pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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basestacks
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basestacks
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basestacks
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bs
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identity
basepair
bp
non-bs
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identity
basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
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identity
basepair
bp
non-bs
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identity
basestacks
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bs
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identity
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identity
basestacks
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identity
basepair
bp
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identity
non-interacting
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non-bs
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identity
basepair
bp
non-bs
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identity
basestacks
non-bp
bs
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1
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identity
basepair
bp
non-bs
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identity
non-interacting
non-bp
non-bs
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AA
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identity
basestacks
non-bp
bs
2zjq_X_1720_X_1721_G_G
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1
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1yi2
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identity
basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
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bs
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identity
basestacks
non-bp
bs
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identity
basepair
bp
non-bs
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1
1
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identity
basepair
bp
non-bs
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1
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identity
basestacks
non-bp
bs
1yi2_0_719_0_720_C_G
CG
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1
1
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identity
basepair
bp
non-bs
2zjq_X_610_X_670_G_U
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130.660698
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1
1
1
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2zjq
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identity
basestacks
non-bp
bs
2zjq_X_1604_X_1605_A_A
AA
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1
111.505685
1
1
1
1
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null
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identity
non-interacting
non-bp
non-bs
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AG
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identity
basestacks
non-bp
bs
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identity
basepair
bp
non-bs
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1
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identity
basestacks
non-bp
bs
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1yi2
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identity
basestacks
non-bp
bs
1yi2_0_1896_0_1897_G_U
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118.822786
1
1
1
1
1
1yi2
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identity
basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
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1
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null
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identity
non-interacting
non-bp
non-bs
