pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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bs
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identity
basestacks
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bs
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basestacks
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bs
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3J9W_AA_1265_AA_1287_C_C
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basestacks
non-bp
bs
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identity
basepair
bp
non-bs
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basestacks
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bs
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basestacks
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bs
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identity
basestacks
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bs
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basestacks
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basestacks
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bs
3j9w_AA_1535_AA_1536_G_G
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identity
basepair
bp
non-bs
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identity
basepair
bp
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1
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identity
basestacks
non-bp
bs
2zjq_X_2401_X_2403_A_C
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identity
basepair
bp
non-bs
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identity
basepair
bp
non-bs
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identity
basestacks
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bs
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identity
basestacks
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bs
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1
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basepair
bp
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identity
basestacks
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bs
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identity
basestacks
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bs
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identity
non-interacting
non-bp
non-bs
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AG
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identity
basepair
bp
non-bs
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AU
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1
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1
1
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identity
basestacks
non-bp
bs
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1
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1
1
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null
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identity
basestacks
non-bp
bs
2zjq_X_1655_X_1656_C_U
CU
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identity
basestacks
non-bp
bs
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identity
basepair
bp
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identity
basestacks
non-bp
bs
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identity
non-interacting
non-bp
non-bs
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null
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identity
basepair
bp
non-bs
