pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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identity
basepair
bp
non-bs
2zjq_X_218_X_233_A_A
AA
2ZJQ_X_218_X_233_A_A
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1
1
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identity
non-interacting
non-bp
non-bs
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identity
basepair
bp
non-bs
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1
1
1
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1akx
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non-interacting
non-bp
non-bs
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basepair
bp
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basestacks
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non-interacting
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non-bs
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non-bs
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basepair
bp
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identity
basepair
bp
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basepair
bp
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1
1
1
1
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identity
basestacks
non-bp
bs
1yi2_0_742_0_743_G_G
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1yi2
G
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1
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1
1
1
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identity
basepair
bp
non-bs
2zjq_X_2245_X_2252_A_A
AA
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1
1
1yi2
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identity
basestacks
non-bp
bs
1yi2_0_2051_0_2052_G_U
GU
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1
1
1
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identity
basestacks
non-bp
bs
2zjq_X_2066_X_2067_G_U
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202
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identity
basepair
bp
non-bs
4ujc_A2_202_A2_206_C_U
CU
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identity
basestacks
non-bp
bs
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
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CU
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identity
basestacks
non-bp
bs
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identity
basepair
bp
non-bs
2zjq_X_967_X_973_G_U
GU
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G
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1
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1
1
1
1
1
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null
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identity
basestacks
non-bp
bs
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1
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null
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identity
non-interacting
non-bp
non-bs
4x62_A_9_A_916_G_G
GG
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null
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2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_1507_X_1516_A_A
AA
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identity
basestacks
non-bp
bs
3j9w_BA_342_BA_366_A_A
AA
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identity
basestacks
non-bp
bs
2zjq_X_2183_X_2184_C_C
CC
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null
0
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19
null
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identity
non-interacting
non-bp
non-bs
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CG
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null
0
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1
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3j9w
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identity
basestacks
non-bp
bs
3j9w_AA_130_AA_240_C_A
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1
1
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identity
basestacks
non-bp
bs
3j9w_AA_51_AA_372_U_A
AU
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identity
basepair
bp
non-bs
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null
0
0
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1
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3j9w
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identity
basepair
bp
non-bs
3j9w_AA_1493_BA_1988_A_G
AG
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A
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1
1
1
1
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null
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identity
basestacks
non-bp
bs
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GU
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2fmt
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1
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0
0
1
1
1
3j9w
AA
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null
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null
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identity
basestacks
non-bp
bs
3j9w_AA_96_AA_97_G_U
GU
3J9W_AA_96_AA_97_G_U
3j9w
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1
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1
90.957594
1
1
1
1
1
2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_2029_X_2030_G_U
GU
2ZJQ_X_2029_X_2030_G_U
2zjq
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1
