ascl_id stringclasses 752
values | repo_url stringclasses 737
values | file_path stringlengths 4 194 | content large_stringlengths 1 1M | language stringclasses 29
values | license_type stringclasses 24
values | size int64 1 1M |
|---|---|---|---|---|---|---|
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/mhd_currentSheet_3d.ini | #
# MHD 3D test parameter file; current sheet test
#
# http://www.astro.princeton.edu/~jstone/Athena/tests/current-sheet/current-sheet.html
#
[run]
tend=0.5
noutput=10
nstepmax=100
[mesh]
nx=64
ny=64
nz=32
# BoundaryConditionType :
# BC_UNDEFINED=0
# BC_DIRICHLET=1
# BC_NEUMANN=2
# BC_PERIODIC=3
boundary_xmin=3
bound... | Config | null | 956 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/orszag-tang_mpi.ini | #
# MHD 2D example parameter file; Orszag-Tang vortex test
#
# see http://www.astro.princeton.edu/~jstone/Athena/tests/orszag-tang/pagesource.html
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc.
[run]
tend=1.5
noutput=10
nstepmax=50
restart=no
restart_filename=orszag-... | Config | null | 1,152 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/jet2d_mpi_cpu.ini | #
# Hydro 2D example parameter file; jet simulation
#
# Converted from a fortran namelist containing
# various input parameters for HYDRO runs
[run]
tend=0.4
noutput=200
nstepmax=200
# define a 2D MPI cartesian mesh with mx x my MPI processes
[mpi]
mx=2
my=2
mz=1
# define the 2D problem for each MPI process
[mesh]
n... | Config | null | 978 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/implode3d_debug.ini | #
# Hydro 3D example parameter file; Hydrodynamical Implosion Test
#
# see the Athena test suite :
# http://www.astro.princeton.edu/~jstone/Athena/tests/implode/Implode.html
#
[run]
tend=0.4
noutput=1
nstepmax=5
[mesh]
nx=32
ny=32
nz=32
# BoundaryConditionType :
# BC_UNDEFINED=0
# BC_DIRICHLET=1
# BC_NEUMANN=2
# BC... | Config | null | 891 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/rayleigh_taylor_gpu_2d.ini | #
# Hydro 2D example parameter file; Rayleigh-Taylor simulation
#
# see Athena test suite web page :
# http://www.astro.princeton.edu/~jstone/Athena/tests/rt/rt.html
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc (especially when trace computations is involved).
#
# Con... | Config | null | 1,272 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/mhd_mri_3d_stratified.ini | #
# MHD 3D test parameter file;
# Magneto-Rotational Instability simulation with shearing box border
# conditions and isothermal equation of state.
#
# http://en.wikipedia.org/wiki/Magnetorotational_instability
# http://www.scholarpedia.org/article/Magnetorotational_instability
#
[run]
tend=630000
noutput=10
nstepmax... | Config | null | 1,374 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/mhd_shearWave_3d.ini | #
# MHD 3D test parameter file; inertial wave test
#
[run]
tend=8000
noutput=100
nstepmax=1000
[mesh]
nx=128
ny=64
nz=4
# BoundaryConditionType :
# BC_UNDEFINED=0
# BC_DIRICHLET=1
# BC_NEUMANN=2
# BC_PERIODIC=3
# BC_SHEARINGBOX=4 # only allowed for xmin/xmax
boundary_xmin=4
boundary_xmax=4
boundary_ymin=3
boundary_y... | Config | null | 951 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/kelvin_helmholtz_gpu_2d_large.ini | #
# Hydro 2D example parameter file; Kelvin-Helmholtz simulation
#
# see Athena test suite web page :
# http://www.astro.princeton.edu/~jstone/Athena/tests/kh/kh.html
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc (especially when trace computations is involved).
#
# Co... | Config | null | 1,479 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/implode3d_mpi.ini | #
# Hydro 3D example parameter file; Hydrodynamical Implosion Test
#
# see the Athena test suite :
# http://www.astro.princeton.edu/~jstone/Athena/tests/implode/Implode.html
#
[run]
tend=0.4
noutput=10
nstepmax=100
# define a 3D MPI cartesian mesh with mx x my x mz MPI processes
[mpi]
mx=2
my=2
mz=2
[mesh]
nx=20
ny... | Config | null | 948 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/mhd_rotor.ini | #
# MHD 2D test parameter file; Rotor simulation
#
# G. Toth, "The div(B)=0 constraint in shock-capturing MHD codes",
# JCP, 161, 605 (2000)
#
[run]
tend=0.5
noutput=1
nstepmax=10
[mesh]
nx=128
ny=128
nz=1
# BoundaryConditionType :
# BC_UNDEFINED=0
# BC_DIRICHLET=1
# BC_NEUMANN=2
# BC_PERIODIC=3
boundary_xmin=2
bound... | Config | null | 888 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/orszag-tang.ini | #
# MHD 2D example parameter file; Orszag-Tang vortex test
#
# see http://www.astro.princeton.edu/~jstone/Athena/tests/orszag-tang/pagesource.html
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc.
