pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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basestacks
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bs
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bp
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basestacks
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bs
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basestacks
non-bp
bs
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basestacks
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bs
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non-bs
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basepair
bp
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bp
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identity
basepair
bp
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basepair
bp
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bp
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identity
basestacks
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bs
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basepair
bp
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non-bs
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basepair
bp
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identity
basepair
bp
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identity
non-interacting
non-bp
non-bs
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identity
basepair
bp
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1
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1
1
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identity
basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
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AU
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1
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identity
basepair
bp
non-bs
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AC
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null
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identity
basestacks
non-bp
bs
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AC
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C
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identity
basestacks
non-bp
bs
1yi2_0_944_0_945_G_U
GU
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1
1
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1
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identity
basestacks
non-bp
bs
1yi2_0_1570_0_1628_C_G
CG
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identity
basestacks
non-bp
bs
2zjq_X_618_X_619_A_A
AA
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null
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identity
non-interacting
non-bp
non-bs
1nlc_A_15_B_7_C_G
CG
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1nlc
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0
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identity
basepair
bp
non-bs
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CU
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null
0
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identity
basepair
bp
non-bs
3j9w_BA_138_BA_141_U_U
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1
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1yi2
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identity
basepair
bp
non-bs
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AC
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identity
basepair
bp
non-bs
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1
1
1
1
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null
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identity
basestacks
non-bp
bs
2zjq_X_649_X_661_G_C
CG
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1
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1
1
1
1
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E
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null
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identity
basepair
bp
non-bs
3k0j_E_44_E_45_A_A
AA
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3k0j
A
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1
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105.497503
1
1
1
1
1
1yi2
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null
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identity
basepair
bp
non-bs
1yi2_0_1625_0_1626_U_A
AU
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1
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null
0
0
0
1
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2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_1093_X_1094_U_C
CU
2ZJQ_X_1093_X_1094_U_C
2zjq
U
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1
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1
102.962808
1
1
1
1
1
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null
D
A
1,503
null
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identity
non-interacting
non-bp
non-bs
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AU
6X7F_7_-19_D_1503_U_A
6x7f
U
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1
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0
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18.775366
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null
0
0
0
1
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3j9w
AA
A
118
null
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A
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null
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identity
basestacks
non-bp
bs
3j9w_AA_118_AA_120_A_A
AA
