pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
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basepair
bp
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identity
basestacks
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bs
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basestacks
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bs
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bs
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basestacks
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identity
basestacks
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bs
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non-bs
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identity
basestacks
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bs
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basepair
bp
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identity
non-interacting
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non-bs
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identity
non-interacting
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non-bs
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CC
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basepair
bp
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non-interacting
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identity
non-interacting
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non-bs
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identity
basestacks
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bs
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basepair
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identity
basestacks
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basepair
bp
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identity
non-interacting
non-bp
non-bs
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identity
basepair
bp
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identity
basestacks
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bs
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identity
basepair
bp
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identity
non-interacting
non-bp
non-bs
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identity
basepair
bp
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identity
basestacks
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bs
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identity
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identity
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bs
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identity
basepair
bp
non-bs
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identity
basepair
bp
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identity
basestacks
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bs
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identity
basepair
bp
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identity
basestacks
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basepair
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identity
basestacks
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identity
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identity
basestacks
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bs
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identity
basestacks
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bs
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identity
basestacks
non-bp
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1
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1
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identity
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bp
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AC
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C
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1
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null
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identity
non-interacting
non-bp
non-bs
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U
1
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0
0
0
1
1
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identity
basepair
bp
non-bs
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1
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0
1
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identity
basepair
bp
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CC
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C
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1
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1
1
1
1
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AA
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identity
basestacks
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bs
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GG
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G
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1
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C
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null
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identity
basestacks
non-bp
bs
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CC
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C
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1
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0
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identity
basepair
bp
non-bs
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AG
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1
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1
1
1
1
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identity
basepair
bp
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AA
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identity
basepair
bp
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AA
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A
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C
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identity
non-interacting
non-bp
non-bs
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UU
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U
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1
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1
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0
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identity
basestacks
non-bp
bs
1yi2_0_1133_0_1134_A_G
AG
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1yi2
A
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1
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0
null