[run]
tend=1.5
noutput=10
nstepmax=50
restart=no
restart_filename=orszag-... | Config | null | 1,018 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/mhd_fieldloop3d_shear.ini | #
# MHD 3D test parameter file; field loop simulation with shearing box border
# conditions and isothermal equation of state.
#
# T. Gardiner & J.M. Stone, "An unsplit Godunov method for ideal MHD
# via constrined transport", JCP, 205, 509 (2005)
# http://www.astro.princeton.edu/~jstone/Athena/tests/field-loop/Field-lo... | Config | null | 1,254 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/mhd_mri_3d_mpi_debug.ini | #
# MHD 3D test parameter file;
# Magneto-Rotational Instability simulation with shearing box border
# conditions and isothermal equation of state.
#
# http://en.wikipedia.org/wiki/Magnetorotational_instability
# http://www.scholarpedia.org/article/Magnetorotational_instability
#
#
# This is a small MPI setup intende... | Config | null | 1,554 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/jet3d_cpu.ini | #
# Hydro 3D example parameter file; jet simulation
#
[run]
tend=0.4
noutput=20
nstepmax=800
[mesh]
nx=50
ny=50
nz=200
xmin=0
xmax=1
ymin=0
ymax=1
zmin=0
zmax=4
# BoundaryConditionType :
# BC_UNDEFINED=0
# BC_DIRICHLET=1
# BC_NEUMANN=2
# BC_PERIODIC=3
boundary_xmin=1
boundary_xmax=1
boundary_ymin=1
boundary_ymax=1
... | Config | null | 718 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/mhd_mri_3d_stratified_mpi.ini | #
# MHD 3D test parameter file;
# Magneto-Rotational Instability simulation with shearing box border
# conditions and isothermal equation of state.
#
# http://en.wikipedia.org/wiki/Magnetorotational_instability
# http://www.scholarpedia.org/article/Magnetorotational_instability
#
[run]
tend=630000
noutput=10
nstepmax... | Config | null | 1,399 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/kelvin_helmholtz_gpu_3d.ini | #
# Hydro 3D example parameter file; Kelvin-Helmholtz simulation
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc (especially when trace computations is involved).
#
# Converted from a fortran namelist containing
# various input parameters for HYDRO runs
[run]
tend=12.0
... | Config | null | 1,360 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/rayleigh_taylor_gpu_3d_mhd.ini | #
# Hydro 3D example parameter file; Rayleigh-Taylor simulation
#
# see Athena test suite web page :
# http://www.astro.princeton.edu/~jstone/Athena/tests/rt/rt.html
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc (especially when trace computations is involved).
#
# Con... | Config | null | 1,341 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/rayleigh_taylor_2d_mpi_mhd.ini | #
# MHD 2D example parameter file; Rayleigh-Taylor simulation
#
# see Athena test suite web page :
# http://www.astro.princeton.edu/~jstone/Athena/tests/rt/rt.html
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc (especially when trace computations is involved).
#
# Conve... | Config | null | 1,361 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/turbulence_mhd.ini | #
# 3D MHD turbulence example parameter file
#
[run]
tend=3.0
noutput=10
nstepmax=200
[mesh]
nx=32
ny=32
nz=32
xmin=0
xmax=1
ymin=0
ymax=1
zmin=0
zmax=1
# BoundaryConditionType :
# BC_UNDEFINED=0
# BC_DIRICHLET=1
# BC_NEUMANN=2
# BC_PERIODIC=3
boundary_xmin=3
boundary_xmax=3
boundary_ymin=3
boundary_ymax=3
boundary... | Config | null | 1,073 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/jet3d_mpi_gpu.ini | #
# Hydro 3D example parameter file; jet simulation
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc (especially when trace computations is involved).
#
# Converted from a fortran namelist containing
# various input parameters for HYDRO runs
[run]
tend=0.4
noutput=20
nst... | Config | null | 1,082 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/jet2d_cpu.ini | #
# Hydro 2D example parameter file; jet simulation
#
# Converted from a fortran namelist containing
# various input parameters for HYDRO runs
[run]
tend=0.2
noutput=100
nstepmax=2000
[mesh]
nx=200
ny=800
nz=1
xmin=0
xmax=1
ymin=0
ymax=4
zmin=0
zmax=1
# BoundaryConditionType :
# BC_UNDEFINED=0
# BC_DIRICHLET=1
# BC... | Config | null | 809 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/turbulence_mhd_mpi.ini | #
# 3D MHD turbulence example parameter file
#
[run]
tend=3.0
noutput=5
nstepmax=3
nlog=1
# define a MPI cartesian mesh with mx x my x mz MPI processes
[mpi]
mx=2
my=2
mz=1
[mesh]
nx=16
ny=16
nz=32
xmin=0
xmax=1
ymin=0
ymax=1
zmin=0
zmax=1
# BoundaryConditionType :
# BC_UNDEFINED=0
# BC_DIRICHLET=1
# BC_NEUMANN=2
... | Config | null | 1,159 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/mhd_fieldloop_2d_mpi.ini | #
# MHD 2D test parameter file; field loop simulation
#
# T. Gardiner & J.M. Stone, "An unsplit Godunov method for ideal MHD
# via constrined transport", JCP, 205, 509 (2005)
# http://www.astro.princeton.edu/~jstone/Athena/tests/field-loop/Field-loop.html
#
[run]
tend=0.5
noutput=50
nstepmax=1000
# define a 2D MPI ca... | Config | null | 1,252 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/mhd_inertialWave_2d.ini | #
# MHD 2D test parameter file; inertial wave test
#
[run]
tend=50000
noutput=20
nstepmax=1000
[mesh]
nx=32
ny=32
nz=1
# BoundaryConditionType :
# BC_UNDEFINED=0
# BC_DIRICHLET=1
# BC_NEUMANN=2
# BC_PERIODIC=3
boundary_xmin=3
boundary_xmax=3
boundary_ymin=3
boundary_ymax=3
boundary_zmin=3
boundary_zmax=3
xmin=-0.5
x... | Config | null | 922 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/Gresho_vortex2d.ini | #
# Hydro 2D example parameter file: Gresho vortex test
#
# see
# http://arxiv.org/pdf/1409.7395v1.pdf - section 4.2.3
# http://www.cfd-online.com/Wiki/Gresho_vortex
[run]
tend=0.4
noutput=100
nstepmax=1000
[mesh]
nx=256
ny=256
nz=1
xmin=0.0
xmax=1.0
ymin=0.0
ymax=1.0
zmin=0.0
zmax=1.0
# BoundaryConditionType :
# ... | Config | null | 938 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/turbulence_hydro_ou.ini | #
# 3D hydro turbulence example parameter file
#
# Forcing term generated with Ornstein-Uhlenbeck process
#
[run]
tend=1000.0
noutput=10
nstepmax=100
nlog=1000
[mesh]
nx=32
ny=32
nz=32
xmin=0
xmax=1
ymin=0
ymax=1
zmin=0
zmax=1
# BoundaryConditionType :
# BC_UNDEFINED=0
# BC_DIRICHLET=1
# BC_NEUMANN=2
# BC_PERIODIC=... | Config | null | 1,013 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/blast2d.ini | #
# Hydro 2D example parameter file: Spherical Blast wave
#
# see Athena test suite :
# http://www.astro.princeton.edu/~jstone/Athena/tests/blast/blast.html
#
[run]
tend=0.4
noutput=100
nstepmax=9000
[mesh]
nx=400
ny=600
nz=1
xmin=0.0
xmax=1.0
ymin=0.0
ymax=1.5
zmin=0.0
zmax=1.0
# BoundaryConditionType :
# BC_UND... | Config | null | 912 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/jet2d_gpu.ini | #
# Hydro 2D example parameter file; jet simulation
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc (especially when trace computations is involved).