3J9W_AA_118_AA_120_A_A
3j9w
A
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1
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null
0
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0
1
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3j9w
BA
A
247
null
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A
258
null
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identity
basestacks
non-bp
bs
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AA
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null
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0
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identity
basepair
bp
non-bs
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null
0
0
0
1
1
3j9w
BA
A
353
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A
374
null
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identity
basestacks
non-bp
bs
3j9w_BA_353_BA_374_A_A
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108.820254
1
1
1
1
1
1yi2
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identity
basestacks
non-bp
bs
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AC
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0
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0
1
1
3j9w
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null
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identity
basepair
bp
non-bs
3j9w_AA_1075_AA_1077_U_A
AU
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null
0
0
0
1
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3j9w
AA
C
174
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C
175
null
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identity
basestacks
non-bp
bs
3j9w_AA_174_AA_175_C_C
CC
3J9W_AA_174_AA_175_C_C
3j9w
C
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null
0
0
0
1
1
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A
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E
A
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190
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24.9924
identity
basepair
bp
non-bs
4lf5_A_190_A_190_U_U
UU
4LF5_A_190_A_190_U_U
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155.803277
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1
1
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identity
non-interacting
non-bp
non-bs
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null
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0
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1
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942
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4.0574
identity
basepair
bp
non-bs
4ujc_A2_941_A2_942_G_G
GG
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1
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null
0
0
0
1
1
6ywy
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null
A
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null
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identity
non-interacting
non-bp
non-bs
6ywy_A_21_A_28_U_U
UU
6YWY_A_21_A_28_U_U
6ywy
U
U
1
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null
0
0
0
1
1
1yi2
0
A
193
null
0
G
413
null
3.0695
identity
basepair
bp
non-bs
1yi2_0_193_0_413_A_G
AG
1YI2_0_193_0_413_A_G
1yi2
A
G
1
40.553591
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0
40.553591
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1
111.974054
1
1
1
1
1
1yi2
0
G
544
null
0
U
612
null
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identity
basepair
bp
non-bs
1yi2_0_544_0_612_G_U
GU
1YI2_0_544_0_612_G_U
1yi2
G
U
1
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0
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2
120.132429
2
1
1
1
1
1yi2
0
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0
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null
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identity
basepair
bp
non-bs
1yi2_0_1261_0_1262_A_C
AC
1YI2_0_1261_0_1262_A_C
1yi2
A
C
1
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0
null
0
0
0
1
1
1z7f
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B
C
16
null
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identity
non-interacting
non-bp
non-bs
1z7f_A_10_B_16_A_C
AC
1Z7F_A_10_B_16_A_C
1z7f
A
C
1
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null
0
0
0
1
1
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4,980
null
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identity
basepair
bp
non-bs
4ujc_A2_4977_A2_4980_U_C
CU
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null
0
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0
1
1
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identity
basestacks
non-bp
bs
3j9w_AA_990_AA_991_C_U
CU
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1
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identity
non-interacting
non-bp
non-bs
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AU
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null
0
0
0
1
1
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BA
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identity
basestacks
non-bp
bs
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AU
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A
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1
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null
0
0
0
1
1
1yi2
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null
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identity
basestacks
non-bp
bs
1yi2_0_1147_0_1148_C_C
CC
1YI2_0_1147_0_1148_C_C
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C
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null