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0
null
0
0
0
1
1
2zjq
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1,563
null
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1,564
null
3.3154
identity
basestacks
non-bp
bs
2zjq_X_1563_X_1564_U_U
UU
2ZJQ_X_1563_X_1564_U_U
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1
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111.214571
1
1
1
1
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AA
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null
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identity
basestacks
non-bp
bs
3j9w_AA_611_AA_646_A_U
AU
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1
1
1yi2
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null
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identity
basepair
bp
non-bs
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AG
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1
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null
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1
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identity
basepair
bp
non-bs
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1
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1yi2
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identity
basepair
bp
non-bs
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1
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null
0
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0
1
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1yi2
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null
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identity
basestacks
non-bp
bs
1yi2_0_569_0_590_A_A
AA
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null
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identity
basepair
bp
non-bs
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136.308635
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1
1
1
1
2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_2565_X_2566_C_A
AC
2ZJQ_X_2565_X_2566_C_A
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null
0
0
0
1
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null
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identity
non-interacting
non-bp
non-bs
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CG
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C
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null
0
0
0
1
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2zjq
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null
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1,606
null
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identity
basestacks
non-bp
bs
2zjq_X_1605_X_1606_A_C
AC
2ZJQ_X_1605_X_1606_A_C
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1
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null
0
0
0
1
1
1yi2
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null
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identity
basepair
bp
non-bs
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1
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1,828
null
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1,888
null
2.7708
identity
basepair
bp
non-bs
2zjq_X_1828_X_1888_C_C
CC
2ZJQ_X_1828_X_1888_C_C
2zjq
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1
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null
0
0
0
1
1
2zjq
X
C
33
null
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484
null
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identity
basestacks
non-bp
bs
2zjq_X_33_X_484_C_G
CG
2ZJQ_X_33_X_484_C_G
2zjq
C
G
1
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null
0
0
0
1
1
4oq9
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null
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188
null
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identity
basestacks
non-bp
bs
4oq9_k_187_k_188_U_U
UU
4OQ9_K_187_K_188_U_U
4oq9
U
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1
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0
null
0
0
0
1
1
1yi2
0
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506
null
0
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null
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identity
basepair
bp
non-bs
1yi2_0_506_0_511_G_A
AG
1YI2_0_506_0_511_G_A
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G
A
1
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2
133.617586
2
1
1
1
1
1yi2
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null
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null
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identity
basestacks
non-bp
bs
1yi2_9_56_9_57_A_A
AA
1YI2_9_56_9_57_A_A
1yi2
A
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1
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null
0
0
0
1
1
1yi2
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_2663_0_2664_U_A
AU
1YI2_0_2663_0_2664_U_A
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1
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1
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0
0
1
1
1
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533
null
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null
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identity
basestacks
non-bp
bs
2zjq_X_533_X_534_C_U
CU
2ZJQ_X_533_X_534_C_U
2zjq
C
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1
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1
