (exp...
Helper method to stop the node for gevent-based applications.
(module (function_definition (function_name__morph) function_name__morph (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_scanner_paths) iden...
Turn a file system node into a File object.
(module (function_definition (function_name__find_common_roots) function_name__find_common_roots (parameters (identifier_paths) identifier_paths )parameters (block (expression_statement (assignment (identifier_paths) identifier_paths (list_comprehension ...
Out of some paths it finds the common roots that need monitoring.
(module (function_definition (function_name_dt64_to_dt) function_name_dt64_to_dt (parameters (identifier_dt64) identifier_dt64 )parameters (block (expression_statement (assignment (identifier_ts) identifier_ts (binary_operator (parenthesized_expressi...
Safely converts NumPy datetime64 to a datetime object.
(module (function_definition (function_name_make_hash) function_name_make_hash (parameters (identifier_s) identifier_s (identifier_n_bytes) identifier_n_bytes )parameters (block (expression_statement (assignment (identifier_raw_h) identifier_raw_h (call ...
Make the hash from a matches key.
(module (function_definition (function_name_search) function_name_search (parameters (identifier_self) identifier_self (identifier_spec) identifier_spec (identifier_operator) identifier_operator )parameters (block (return_statement (call (attribute ...
Query PYPI via XMLRPC interface using search spec
(module (function_definition (function_name_validate_answer) function_name_validate_answer (parameters (identifier_self) identifier_self (identifier_value) identifier_value )parameters (block (try_statement (block (expression_statement (assignment ...
Check that the answer is JSON-serializable and not too long.
(module (function_definition (function_name_create) function_name_create (parameters (identifier_cls) identifier_cls (identifier_name) identifier_name (identifier_email) identifier_email (identifier_cb) identifier_cb )parameters (block (expression_statement (assig...
Create the basic structure of a player
(module (function_definition (function_name_from_similars) function_name_from_similars (parameters (identifier_cls) identifier_cls (identifier_learn) identifier_learn (typed_default_parameter (identifier_layer_ls) identifier_layer_ls (type (identifier_list) identifi...
Gets the indices for the most similar images.
(module (function_definition (function_name_leaf_asts) function_name_leaf_asts (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_seen) identifier_seen (call (identifier_set) identifier_set ...
Return an iterator over the leaf ASTs.
(module (function_definition (function_name__initialize_recursion_depth) function_name__initialize_recursion_depth (parameters (identifier_self) identifier_self )parameters (block (import_from_statement (dotted_name (identifier_furious) identifier_furious (ident...
Ensure recursion info is initialized, if not, initialize it.
(module (function_definition (function_name_make_field_objects) function_name_make_field_objects (parameters (identifier_field_data) identifier_field_data (identifier_names) identifier_names )parameters (block (expression_statement (assignment (identifier_field_obje...
We're going to need to make message parameters too.
(module (function_definition (function_name__remove_deactivated) function_name__remove_deactivated (parameters (identifier_contexts) identifier_contexts )parameters (block (expression_statement (assignment (identifier_stack_contexts) identifier_stack_contexts (c...
Remove deactivated handlers from the chain
(module (function_definition (function_name_cursor) function_name_cursor (parameters (identifier_self) identifier_self )parameters (type (identifier_Cursor) identifier_Cursor )type (block (return_statement (call (identifier_Cursor) identifier_Cursor ...
Create an aiosqlite cursor wrapping a sqlite3 cursor object.
(module (function_definition (function_name__update_alpha) function_name__update_alpha (parameters (identifier_self) identifier_self (default_parameter (identifier_event) identifier_event (None) None )default_parameter )parameters (block (expression_statement ...
Update display after a change in the alpha spinbox.
(module (function_definition (function_name_setLog) function_name_setLog (parameters (identifier_self) identifier_self (identifier_fileName) identifier_fileName (default_parameter (identifier_writeName) identifier_writeName (False) False )default_parameter )paramete...
Opens a log file with name fileName.
(module (function_definition (function_name_jsonp_wrap) function_name_jsonp_wrap (parameters (default_parameter (identifier_callback_key) identifier_callback_key (string_'callback') string_'callback' )default_parameter )parameters (block (function_definition (...
Format response to jsonp and add a callback to JSON data - a jsonp request
(module (function_definition (function_name_peak_interval) function_name_peak_interval (parameters (identifier_self) identifier_self (identifier_name) identifier_name (default_parameter (identifier_alpha) identifier_alpha (identifier__alpha) identifier__alpha )default_p...
Calculate peak interval for parameter.
