pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
4x62_A_1351_A_1372_U_U
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4X62_A_1351_A_1372_U_U
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1yi2
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identity
basepair
bp
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142.213965
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1yi2
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identity
basestacks
non-bp
bs
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1yi2
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identity
basepair
bp
non-bs
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identity
basepair
bp
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basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
1yi2_9_36_9_37_C_C
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1YI2_9_36_9_37_C_C
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2zjq
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identity
basestacks
non-bp
bs
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1
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1
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identity
basestacks
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bs
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identity
basepair
bp
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identity
non-interacting
non-bp
non-bs
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identity
non-interacting
non-bp
non-bs
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identity
basepair
bp
non-bs
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identity
basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
3j9w_AA_690_AA_719_A_G
AG
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3j9w
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identity
non-interacting
non-bp
non-bs
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AU
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
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1
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1
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1
1
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identity
basestacks
non-bp
bs
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
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AA
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1
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1
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1
1
1
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null
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identity
basepair
bp
non-bs
1yi2_0_938_0_1033_G_C
CG
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1
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identity
basepair
bp
non-bs
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AC
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null
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identity
basestacks
non-bp
bs
1yi2_0_60_0_61_A_G
AG
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null
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identity
basestacks
non-bp
bs
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AU
2ZJQ_X_1984_X_2668_A_U
2zjq
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1
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0
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1
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null
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identity
basestacks
non-bp
bs
1yi2_0_2114_0_2472_C_C
CC
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1
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null
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1
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2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_1350_X_1351_G_G
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1
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0
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identity
basepair
bp
non-bs
4v50_CA_981_CA_1223_U_C
CU
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133.438323
1
1
1
1
1
1yi2
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identity
basestacks
non-bp
bs
1yi2_0_35_0_448_U_G
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1
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null
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identity
basestacks
non-bp
bs
3j9w_BA_1353_BA_1354_C_C
CC
3J9W_BA_1353_BA_1354_C_C
3j9w
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null
0
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1
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2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_227_X_228_G_A
AG
2ZJQ_X_227_X_228_G_A
2zjq
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1
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1
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0
0
1
1
1
3j9w
AA
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AA
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null
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identity
basestacks
non-bp
bs
3j9w_AA_1247_AA_1308_A_A
AA
3J9W_AA_1247_AA_1308_A_A
3j9w
A
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1
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null
0
0
0
1
1
2zjq
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null
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442
null
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identity
basepair
bp
non-bs
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AU
2ZJQ_X_240_X_442_U_A
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1
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null
0
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1yi2
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null
0
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null
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identity
basepair
bp
non-bs
1yi2_0_763_0_901_C_G
CG
1YI2_0_763_0_901_C_G
1yi2
C
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1
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3
123.35403
3
1
1
1
1
1yi2
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null
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identity
basepair
bp
non-bs
1yi2_0_1712_0_1815_A_A
AA
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1yi2
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1
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null
0
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1
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3j9w
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null
AA
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null
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identity
basestacks
non-bp
bs
3j9w_AA_569_AA_575_A_G
AG
3J9W_AA_569_AA_575_A_G
3j9w
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1
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null
0
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0
1
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322
null
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null
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identity
basepair
bp
non-bs
4x62_A_322_A_328_C_C
CC
4X62_A_322_A_328_C_C
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C
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1
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null
0
0
0
1
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6ozp
c
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null
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null
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identity
non-interacting
non-bp
non-bs
6ozp_c_11_C_14_A_U
AU
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6ozp
A
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1
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17.539658
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null
0
0
0
1
1
2zjq
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1,337
null
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identity
basestacks
non-bp
bs
2zjq_X_1336_X_1337_G_G
GG
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1
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null
0
0
0
1
1
2zjq
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1,361
null
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identity
basestacks
non-bp
bs
2zjq_X_1360_X_1361_G_G
GG
2ZJQ_X_1360_X_1361_G_G
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1
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1
103.631711
1
1
1
1
1
2zjq
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1,659
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identity
basepair
bp
non-bs
2zjq_X_1316_X_1659_G_G
GG
2ZJQ_X_1316_X_1659_G_G
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1