113.522865
1
1
1
1
1
1yi2
0
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null
0
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null
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identity
basepair
bp
non-bs
1yi2_0_1432_0_1725_U_C
CU
1YI2_0_1432_0_1725_U_C
1yi2
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1
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null
0
0
0
1
1
4tzz
B
A
6
null
E
C
13
null
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identity
non-interacting
non-bp
non-bs
4tzz_B_6_E_13_A_C
AC
4TZZ_B_6_E_13_A_C
4tzz
A
C
1
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null
0
0
0
1
1
2zjq
X
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643
null
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651
null
7.2755
identity
basepair
bp
non-bs
2zjq_X_643_X_651_A_C
AC
2ZJQ_X_643_X_651_A_C
2zjq
A
C
1
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11.013179
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0
null
0
0
0
1
1
4ujc
AA
C
4
null
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4,505
null
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identity
non-interacting
non-bp
non-bs
4ujc_AA_4_A2_4505_C_G
CG
4UJC_AA_4_A2_4505_C_G
4ujc
C
G
1
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24.617135
0
null
0
0
0
1
1
4tzy
X
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18
null
X
A
55
null
21.8236
identity
non-interacting
non-bp
non-bs
4tzy_X_18_X_55_G_A
AG
4TZY_X_18_X_55_G_A
4tzy
G
A
1
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22.395478
0
null
0
0
0
1
1
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A
C
153
null
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169
null
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identity
basepair
bp
non-bs
4x62_A_153_A_169_C_C
CC
4X62_A_153_A_169_C_C
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C
C
1
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1
95.049592
1
1
1
1
1
1yi2
0
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612
null
0
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613
null
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identity
basestacks
non-bp
bs
1yi2_0_612_0_613_U_C
CU
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U
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1
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1
116.778634
1
1
1
1
1
3j9w
AA
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1,310
null
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null
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identity
basestacks
non-bp
bs
3j9w_AA_1310_AA_1312_U_C
CU
3J9W_AA_1310_AA_1312_U_C
3j9w
U
C
1
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0
null
0
0
0
1
1
3j9w
AA
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1,300
null
AA
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1,301
null
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identity
basestacks
non-bp
bs
3j9w_AA_1300_AA_1301_C_U
CU
3J9W_AA_1300_AA_1301_C_U
3j9w
C
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1
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3.060063
1
91.706576
1
1
1
1
1
1yi2
0
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341
null
0
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342
null
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identity
basepair
bp
non-bs
1yi2_0_341_0_342_C_C
CC
1YI2_0_341_0_342_C_C
1yi2
C
C
1
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0
null
0
0
0
1
1
3j9w
BA
A
490
null
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1,242
null
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identity
basestacks
non-bp
bs
3j9w_BA_490_BA_1242_A_U
AU
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3j9w
A
U
1
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null
0
0
0
1
1
3j9w
AA
A
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null
AA
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null
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identity
basestacks
non-bp
bs
3j9w_AA_1014_AA_1015_A_C
AC
3J9W_AA_1014_AA_1015_A_C
3j9w
A
C
1
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3.863397
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20.454273
3.712561
0
null
0
0
0
1
1
2zjq
X
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1,804
null
X
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1,805
null
3.7456
identity
basestacks
non-bp
bs
2zjq_X_1804_X_1805_U_G
GU
2ZJQ_X_1804_X_1805_U_G
2zjq
U
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1
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null
0
0
0
1
1
1yi2
0
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2,410
null
0
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2,418
null
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identity
basestacks
non-bp
bs
1yi2_0_2410_0_2418_G_G
GG
1YI2_0_2410_0_2418_G_G
1yi2
G
G
1
3.563576
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3.239465
0
3.563576
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1
114.387475
1
1
1
1
1
2zjq
X
C
825
null
X
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1,239
null
5.3337
identity
basepair
bp
non-bs
2zjq_X_825_X_1239_C_A
AC
2ZJQ_X_825_X_1239_C_A
2zjq
C
A
1
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32.621867
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0
null
0
0
0
1
1
2zjq
X
A
310
null
X
C
330
null
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identity
basepair
bp
non-bs
2zjq_X_310_X_330_A_C
AC
2ZJQ_X_310_X_330_A_C