(module (function_definition (function_name_make_complete) function_name_make_complete (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (subscript (attribute (identifier_self) identifier_self ...
Turns the site collection into a complete one, if needed
(module (function_definition (function_name__wrap_unary_errors) function_name__wrap_unary_errors (parameters (identifier_callable_) identifier_callable_ )parameters (block (expression_statement (call (identifier__patch_callable_name) identifier__patch_callable_name ...
Map errors for Unary-Unary and Stream-Unary gRPC callables.
(module (function_definition (function_name_wordlist2cognates) function_name_wordlist2cognates (parameters (identifier_wordlist) identifier_wordlist (identifier_source) identifier_source (default_parameter (identifier_expert) identifier_expert (string_'expert') string_'expert...
Turn a wordlist into a cognate set list, using the cldf parameters.
(module (function_definition (function_name_read_bytes) function_name_read_bytes (parameters (identifier_self) identifier_self (identifier_path) identifier_path )parameters (block (expression_statement (assignment (identifier_file) identifier_file (call ...
Read file content in binary mode
(module (function_definition (function_name_task) function_name_task (parameters (default_parameter (identifier_obj) identifier_obj (None) None )default_parameter (default_parameter (identifier_deps) identifier_deps (None) None )default_parameter )pa...
Decorator for creating a task.
(module (function_definition (function_name_update_footer) function_name_update_footer (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_field_item) identifier_field_item (call (attribute ...
Update footer when the field list change.
(module (function_definition (function_name__global_index) function_name__global_index (parameters )parameters (block (expression_statement (assignment (identifier_var_and_type) identifier_var_and_type (binary_operator (identifier_var) identifier_var ...
Create grammar for a global index declaration
(module (function_definition (function_name_humanize_date) function_name_humanize_date (parameters (identifier_p_datetime) identifier_p_datetime )parameters (block (expression_statement (assignment (identifier_now) identifier_now (call (attribute ...
Returns a relative date string from a datetime object.
(module (function_definition (function_name_flow) function_name_flow (parameters (identifier_self) identifier_self )parameters (type (identifier_FlowField) identifier_FlowField )type (block (expression_statement (string_"Access the flow-field grid after applying queue...
Access the flow-field grid after applying queued affine transforms.
(module (function_definition (function_name_dump_dict) function_name_dump_dict (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_dump_dict) identifier_dump_dict (call (identifier_dict) iden...
Returns a dictionary representation of the structure.
(module (function_definition (function_name__check_file_corruption) function_name__check_file_corruption (parameters (identifier_self) identifier_self (identifier_header) identifier_header )parameters (block (if_statement (boolean_operator (boolean_operator ...
check for file corruption based on an unknown message type in the header
(module (function_definition (function_name_extract_number) function_name_extract_number (parameters (identifier_text) identifier_text )parameters (block (expression_statement (assignment (identifier_result) identifier_result (call (identifier_list) ...
Extract digit character from text.
(module (function_definition (function_name__get_yum_config_value) function_name__get_yum_config_value (parameters (identifier_name) identifier_name )parameters (block (expression_statement (assignment (identifier_conf) identifier_conf (call (identif...
Look for a specific config variable and return its value
(module (function_definition (function_name_index) function_name_index (parameters (identifier_request) identifier_request (identifier_page) identifier_page )parameters (block (expression_statement (assignment (identifier_days) identifier_days (list ...
Show the index page or any an offset of it.
(module (function_definition (function_name__full_to_yearly_ts) function_name__full_to_yearly_ts (parameters (identifier_self) identifier_self (identifier_arr) identifier_arr (identifier_dt) identifier_dt )parameters (block (expression_statement (assignment (i...
Average the full timeseries within each year.
(module (function_definition (function_name_expand_all_quays) function_name_expand_all_quays (parameters (identifier_self) identifier_self )parameters (type (None) None )type (block (if_statement (not_operator (attribute (identifier_self) identif...
Find all quays from stop places.
(module (function_definition (function_name__var_bounds) function_name__var_bounds (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_x0) identifier_x0 (call (identifier_array) identifier_ar...
Returns bounds on the optimisation variables.
(module (function_definition (function_name_connect) function_name_connect (parameters (identifier_db) identifier_db (default_parameter (identifier_host) identifier_host (identifier_HACR_DATABASE_SERVER) identifier_HACR_DATABASE_SERVER )default_parameter (default_parame...
Connect to the given SQL database
(module (function_definition (function_name_setup_logging) function_name_setup_logging (parameters )parameters (block (expression_statement (assignment (identifier_config) identifier_config (call (attribute (identifier_json) identifier_json ...