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1
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identity
non-interacting
non-bp
non-bs
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identity
basepair
bp
non-bs
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0
null
0
0
0
1
1
1yi2
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null
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identity
basepair
bp
non-bs
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CG
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C
G
1
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1
111.486176
1
1
1
1
1
5zej
A
C
9
null
B
C
30
null
20.2052
identity
non-interacting
non-bp
non-bs
5zej_A_9_B_30_C_C
CC
5ZEJ_A_9_B_30_C_C
5zej
C
C
1
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null
0
0
0
1
1
4ujc
A2
C
2,278
null
A2
C
2,311
null
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identity
basepair
bp
non-bs
4ujc_A2_2278_A2_2311_C_C
CC
4UJC_A2_2278_A2_2311_C_C
4ujc
C
C
1
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0
null
0
0
0
1
1
1yi2
0
G
17
null
0
U
527
null
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identity
basestacks
non-bp
bs
1yi2_0_17_0_527_G_U
GU
1YI2_0_17_0_527_G_U
1yi2
G
U
1
6.113199
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0
6.113199
3.394231
1
77.383
0
0
1
1
1
2zjq
X
U
770
null
X
C
771
null
3.435
identity
basestacks
non-bp
bs
2zjq_X_770_X_771_U_C
CU
2ZJQ_X_770_X_771_U_C
2zjq
U
C
1
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1
93.799137
1
1
1
1
1
2fmt
C
G
12
null
C
C
16
null
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identity
non-interacting
non-bp
non-bs
2fmt_C_12_C_16_G_C
CG
2FMT_C_12_C_16_G_C
2fmt
G
C
1
30.473973
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null
0
0
0
1
1
2zjq
X
A
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null
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1,122
null
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identity
basepair
bp
non-bs
2zjq_X_1059_X_1122_A_A
AA
2ZJQ_X_1059_X_1122_A_A
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A
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1
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0
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3.094744
2
119.985999
1
1
1
1
1
4lf5
A
C
322
null
A
C
328
null
3.5448
identity
basepair
bp
non-bs
4lf5_A_322_A_328_C_C
CC
4LF5_A_322_A_328_C_C
4lf5
C
C
1
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48.652599
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0
null
0
0
0
1
1
5no4
A
U
5
null
A
G
27
null
23.2867
identity
non-interacting
non-bp
non-bs
5no4_A_5_A_27_U_G
GU
5NO4_A_5_A_27_U_G
5no4
U
G
1
30.426506
23.414307
9.334294
0
30.426506
24.949432
0
null
0
0
0
1
1
1yi2
0
G
32
null
0
C
451
null
2.744
identity
basepair
bp
non-bs
1yi2_0_32_0_451_G_C
CG
1YI2_0_32_0_451_G_C
1yi2
G
C
1
7.853132
10.612365
0.064322
0
7.853132
2.744037
3
121.721656
3
1
1
1
1
2zjq
X
A
2,718
null
X
C
2,747
null
3.8901
identity
basestacks
non-bp
bs
2zjq_X_2718_X_2747_A_C
AC
2ZJQ_X_2718_X_2747_A_C
2zjq
A
C
1
12.794855
8.290807
3.472255
0
12.794855
4.459402
0
null
0
0
0
1
1
1yi2
0
G
2,092
null
0
G
2,093
null
2.7014
identity
basepair
bp
non-bs
1yi2_0_2092_0_2093_G_G
GG
1YI2_0_2092_0_2093_G_G
1yi2
G
G
1
10.887728
7.48896
0.586964
0
10.887728
2.701449
1
148.267228
1
1
1
1
1
3j9w
AA
U
953
null
AA
G
954
null
3.074
identity
basestacks
non-bp
bs
3j9w_AA_953_AA_954_U_G
GU
3J9W_AA_953_AA_954_U_G
3j9w
U
G
1
20.62115
5.453731
3.273437
1.200073
20.62115
3.528679
0
null
0
0
0
1
1
3j9w
BA
G
262
null
BA
A
667
null
3.1625
identity
basepair
bp
non-bs
3j9w_BA_262_BA_667_G_A
AG
3J9W_BA_262_BA_667_G_A
3j9w
G
A
1
36.022913
5.416848
0.843236
0
36.022913
3.162453
1
148.600763
1
1
1
1
1
4v50
BB
C
2,681
null
BB
C
2,683
null
2.7218
identity
basepair
bp
non-bs
4v50_BB_2681_BB_2683_C_C
CC
4V50_BB_2681_BB_2683_C_C
4v50
C
C
1
37.082204
8.661058
1.593403
0
37.082204
2.721776
1
124.125971
1
1
1
1
1
3j9w
AA
G
165
null
AA
G
166
null
3.2903
identity