0
0
0
1
1
5ew4
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C
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identity
non-interacting
non-bp
non-bs
5ew4_A_7_A_15_C_C
CC
5EW4_A_7_A_15_C_C
5ew4
C
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1
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null
0
0
0
1
1
2zjq
X
A
913
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914
null
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identity
basestacks
non-bp
bs
2zjq_X_913_X_914_A_C
AC
2ZJQ_X_913_X_914_A_C
2zjq
A
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1
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2
86.748548
0
0
1
1
1
2zjq
X
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null
X
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2,550
null
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identity
basestacks
non-bp
bs
2zjq_X_2493_X_2550_U_C
CU
2ZJQ_X_2493_X_2550_U_C
2zjq
U
C
1
21.223553
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0
null
0
0
0
1
1
6gqb
1
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5
null
1
A
122
null
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identity
non-interacting
non-bp
non-bs
6gqb_1_5_1_122_G_A
AG
6GQB_1_5_1_122_G_A
6gqb
G
A
1
45.867871
26.305605
21.110491
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45.867871
23.808758
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null
0
0
0
1
1
3j9w
AA
G
24
null
AA
A
924
null
3.1062
identity
basestacks
non-bp
bs
3j9w_AA_24_AA_924_G_A
AG
3J9W_AA_24_AA_924_G_A
3j9w
G
A
1
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1
87.229422
0
0
1
1
1
2zjq
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2,806
null
X
U
2,807
null
7.6015
identity
basepair
bp
non-bs
2zjq_X_2806_X_2807_G_U
GU
2ZJQ_X_2806_X_2807_G_U
2zjq
G
U
1
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8.595027
2.042754
0
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0
null
0
0
0
1
1
1yi2
0
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1,588
null
0
G
1,608
null
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identity
basepair
bp
non-bs
1yi2_0_1588_0_1608_G_G
GG
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1yi2
G
G
1
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1
75.170299
0
0
1
1
1
4csu
A
U
5
null
A
C
114
null
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identity
non-interacting
non-bp
non-bs
4csu_A_5_A_114_U_C
CU
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4csu
U
C
1
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0
null
0
0
0
1
1
4lf5
A
U
62
null
A
C
379
null
5.6959
identity
basepair
bp
non-bs
4lf5_A_62_A_379_U_C
CU
4LF5_A_62_A_379_U_C
4lf5
U
C
1
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0
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0
null
0
0
0
1
1
3ov7
D
U
6
null
D
A
7
null
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identity
basestacks
non-bp
bs
3ov7_D_6_D_7_U_A
AU
3OV7_D_6_D_7_U_A
3ov7
U
A
1
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2.809681
2
97.98742
2
1
1
1
1
2zjq
X
C
1,653
null
X
A
1,654
null
3.0008
identity
basepair
bp
non-bs
2zjq_X_1653_X_1654_C_A
AC
2ZJQ_X_1653_X_1654_C_A
2zjq
C
A
1
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2.922835
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0
null
0
0
0
1
1
1yi2
0
A
1,274
null
0
C
1,275
null
3.0369
identity
basestacks
non-bp
bs
1yi2_0_1274_0_1275_A_C
AC
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1yi2
A
C
1
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3.491401
1
74.170409
0
0
1
1
1
1yi2
0
G
561
null
0
A
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null
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identity
basestacks
non-bp
bs
1yi2_0_561_0_597_G_A
AG
1YI2_0_561_0_597_G_A
1yi2
G
A
1
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3.265687
2
102.506485
1
1
1
1
1
2zjq
Y
A
78
null
Y
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79
null
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identity
basestacks
non-bp
bs
2zjq_Y_78_Y_79_A_U
AU
2ZJQ_Y_78_Y_79_A_U
2zjq
A
U
1
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4.016921
0
null
0
0
0
1
1
5mga
B
U
-15
null
B
U
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null
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identity
non-interacting
non-bp
non-bs
5mga_B_-15_B_-5_U_U
UU
5MGA_B_-15_B_-5_U_U
5mga
U
U
1
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16.594724
6.833456
0
31.706299
9.371826
0
null
0
0
0
1
1
1yi2
0
U
1,977
null
0
G
1,986
null
3.3008
identity
basepair
bp
non-bs
1yi2_0_1977_0_1986_U_G
GU
1YI2_0_1977_0_1986_U_G
1yi2
U
G
1
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3.366164
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3.614319
0
null
0
0
0
1
1
3j9w
AA
U
666
null
AA
G
667
null
3.9774
identity
basestacks
non-bp
bs
3j9w_AA_666_AA_667_U_G
GU
3J9W_AA_666_AA_667_U_G
3j9w
U
G
1
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0.145882
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3.977384
0
null
0
0
0
1
1
2zjq
X
U
509
null
X
A
513
null
2.7496
identity
basepair
bp
non-bs
2zjq_X_509_X_513_U_A
AU
2ZJQ_X_509_X_513_U_A
2zjq
U
A
1
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0
3.337116
2.7496
2
141.764772
2
1
1
1
1
4x62
A
A
10
null
A
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566
null
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identity
non-interacting
non-bp
non-bs
4x62_A_10_A_566_A_G
AG
4X62_A_10_A_566_A_G
4x62
A
G
1
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22.4226
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0
57.716822
16.292525
0
null
0
0
0
1
1
3j9w
AA
U
695
null
AA
A
713
null
2.7916
