pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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identity
basepair
bp
non-bs
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1
1
1
2zjq
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C
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null
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null
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identity
basepair
bp
non-bs
2zjq_X_68_X_72_C_A
AC
2ZJQ_X_68_X_72_C_A
2zjq
C
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1yi2
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identity
basepair
bp
non-bs
1yi2_0_518_0_1338_G_U
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null
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1
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identity
basestacks
non-bp
bs
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1YI2_0_1966_0_1967_U_U
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U
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1
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1
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1
1
1
1
1
1yi2
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identity
basepair
bp
non-bs
1yi2_0_2782_0_2791_G_U
GU
1YI2_0_2782_0_2791_G_U
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1
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null
0
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0
1
1
2zjq
X
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null
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identity
basestacks
non-bp
bs
2zjq_X_463_X_465_C_C
CC
2ZJQ_X_463_X_465_C_C
2zjq
C
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1
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1
92.544261
1
1
1
1
1
2zjq
X
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1,614
null
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null
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identity
basestacks
non-bp
bs
2zjq_X_1614_X_1615_C_C
CC
2ZJQ_X_1614_X_1615_C_C
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0
1
1
1
2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_1237_X_1238_G_A
AG
2ZJQ_X_1237_X_1238_G_A
2zjq
G
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1
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3
121.062546
1
1
1
1
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6gqb
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null
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null
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identity
non-interacting
non-bp
non-bs
6gqb_1_6_1_11_A_A
AA
6GQB_1_6_1_11_A_A
6gqb
A
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0
null
0
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0
1
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5mga
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A
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null
B
C
19
null
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identity
non-interacting
non-bp
non-bs
5mga_B_15_B_19_A_C
AC
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5mga
A
C
1
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null
0
0
0
1
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4lf5
A
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identity
basestacks
non-bp
bs
4lf5_A_222_A_223_U_U
UU
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4lf5
U
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1
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1
118.482467
1
1
1
1
1
4ujc
A2
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203
null
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230
null
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identity
basepair
bp
non-bs
4ujc_A2_203_A2_230_U_U
UU
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4ujc
U
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1
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null
0
0
0
1
1
2zjq
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null
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null
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identity
basepair
bp
non-bs
2zjq_X_747_X_1651_A_U
AU
2ZJQ_X_747_X_1651_A_U
2zjq
A
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1
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null
0
0
0
1
1
1yi2
0
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null
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null
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identity
basepair
bp
non-bs
1yi2_0_950_0_1017_G_U
GU
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G
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1
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3
114.050539
2
1
1
1
1
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294
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304
null
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identity
basestacks
non-bp
bs
4lf5_A_294_A_304_U_U
UU
4LF5_A_294_A_304_U_U
4lf5
U
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1
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null
0
0
0
1
1
3j9w
BA
A
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null
BA
A
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null
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identity
basestacks
non-bp
bs
3j9w_BA_1005_BA_1006_A_A
AA
3J9W_BA_1005_BA_1006_A_A
3j9w
A
A
1
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2
98.270016
2
1
1
1
1
1nlc
A
C
17
null
B
C
15
null
21.9757
identity
non-interacting
non-bp
non-bs
1nlc_A_17_B_15_C_C
CC
1NLC_A_17_B_15_C_C
1nlc
C
C
1
32.108665
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0
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0
null
0
0
0
1
1
1yi2
0
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820
null
0
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1,831
null
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identity
basestacks
non-bp
bs
1yi2_0_820_0_1831_G_U
GU
1YI2_0_820_0_1831_G_U
1yi2
G
U
1
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0
null
0
0
0
1
1
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14
null
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null
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identity
non-interacting
non-bp
non-bs
6ff7_2_14_6_48_C_A
AC
6FF7_2_14_6_48_C_A
6ff7
C
A
1
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0
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null
0
0
0
1
1
2zjq
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null
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928
null
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identity
basepair
bp
non-bs
2zjq_X_875_X_928_G_G
GG
2ZJQ_X_875_X_928_G_G
2zjq
G
G
1
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2
107.99828
1
1
1
1
1
1yi2
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0
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null
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identity
basepair
bp
non-bs
1yi2_0_2693_0_2701_U_G
GU
1YI2_0_2693_0_2701_U_G
1yi2
U
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1
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null
0
0
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1
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6ywy