#
# Converted from a fortran namelist containing
# various input parameters for HYDRO runs
[run]
tend=0.2
noutput=50
nst... | Config | null | 1,007 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/turbulence_hydro_mpi.ini | #
# 3D hydro turbulence example parameter file
#
[run]
tend=300.0
noutput=1
nstepmax=3
# define a MPI cartesian mesh with mx x my x mz MPI processes
[mpi]
mx=2
my=2
mz=1
[mesh]
nx=16
ny=16
nz=32
xmin=0
xmax=1
ymin=0
ymax=1
zmin=0
zmax=1
# BoundaryConditionType :
# BC_UNDEFINED=0
# BC_DIRICHLET=1
# BC_NEUMANN=2
# B... | Config | null | 1,044 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/rayleigh_taylor_cpu_2d_mhd.ini | #
# MHD 2D example parameter file; Rayleigh-Taylor simulation
#
# see Athena test suite web page :
# http://www.astro.princeton.edu/~jstone/Athena/tests/rt/rt.html
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc (especially when trace computations is involved).
#
# Conve... | Config | null | 1,340 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/jet3d_mhd_mpi_gpu.ini | #
# 3D MHD example parameter file; jet simulation
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc (especially when trace computations is involved).
#
# Converted from a fortran namelist containing
# various input parameters for HYDRO runs
[run]
tend=0.4
noutput=20
nstep... | Config | null | 1,201 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/mhd_BrioWu.ini | #
# MH 2D example parameter file; Brio-Wu shock tube test
#
# see http://www.astro.princeton.edu/~jstone/Athena/tests/brio-wu/Brio-Wu.html
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc.
#
[run]
tend=0.5
noutput=25
nstepmax=500
[mesh]
nx=256
ny=256
nz=1
# BoundaryCond... | Config | null | 952 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/testRiemannHLLD.ini | #
# MH 2D example parameter file; Brio-Wu shock tube test
#
# see http://www.astro.princeton.edu/~jstone/Athena/tests/brio-wu/Brio-Wu.html
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc.
#
[run]
tend=0.5
noutput=1
nstepmax=3
[mesh]
nx=32
ny=32
nz=12
# BoundaryConditio... | Config | null | 1,404 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/kelvin_helmholtz_gpu_2d_mhd.ini | #
# Hydro 2D example parameter file; Kelvin-Helmholtz simulation
#
# see Athena test suite web page :
# http://www.astro.princeton.edu/~jstone/Athena/tests/kh/kh.html
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc (especially when trace computations is involved).
#
# Co... | Config | null | 1,397 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/turbulence_hydro.ini | #
# 3D hydro turbulence example parameter file
#
[run]
tend=3.0
noutput=10
nstepmax=100
[mesh]
nx=32
ny=32
nz=32
xmin=0
xmax=1
ymin=0
ymax=1
zmin=0
zmax=1
# BoundaryConditionType :
# BC_UNDEFINED=0
# BC_DIRICHLET=1
# BC_NEUMANN=2
# BC_PERIODIC=3
boundary_xmin=3
boundary_xmax=3
boundary_ymin=3
boundary_ymax=3
bounda... | Config | null | 963 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | data/rayleigh_taylor_gpu_3d_mpi_mhd.ini | #
# Hydro 3D example parameter file; Rayleigh-Taylor simulation
#
# see Athena test suite web page :
# http://www.astro.princeton.edu/~jstone/Athena/tests/rt/rt.html
#
# In the GPU version, one must particularly care of numerical parameters like
# smallr, smallc (especially when trace computations is involved).
#
# Con... | Config | null | 1,367 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/makeConfigHydro.cpp | /**
* \file makeConfigHydro.cpp
* \brief a simple config builder, to be used for testing
* g++ -O3 -o makeConfigHydro makeConfigHydro.cpp
*
* \date January 2010
* \author P. Kestener
*/
#include "GetPot.h"
#include "cstdlib"
#include "iostream"
using namespace std;
int main(int argc, char **argv)
{
/* parse ... | C++ | null | 2,413 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/CMakeLists.txt | add_executable(makeConfigHydro makeConfigHydro.cpp)
target_compile_options(makeConfigHydro PRIVATE -I${CMAKE_SOURCE_DIR}/src/hydro)
configure_file(test_run.sh.in test_run.sh)
configure_file(computeL2relatif.py.in computeL2relatif.py)
if (USE_MPI)
add_subdirectory(mpiBasic)
add_subdirectory(mpiCuda)
add_subdir... | Text | null | 475 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiBasic/testMpiTopology_3D_C_API.cpp | /**
* \file testMpiTopology_3D_C_API.cpp
* \brief Simple example showing how to use MPI virtual topology (3D).