Utility function to setup the logging systems based on the `logging.json` configuration file
(module (function_definition (function_name_getPythonVarName) function_name_getPythonVarName (parameters (identifier_name) identifier_name )parameters (block (return_statement (call (attribute (call (attribute (identifier_SUB_REGE...
Get the python variable name
(module (function_definition (function_name__conv_adr) function_name__conv_adr (parameters (identifier_adr) identifier_adr (identifier_entry) identifier_entry )parameters (block (if_statement (attribute (attribute (identifier_adr) identifier_adr ...
Converts to Abook address format
(module (function_definition (function_name_update_model_cache) function_name_update_model_cache (parameters (identifier_table_name) identifier_table_name )parameters (block (expression_statement (assignment (identifier_model_cache_info) identifier_model_cache_info ...
Updates model cache by generating a new key for the model
(module (function_definition (function_name_sourcehook) function_name_sourcehook (parameters (identifier_self) identifier_self (identifier_newfile) identifier_newfile (default_parameter (identifier_encoding) identifier_encoding (string_'utf-8') string_'utf-8' )default_p...
Hook called on a filename to be sourced.
(module (function_definition (function_name__set_repo_option) function_name__set_repo_option (parameters (identifier_repo) identifier_repo (identifier_option) identifier_option )parameters (block (if_statement (not_operator (identifier_option) identifier_option ...
Set the option to repo
(module (function_definition (function_name_brent_optimise) function_name_brent_optimise (parameters (identifier_node1) identifier_node1 (identifier_node2) identifier_node2 (default_parameter (identifier_min_brlen) identifier_min_brlen (float_0.001) float_0.001 )default...
Optimise ML distance between two partials. min and max set brackets
(module (function_definition (function_name_before_func_accept_retry_state) function_name_before_func_accept_retry_state (parameters (identifier_fn) identifier_fn )parameters (block (if_statement (not_operator (call (attribute (identifier_six) id...
Wrap "before" function to accept "retry_state".
(module (function_definition (function_name_GetVmodlType) function_name_GetVmodlType (parameters (identifier_name) identifier_name )parameters (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_name) i...
Get type from vmodl name
(module (function_definition (function_name_openTrades) function_name_openTrades (parameters (identifier_self) identifier_self )parameters (type (generic_type (identifier_List) identifier_List (type_parameter (type (identifier_Trade) identifier_Trade ...
List of all open order trades.
(module (function_definition (function_name__use_absolute_file_name) function_name__use_absolute_file_name (parameters (identifier_self) identifier_self (identifier_img) identifier_img )parameters (block (expression_statement (assignment (subscript (iden...
Change relative filename to abosolute file name.
(module (function_definition (function_name__handle_cancel_notification) function_name__handle_cancel_notification (parameters (identifier_self) identifier_self (identifier_msg_id) identifier_msg_id )parameters (block (expression_statement (assignment (identifier_re...
Handle a cancel notification from the client.
(module (function_definition (function_name__iter_lexerclasses) function_name__iter_lexerclasses (parameters (default_parameter (identifier_plugins) identifier_plugins (True) True )default_parameter )parameters (block (for_statement (identifier_key) identifier...
Return an iterator over all lexer classes.
(module (function_definition (function_name_setFormatMetadata) function_name_setFormatMetadata (parameters (identifier_self) identifier_self (identifier_format) identifier_format )parameters (block (assert_statement (parenthesized_expression (boolean_operator ...
Set format image metadata to what has been reliably identified.
(module (function_definition (function_name_query) function_name_query (parameters (identifier_self) identifier_self (typed_parameter (identifier_sql) identifier_sql (type (identifier_str) identifier_str )type )typed_parameter (typed_default_parameter ...
Execute a SQL query with a return value.
(module (function_definition (function_name_publishToMyself) function_name_publishToMyself (parameters (identifier_self) identifier_self (identifier_roomId) identifier_roomId (identifier_name) identifier_name (identifier_data) identifier_data )parameters (block (expressio...
Publish to only myself
(module (function_definition (function_name_run) function_name_run (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_timer) identifier_timer ...
Span a background thread to periodically report queued spans
(module (function_definition (function_name_delaunay3D) function_name_delaunay3D (parameters (identifier_dataset) identifier_dataset (default_parameter (identifier_alpha) identifier_alpha (integer_0) integer_0 )default_parameter (default_parameter (identifier_to...
Create 3D Delaunay triangulation of input points.