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30.078962
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null
0
0
0
1
1
6gqb
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10
null
1
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null
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identity
non-interacting
non-bp
non-bs
6gqb_1_10_1_16_C_A
AC
6GQB_1_10_1_16_C_A
6gqb
C
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1
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null
0
0
0
1
1
1yi2
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1,690
null
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identity
basepair
bp
non-bs
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AC
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null
0
0
0
1
1
1yi2
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null
0
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2,266
null
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identity
basepair
bp
non-bs
1yi2_0_1909_0_2266_A_A
AA
1YI2_0_1909_0_2266_A_A
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0
0
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identity
basepair
bp
non-bs
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identity
basestacks
non-bp
bs
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null
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identity
basestacks
non-bp
bs
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0
1
1
1
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identity
non-interacting
non-bp
non-bs
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CC
4LG2_J_9_I_9_C_C
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1
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identity
basestacks
non-bp
bs
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2ZJQ_X_1712_X_1713_G_G
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1
1
1
1
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identity
basepair
bp
non-bs
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identity
basepair
bp
non-bs
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1
1
1
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identity
basestacks
non-bp
bs
3j9w_AA_733_AA_734_G_G
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G
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null
0
0
0
1
1
1yi2
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239
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identity
basestacks
non-bp
bs
1yi2_0_239_0_432_C_G
CG
1YI2_0_239_0_432_C_G
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1
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100.099316
1
1
1
1
1
2zjq
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identity
basepair
bp
non-bs
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1
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null
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identity
basestacks
non-bp
bs
3j9w_BA_2587_BA_2588_C_C
CC
3J9W_BA_2587_BA_2588_C_C
3j9w
C
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null
0
0
0
1
1
2zjq
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C
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null
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null
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identity
basepair
bp
non-bs
2zjq_X_640_X_650_C_U
CU
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C
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1
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null
0
0
0
1
1
6zxf
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null
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identity
non-interacting
non-bp
non-bs
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GU
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1
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null
0
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0
1
1
3j9w
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null
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identity
basestacks
non-bp
bs
3j9w_AA_63_AA_105_G_G
GG
3J9W_AA_63_AA_105_G_G
3j9w
G
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1
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0
0
1
1
1
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identity
non-interacting
non-bp
non-bs
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AG
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G
A
1
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null
0
0
0
1
1
1yi2
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null
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identity
basestacks
non-bp
bs
1yi2_0_1367_0_1368_A_U
AU
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1yi2
A
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1
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1
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0
1
1
1
1yi2
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null
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identity
basepair
bp
non-bs
1yi2_0_1270_0_1271_U_A
AU
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U
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1
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113.659172
1
1
1
1
1
1yi2
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identity
basestacks
non-bp
bs
1yi2_0_1419_0_1685_U_A
AU
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1yi2
U
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1
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null
0
0
0
1
1
1yi2
0
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196
null
0
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416
null
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identity
basestacks
non-bp
bs
1yi2_0_196_0_416_G_G
GG
1YI2_0_196_0_416_G_G
1yi2
G
G
1
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35.039564
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null
0
0
0
1
1
1yi2
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null
0
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null
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identity
basepair
bp
non-bs
1yi2_0_310_0_321_U_A
AU
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1yi2
U
A
1
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2
123.540963
2
1
1
1
1
3j9w
AA
C
350
null
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null
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identity
basestacks
non-bp
bs
3j9w_AA_350_AA_351_C_U
CU
3J9W_AA_350_AA_351_C_U
3j9w
C
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1
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1
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1
1
1
1
1
6t2c
V
A
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null
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A
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null
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identity
non-interacting
non-bp
non-bs
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AA
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6t2c
A
A
1
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null
0
0
0
1
1
1yi2
0
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null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_2068_0_2069_G_U
GU
1YI2_0_2068_0_2069_G_U
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1
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3
114.002258
1
1
1
1
1
1nlc
A
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B
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null
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identity
non-interacting
non-bp
non-bs
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AG
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null
0
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0
1
1
4oq9
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null
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identity
basestacks
non-bp
bs
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UU
4OQ9_L_185_L_186_U_U
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U
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null
0
0
0
1
1
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null
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identity
non-interacting
non-bp
non-bs
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CC
6WUA_A_952_A_1188_C_C
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1
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null
0
0
0
1
1
4ujc
A2
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null
A2
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4,836
null
2.8656
identity
basepair
bp
non-bs
4ujc_A2_4835_A2_4836_C_U
CU
4UJC_A2_4835_A2_4836_C_U
4ujc
C
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1
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null
0
0
0
1
1
3lrr
C