identity
basepair
bp
non-bs
3j9w_AA_695_AA_713_U_A
AU
3J9W_AA_695_AA_713_U_A
3j9w
U
A
1
15.491816
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1.217721
0
15.491816
2.791578
2
108.020984
2
1
1
1
1
1yi2
0
A
1,746
null
0
G
1,752
null
3.1628
identity
basestacks
non-bp
bs
1yi2_0_1746_0_1752_A_G
AG
1YI2_0_1746_0_1752_A_G
1yi2
A
G
1
5.377507
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3.243689
3.073145
5.377507
3.413384
1
103.202658
1
1
1
1
1
1yi2
0
U
409
null
0
A
430
null
5.5857
identity
basepair
bp
non-bs
1yi2_0_409_0_430_U_A
AU
1YI2_0_409_0_430_U_A
1yi2
U
A
1
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0
29.182851
5.585705
0
null
0
0
0
1
1
2zjq
X
G
634
null
X
C
635
null
3.0606
identity
basestacks
non-bp
bs
2zjq_X_634_X_635_G_C
CG
2ZJQ_X_634_X_635_G_C
2zjq
G
C
1
19.103745
5.690022
2.983779
0
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0
null
0
0
0
1
1
1yi2
0
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1,324
null
0
G
1,325
null
3.1903
identity
basestacks
non-bp
bs
1yi2_0_1324_0_1325_G_G
GG
1YI2_0_1324_0_1325_G_G
1yi2
G
G
1
4.147739
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3.165518
0.784562
4.147739
3.423489
1
96.354205
1
1
1
1
1
1yi2
0
C
1,069
null
0
G
1,087
null
7.5233
identity
basepair
bp
non-bs
1yi2_0_1069_0_1087_C_G
CG
1YI2_0_1069_0_1087_C_G
1yi2
C
G
1
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0
23.198779
9.437373
0
null
0
0
0
1
1
1yi2
0
A
430
null
0
G
431
null
7.0212
identity
basepair
bp
non-bs
1yi2_0_430_0_431_A_G
AG
1YI2_0_430_0_431_A_G
1yi2
A
G
1
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57.032175
9.891886
0
null
0
0
0
1
1
6ff7
2
C
8
null
6
U
86
null
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identity
non-interacting
non-bp
non-bs
6ff7_2_8_6_86_C_U
CU
6FF7_2_8_6_86_C_U
6ff7
C
U
1
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11.21978
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27.162416
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0
null
0
0
0
1
1
2zjq
X
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2,519
null
X
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2,720
null
3.3867
identity
basepair
bp
non-bs
2zjq_X_2519_X_2720_C_A
AC
2ZJQ_X_2519_X_2720_C_A
2zjq
C
A
1
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null
0
0
0
1
1
1z7f
B
A
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null
C
U
28
null
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identity
non-interacting
non-bp
non-bs
1z7f_B_9_C_28_A_U
AU
1Z7F_B_9_C_28_A_U
1z7f
A
U
1
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12.288047
0
null
0
0
0
1
1
3j9w
AA
C
1,219
null
AA
U
1,220
null
4.4097
identity
basestacks
non-bp
bs
3j9w_AA_1219_AA_1220_C_U
CU
3J9W_AA_1219_AA_1220_C_U
3j9w
C
U
1
5.576909
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4.457395
1.848857
5.576909
4.541762
0
null
0
0
0
1
1
6x7f
7
G
-18
null
B
G
29
null
22.6147
identity
non-interacting
non-bp
non-bs
6x7f_7_-18_B_29_G_G
GG
6X7F_7_-18_B_29_G_G
6x7f
G
G
1
16.115761
30.435147
14.978669
0
16.115761
23.446966
0
null
0
0
0
1
1
2zjq
X
U
1,325
null
X
C
1,327
null
4.6914
identity
basepair
bp
non-bs
2zjq_X_1325_X_1327_U_C
CU
2ZJQ_X_1325_X_1327_U_C
2zjq
U
C
1
84.38445
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3.502127
0
84.38445
5.242427
0
null
0
0
0
1
1
1yi2
0
A
306
null
0
G
326
null
3.632
identity
basepair
bp
non-bs
1yi2_0_306_0_326_A_G
AG
1YI2_0_306_0_326_A_G
1yi2
A
G
1
32.820789
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2.251656
0
32.820789
4.816047
0
null
0
0
0
1
1
2zjq
X
C
2,860
null
X
A
2,861
null
3.3443
identity
basestacks
non-bp
bs
2zjq_X_2860_X_2861_C_A
AC
2ZJQ_X_2860_X_2861_C_A
2zjq
C
A
1
10.481716
5.126844
3.434964
0.011741
10.481716
3.720876
0
null
0
0
0
1
1
5no4
A
C
862
null
A
C
868
null
3.6334
identity
basepair
bp
non-bs
5no4_A_862_A_868_C_C
CC
5NO4_A_862_A_868_C_C
5no4
C
C
1
4.31004
8.488291
2.247555
0
4.31004
4.413692
0
null
0
0
0
1
1
3j9w
AA
A
987
null
AA
U
1,233
null
3.4489
identity
basestacks
non-bp
bs
3j9w_AA_987_AA_1233_A_U
AU
3J9W_AA_987_AA_1233_A_U
3j9w
A
U
1
12.448857
8.57633
3.559854
0.989368
12.448857
3.87562
0
null
0
0
0
1
1
1yi2
0
U
43
null
0
G
149
null
3.2664
identity
basestacks
non-bp
bs
1yi2_0_43_0_149_U_G
GU
1YI2_0_43_0_149_U_G
1yi2
U
G
1
8.164076
7.15622
3.184639
0
8.164076
3.674375
0
null
0
0
0
1
1
1yi2
0
C
613
null
0
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614
null
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identity
basestacks
non-bp
bs
1yi2_0_613_0_614_C_U
CU
1YI2_0_613_0_614_C_U
1yi2
C
U
1
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18.328473
3.221508
1
92.395981
1
1
1
1
1
4ujc
A2
G
347
null
A3
G
24
null
3.6433
identity
basepair
bp
non-bs
4ujc_A2_347_A3_24_G_G
GG
4UJC_A2_347_A3_24_G_G
4ujc
G
G
1
32.7403
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2.3225
0
32.7403
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0
null
0
0
0
1
1
4lf5
A
C
1,267
null
A
C
1,327
null
4.7404
identity
basepair
bp
non-bs
4lf5_A_1267_A_1327_C_C
CC
4LF5_A_1267_A_1327_C_C
4lf5
C
C
1
34.171407
7.281069
0.907895
0
34.171407
4.740398
0
null
0
0
0
1
1
3j9w
AA
C
121
null
AA
G
122
null
3.3046
identity
basestacks
non-bp
bs
3j9w_AA_121_AA_122_C_G
CG
3J9W_AA_121_AA_122_C_G
3j9w
C
G
1
19.818373
5.624613
3.221656
0
19.818373
3.687164
0
null
0
0
0
1
1
3j9w
BA
A
222
null
BA
U
237
null
3.4497
identity
basepair
bp
non-bs
3j9w_BA_222_BA_237_A_U
AU
3J9W_BA_222_BA_237_A_U
3j9w
A
U
1
29.566238
6.291555
2.009083
0
29.566238
6.301973
0
null
0
0
0
1
1
3j9w
AA
G
714
null
AA
A
715
null
3.1904
identity
basestacks
non-bp
bs
3j9w_AA_714_AA_715_G_A
AG
3J9W_AA_714_AA_715_G_A
3j9w
G
A
1
8.596464
5.394336
3.314488
1.31244
8.596464
4.271294
0
null
0
0
0
1
1