0
0
0
1
1
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G
U
9
null
G
C
11
null
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identity
non-interacting
non-bp
non-bs
6nmd_G_9_G_11_U_C
CU
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6nmd
U
C
1
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null
0
0
0
1
1
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X
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507
null
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identity
basepair
bp
non-bs
2zjq_X_493_X_507_A_A
AA
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A
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1
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1
137.618167
1
1
1
1
1
2zjq
X
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null
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461
null
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identity
basepair
bp
non-bs
2zjq_X_35_X_461_G_A
AG
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G
A
1
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X
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null
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identity
basepair
bp
non-bs
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AU
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2zjq
A
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1
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null
0
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0
1
1
2fmt
D
A
21
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C
48
null
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identity
basestacks
non-bp
bs
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AC
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2fmt
A
C
1
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1
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0
0
1
1
1
3j9w
BA
C
1,401
null
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C
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null
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identity
basestacks
non-bp
bs
3j9w_BA_1401_BA_1402_C_C
CC
3J9W_BA_1401_BA_1402_C_C
3j9w
C
C
1
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0
null
0
0
0
1
1
3j9w
BA
A
504
null
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A
517
null
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identity
basestacks
non-bp
bs
3j9w_BA_504_BA_517_A_A
AA
3J9W_BA_504_BA_517_A_A
3j9w
A
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1
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0
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1
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0
0
1
1
1
3j9w
BA
G
1,359
null
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1,362
null
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identity
basepair
bp
non-bs
3j9w_BA_1359_BA_1362_G_G
GG
3J9W_BA_1359_BA_1362_G_G
3j9w
G
G
1
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0
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0
null
0
0
0
1
1
2zjq
X
G
1,439
null
X
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null
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identity
basestacks
non-bp
bs
2zjq_X_1439_X_1440_G_G
GG
2ZJQ_X_1439_X_1440_G_G
2zjq
G
G
1
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2.299065
19.902081
3.162534
2
118.623708
1
1
1
1
1
1yi2
0
A
907
null
0
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1,299
null
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identity
basestacks
non-bp
bs
1yi2_0_907_0_1299_A_G
AG
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1yi2
A
G
1
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0
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2
71.656299
0
0
1
1
1
1yi2
0
A
242
null
0
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270
null
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identity
basepair
bp
non-bs
1yi2_0_242_0_270_A_U
AU
1YI2_0_242_0_270_A_U
1yi2
A
U
1
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1
92.891799
1
1
1
1
1
3j9w
AA
A
456
null
AA
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494
null
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identity
basestacks
non-bp
bs
3j9w_AA_456_AA_494_A_G
AG
3J9W_AA_456_AA_494_A_G
3j9w
A
G
1
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0
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1
87.832832
0
0
1
1
1
1yi2
0
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1,794
null
0
A
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null
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identity
basestacks
non-bp
bs
1yi2_0_1794_0_1796_G_A
AG
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G
A
1
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null
0
0
0
1
1
1yi2
0
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0
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null
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identity
basepair
bp
non-bs
1yi2_0_2659_0_2660_U_G
GU
1YI2_0_2659_0_2660_U_G
1yi2
U
G
1
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1
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1
1
1
1
1
3j9w
BA
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null
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identity
basestacks
non-bp
bs
3j9w_BA_941_BA_942_U_U
UU
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U
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1
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null
0
0
0
1
1
5no4
A
C
1,245
null
A
C
1,293
null
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identity
basepair
bp
non-bs
5no4_A_1245_A_1293_C_C
CC
5NO4_A_1245_A_1293_C_C
5no4
C
C
1
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0
null
0
0
0
1
1
6ywy
A
A
23
null
A
A
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null
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identity
non-interacting
non-bp
non-bs
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AA
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6ywy
A
A
1
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null
0
0
0
1
1
1yi2
0
C
707
null
0
G
720
null
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identity
basepair
bp
non-bs
1yi2_0_707_0_720_C_G
CG
1YI2_0_707_0_720_C_G
1yi2
C
G
1
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0
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0
null
0
0
0
1
1
2zjq
X
A
2,429
null
X
A
2,430
null
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identity
basestacks
non-bp
bs
2zjq_X_2429_X_2430_A_A
AA
2ZJQ_X_2429_X_2430_A_A
2zjq
A
A
1
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0
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0
null
0
0
0
1
1
3j9w
AA
C
1,106
null
AA
A
1,179
null
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identity