*
* adapted from See https://computing.llnl.gov/tutorials/mpi/
* see also http://scv.bu.edu/~kadin/alliance/virtual_topology/codes/
*
* \author P. Kestener
* \date 30 Sept 2010
*/
#include <mpi.h>
#i... | C++ | null | 4,716 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiBasic/testMpiTopology_2D_C_API.cpp | /**
* \file testMpiTopology_2D_C_API.cpp
* \brief Simple example showing how to use MPI virtual topology (2D).
*
* adapted from See https://computing.llnl.gov/tutorials/mpi/
* see also http://scv.bu.edu/~kadin/alliance/virtual_topology/codes/
*
* \author P. Kestener
* \date 30 Sept 2010
*/
#include <mpi.h>
#i... | C++ | null | 5,098 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiBasic/testMpiTopology_2D.cpp | /**
* \file testMpiTopology_2D.cpp
* \brief Simple example showing how to use MPI virtual topology (2D)
*
*
* Simple MPI test with a cartesian grid topology.
* In this example, a 3 by 4 grid is instantiate.
*
* !!! WARNING : C++ binding are deprecated in MPI 2.2 !!!
*
*
* IMPORTANT NOTE.
* The purpose of cl... | C++ | null | 4,863 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiBasic/testVtkXMLPImageDataWriter.cpp | /**
* \file testVtkXMLPImageDataWriter.cpp
* \brief Example of use of VTK class vtkXMLPImageDataWriter with MPI.
*
* In this example a 2D ImageData object is created and then cut into
* pieces which are written by different MPI processes into multiple
* vti files.
* argv[1] must be a filename with extension pvti... | C++ | null | 4,477 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiBasic/testMpiHelloBoost.cpp | /**
* \file testMpiHelloBoost.cpp
* \brief A simple MPI helloworld using Boost' c++ API.
* This is the non-blocking version !
*
*/
// Copyright (C) 2006 Douglas Gregor <doug.gregor@gmail.com>
// Use, modification and distribution is subject to the Boost Software
// License, Version 1.0. (See accompanying file LIC... | C++ | null | 1,201 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiBasic/testMpiHelloGlobalSession.cpp | /**
* \file testMpiHelloGlobalSession.cpp
* \brief Mpi helloworld application using CPP wrapper classes from libHydroMpi.
*
*
* To launch: mpirun -n 4 ./testMpiHelloGlobalSession
*
* Uses the MpiGlobalSession class to handle Initialize/Finalize operation.
*
* \date 1 Oct 2010
* \author Pierre Kestener
*/
#in... | C++ | null | 1,196 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiBasic/testMpiHello.cpp | /**
* \file testMpiHello.cpp
* \brief Small MPI test using c++ API.
*
* To launch: mpirun -n 4 ./testMpiHello
*
* !!! WARNING C++ binding are deprecated in MPI 2.2 !!!
*
* \ingroup test
*
* \date 27 Sept 2010
* \author Pierre Kestener
*/
// the following pragma does the same as -Wno-unused-parameter given
/... | C++ | null | 1,545 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiBasic/testMpiTopology_2D_Cpp_API.cpp | /**
* \file testMpiTopology_2D_Cpp_API.cpp
* \brief Simple example showing how to use MPI virtual topology (2D),
* CPP API.
*
* Simple MPI test with a cartesian grid topology.
* In this example, a 3 by 4 grid is instantiate.
*
* !!! WARNING : C++ binding are deprecated in MPI 2.2 !!!
*
* \date 27 sept 2010
*... | C++ | null | 4,570 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiBasic/testMpiTopology_3D_Cpp_API.cpp | /**
* \file testMpiTopology_3D_Cpp_API.cpp
* \brief Simple example showing how to use MPI virtual topology (3D),
* CPP API.
*
* Simple MPI test with a cartesian grid topology.
* In this example, a 3 by 3 by 3 grid is instantiate.
*
* !!! WARNING : C++ binding are deprecated in MPI 2.2 !!!
*
* \date 1 Oct 2010... | C++ | null | 5,002 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiBasic/CMakeLists.txt | #######################################################
add_executable(testMpiTopology_2D_C_API
testMpiTopology_2D_C_API.cpp
)
target_link_libraries (testMpiTopology_2D_C_API PUBLIC MPI::MPI_CXX)
# add_test(NAME testMpiTopology_2D_C_API COMMAND mpirun -np 12 testMpiTopology_2D_C_API)
#########################... | Text | null | 1,297 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiHydro/testCopyBorderBufferShear.cpp | /**
* \file testCopyBorderBufferShear.cpp
* \brief test routine copyBorderBufferShear
*
* \date 3 February 2012
* \author P. Kestener
*/
#include <cstdlib>
#include <iostream>
//#include <Arrays.h>
#include "hydro/shearBorderUtils.h"
using namespace hydroSimu;
/*
*
*/
int main(int argc, char * argv[]) {
... | C++ | null | 1,595 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiHydro/testMpiOutputVtk.cpp | /**
* \file testMpiOutputVtk.cpp
* \brief test routine outputVtk in class HydroRunBaseMpi.