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identity
non-interacting
non-bp
non-bs
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identity
basepair
bp
non-bs
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0
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identity
basestacks
non-bp
bs
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identity
basepair
bp
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identity
basestacks
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bs
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identity
basestacks
non-bp
bs
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1yi2
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identity
basepair
bp
non-bs
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identity
basestacks
non-bp
bs
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1
1
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null
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identity
basestacks
non-bp
bs
2zjq_X_2599_X_2600_U_A
AU
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1
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identity
basestacks
non-bp
bs
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AC
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identity
basestacks
non-bp
bs
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1
1
1
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identity
basestacks
non-bp
bs
3j9w_AA_680_AA_745_G_U
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1
1
1
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identity
basepair
bp
non-bs
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AC
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null
0
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1
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identity
basepair
bp
non-bs
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1
1
1
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identity
basestacks
non-bp
bs
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101.213956
1
1
1
1
1
3j9w
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null
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identity
basestacks
non-bp
bs
3j9w_AA_80_AA_81_G_A
AG
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1
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3j9w
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A
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identity
basestacks
non-bp
bs
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identity
basepair
bp
non-bs
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0
8.978545
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0
null
0
0
0
1
1
1yi2
0
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1,594
null
0
G
1,601
null
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identity
basestacks
non-bp
bs
1yi2_0_1594_0_1601_C_G
CG
1YI2_0_1594_0_1601_C_G
1yi2
C
G
1
8.332397
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0
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3.189389
3
80.030657
0
0
1
1
1
6ozp
c
C
9
null
C
C
16
null
19.6193
identity
non-interacting
non-bp
non-bs
6ozp_c_9_C_16_C_C
CC
6OZP_C_9_C_16_C_C
6ozp
C
C
1
52.794184
22.57192
11.728966
0
52.794184
20.192164
0
null
0
0
0
1
1
6ywy
A
A
14
null
A
C
20
null
22.3564
identity
non-interacting
non-bp
non-bs
6ywy_A_14_A_20_A_C
AC
6YWY_A_14_A_20_A_C
6ywy
A
C
1
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0
83.705217
22.35642
0
null
0
0
0
1
1
3j9w
AA
A
53
null
AA
C