basepair
bp
non-bs
3j9w_AA_1106_AA_1179_C_A
AC
3J9W_AA_1106_AA_1179_C_A
3j9w
C
A
1
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0
32.743552
8.749488
0
null
0
0
0
1
1
1yi2
0
C
154
null
0
C
155
null
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identity
basestacks
non-bp
bs
1yi2_0_154_0_155_C_C
CC
1YI2_0_154_0_155_C_C
1yi2
C
C
1
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0
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0
null
0
0
0
1
1
3j9w
AA
G
11
null
AA
C
303
null
19.8515
identity
non-interacting
non-bp
non-bs
3j9w_AA_11_AA_303_G_C
CG
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3j9w
G
C
1
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0
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20.843732
0
null
0
0
0
1
1
6dti
A
A
10
null
A
A
519
null
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identity
non-interacting
non-bp
non-bs
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AA
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A
A
1
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null
0
0
0
1
1
6wua
a
C
956
null
a
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1,393
null
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identity
non-interacting
non-bp
non-bs
6wua_a_956_a_1393_C_C
CC
6WUA_A_956_A_1393_C_C
6wua
C
C
1
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null
0
0
0
1
1
1yi2
0
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639
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0
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640
null
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identity
basestacks
non-bp
bs
1yi2_0_639_0_640_A_G
AG
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A
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1
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1
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1
1
1
1
1
3j9w
AA
G
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null
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null
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identity
basepair
bp
non-bs
3j9w_AA_590_AA_769_G_G
GG
3J9W_AA_590_AA_769_G_G
3j9w
G
G
1
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2
173.341776
2
1
1
1
1
4ujc
A2
C
412
null
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14
null
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identity
basepair
bp
non-bs
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CU
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C
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1
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null
0
0
0
1
1
2jxs
A
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8
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B
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14
null
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identity
non-interacting
non-bp
non-bs
2jxs_A_8_B_14_A_C
AC
2JXS_A_8_B_14_A_C
2jxs
A
C
1
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null
0
0
0
1
1
2zjq
X
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222
null
X
C
230
null
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identity
basepair
bp
non-bs
2zjq_X_222_X_230_G_C
CG
2ZJQ_X_222_X_230_G_C
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G
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1
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124.826121
3
1
1
1
1
1yi2
0
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0
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1,184
null
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identity
basestacks
non-bp
bs
1yi2_0_1163_0_1184_G_C
CG
1YI2_0_1163_0_1184_G_C
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G
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1
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3
128.858919
1
1
1
1
1
2zjq
X
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null
X
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null
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identity
basestacks
non-bp
bs
2zjq_X_2614_X_2764_A_U
AU
2ZJQ_X_2614_X_2764_A_U
2zjq
A
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1
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2
113.973706
2
1
1
1
1
5fw3
A
U
2
null
A
U
12
null
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identity
non-interacting
non-bp
non-bs
5fw3_A_2_A_12_U_U
UU
5FW3_A_2_A_12_U_U
5fw3
U
U
1
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null
0
0
0
1
1
1yi2
0
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2,330
null
0
G
2,371
null
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identity
basestacks
non-bp
bs
1yi2_0_2330_0_2371_U_G
GU
1YI2_0_2330_0_2371_U_G
1yi2
U
G
1
8.626527
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3.586
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null
0
0
0
1
1
3j9w
AA
A
679
null
AA
U
745
null
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identity
basepair
bp
non-bs
3j9w_AA_679_AA_745_A_U
AU
3J9W_AA_679_AA_745_A_U
3j9w
A
U
1
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2
118.273284
2
1
1
1
1
2zjq
X
G
1,371
null
X
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1,387
null
3.2849
identity
basepair
bp
non-bs
2zjq_X_1371_X_1387_G_G
GG
2ZJQ_X_1371_X_1387_G_G
2zjq
G
G
1
15.214264
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15.214264
3.3772
1
87.976597
0
0
1
1
1
2zjq
X
U
521
null
X
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1,228
null
5.8426
identity
basepair
bp
non-bs
2zjq_X_521_X_1228_U_G
GU
2ZJQ_X_521_X_1228_U_G
2zjq
U
G
1
28.55528
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null
0
0
0
1
1
1lvj
A
U
23
null
A
U
42
null
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identity
non-interacting
non-bp
non-bs
1lvj_A_23_A_42_U_U
UU
1LVJ_A_23_A_42_U_U
1lvj
U
U
1
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null
0
0
0
1
1
1yi2
0
G
652
null
0
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653
null
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identity
basestacks
non-bp
bs
1yi2_0_652_0_653_G_U
GU
1YI2_0_652_0_653_G_U
1yi2
G
U
1
5.567494
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3.511029
5.567494
3.29609
2
98.769465
2
1
1
1
1
3b5a
B
A
18
null
C
U
46
null
2.9264
identity
basepair
bp
non-bs
3b5a_B_18_C_46_A_U
AU
3B5A_B_18_C_46_A_U
3b5a
A
U
1
12.995965
10.321251
0.122767
0
12.995965
2.926355
2
114.225271
2
1
1
1
1
6ozp
D
A
13
null
D
G
15
null
6.5567
identity
non-interacting
non-bp
non-bs
6ozp_D_13_D_15_A_G
AG
6OZP_D_13_D_15_A_G
6ozp
A
G
1
15.227245
10.593027
6.729154
0
15.227245
6.556709
0
null
0
0
0
1
1
1yi2
0
U
1,336
null
0
G
1,337
null
3.2826
identity
basestacks
non-bp
bs
1yi2_0_1336_0_1337_U_G
GU
1YI2_0_1336_0_1337_U_G
1yi2
U
G
1
9.829961
5.356311
3.286468
0
9.829961
3.282588
1
93.685653
1
1
1
1
1