(module (function_definition (function_name_execute_command) function_name_execute_command (parameters (identifier_self) identifier_self (list_splat_pattern (identifier_args) identifier_args )list_splat_pattern (dictionary_splat_pattern (identifier_kwargs) identifier_kw...
Execute a command on the connected server.
(module (function_definition (function_name_isDocumentCollection) function_name_isDocumentCollection (parameters (identifier_cls) identifier_cls (identifier_name) identifier_name )parameters (block (try_statement (block (expression_statement (assignment ...
return true or false wether 'name' is the name of a document collection.
(module (function_definition (function_name_read_sis_ini) function_name_read_sis_ini (parameters (identifier_fh) identifier_fh (identifier_byteorder) identifier_byteorder (identifier_dtype) identifier_dtype (identifier_count) identifier_count (identifier_offsetsize) identifier_of...
Read OlympusSIS INI string and return as dict.
(module (function_definition (function_name_sortframe) function_name_sortframe (parameters (identifier_frame) identifier_frame )parameters (block (expression_statement (assignment (identifier_d) identifier_d (subscript (identifier_frame) identifier_f...
sorts particles for a frame
(module (function_definition (function_name_center) function_name_center (parameters (identifier_self) identifier_self (identifier_X) identifier_X )parameters (block (expression_statement (assignment (identifier_X) identifier_X (call (attribute...
Center `X` in PCA space.
(module (function_definition (function_name___store_deactivated_components) function_name___store_deactivated_components (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_deactivated_components) identifier_deact...
Stores deactivated Components in settings file.
(module (function_definition (function_name_show) function_name_show (parameters (identifier_self) identifier_self (identifier_baseAppInstance) identifier_baseAppInstance )parameters (block (expression_statement (call (attribute (identifier_self) identif...
Allows to show the widget as root window
(module (function_definition (function_name__one_iteration) function_name__one_iteration (parameters (identifier_self) identifier_self (identifier_F) identifier_F (identifier_Ybus) identifier_Ybus (identifier_V) identifier_V (identifier_Vm) identifier_Vm (identifier_Va) ide...
Performs one Newton iteration.
(module (function_definition (function_name_as_dict) function_name_as_dict (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_d) identifier_d (dictionary )dictionary )assignment ...
Return a copy of the comment data in a real dict.
(module (function_definition (function_name_clear_cache) function_name_clear_cache (parameters (identifier_m) identifier_m (identifier_files_processed) identifier_files_processed )parameters (block (for_statement (pattern_list (identifier_what) identifier_what ...
Remove any files we may have uploaded from the cache.
(module (function_definition (function_name_table_formatter) function_name_table_formatter (parameters (identifier_self) identifier_self (identifier_dataframe) identifier_dataframe (default_parameter (identifier_inc_header) identifier_inc_header (integer_1) integer_1 )d...
Return a table formatter for the dataframe. Saves the user the need to import this class
(module (function_definition (function_name_pxe_netboot) function_name_pxe_netboot (parameters (identifier_self) identifier_self (identifier_filename) identifier_filename )parameters (block (expression_statement (assignment (identifier_new_port) identifier_new_port ...
Specify which file ipxe should load during the netboot.
(module (function_definition (function_name_create_archive) function_name_create_archive (parameters (identifier_archive) identifier_archive (identifier_filenames) identifier_filenames (default_parameter (identifier_verbosity) identifier_verbosity (integer_0) integer_0 ...
Create given archive with given files.
(module (function_definition (function_name_padded_variance_explained) function_name_padded_variance_explained (parameters (identifier_predictions) identifier_predictions (identifier_labels) identifier_labels (default_parameter (identifier_weights_fn) identifier_weights_fn (a...
Explained variance, also known as R^2.
(module (function_definition (function_name_create_index) function_name_create_index (parameters (identifier_modules) identifier_modules )parameters (block (for_statement (identifier_key) identifier_key (call (attribute (identifier_modules) identifier_...
This takes a dict of modules and created the RST index file.
(module (function_definition (function_name__expand_one_key_dictionary) function_name__expand_one_key_dictionary (parameters (identifier__dict) identifier__dict )parameters (block (expression_statement (assignment (identifier_key) identifier_key (call ...
Returns the only one key and it's value from a dictionary.
(module (function_definition (function_name__copy_context_into_mutable) function_name__copy_context_into_mutable (parameters (identifier_context) identifier_context )parameters (block (function_definition (function_name_make_mutable) function_name_make_mutable (parameters ...
Copy a properly formatted context into a mutable data structure.
(module (function_definition (function_name_login) function_name_login (parameters (identifier_self) identifier_self (default_parameter (identifier_command) identifier_command (string_'su -') string_'su -' )default_parameter (default_parameter (identifier_user) ...