A
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3,447
null
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identity
non-interacting
non-bp
non-bs
6ywy_A_14_A_3447_A_A
AA
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6ywy
A
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1
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null
0
0
0
1
1
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A
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8
null
B
C
27
null
11.1355
identity
non-interacting
non-bp
non-bs
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CC
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C
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1
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null
0
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1
1
6zxf
2
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4
null
2
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604
null
14.5488
identity
non-interacting
non-bp
non-bs
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AC
6ZXF_2_4_2_604_C_A
6zxf
C
A
1
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0
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0
null
0
0
0
1
1
4ujc
A2
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121
null
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146
null
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identity
basepair
bp
non-bs
4ujc_A2_121_A2_146_A_A
AA
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4ujc
A
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1
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0
null
0
0
0
1
1
1yi2
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null
0
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216
null
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identity
basestacks
non-bp
bs
1yi2_0_215_0_216_A_A
AA
1YI2_0_215_0_216_A_A
1yi2
A
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1
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0
null
0
0
0
1
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3j9w
BA
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null
BA
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null
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identity
basepair
bp
non-bs
3j9w_BA_1021_BA_1035_A_G
AG
3J9W_BA_1021_BA_1035_A_G
3j9w
A
G
1
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2.50846
0
46.875859
2.661188
2
132.202319
2
1
1
1
1
1b7f
Q
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7
null
Q
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12
null
14.3423
identity
non-interacting
non-bp
non-bs
1b7f_Q_7_Q_12_U_U
UU
1B7F_Q_7_Q_12_U_U
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U
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1
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null
0
0
0
1
1
2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_2512_X_2513_A_A
AA
2ZJQ_X_2512_X_2513_A_A
2zjq
A
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1
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0
null
0
0
0
1
1
3j9w
AA
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922
null
AA
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null
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identity
basestacks
non-bp
bs
3j9w_AA_922_AA_923_C_A
AC
3J9W_AA_922_AA_923_C_A
3j9w
C
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1
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21.206517
3.806379
0
null
0
0
0
1
1
3j9w
AA
G
221
null
AA
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222
null
3.1812
identity
basestacks
non-bp
bs
3j9w_AA_221_AA_222_G_G
GG
3J9W_AA_221_AA_222_G_G
3j9w
G
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1
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0
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1
105.635611
1
1
1
1
1
3j9w
BA
A
1,235
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1,265
null
4.5755
identity
basepair
bp
non-bs
3j9w_BA_1235_BA_1265_A_A
AA
3J9W_BA_1235_BA_1265_A_A
3j9w
A
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1
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0
49.634484
7.159574
0
null
0
0
0
1
1
6pig
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17
null
1
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21
null
22.3543
identity
non-interacting
non-bp
non-bs
6pig_1_17_1_21_C_U
CU
6PIG_1_17_1_21_C_U
6pig
C
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1
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0
30.217366
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0
null
0
0
0
1
1
2zjq
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547
null
X
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565
null
2.7902
identity
basepair
bp
non-bs
2zjq_X_547_X_565_U_A
AU
2ZJQ_X_547_X_565_U_A
2zjq
U
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1
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0
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2
114.000999
2
1
1
1
1
1yi2
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null
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131
null
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identity
basestacks
non-bp
bs
1yi2_0_115_0_131_U_A
AU
1YI2_0_115_0_131_U_A
1yi2
U
A
1
3.886
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3.886
3.664249
0
null
0
0
0
1
1
1yi2
0
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1,140
null
0
G
1,224
null
3.181
identity
basestacks
non-bp
bs
1yi2_0_1140_0_1224_C_G
CG
1YI2_0_1140_0_1224_C_G
1yi2
C
G
1
9.062648
7.259275
3.05631
0
9.062648
3.361252
3
109.940112
1
1
1
1
1
2zjq
X
G
1,245
null
X
G
1,246
null
2.9765
identity
basestacks
non-bp
bs
2zjq_X_1245_X_1246_G_G
GG
2ZJQ_X_1245_X_1246_G_G
2zjq
G
G
1
12.409589
5.574497
2.917143
0.610845
12.409589
3.291631
1
89.895935
0
0
1
1
1
1yi2
0
A
602
null
0
A
603
null
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identity
basestacks
non-bp
bs
1yi2_0_602_0_603_A_A
AA
1YI2_0_602_0_603_A_A
1yi2
A
A
1
44.4235
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3.08535
0
44.4235
3.841617
0
null
0
0
0
1
1
6h0r
A
C
8
null
A
G
11
null
9.2724
identity
non-interacting
non-bp
non-bs
6h0r_A_8_A_11_C_G
CG
6H0R_A_8_A_11_C_G
6h0r
C
G
1
34.231272
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8.853027
0
34.231272
9.272433
0
null
0
0
0
1
1
3j9w
AA
U
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null
AA
G
648
null
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identity
basestacks
non-bp
bs
3j9w_AA_609_AA_648_U_G
GU
3J9W_AA_609_AA_648_U_G
3j9w
U
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1
4.385005
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3.089936
0
4.385005
3.237724
1
78.458835
0
0
1
1
1
3j9w
AA
G
414
null
AA
U
445
null
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identity
basestacks
non-bp
bs
3j9w_AA_414_AA_445_G_U
GU
3J9W_AA_414_AA_445_G_U
3j9w
G
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1
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0
11.012137
3.024427
1
92.029122
1
1
1
1
1
1yi2
0
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null
0
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2,791
null
2.7447
identity
basepair
bp
non-bs
1yi2_0_2781_0_2791_U_U
UU
1YI2_0_2781_0_2791_U_U
1yi2
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1