*
* \date 16 Oct 2010
* \author Pierre Kestener
*/
#include <cstdlib>
#include <iostream>
#include "utils/mpiUtils/GlobalMpiSession.h"
#include "hydro/HydroRunBaseMpi.h"
#include "hydro/GetPot.h"
#include "utils/config/... | C++ | null | 3,781 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiHydro/testHydroMpiParameters.cpp | /**
* \file testHydroMpiParameters.cpp
* \brief test class HydroMpiParameters
*
* \date 7 Oct 2010
* \author P. Kestener
*/
#include <cstdlib>
#include <iostream>
#include "utils/mpiUtils/GlobalMpiSession.h"
#include "hydro/HydroMpiParameters.h"
#include "hydro/GetPot.h"
#include "utils/config/ConfigMap.h"
v... | C++ | null | 2,512 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiHydro/testCopyBorderBuffer.cpp | /**
* \file testCopyBorderBuffer.cpp
* \brief test routine copyBorderBuffer
*
* \date 14 Oct 2010
* \author P. Kestener
*/
#include <cstdlib>
#include <iostream>
#include "hydro/mpiBorderUtils.h"
using namespace hydroSimu;
/*
*
*/
int main(int argc, char * argv[]) {
int isize = 8, jsize = 16;
HostArra... | C++ | null | 1,464 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiHydro/testHydroRunBaseMpi_border.cpp | /**
* \file testHydroRunBaseMpi-border.cpp
* \brief test routine make_boundaries in class HydroRunBaseMpi.
*
* \date 18 Oct 2010
* \author Pierre Kestener
*/
#include <cstdlib>
#include <iostream>
#include "utils/mpiUtils/GlobalMpiSession.h"
#include "hydro/HydroRunBaseMpi.h"
#include "hydro/GetPot.h"
#includ... | C++ | null | 3,790 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiHydro/CMakeLists.txt | ############################################################
add_executable(testCopyBorderBuffer "")
target_sources(testCopyBorderBuffer
PUBLIC
testCopyBorderBuffer.cpp)
target_include_directories(testCopyBorderBuffer
PUBLIC
${CMAKE_SOURCE_DIR}/src)
target_link_libraries(testCopyBorderBuffer
PUBLIC
RamsesGP... | Text | null | 2,240 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiHydro/testMpiBuffer.cpp | /**
* \file testMpiBuffer.cpp
* \brief test transfert buffers (HostArray class) between 2 MPI processes.
*
* Note for debug: see http://www.open-mpi.org/faq/?category=debugging
* 1. mpirun -np 2 xterm -e gdb ./testMpiBuffer
* 2. mpirun -np 2 valgrind ./testMpiBuffer
* mpirun -np 2 ./testMpiBuffer
* \date 15... | C++ | null | 3,976 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiIO/dumpMpiInfo.c | /* -*- Mode: C; c-basic-offset:4 ; -*- */
/*
* (C) 2001 by Argonne National Laboratory.
* See COPYRIGHT in top-level directory.
*/
/* Change for BG/L made by Hao Yu, yuh@us.ibm.com
*/
/* copied from MPICH2 sources: $MPICH2_SRC/src/mpi/romio/test/file_info.c
slightly modified to dump ROMIO values */
/... | C | null | 12,376 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiIO/submit_job_curie.sh | #!/bin/bash
#MSUB -r dumpMpiInfo
#MSUB -n 8
#MSUB -T 600
#MSUB -q test
#MSUB -o dumpMpiInfo_%I.o
#MSUB -e dumpMpiInfo_%I.e
#MSUB -A paxxxx # change here to the right project Id
##MSUB -@ pierre.kestener@cea.fr:end
set -x
cd ${BRIDGE_MSUB_PWD}
ccc_mprun ./dumpMpiInfo -fname test.txt
| Shell | null | 309 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/testPoisson/testPoissonCpuFFTW3d.cpp | /**
* A very simple test for solving Laplacian(\phi) = rho using FFT in 3D.
*
* Laplacian operator can be considered as a low-pass filter.
* Here we implement 2 types of filters :
*
* method 0 : see Numerical recipes in C, section 19.4
* method 1 : just divide right hand side by -(kx^2+ky^2+kz^2) in Fourier
*
... | C++ | null | 12,290 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/testPoisson/poisson_fft_2d.py | """
Mini benchmark for FFT-based Poisson solver.
"""
import numpy as np
import matplotlib.pyplot as plt
from scipy.fftpack import fftn
#from pyfftw.interfaces.numpy_fft import fftn
def initData(data,testCase):
x0, y0 = 0.5, 0.5
# get data dimensions
Nx,Ny=data.shape
Lx,Ly=1.0,1.0
... | Python | null | 4,493 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/testPoisson/testPoissonCpuFFTW2d.cpp | /**
* A very simple test for solving Laplacian(\phi) = rho using FFT in 2D.
*
* Laplacian operator can be considered as a low-pass filter.
* Here we implement 2 types of filters :
*
* method 0 : see Numerical recipes in C, section 19.4
* method 1 : just divide right hand side by -(kx^2+ky^2) in Fourier
*
* Tes... | C++ | null | 10,553 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/testPoisson/poisson_fft_3d.py | """
Mini testbench for FFT-based Poisson solver.
P. Kestener, June 6 2015.
"""
import numpy as np
import matplotlib.pyplot as plt
from scipy.fftpack import fftn
#from pyfftw.interfaces.numpy_fft import fftn
def initData(data,testCase):
x0, y0, z0 = 0.5, 0.5, 0.5
# get data dimensions
Nx,Ny,... | Python | null | 5,797 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/testPoisson/CMakeLists.txt | #######################################
add_executable(testPoissonCpuFFTW2d "")
target_sources(testPoissonCpuFFTW2d
PUBLIC
testPoissonCpuFFTW2d.cpp)
target_include_directories(testPoissonCpuFFTW2d
PUBLIC
${CMAKE_SOURCE_DIR}/src/hydro)
target_link_libraries(testPoissonCpuFFTW2d
PUBLIC
RamsesGPU::cnpy
Rams... | Text | null | 1,648 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | test/mpiCuda/CMakeLists.txt | if(USE_CUDA)
#############################################################
add_executable(testHelloMpiCuda "")
target_sources(testHelloMpiCuda
PRIVATE
testHelloMpiCuda.cu)
target_link_libraries(testHelloMpiCuda PUBLIC RamsesGPU::mpiUtils)
# convert flags to something nvcc can process
#cmake_cud... | Text | null | 1,400 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/euler2d_laxliu.cpp | /**
* \file euler2d_laxliu.cpp
* \brief
* Solve 2D Euler equation on a cartesian grid using positive scheme (Lax-Liu).