basestacks
non-bp
bs
3j9w_AA_165_AA_166_G_G
GG
3J9W_AA_165_AA_166_G_G
3j9w
G
G
1
3.781459
5.546585
3.220748
0.006563
3.781459
3.50057
0
null
0
0
0
1
1
1yi2
0
C
2,717
null
0
C
2,718
null
3.1269
identity
basestacks
non-bp
bs
1yi2_0_2717_0_2718_C_C
CC
1YI2_0_2717_0_2718_C_C
1yi2
C
C
1
23.674523
6.019755
3.410271
0
23.674523
3.42375
1
79.163953
0
0
1
1
1
1yi2
0
G
2,543
null
0
U
2,589
null
8.1923
identity
basepair
bp
non-bs
1yi2_0_2543_0_2589_G_U
GU
1YI2_0_2543_0_2589_G_U
1yi2
G
U
1
37.032072
5.884785
1.558349
0
37.032072
10.872236
0
null
0
0
0
1
1
3j9w
BA
C
914
null
BA
C
959
null
2.8806
identity
basepair
bp
non-bs
3j9w_BA_914_BA_959_C_C
CC
3J9W_BA_914_BA_959_C_C
3j9w
C
C
1
68.441463
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0.631887
0
68.441463
2.880633
1
160.412829
1
1
1
1
1
1yi2
0
G
13
null
0
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543
null
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identity
non-interacting
non-bp
non-bs
1yi2_0_13_0_543_G_G
GG
1YI2_0_13_0_543_G_G
1yi2
G
G
1
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0
86.548495
18.676031
0
null
0
0
0
1
1
5mga
B
A
13
null
B
A
15
null
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identity
non-interacting
non-bp
non-bs
5mga_B_13_B_15_A_A
AA
5MGA_B_13_B_15_A_A
5mga
A
A
1
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0
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0
null
0
0
0
1
1
1yi2
0
U
10
null
0
U
533
null
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identity
non-interacting
non-bp
non-bs
1yi2_0_10_0_533_U_U
UU
1YI2_0_10_0_533_U_U
1yi2
U
U
1
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15.886745
6.574713
0
40.851465
13.296036
0
null
0
0
0
1
1
5t62
A
U
9
null
C
U
153
null
10.3198
identity
non-interacting
non-bp
non-bs
5t62_A_9_C_153_U_U
UU
5T62_A_9_C_153_U_U
5t62
U
U
1
8.873732
10.279399
10.472147
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8.873732
10.716551
0
null
0
0
0
1
1
1yi2
0
G
159
null
0
U
176
null
3.2803
identity
basepair
bp
non-bs
1yi2_0_159_0_176_G_U
GU
1YI2_0_159_0_176_G_U
1yi2
G
U
1
10.152639
10.110851
3.307407
0
10.152639
3.891557
0
null
0
0
0
1
1
4lel
QA
G
7
null
QA
G
558
null
12.5867
identity
non-interacting
non-bp
non-bs
4lel_QA_7_QA_558_G_G
GG
4LEL_QA_7_QA_558_G_G
4lel
G
G
1
48.50528
11.510325
3.242185
0
48.50528
13.786773
0
null
0
0
0
1
1
2zjq
X
A
979
null
X
G
980
null
3.1858
identity
basestacks
non-bp
bs
2zjq_X_979_X_980_A_G
AG
2ZJQ_X_979_X_980_A_G
2zjq
A
G
1
8.338073
5.389525
3.465854
0.825157
8.338073
3.185794
1
98.850714
1
1
1
1
1
3j9w
AA
G
1,057
null
AA
U
1,220
null
4.0465
identity
basestacks
non-bp
bs
3j9w_AA_1057_AA_1220_G_U
GU
3J9W_AA_1057_AA_1220_G_U
3j9w
G
U
1
8.719998
8.92332
3.768445
0
8.719998
4.046534
0
null
0
0
0
1
1
1yi2
0
A
857
null
0
U
1,846
null
4.533
identity
basepair
bp
non-bs
1yi2_0_857_0_1846_A_U
AU
1YI2_0_857_0_1846_A_U
1yi2
A
U
1
24.426745
8.986472
3.1351
0
24.426745
4.744017
0
null
0
0
0
1
1
3j9w
BA
A
1,286
null
BA
A
1,287
null
2.9407
identity
basestacks
non-bp
bs
3j9w_BA_1286_BA_1287_A_A
AA
3J9W_BA_1286_BA_1287_A_A
3j9w
A
A
1
10.009999
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3.26996
1.68898
10.009999
3.905828
0
null
0
0
0
1
1
1yi2
0
U
2,129
null
0
C
2,130
null
3.3355
identity
basestacks
non-bp
bs
1yi2_0_2129_0_2130_U_C
CU
1YI2_0_2129_0_2130_U_C
1yi2
U
C
1
11.990823
5.754033
3.382899
0
11.990823
3.33554
1
117.572924
1
1
1
1
1
2zjq
X
C
422
null
X
C
432
null
4.27
identity
basepair
bp
non-bs
2zjq_X_422_X_432_C_C
CC
2ZJQ_X_422_X_432_C_C
2zjq
C
C
1
20.743236
8.247907
3.580981
0
20.743236
4.269982
0
null
0
0
0
1
1
2zjq
X
C
85
null
X
C
96
null
2.9712
identity
basepair
bp
non-bs
2zjq_X_85_X_96_C_C
CC
2ZJQ_X_85_X_96_C_C
2zjq
C
C
1
14.954541
7.457732
2.674614
0
14.954541
4.298335
0
null
0
0
0
1
1
3j9w
AA
C
1,457
null
AA
C
1,458
null
3.0393
identity
basestacks
non-bp
bs
3j9w_AA_1457_AA_1458_C_C
CC
3J9W_AA_1457_AA_1458_C_C
3j9w
C
C
1
15.290201
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3.466333
0.293357
15.290201
3.666249