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0
10.250214
2.744719
1
109.509502
1
1
1
1
1
1yi2
0
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null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_1344_0_1345_G_A
AG
1YI2_0_1344_0_1345_G_A
1yi2
G
A
1
0.942419
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0.942419
3.343856
1
94.582032
1
1
1
1
1
1b7f
P
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8
null
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12
null
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identity
non-interacting
non-bp
non-bs
1b7f_P_8_P_12_U_U
UU
1B7F_P_8_P_12_U_U
1b7f
U
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1
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0
64.520942
8.845184
0
null
0
0
0
1
1
1yi2
0
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420
null
0
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1,920
null
3.9946
identity
basestacks
non-bp
bs
1yi2_0_420_0_1920_U_C
CU
1YI2_0_420_0_1920_U_C
1yi2
U
C
1
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21.008254
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null
0
0
0
1
1
3j9w
AA
A
959
null
AA
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1,241
null
2.8361
identity
basepair
bp
non-bs
3j9w_AA_959_AA_1241_A_U
AU
3J9W_AA_959_AA_1241_A_U
3j9w
A
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1
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0.275908
0
8.803582
2.836068
2
118.68129
2
1
1
1
1
2zjq
X
A
542
null
X
A
2,003
null
2.3556
identity
basepair
bp
non-bs
2zjq_X_542_X_2003_A_A
AA
2ZJQ_X_542_X_2003_A_A
2zjq
A
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1
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79.231591
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173.091941
1
1
1
1
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identity
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bs
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identity
basepair
bp
non-bs
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identity
basestacks
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bs
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
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identity
basepair
bp
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non-interacting
non-bp
non-bs
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identity
basepair
bp
non-bs
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identity
basepair
bp
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1
1
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identity
basestacks
non-bp
bs
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GU
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identity
basestacks
non-bp
bs
1yi2_0_1113_0_1114_G_A
AG
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0
1
1
1
2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_45_X_157_C_G
CG
2ZJQ_X_45_X_157_C_G
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C
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1
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1
1
1
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identity
basepair
bp
non-bs
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identity
basestacks
non-bp
bs
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CC
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C
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identity
basepair
bp
non-bs
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identity
non-interacting
non-bp
non-bs
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AA
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3j9w
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identity
basestacks
non-bp
bs
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AA
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1
1
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null
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identity
basepair
bp
non-bs
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CU
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U
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133.47525
1
1
1
1
1
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_239_X_240_A_U
AU
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2zjq
A
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null
0
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0
1
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null
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identity
non-interacting
non-bp
non-bs
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AC
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identity
basestacks
non-bp
bs
3j9w_AA_664_AA_763_A_C
AC
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3j9w
A
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1
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1
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identity
basestacks
non-bp
bs
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AU
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1
1
1
1
1
1yi2
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null
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null
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identity
basestacks
non-bp
bs
1yi2_0_1565_0_1566_C_C
CC
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C
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1
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null
0
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0
1
1
4oq9
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null
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identity
basestacks
non-bp
bs
4oq9_h_186_h_187_U_U
UU
4OQ9_H_186_H_187_U_U
4oq9
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1
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null
0
0
0
1
1
1yi2
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null
0
C
179
null
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identity
basestacks
non-bp
bs
1yi2_0_158_0_179_A_C
AC
1YI2_0_158_0_179_A_C
1yi2
A
C
1
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null
0
0
0
1
1
2zjq
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null
X
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null
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identity
basepair
bp
non-bs
2zjq_X_1771_X_1773_A_C
AC
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2zjq
A
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1
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null
0
0
0
1
1
1yi2
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null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_904_0_1355_U_A
AU
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1yi2
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A
1
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null
0
0
0
1
1
3j9w
AA
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null
AA
A
173
null
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identity
basepair
bp
non-bs
3j9w_AA_147_AA_173_G_A
AG
3J9W_AA_147_AA_173_G_A
3j9w
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1
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116.635195
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1
1
1
1
3j9w
AA
A