322
null
2.9653
identity
basepair
bp
non-bs
3j9w_AA_53_AA_322_A_C
AC
3J9W_AA_53_AA_322_A_C
3j9w
A
C
1
29.34295
8.462538
2.422575
0
29.34295
2.965308
1
115.962903
1
1
1
1
1
6t2c
V
G
12
null
V
C
22
null
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identity
non-interacting
non-bp
non-bs
6t2c_V_12_V_22_G_C
CG
6T2C_V_12_V_22_G_C
6t2c
G
C
1
23.741826
15.60304
5.091599
0
23.741826
6.401008
0
null
0
0
0
1
1
3b5a
B
A
23
null
C
U
42
null
3.05
identity
basepair
bp
non-bs
3b5a_B_23_C_42_A_U
AU
3B5A_B_23_C_42_A_U
3b5a
A
U
1
78.296069
9.775754
2.88105
0
78.296069
3.049959
2
115.977649
2
1
1
1
1
2zjq
X
U
1,710
null
X
C
1,711
null
6.4518
identity
basepair
bp
non-bs
2zjq_X_1710_X_1711_U_C
CU
2ZJQ_X_1710_X_1711_U_C
2zjq
U
C
1
65.249465
7.894572
4.441625
0
65.249465
10.233065
0
null
0
0
0
1
1
1yi2
0
C
890
null
0
G
891
null
3.2539
identity
basestacks
non-bp
bs
1yi2_0_890_0_891_C_G
CG
1YI2_0_890_0_891_C_G
1yi2
C
G
1
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3.231523
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3.656367
0
null
0
0
0
1
1
6dmv
B
A
1
null
B
U
4
null
9.4597
identity
non-interacting
non-bp
non-bs
6dmv_B_1_B_4_A_U
AU
6DMV_B_1_B_4_A_U
6dmv
A
U
1
19.841382
14.071309
9.817858
0
19.841382
9.459732
0
null
0
0
0
1
1
6nmd
G
A
10
null
G
A
21
null
8.1297
identity
non-interacting
non-bp
non-bs
6nmd_G_10_G_21_A_A
AA
6NMD_G_10_G_21_A_A
6nmd
A
A
1
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11.869997
9.107114
0.521249
45.032231
8.129686
0
null
0
0
0
1
1
3j9w
AA
A
189
null
AA
A
190
null
3.2311
identity
basestacks
non-bp
bs
3j9w_AA_189_AA_190_A_A
AA
3J9W_AA_189_AA_190_A_A
3j9w
A
A
1
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3.838702
0
null
0
0
0
1
1
1yi2
0
A
1,107
null
0
C
1,256
null
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identity
basepair
bp
non-bs
1yi2_0_1107_0_1256_A_C
AC
1YI2_0_1107_0_1256_A_C
1yi2
A
C
1
12.989603
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2.336626
0
12.989603
8.401311
0
null
0
0
0
1
1
3j9w
BA
U
383
null
BA
A
384
null
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identity
basestacks
non-bp
bs
3j9w_BA_383_BA_384_U_A
AU
3J9W_BA_383_BA_384_U_A
3j9w
U
A
1
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0
30.231446
4.667789
0
null
0
0
0
1
1
4x62
A
G
6
null
A
G
9
null
18.1964
identity
non-interacting
non-bp
non-bs
4x62_A_6_A_9_G_G
GG
4X62_A_6_A_9_G_G
4x62
G
G
1
16.797315
17.660437
14.454916
0
16.797315
19.472605
0
null
0
0
0
1
1
1z7f
B
A
11
null
B
U
12
null
3.117
identity
basestacks
non-bp
bs
1z7f_B_11_B_12_A_U
AU
1Z7F_B_11_B_12_A_U
1z7f
A
U
1
13.610529
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3.329558
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13.610529
3.116957
2
100.032613
1
1
1
1
1
6x7f
7
G
-18
null
D
A
969
null
23.0473
identity
non-interacting
non-bp
non-bs
6x7f_7_-18_D_969_G_A
AG
6X7F_7_-18_D_969_G_A
6x7f
G
A
1
89.261809
31.004229
7.834595
0
89.261809
23.047266
0
null
0
0
0
1
1
2zjq
X
A
1,171
null
X
U
1,172
null
3.0096
identity
basestacks
non-bp
bs
2zjq_X_1171_X_1172_A_U
AU
2ZJQ_X_1171_X_1172_A_U
2zjq
A
U
1
24.640901
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3.398515
1.585835
24.640901
3.009645
1
83.327983
0
0
1
1
1
6wua
a
C
952
null
a
C
1,393
null
6.7025
identity
non-interacting
non-bp
non-bs
6wua_a_952_a_1393_C_C
CC
6WUA_A_952_A_1393_C_C
6wua
C
C
1
14.92344
14.745676
3.17945
0
14.92344
6.702482
0
null
0
0
0
1
1
3j9w
BA
C
1,032
null
BA
C
1,033
null
3.0773
identity
basestacks
non-bp
bs
3j9w_BA_1032_BA_1033_C_C
CC
3J9W_BA_1032_BA_1033_C_C
3j9w
C
C
1
15.357572