*
* \date 21/01/2010
* \author P. Kestener
*
* $Id: euler2d_laxliu.cpp 3452 2014-06-17 10:09:48Z pkestene $
*/
#include <cstdlib>
#include <iostream>
#include "HydroRunLaxLiu.h"
#include "u... | C++ | null | 3,143 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/euler_zslab_mpi_main.cpp | /**
* \file euler_zslab_mpi_main.cpp
* \brief
* Solve 3D Euler equation on a cartesian grid using the Godunov
* method (with Riemann solvers) using MPI+CUDA and z-slab update method..
*
* \date September 27, 2012
* \author P. Kestener
*
* $Id: euler_zslab_mpi_main.cpp 3234 2014-02-03 16:40:34Z pkestene $
*/
... | C++ | null | 5,353 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/euler_zslab_main.cpp | /**
* \file euler_zslab_main.cpp
* \brief
*
* Solve 3D Euler equations on a cartesian grid using
* the Godunov scheme (with Riemann solvers) and z-slab update method.
*
* \date Sept 12, 2012
* \author P. Kestener
*
* $Id: euler_zslab_main.cpp 3452 2014-06-17 10:09:48Z pkestene $
*/
#ifndef _GNU_SOURCE
#def... | C++ | null | 5,490 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/euler_main.cpp | /**
* \file euler_main.cpp
* \brief
*
* Solve 2D/3D Euler equations on a cartesian grid using either :
* - the Godunov scheme (with Riemann solvers)
* - the Kurganov-Tadmor scheme
* - the Relaxing TVD scheme
*
* Also solve 2D/3D MHD equations Godunov+CTU scheme.
*
* \date 16/01/2010
* \author P. Kestener
... | C++ | null | 6,862 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/euler2d_main_glut.cpp | /**
* \file euler2d_main_glut.cpp
* \brief
* GLUT-based GUI which displays in real time simulations results of 2D Euler / MHD
* solved on a cartesian grid using either :
* - the Godunov scheme (with Riemann solvers)
* - the Kurganov-Tadmor scheme
* - the Relaxing TVD scheme
*
* \date 23/02/2010
* \author P.... | C++ | null | 12,439 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/test_euler2d_glut.sh | #!/bin/bash
./euler2d_cpu_glut --posx 200 --posy 100&
./euler2d_gpu_glut --posx 420 --posy 100&
# NOTE1 : to make a screencast of test, before running this screen, first launch
# recordmydesktop -x 200 -y 100 --width 430 --height 840 -o euler_cpu_gpu_screencast.ogv
# NOTE2 : to re-encode ogv video into avi:
# menco... | Shell | null | 408 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/euler_mpi_main.cpp | /**
* \file euler_mpi_main.cpp
* \brief
* Solve 2D/3D Euler equation on a cartesian grid using the Godunov
* method (with Riemann solvers) using MPI+CUDA.
*
* \date 19 Oct 2010
* \author P. Kestener
*
* $Id: euler_mpi_main.cpp 3452 2014-06-17 10:09:48Z pkestene $
*/
#include <cstdlib>
#include <iostream>
/... | C++ | null | 5,424 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/CMakeLists.txt | add_subdirectory(utils)
add_subdirectory(analysis)
add_subdirectory(hydro)
#
# MAIN application
#
# set exe name
if(USE_MPI)
if (USE_CUDA)
set(RamsesGPU_main_exe ramsesGPU_mpi_cuda)
else(USE_CUDA)
set(RamsesGPU_main_exe ramsesGPU_mpi_cpu)
endif(USE_CUDA)
else(USE_MPI)
if (USE_CUDA)
set(RamsesGPU_m... | Text | null | 2,797 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/testTrace.cpp | /**
* \file testTrace.cpp
* \brief numerical test of reconstruction step
*
* $Id$
*/
#include <cstdlib>
#include <iostream>
#include <iomanip>
//#define USE_DOUBLE
#include "./hydro/real_type.h"
#include "./hydro/trace_mhd.h"
/** Parse command line / configuration parameter file */
#include "hydro/GetPot.h"
#i... | C++ | null | 4,511 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/test_euler2d_qt.sh | #!/bin/bash
./euler2d_cpu_qt --posx 200 --posy 100&
./euler2d_gpu_qt --posx 460 --posy 100&
# NOTE1 : to make a screencast of test, before running this screen, first launch
# recordmydesktop -x 200 -y 100 --width 430 --height 840 -o euler_cpu_gpu_screencast.ogv
# NOTE2 : to re-encode ogv video into avi:
# mencoder ... | Shell | null | 404 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/testRiemannHLLD.cpp | /**
* \file testRiemannHLLD.cpp
* \brief numerical test of HLLD solver
*
* $Id: testRiemannHLLD.cpp 3452 2014-06-17 10:09:48Z pkestene $
*/
#include <cstdlib>
#include <iostream>
#include <iomanip>
//#define USE_DOUBLE
#include "./hydro/real_type.h"
#include "./hydro/riemann.h"
#include "./hydro/riemann_mhd.h"
... | C++ | null | 5,463 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/CMakeLists.txt | add_subdirectory(powerSpectrum)
if (USE_MPI AND USE_PNETCDF)
add_subdirectory(readSlice)
endif()
if (USE_MPI AND USE_PNETCDF AND NOT CUDA)
add_subdirectory(structureFunctions)
endif()
| Text | null | 190 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/powerSpectrum/fBm.ini | [mesh]
# local domain sizes
nx=32
ny=32
nz=32
ghostWidth=3
[mpi]
mx=1
my=1
mz=1
[output]
pnetcdf_cdf5=no
pnetcdf_verbose=no
outputFile=./fBm.nc
ghostIncluded=yes
scaled=no
vectorFieldEnabled=yes
[fBm]
random_seed=1234
h=0.5
| Config | null | 227 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/powerSpectrum/pnetcdf_io.h | /**
* \file pnetcdf_io.h
*
* Parallel NetCDF IO.