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312
null
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identity
basepair
bp
non-bs
3j9w_AA_301_AA_312_A_U
AU
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3j9w
A
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1
1
1
1
1yi2
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identity
basestacks
non-bp
bs
1yi2_0_711_0_712_G_C
CG
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1
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3
105.621454
1
1
1
1
1
3b5a
B
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null
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identity
basepair
bp
non-bs
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AC
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0
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1yi2
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identity
basestacks
non-bp
bs
1yi2_0_774_0_775_C_G
CG
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0
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identity
basestacks
non-bp
bs
1yi2_0_492_0_501_C_G
CG
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1
1
1
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identity
basepair
bp
non-bs
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GU
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1
1
1
1
1yi2
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identity
basepair
bp
non-bs
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AC
1YI2_0_1384_0_1399_C_A
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null
0
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0
1
1
3b5a
A
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null
B
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12
null
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identity
basestacks
non-bp
bs
3b5a_A_4_B_12_C_G
CG
3B5A_A_4_B_12_C_G
3b5a
C
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1
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null
0
0
0
1
1
2zjq
X
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null
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null
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identity
non-interacting
non-bp
non-bs
2zjq_X_5_X_2613_A_A
AA
2ZJQ_X_5_X_2613_A_A
2zjq
A
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1
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null
0
0
0
1
1
3b5a
B
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null
C
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35
null
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identity
basestacks
non-bp
bs
3b5a_B_28_C_35_A_G
AG
3B5A_B_28_C_35_A_G
3b5a
A
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1
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84.334202
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0
1
1
1
2zjq
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null
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identity
basepair
bp
non-bs
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null
0
0
0
1
1
1yi2
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null
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null
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identity
basepair
bp
non-bs
1yi2_0_658_0_747_C_G
CG
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1
1
1
1
1yi2
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identity
basestacks
non-bp
bs
1yi2_0_2091_0_2092_G_G
GG
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0
1
1
1
3j9w
AA
C
622
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AA
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637
null
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identity
basestacks
non-bp
bs
3j9w_AA_622_AA_637_C_G
CG
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C
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82.296399
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0
1
1
1
3j9w
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null
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null
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identity
basestacks
non-bp
bs
3j9w_AA_537_AA_538_C_G
CG
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3j9w
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null
0
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0
1
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D
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D
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null
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identity
basestacks
non-bp
bs
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AC
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null
0
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0
1
1
3j9w
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null
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identity
basestacks
non-bp
bs
3j9w_AA_957_AA_1244_G_U
GU
3J9W_AA_957_AA_1244_G_U
3j9w
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83.14082
0
0
1
1
1
6gqb
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null
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null
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identity
non-interacting
non-bp
non-bs
6gqb_1_4_1_2574_U_G
GU
6GQB_1_4_1_2574_U_G
6gqb
U
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1
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null
0
0
0
1
1
1yi2
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0
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1,358
null
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identity
basepair
bp
non-bs
1yi2_0_901_0_1358_G_A
AG
1YI2_0_901_0_1358_G_A
1yi2
G
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1
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1
143.354015
1
1
1
1
1
4tzz
B
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null
B
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15
null
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identity
non-interacting
non-bp
non-bs
4tzz_B_6_B_15_A_G
AG
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4tzz
A
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0
0
0
1
1
2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_1775_X_1776_A_A
AA
2ZJQ_X_1775_X_1776_A_A
2zjq
A
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1
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null
0
0
0
1
1
3j9w
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A
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AA
A
151
null
3.1304
identity
basestacks
non-bp
bs
3j9w_AA_150_AA_151_A_A
AA
3J9W_AA_150_AA_151_A_A
3j9w
A
A
1
6.955098
4.890014
3.403378
1.070894
6.955098
3.130359
2
131.036529
2
1
1
1
1
1yi2
0
A
1,188
null
0
C
1,209
null
3.3442
identity
basepair
bp
non-bs
1yi2_0_1188_0_1209_A_C
AC
1YI2_0_1188_0_1209_A_C
1yi2
A
C
1
43.196887
5.76923
2.024466
0
43.196887
6.426325
0
null
0
0
0
1
1
3j9w
AX
A
14
null
AX
A
21
null
3.4758
identity
basepair
bp
non-bs
3j9w_AX_14_AX_21_A_A
AA
3J9W_AX_14_AX_21_A_A
3j9w
A
A
1
13.121401
10.177443
0.290304
0
13.121401
3.475791
1
133.603721
1
1
1
1
1
1yi2
0
U
1,770
null
0
C
1,772
null
3.2565
identity
basestacks
non-bp
bs
1yi2_0_1770_0_1772_U_C
CU
1YI2_0_1770_0_1772_U_C
1yi2
U
C
1
25.543146
6.958829
3.418317
0
25.543146
3.256493
1
90.329126
1
1
1
1
1