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3.514085
0.50811
15.357572
4.050909
0
null
0
0
0
1
1
5ibb
13
U
2
null
13
A
611
null
7.6645
identity
non-interacting
non-bp
non-bs
5ibb_13_2_13_611_U_A
AU
5IBB_13_2_13_611_U_A
5ibb
U
A
1
74.439546
11.489115
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74.439546
10.277536
0
null
0
0
0
1
1
2zjq
X
U
534
null
X
U
535
null
3.1224
identity
basestacks
non-bp
bs
2zjq_X_534_X_535_U_U
UU
2ZJQ_X_534_X_535_U_U
2zjq
U
U
1
24.187268
5.661337
3.893206
1.594281
24.187268
3.633859
0
null
0
0
0
1
1
1nlc
A
A
16
null
B
C
15
null
18.6199
identity
non-interacting
non-bp
non-bs
1nlc_A_16_B_15_A_C
AC
1NLC_A_16_B_15_A_C
1nlc
A
C
1
25.003744
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18.726651
0
25.003744
19.046221
0
null
0
0
0
1
1
2zjq
X
G
1,186
null
X
A
1,187
null
2.7726
identity
basepair
bp
non-bs
2zjq_X_1186_X_1187_G_A
AG
2ZJQ_X_1186_X_1187_G_A
2zjq
G
A
1
8.785713
5.383056
1.581194
0
8.785713
3.530632
0
null
0
0
0
1
1
4lf5
A
U
1,070
null
A
U
1,085
null
3.0907
identity
basestacks
non-bp
bs
4lf5_A_1070_A_1085_U_U
UU
4LF5_A_1070_A_1085_U_U
4lf5
U
U
1
27.388028
10.063307
2.614402
0
27.388028
4.227776
0
null
0
0
0
1
1
1yi2
0
A
407
null
0
A
429
null
3.2175
identity
basepair
bp
non-bs
1yi2_0_407_0_429_A_A
AA
1YI2_0_407_0_429_A_A
1yi2
A
A
1
53.041954
14.0713
0.712902
0
53.041954
3.217551
1
134.428253
1
1
1
1
1
2zjq
X
U
2,064
null
X
G
2,218
null
2.6096
identity
basepair
bp
non-bs
2zjq_X_2064_X_2218_U_G
GU
2ZJQ_X_2064_X_2218_U_G
2zjq
U
G
1
17.338325
10.113166
0.934988
0
17.338325
2.609609
3
113.377679
2
1
1
1
1
6icz
B
C
13
null
B
C
56
null
21.8617
identity
non-interacting
non-bp
non-bs
6icz_B_13_B_56_C_C
CC
6ICZ_B_13_B_56_C_C
6icz
C
C
1
34.545176
22.30885
20.14128
0
34.545176
23.629093
0
null
0
0
0
1
1
6ywy
A
C
20
null
A
U
3,451
null
21.6953
identity
non-interacting
non-bp
non-bs
6ywy_A_20_A_3451_C_U
CU
6YWY_A_20_A_3451_C_U
6ywy
C
U
1
71.233564
22.283655
18.146487
0
71.233564
22.346156
0
null
0
0
0
1
1
1yi2
0
C
937
null
0
C
1,033
null
2.9878
identity
basepair
bp
non-bs
1yi2_0_937_0_1033_C_C
CC
1YI2_0_937_0_1033_C_C
1yi2
C
C
1
1.450168
10.689771
0.154433
0
1.450168
2.987788
2
164.290021
2
1
1
1
1
3j9w
BA
A
1,709
null
BA
U
2,755
null
3.0415
identity
basestacks
non-bp
bs
3j9w_BA_1709_BA_2755_A_U
AU
3J9W_BA_1709_BA_2755_A_U
3j9w
A
U
1
13.590904
6.509198
3.304045
2.06064
13.590904
3.561443
0
null
0
0
0
1
1
2zjq
X
A
720
null
X
C
737
null
2.4234
identity
basepair
bp
non-bs
2zjq_X_720_X_737_A_C
AC
2ZJQ_X_720_X_737_A_C
2zjq
A
C
1
32.286416
10.424357
0.467567
0
32.286416
2.42339
1
135.383821
1
1
1
1
1
4v7s
CA
C
1,209
null
CA
C
1,214
null
3.7085
identity
basepair
bp
non-bs
4v7s_CA_1209_CA_1214_C_C
CC
4V7S_CA_1209_CA_1214_C_C
4v7s
C
C
1
21.45988
9.419623
1.133572
0
21.45988
3.708471
0
null
0
0
0
1
1
6pig
1
G
18
null
1
U
22
null
21.5292
identity
non-interacting
non-bp
non-bs
6pig_1_18_1_22_G_U
GU
6PIG_1_18_1_22_G_U
6pig
G
U
1
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22.038504
1.897582
32.327204
21.52922
0
null
0
0
0
1
1
6dti
A
G
6
null
A
G
298
null
19.7305
identity
non-interacting
non-bp
non-bs
6dti_A_6_A_298_G_G
GG
6DTI_A_6_A_298_G_G
6dti
G
G
1
73.452005
19.556183
11.583462
0
73.452005
20.705977
0
null
0
0
0
1
1
1yi2
0
C
2,114
null
0
A
2,633
null
5.0385
identity
basepair
bp
non-bs
1yi2_0_2114_0_2633_C_A
AC
1YI2_0_2114_0_2633_C_A
1yi2
C
A
1
1.625259
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1.815525
0
1.625259
8.413472
0
null
0
0
0
1
1
1yi2
0
G
1,849
null
0
A
2,011
null
3.4632
identity
basestacks
non-bp
bs