*
* \author P. Kestener
* \date 20/06/2013
*
* $Id: pnetcdf_io.h 3369 2014-04-14 15:52:22Z pkestene $
*/
#ifndef PNETCDF_IO_H_
#define PNETCDF_IO_H_
#include "utils/config/ConfigMap.h"
#include "hydro/Arrays.h"
using hydroSimu::HostArray;
/**
* Read netcdf f... | C/C++ Header | null | 1,123 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/powerSpectrum/pnetcdf_io.cpp | #include <stdlib.h>
#include <mpi.h>
#include "pnetcdf_io.h"
#include "hydro/constants.h"
// for Parallel-netCDF support
#ifdef USE_PNETCDF
#include <pnetcdf.h>
#define PNETCDF_HANDLE_ERROR { \
if (err != NC_NOERR) \
printf("Error at line %d (%s)\n", _... | C++ | null | 9,850 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/powerSpectrum/CMakeLists.txt | configure_file(fft.ini fft.ini)
configure_file(fBm.ini fBm.ini)
if (USE_MPI)
#
# Compute Power Spectrum Mpi
#
# only add this test if fftw3_mpi library is available
if (FFTW_MPI_LIB AND USE_PNETCDF)
add_executable(computePowerSpectrumMpi "")
target_sources(computePowerSpectrumMpi
PUBLIC
... | Text | null | 2,130 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/powerSpectrum/powerSpectrumMpi.cpp | /**
* \file powerSpectrumMpi.cpp
*
* This file contains a simple programs to compute power spectrum of a large data
* array stored in a netcdf file (use Parallel-NetCDF to load data) and then compute
* FFT (using the distributed implementation provided by fftw3-mpi).
*
* \author P. Kestener
* \date 20/06/2013
... | C++ | null | 12,820 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/powerSpectrum/fft_mpi.cpp | /**
* \file fft_mpi.cpp
*
* Parallel FFT computation.
*
* \author P. Kestener
* \date 20/06/2013
*
* $Id: fft_mpi.cpp 3394 2014-05-06 10:19:58Z pkestene $
*/
#include <mpi.h>
#include "fft_mpi.h"
#include <iostream>
#include <math.h>
#include <stdlib.h>
/*****************************************************... | C++ | null | 14,083 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/powerSpectrum/projectedDensityMpi.cpp | /**
* \file projectedDensityMpi.cpp
*
* This file contains a simple programs to compute 2D projected density of a large
* 3D data array stored in a netcdf file (use Parallel-NetCDF to load data).
* Projection along Z into (X,Y) plane.
* PNetCDF reading routine removes ghost zones; so we read only the inner sub-do... | C++ | null | 5,220 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/powerSpectrum/generate_fBm.cpp | /**
* \file generateFbm.cpp
*
* This file contains a simple programs to generate a realization the
* 3D fractional Brownian process
* http://en.wikipedia.org/wiki/Fractional_Brownian_motion
*
* Data are then dump into a pnetcdf file comptatible with RamsesGPU.
* Only rho_vx is populated with the Brownian motion... | C++ | null | 6,657 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/powerSpectrum/fft_mpi.h | /**
* \file fft_mpi.h
*
* Parallel FFT computation.
*
* \author P. Kestener
* \date 20/06/2013
*
* $Id: fft_mpi.h 3394 2014-05-06 10:19:58Z pkestene $
*/
#ifndef FFT_MPI_H_
#define FFT_MPI_H_
#ifdef USE_FFTW3_MPI
#include <fftw3-mpi.h>
#endif /* USE_FFTW3_MPI */
#include "utils/config/ConfigMap.h"
#ifdef ... | C/C++ Header | null | 1,666 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/powerSpectrum/fft.ini | [mesh]
nx=64
ny=64
nz=16
ghostWidth=3
[mpi]
mx=1
my=1
mz=4
[powerSpectrum]
nBins=64
dumpFreq=yes
| Config | null | 99 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/readSlice/CMakeLists.txt | #
# read slice of pnetcdf data file
#
add_executable(readSlice "")
target_sources(readSlice
PUBLIC
readSlice.cpp)
target_compile_options(readSlice
PUBLIC
-DUSE_FFTW3_MPI -DUSE_PNETCDF)
target_include_directories(readSlice
PUBLIC
${PNETCDF_INCLUDE_DIRS}
${CMAKE_SOURCE_DIR}/src)
target_link_libraries(readS... | Text | null | 416 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/readSlice/readSlice.cpp | /**
* \file readSlice.cpp
* \brief
* MPI app (Parallel-NetCDF) to read a slice in a large 3D netcdf file.
*
* example of use:
* mpirun -np 1 readSlice_double -i test.nc -o test.npy -x --slice 12
*
* \date 2 July 2013
* \author P. Kestener
*
* $Id: readSlice.cpp 2957 2013-08-26 15:08:40Z pkestene $
*/
#in... | C++ | null | 12,658 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/structureFunctions/generate_fractional_browian_field.py | #!/usr/bin/env python
"""
Generate (fractional) Brownian field and save it in a Netcdf file.