Logs user in on default child.
(module (function_definition (function_name_check_theme) function_name_check_theme (parameters (identifier_theme) identifier_theme )parameters (block (expression_statement (assignment (identifier_terminal_colors) identifier_terminal_colors (conditional_expressio...
Check if the given theme is compatible with the terminal
(module (function_definition (function_name_reindex) function_name_reindex (parameters (identifier_report) identifier_report )parameters (block (expression_statement (assignment (identifier_index) identifier_index (call (identifier_list) identifier_l...
Reindex report so that 'TOTAL' is the last row
(module (function_definition (function_name_parse_line) function_name_parse_line (parameters (identifier_string) identifier_string )parameters (block (expression_statement (assignment (identifier_match) identifier_match (call (attribute ...
Parse a single string as traceback line
(module (function_definition (function_name_create_notification_rule) function_name_create_notification_rule (parameters (identifier_self) identifier_self (identifier_data) identifier_data (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern...
Create a notification rule for this user.
(module (function_definition (function_name_requestOpenOrders) function_name_requestOpenOrders (parameters (identifier_self) identifier_self (default_parameter (identifier_all_clients) identifier_all_clients (False) False )default_parameter )parameters (block (i...
Request open orders - loads up orders that wasn't created using this session
(module (function_definition (function_name__process_generic_param) function_name__process_generic_param (parameters (identifier_pval) identifier_pval (identifier_def_unit) identifier_def_unit (default_parameter (identifier_equivalencies) identifier_equivalencies (list ...
Process generic model parameter.
(module (function_definition (function_name_mapper) function_name_mapper (parameters (identifier_mapping) identifier_mapping (default_parameter (identifier__nt_name) identifier__nt_name (string_'NT') string_'NT' )default_parameter )parameters (block (if_statemen...
Convert mappings to namedtuples recursively.
(module (function_definition (function_name___getRefererUrl) function_name___getRefererUrl (parameters (identifier_self) identifier_self (default_parameter (identifier_url) identifier_url (None) None )default_parameter )parameters (block (if_statement (c...
gets the referer url for the token handler
(module (function_definition (function_name_palettebar) function_name_palettebar (parameters (identifier_height) identifier_height (identifier_length) identifier_length (identifier_colormap) identifier_colormap )parameters (block (expression_statement (assignment ...
Return the channels of a palettebar.
(module (function_definition (function_name_after_unassign) function_name_after_unassign (parameters (identifier_reference_analysis) identifier_reference_analysis )parameters (block (expression_statement (call (attribute (identifier_analysis_events) identifier...
Removes the reference analysis from the system
(module (function_definition (function_name_preloop) function_name_preloop (parameters (identifier_self) identifier_self )parameters (block (if_statement (not_operator (attribute (identifier_self) identifier_self (identifier_parser) identifier_pars...
if the parser is not already set, loads the parser.
(module (function_definition (function_name_board_fen) function_name_board_fen (parameters (identifier_self) identifier_self (keyword_separator )keyword_separator (typed_default_parameter (identifier_promoted) identifier_promoted (type (generic_type ...
Gets the board FEN.
(module (function_definition (function_name_headerData) function_name_headerData (parameters (identifier_self) identifier_self (identifier_section) identifier_section (identifier_orientation) identifier_orientation (identifier_role) identifier_role )parameters (block (if_...
Get the information to put in the header.
(module (function_definition (function_name__file_lines) function_name__file_lines (parameters (identifier_self) identifier_self (identifier_filename) identifier_filename )parameters (block (try_statement (block (return_statement (subscript ...
Get lines for filename, caching opened files.
(module (function_definition (function_name_expand_source_paths) function_name_expand_source_paths (parameters (identifier_paths) identifier_paths )parameters (block (for_statement (identifier_src_path) identifier_src_path (identifier_paths) identifier_paths (block ...
Convert pyc files into their source equivalents.
(module (function_definition (function_name_objectprep) function_name_objectprep (parameters (identifier_self) identifier_self )parameters (block (if_statement (attribute (identifier_self) identifier_self (identifier_bcltofastq) identifier_bcltofastq )at...
Creates fastq files from an in-progress Illumina MiSeq run or create an object and moves files appropriately
(module (function_definition (function_name_addCmdClass) function_name_addCmdClass (parameters (identifier_self) identifier_self (identifier_ctor) identifier_ctor (dictionary_splat_pattern (identifier_opts) identifier_opts )dictionary_splat_pattern )parameters (block ...
Add a Cmd subclass to this cli.