1yi2_0_1849_0_2011_G_A
AG
1YI2_0_1849_0_2011_G_A
1yi2
G
A
1
23.69094
7.668225
2.789899
0
23.69094
3.974801
0
null
0
0
0
1
1
2zjq
X
C
1,745
null
X
A
1,746
null
2.4818
identity
basestacks
non-bp
bs
2zjq_X_1745_X_1746_C_A
AC
2ZJQ_X_1745_X_1746_C_A
2zjq
C
A
1
26.953844
4.815627
2.999637
0.996216
26.953844
3.376159
1
103.614697
1
1
1
1
1
3j9w
AA
C
394
null
AA
U
395
null
2.8684
identity
basestacks
non-bp
bs
3j9w_AA_394_AA_395_C_U
CU
3J9W_AA_394_AA_395_C_U
3j9w
C
U
1
14.182221
5.45764
3.324256
0.337607
14.182221
2.868403
1
93.942076
1
1
1
1
1
2zjq
X
A
668
null
X
G
669
null
4.4055
identity
basestacks
non-bp
bs
2zjq_X_668_X_669_A_G
AG
2ZJQ_X_668_X_669_A_G
2zjq
A
G
1
44.161895
4.80325
5.43578
2.526067
44.161895
5.755573
0
null
0
0
0
1
1
420d
A
A
9
null
A
A
11
null
6.3956
identity
non-interacting
non-bp
non-bs
420d_A_9_A_11_A_A
AA
420D_A_9_A_11_A_A
420d
A
A
1
13.933393
10.263327
6.819693
0
13.933393
7.034542
0
null
0
0
0
1
1
2zjq
X
G
2,610
null
X
G
2,865
null
9.1258
identity
basepair
bp
non-bs
2zjq_X_2610_X_2865_G_G
GG
2ZJQ_X_2610_X_2865_G_G
2zjq
G
G
1
30.50521
7.153672
2.823882
0
30.50521
9.528923
0
null
0
0
0
1
1
1yi2
0
G
275
null
0
C
276
null
3.2629
identity
basestacks
non-bp
bs
1yi2_0_275_0_276_G_C
CG
1YI2_0_275_0_276_G_C
1yi2
G
C
1
10.779674
5.469292
3.461444
2.576869
10.779674
3.387464
1
101.605938
1
1
1
1
1
2zjq
X
G
2,624
null
X
G
2,712
null
8.5075
identity
basepair
bp
non-bs
2zjq_X_2624_X_2712_G_G
GG
2ZJQ_X_2624_X_2712_G_G
2zjq
G
G
1
35.026004
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1.639637
0
35.026004
9.788986
0
null
0
0
0
1
1
1yi2
0
U
2,484
null
0
C
2,536
null
4.11
identity
basepair
bp
non-bs
1yi2_0_2484_0_2536_U_C
CU
1YI2_0_2484_0_2536_U_C
1yi2
U
C
1
57.319837
10.349597
4.343678
0
57.319837
4.110005
0
null
0
0
0
1
1
2zjq
X
A
638
null
X
G
639
null
3.9436
identity
basepair
bp
non-bs
2zjq_X_638_X_639_A_G
AG
2ZJQ_X_638_X_639_A_G
2zjq
A
G
1
81.733796
4.044337
4.578462
0
81.733796
5.199335
0
null
0
0
0
1
1
2zjq
X
A
911
null
X
A
912
null
3.3719
identity
basestacks
non-bp
bs
2zjq_X_911_X_912_A_A
AA
2ZJQ_X_911_X_912_A_A
2zjq
A
A
1
8.831723
6.114508
3.703997
1.015077
8.831723
3.979386
0
null
0
0
0
1
1
3j9w
BA
U
2,521
null
BA
U
2,522
null
3.1041
identity
basestacks
non-bp
bs
3j9w_BA_2521_BA_2522_U_U
UU
3J9W_BA_2521_BA_2522_U_U
3j9w
U
U
1
20.150931
5.906762
3.473934
0.086313
20.150931
3.873051
0
null
0
0
0
1
1
5no4
A
A
1
null
A
C
623
null
19.1634
identity
non-interacting
non-bp
non-bs
5no4_A_1_A_623_A_C
AC
5NO4_A_1_A_623_A_C
5no4
A
C
1
79.703323
28.557504
9.470813
0
79.703323
19.16342
0
null
0
0
0
1
1
6zxf
2
C
365
null
2
C
402
null
6.9966
identity
basepair
bp
non-bs
6zxf_2_365_2_402_C_C
CC
6ZXF_2_365_2_402_C_C
6zxf
C
C
1
60.631319
5.008276
4.807577
0
60.631319
10.56986
0
null
0
0
0
1
1
1yi2
0
G
1,093
null
0
U
1,264
null
2.9096
identity
basepair
bp
non-bs
1yi2_0_1093_0_1264_G_U
GU
1YI2_0_1093_0_1264_G_U
1yi2
G
U
1
11.749231
7.45251
2.856114
0
11.749231
3.177934
2
66.261892
0
0
1
1
1
2zjq
X
A
2,063
null
X
U
2,064
null
2.9223
identity
basestacks
non-bp
bs
2zjq_X_2063_X_2064_A_U
AU
2ZJQ_X_2063_X_2064_A_U
2zjq
A
U
1
6.960242
4.860538
3.163902
1.243526
6.960242
3.091544
1
85.517239
0
0
1
1
1
5ibb
13
A
8
null
13
C
19
null
22.1356
identity
non-interacting
non-bp
non-bs
5ibb_13_8_13_19_A_C
AC
5IBB_13_8_13_19_A_C
5ibb
A
C
1
53.876985
22.964873
8.354578
0
53.876985
23.123573
0
null
0
0
0
1
1
2zjq
X
U
873
null
X
A
929
null
2.6092
identity
basepair
bp
non-bs
2zjq_X_873_X_929_U_A
AU
2ZJQ_X_873_X_929_U_A
2zjq
U
A
1
34.39126
10.076858
1.501975
0
34.39126
3.264484
1
143.14546
1
1
1
1
1