"""
# numerical packages
import numpy as np
# Fast Fourier Transform
from scipy.fftpack import fft, ifft, fftn, ifftn
#
# Create 2D Brownian field (assume nx and ny are even)
#
# h : Holder exponent in [0, 1]
# if h == 0.5... | Python | null | 8,905 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/structureFunctions/common_sf.h | #ifndef COMMON_SF_H_
#define COMMON_SF_H_
enum SF_TYPES {
SF_TYPE_V = 0, /* v */
SF_TYPE_RHO2V = 1, /* rho^1/2*v */
SF_TYPE_RHO3V = 2 /* rho^1/3*v */
};
//! number of SF type (velocity, rho^1/2*v, rho^1/3*v)
//extern const int NumberOfTypes;
//! number of SF order (q=1,2, ..., MaxSFOrder), initial... | C/C++ Header | null | 591 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/structureFunctions/structureFunctionsMpi_v2.cpp | /**
* \file structureFunctionsMPI.cpp
*
* A simple standalone program to structure functions ( longitudinal and transversal)
* of a large data from turbulence simulation run. Data are stored in a netcdf file
* (use Parallel-NetCDF to load data).
* There are 2 possibilities:
* - use a 2D (X,Y) domain decompositio... | C++ | null | 30,109 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/structureFunctions/common_sf.cpp | #include "common_sf.h"
//const int NumberOfTypes = 3;
int MaxSFOrder = 0; // will be initialized by reading param file
| C++ | null | 121 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/structureFunctions/strucFunc.ini | [mesh]
# local domain sizes
nx=16
ny=16
nz=16
ghostWidth=3
# if pieceByPieceAlongZ=yes, we use a 2D domain decomposition
# else a 3D domain decomposition
pieceByPieceAlongZ=yes
[mpi]
mx=4
my=4
mz=4
[structureFunctions]
# number of reference point over the global domain
#nSampleTotal=65536 # 2**16
nSampleTotal=4096 # ... | Config | null | 401 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/structureFunctions/test_pnetcdf.ini | [mesh]
# local domain sizes
nx=32
ny=64
nz=16
ghostWidth=3
[mpi]
mx=2
my=1
mz=4
[output]
pnetcdf_cdf5=no
pnetcdf_verbose=no
outputFile=./testData.nc
| Config | null | 151 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/structureFunctions/structureFunctionsMpi.cpp | /**
* \file structureFunctionsMPI.cpp
*
* A simple standalone program to structure functions ( longitudinal and transversal)
* of a large data from turbulence simulation run. Data are stored in a netcdf file
* (use Parallel-NetCDF to load data).
* There are 2 possibilities:
* - use a 2D (X,Y) domain decompositio... | C++ | null | 46,282 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/structureFunctions/pnetcdf_io.cpp | /**
* \file pnetcdf_io.cpp
*
* Parallel NetCDF IO.
*
* \author P. Kestener
* \date 20/06/2013
*
* $Id: pnetcdf_io.cpp 3404 2014-05-22 10:43:59Z pkestene $
*/
#include <stdlib.h>
#include <mpi.h>
#include "pnetcdf_io.h"
#include "hydro/constants.h"
#include "common_sf.h" // for enum DataIndex
// for Paralle... | C++ | null | 7,922 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/structureFunctions/pnetcdf_io.h | /**
* \file pnetcdf_io.h
*
* Parallel NetCDF IO.
*
* \author P. Kestener
* \date 20/06/2013
*
* $Id: pnetcdf_io.h 3404 2014-05-22 10:43:59Z pkestene $
*/
#ifndef PNETCDF_IO_H_
#define PNETCDF_IO_H_
#include <mpi.h>
#include "utils/config/ConfigMap.h"
#include "hydro/Arrays.h"
using hydroSimu::HostArray;
/*... | C/C++ Header | null | 1,667 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/structureFunctions/CMakeLists.txt | configure_file(test_pnetcdf.ini test_pnetcdf.ini)
configure_file(strucFunc.ini strucFunc.ini)
add_executable(test_pnetcdf_write "")
target_sources(test_pnetcdf_write
PUBLIC
pnetcdf_io.cpp
test_pnetcdf_write.cpp)
target_compile_options(test_pnetcdf_write
PUBLIC
-DUSE_PNETCDF)
target_link_libraries(test_pnetcd... | Text | null | 1,480 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/structureFunctions/structureFunctionsMpi_v3.cpp | /**
* \file structureFunctionsMPI.cpp
*
* A simple standalone program to structure functions ( longitudinal and transversal)
* of a large data from turbulence simulation run. Data are stored in a netcdf file
* (use Parallel-NetCDF to load data).
* There are 2 possibilities:
* - use a 2D (X,Y) domain decompositio... | C++ | null | 30,075 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/analysis/structureFunctions/test_pnetcdf_write.cpp | /**
* \file test_write_pnetcdf.cpp
*
* \author P. Kestener
* \date April, 14 2014
*
* $Id: test_pnetcdf_write.cpp 3404 2014-05-22 10:43:59Z pkestene $
*/
#include <math.h>
#include <iostream>
#include <fstream>
#include <limits> // numeric limits
#include "hydro/GetPot.h"
#include "utils/config/ConfigMap.h... | C++ | null | 5,878 |
[ascl:1710.013] | https://github.com/pkestene/ramsesGPU | src/hydro/Arrays.h | /**
* \file Arrays.h
* \brief Provides CPU/GPU C++ array classes.
*
* \author F. Chateau and P. Kestener
*
* $Id: Arrays.h 3444 2014-06-15 20:30:40Z pkestene $
*/
#ifndef ARRAYS_H_
#define ARRAYS_H_
#include <stdexcept>
#include <iostream>
#include <cstring>
// the following defines types for cuda compatibilit... | C/C++ Header | null | 24,412 |
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