0
null
0
0
0
1
1
2zjq
X
C
1,673
null
X
C
1,674
null
2.8243
identity
basestacks
non-bp
bs
2zjq_X_1673_X_1674_C_C
CC
2ZJQ_X_1673_X_1674_C_C
2zjq
C
C
1
19.697105
6.078505
2.297544
0
19.697105
3.499207
1
75.905338
0
0
1
1
1
3j9w
AA
A
1,065
null
AA
U
1,066
null
3.2039
identity
basestacks
non-bp
bs
3j9w_AA_1065_AA_1066_A_U
AU
3J9W_AA_1065_AA_1066_A_U
3j9w
A
U
1
20.311846
5.584546
3.763179
1.139374
20.311846
3.649172
0
null
0
0
0
1
1
3b5a
A
A
10
null
A
G
13
null
8.9183
identity
non-interacting
non-bp
non-bs
3b5a_A_10_A_13_A_G
AG
3B5A_A_10_A_13_A_G
3b5a
A
G
1
25.397217
14.942177
8.932338
0
25.397217
8.918296
0
null
0
0
0
1
1
1yi2
0
G
1,370
null
0
U
1,371
null
2.9004
identity
basepair
bp
non-bs
1yi2_0_1370_0_1371_G_U
GU
1YI2_0_1370_0_1371_G_U
1yi2
G
U
1
12.108657
6.644498
0.739073
0
12.108657
2.900371
1
122.107961
1
1
1
1
1
3j9w
AA
A
1,348
null
AA
A
1,349
null
3.4366
identity
basestacks
non-bp
bs
3j9w_AA_1348_AA_1349_A_A
AA
3J9W_AA_1348_AA_1349_A_A
3j9w
A
A
1
9.063126
5.015504
3.413021
0.267579
9.063126
3.716572
0
null
0
0
0
1
1
2zjq
X
U
2,059
null
X
G
2,217
null
6.5081
identity
basepair
bp
non-bs
2zjq_X_2059_X_2217_U_G
GU
2ZJQ_X_2059_X_2217_U_G
2zjq
U
G
1
51.34876
11.589733
2.871776
0
51.34876
8.871563
0
null
0
0
0
1
1
5ew4
B
C
2
null
B
C
10
null
21.4678
identity
non-interacting
non-bp
non-bs
5ew4_B_2_B_10_C_C
CC
5EW4_B_2_B_10_C_C
5ew4
C
C
1
17.29301
24.639747
16.304857
0
17.29301
23.049493
0
null
0
0
0
1
1
4v50
BB
U
1,173
null
BB
U
1,176
null
2.5301
identity
basepair
bp
non-bs
4v50_BB_1173_BB_1176_U_U
UU
4V50_BB_1173_BB_1176_U_U
4v50
U
U
1
42.833731
7.557991
1.432635
0
42.833731
2.530144
1
122.55144
1
1
1
1
1
1akx
A
G
28
null
A
G
32
null
19.7633
identity
non-interacting
non-bp
non-bs
1akx_A_28_A_32_G_G
GG
1AKX_A_28_A_32_G_G
1akx
G
G
1
70.611277
20.87978
11.240113
0
70.611277
21.182405
0
null
0
0
0
1
1
1yi2
0
A
67
null
0
A
69
null
3.3006
identity
basestacks
non-bp
bs
1yi2_0_67_0_69_A_A
AA
1YI2_0_67_0_69_A_A
1yi2
A
A
1
17.904417
7.015771
3.472136
0
17.904417
3.848971
0
null
0
0
0
1
1
2zjq
X
A
305
null
X
G
355
null
4.2898
identity
basepair
bp
non-bs
2zjq_X_305_X_355_A_G
AG
2ZJQ_X_305_X_355_A_G
2zjq
A
G
1
23.617959
10.154686
0.328901
0
23.617959
4.289847
0
null
0
0
0
1
1
1yi2
0
C
250
null
0
C
260
null
3.2973
identity
basestacks
non-bp
bs
1yi2_0_250_0_260_C_C
CC
1YI2_0_250_0_260_C_C
1yi2
C
C
1
4.888385
7.470372
2.85115
0
4.888385
4.534704
0
null
0
0
0
1
1
2zjq
Y
C
67
null
Y
C
111
null
2.9713
identity
basestacks
non-bp
bs
2zjq_Y_67_Y_111_C_C
CC
2ZJQ_Y_67_Y_111_C_C
2zjq
C
C
1
20.798724
8.554545
3.20847
0.159519
20.798724
3.599785
0
null
0
0
0
1
1
3j9w
AA
G
11
null
AA
A
569
null
10.9582
identity
non-interacting
non-bp
non-bs
3j9w_AA_11_AA_569_G_A
AG
3J9W_AA_11_AA_569_G_A
3j9w
G
A
1
60.257257
14.46319
5.502233
0
60.257257
13.2594
0
null
0
0
0
1
1
2fmt
C
G
7
null
C
C
69
null
8.9596
identity
non-interacting
non-bp
non-bs
2fmt_C_7_C_69_G_C
CG
2FMT_C_7_C_69_G_C
2fmt
G
C
1
15.037007
10.626947
9.488617
1.33501
15.037007
8.959634
0
null
0
0
0
1
1
4lel
QA
A
10
null
QA
C
555
null
16.8112
identity
non-interacting
non-bp
non-bs
4lel_QA_10_QA_555_A_C
AC
4LEL_QA_10_QA_555_A_C
4lel
A
C
1
38.343316
23.038859
15.925764
0
38.343316
16.811209
0
null
0
0
0
1
1
6ywy
A
A
23
null
A
U
3,348
null
17.2187
identity
non-interacting
non-bp
non-bs
6ywy_A_23_A_3348_A_U
AU
6YWY_A_23_A_3348_A_U
6ywy
A
U
1
56.46373
20.261328
7.891356
0
56.46373
17.659916
0
null
0
0
0
1
1
4ujc
A2
G
4,298
null
A2
G
4,333
null
3.4981
identity
basepair
bp
non-bs
4ujc_A2_4298_A2_4333_G_G
GG
4UJC_A2_4298_A2_4333_G_G
4ujc
G
G
1
49.12297
10.648298
3.470665
0
49.12297
5.822685
0
null
0
0
0
1
1
1yi2
0
A
1,406
null
0
C
1,699
null
5.5778
identity
basestacks
non-bp
bs
1yi2_0_1406_0_1699_A_C
AC
1YI2_0_1406_0_1699_A_C
1yi2
A
C
1
57.468968
11.486173
6.05775
0
57.468968
6.140292
0
null
0
0
0
1
1
3j9w
AA
C
20
null
AA
C
21
null
3.1189
identity
basestacks
non-bp
bs
3j9w_AA_20_AA_21_C_C
CC
3J9W_AA_20_AA_21_C_C
3j9w
C
C
1
16.204861
5.572793
3.693951
0.595778
16.204861
3.98668
0
null
0
0
0
1
1