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null
D
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null
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identity
basepair
bp
non-bs
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AU
3LRR_C_11_D_2_A_U
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A
U
1
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2
112.300785
2
1
1
1
1
1yi2
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null
0
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434
null
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identity
basepair
bp
non-bs
1yi2_0_191_0_434_A_U
AU
1YI2_0_191_0_434_A_U
1yi2
A
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1
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2
116.591891
2
1
1
1
1
2zjq
X
C
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null
X
U
132
null
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identity
basestacks
non-bp
bs
2zjq_X_131_X_132_C_U
CU
2ZJQ_X_131_X_132_C_U
2zjq
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1
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2
101.546298
2
1
1
1
1
1yi2
0
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null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_579_0_580_G_A
AG
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1
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2
120.756981
1
1
1
1
1
1yi2
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null
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null
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identity
basepair
bp
non-bs
1yi2_0_1043_0_1044_C_C
CC
1YI2_0_1043_0_1044_C_C
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C
C
1
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null
0
0
0
1
1
4lel
QA
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null
QA
C
295
null
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identity
non-interacting
non-bp
non-bs
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CG
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null
0
0
0
1
1
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1
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null
1
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null
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identity
non-interacting
non-bp
non-bs
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AC
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null
0
0
0
1
1
7k9e
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514
null
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identity
non-interacting
non-bp
non-bs
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GU
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7k9e
U
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1
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null
0
0
0
1
1
3j9w
AA
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null
AA
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null
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identity
basestacks
non-bp
bs
3j9w_AA_21_AA_927_C_G
CG
3J9W_AA_21_AA_927_C_G
3j9w
C
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1
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2
91.702105
1
1
1
1
1
2zjq
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null
X
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2,428
null
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identity
basepair
bp
non-bs
2zjq_X_2048_X_2428_C_U
CU
2ZJQ_X_2048_X_2428_C_U
2zjq
C
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1
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1
130.080554
1
1
1
1
1
2zjq
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null
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null
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identity
basepair
bp
non-bs
2zjq_X_1653_X_1751_C_A
AC
2ZJQ_X_1653_X_1751_C_A
2zjq
C
A
1
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null
0
0
0
1
1
1yi2
0
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453
null
0
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479
null
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identity
basepair
bp
non-bs
1yi2_0_453_0_479_A_G
AG
1YI2_0_453_0_479_A_G
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A
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1
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0
null
0
0
0
1
1
2zjq
X
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820
null
X
A
2,043
null
3.3891
identity
basepair
bp
non-bs
2zjq_X_820_X_2043_U_A
AU
2ZJQ_X_820_X_2043_U_A
2zjq
U
A
1
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1
129.818411
1
1
1
1
1
1yi2
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null
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29
null
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identity
basestacks
non-bp
bs
1yi2_9_28_9_29_U_C
CU
1YI2_9_28_9_29_U_C
1yi2
U
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1
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2
111.768327
2
1
1
1
1
1yi2
0
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1,767
null
0
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1,778
null
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identity
basestacks
non-bp
bs
1yi2_0_1767_0_1778_A_A
AA
1YI2_0_1767_0_1778_A_A
1yi2
A
A
1
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3.933811
0
null
0
0
0
1
1
1yi2
0
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null
0
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2,367
null
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identity
basepair
bp
non-bs
1yi2_0_2354_0_2367_A_A
AA
1YI2_0_2354_0_2367_A_A
1yi2
A
A
1
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1.58611
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3.930099
0
null
0
0
0
1
1
3k0j
E
G
12
null
E
A
75
null
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identity
non-interacting
non-bp
non-bs
3k0j_E_12_E_75_G_A
AG
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3k0j
G
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1
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49.863736
21.686259
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null
0
0
0
1
1
3j9w
AA
U
614
null
AA
G
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null
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identity
basestacks
non-bp
bs
3j9w_AA_614_AA_615_U_G
GU
3J9W_AA_614_AA_615_U_G
3j9w
U
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1
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0
0
1
1
1
5fw3
A
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14
null
A
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null
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identity
non-interacting
non-bp
non-bs
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GU
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5fw3
U
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57.702255
22.289916
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null
0
0
0
1
1
4v7s
AA
C
770
null
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C
899
null
2.9296
identity
basepair
bp
non-bs
4v7s_AA_770_AA_899_C_C
CC
4V7S_AA_770_AA_899_C_C
4v7s
C
C
1
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1
128.581656
1
1
1
1
1
6x7f
7
A
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a
A
1,919
null
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identity
non-interacting
non-bp
non-bs
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AA
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A
A
1
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20.442323
0
null
0
0
0
1
1
4lf5
A
G
7
null
A
U
561
null
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identity
non-interacting
non-bp
non-bs
4lf5_A_7_A_561_G_U
GU
4LF5_A_7_A_561_G_U
4lf5
G
U
1
55.191276
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0
55.191276
17.306404
0
null
0
0
0
1
1
2zjq
X
C
722
null
X
C
723
null
2.7723
identity
basestacks
non-bp
bs
2zjq_X_722_X_723_C_C
CC
2ZJQ_X_722_X_723_C_C
2zjq
C
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1
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null
0
0
0
1
1
2zjq
X
G
1,121
null
X
A
1,122
null
4.5261
identity
basestacks
non-bp
bs
2zjq_X_1121_X_1122_G_A
AG
2ZJQ_X_1121_X_1122_G_A
2zjq
G
A
1
13.174899
5.828065
3.995603
0
13.174899
4.785359
0
null
0
0
0
1
1
1yi2
0
G
545
null
0
C
546
null
3.2223
identity
basestacks
non-bp
bs
1yi2_0_545_0_546_G_C
CG
1YI2_0_545_0_546_G_C
1yi2
G
C
1
9.11986
5.003748
3.357872
2.963504
9.11986
3.262546
2
102.726357
1
1
1
1
1
3j9w
AA
U
517
null
AA
G
533
null
2.7577
identity
basestacks
non-bp
bs
3j9w_AA_517_AA_533_U_G
GU
3J9W_AA_517_AA_533_U_G
3j9w
U
G
1
25.142871
11.983755
2.54455
0
25.142871
2.757711
1
100.399358
1
1
1
1
1
3j9w
AA
A
831
null
AA
C
889
null
3.2951
identity
basestacks
non-bp
bs
3j9w_AA_831_AA_889_A_C
AC
3J9W_AA_831_AA_889_A_C
3j9w
A
C
1
15.106465
8.50284
3.018125
0
15.106465
3.915223
0
null
0
0
0
1
1