2zjq
A
C
1
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0
null
0
0
0
1
1
3j9w
AA
U
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null
AA
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48
null
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identity
basestacks
non-bp
bs
3j9w_AA_47_AA_48_U_G
GU
3J9W_AA_47_AA_48_U_G
3j9w
U
G
1
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1
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0
0
1
1
1
3j9w
AA
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82
null
AA
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87
null
2.8795
identity
basepair
bp
non-bs
3j9w_AA_82_AA_87_G_C
CG
3J9W_AA_82_AA_87_G_C
3j9w
G
C
1
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0
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4
137.639565
4
1
1
1
1
2zjq
X
G
1,565
null
X
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1,566
null
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identity
basestacks
non-bp
bs
2zjq_X_1565_X_1566_G_G
GG
2ZJQ_X_1565_X_1566_G_G
2zjq
G
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1
4.537437
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3.000864
0.324197
4.537437
3.116699
1
100.210744
1
1
1
1
1
3j9w
BA
C
2,385
null
BA
A
2,390
null
2.9824
identity
basepair
bp
non-bs
3j9w_BA_2385_BA_2390_C_A
AC
3J9W_BA_2385_BA_2390_C_A
3j9w
C
A
1
6.376604
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1.203536
0
6.376604
3.060917
2
135.716256
2
1
1
1
1
2zjq
X
A
930
null
Y
U
82
null
6.1801
identity
basepair
bp
non-bs
2zjq_X_930_Y_82_A_U
AU
2ZJQ_X_930_Y_82_A_U
2zjq
A
U
1
49.860025
3.836732
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0
49.860025
8.338031
0
null
0
0
0
1
1
2zjq
X
A
576
null
X
U
577
null
3.6443
identity
basestacks
non-bp
bs
2zjq_X_576_X_577_A_U
AU
2ZJQ_X_576_X_577_A_U
2zjq
A
U
1
17.037753
5.2821
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0.787066
17.037753
4.092831
0
null
0
0
0
1
1
4lel
QA
G
7
null
QA
G
27
null
15.0107
identity
non-interacting
non-bp
non-bs
4lel_QA_7_QA_27_G_G
GG
4LEL_QA_7_QA_27_G_G
4lel
G
G
1
48.935869
14.445877
7.997247
0
48.935869
15.047098
0
null
0
0
0
1
1
1yi2
0
C
271
null
0
A
272
null
9.2039
identity
basepair
bp
non-bs
1yi2_0_271_0_272_C_A
AC
1YI2_0_271_0_272_C_A
1yi2
C
A
1
48.858031
7.829391
4.641661
0
48.858031
13.626952
0
null
0
0
0
1
1
3j9w
AA
G
1,318
null
AA
G
1,338
null
3.1024
identity
basestacks
non-bp
bs
3j9w_AA_1318_AA_1338_G_G
GG
3J9W_AA_1318_AA_1338_G_G
3j9w
G
G
1
3.040308
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3.129968
0
3.040308
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2
105.216345
1
1
1
1
1
3j9w
AA
U
873
null
AA
G
877
null
2.9643
identity
basestacks
non-bp
bs
3j9w_AA_873_AA_877_U_G
GU
3J9W_AA_873_AA_877_U_G
3j9w
U
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1
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2.732287
0
33.082009
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1
137.746378
1
1
1
1
1
3j9w
AA
G
794
null
AA
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807
null
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identity
basestacks
non-bp
bs
3j9w_AA_794_AA_807_G_U
GU
3J9W_AA_794_AA_807_G_U
3j9w
G
U
1
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3.179069
0
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3.196161
1
85.280684
0
0
1
1
1
3k0j
E
C
29
null
E
U
30
null
6.8063
identity
basepair
bp
non-bs
3k0j_E_29_E_30_C_U
CU
3K0J_E_29_E_30_C_U
3k0j
C
U
1
27.634514
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2.442223
0
27.634514
9.334835
0
null
0
0
0
1
1
1yi2
0
G
652
null
0
G
754
null
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identity
basestacks
non-bp
bs
1yi2_0_652_0_754_G_G
GG
1YI2_0_652_0_754_G_G
1yi2
G
G
1
3.058646
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3.224731
1.028571
3.058646
3.26426
1
102.577358
1
1
1
1
1
1yi2
0
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2,357
null
0
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2,371
null
4.8519
identity
basepair
bp
non-bs
1yi2_0_2357_0_2371_G_G
GG
1YI2_0_2357_0_2371_G_G
1yi2
G
G
1
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2.796453
0
46.807928
6.044137
0
null
0
0
0
1
1
2zjq
X
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659
null
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660
null
2.9115
identity
basestacks
non-bp
bs
2zjq_X_659_X_660_G_G
GG
2ZJQ_X_659_X_660_G_G
2zjq
G
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1
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3.18367
1.898922
8.22622
3.16662
3
122.034452
1
1
1
1
1
2zjq
X
G
166
null
X
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182
null
3.8527
identity
basepair
bp
non-bs
2zjq_X_166_X_182_G_G
GG
2ZJQ_X_166_X_182_G_G
2zjq
G
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1
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0
9.573246
4.368807
0
null
0
0
0
1
1
3j9w
AA
G
613
null
AA
U
614
null
3.1465
identity
basestacks
non-bp
bs
3j9w_AA_613_AA_614_G_U
GU
3J9W_AA_613_AA_614_G_U
3j9w
G
U
1
17.662486
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2.544901
17.662486
3.248529
2
79.220222
0
0
1
1
1
5no4
A
A
1
null
A
G
604
null
24.9395
identity
non-interacting
non-bp
non-bs
5no4_A_1_A_604_A_G
AG
5NO4_A_1_A_604_A_G
5no4
A
G
1
73.03683
30.093414
16.535043
0
73.03683
25.130091
0
null
0
0
0
1
1
2zjq
X
A
1,793
null
X
A
1,794
null
2.8412
identity
basestacks
non-bp
bs
2zjq_X_1793_X_1794_A_A
AA
2ZJQ_X_1793_X_1794_A_A
2zjq
A
A
1
18.770515
4.962578
3.537799
1.348905
18.770515
3.57419
0
null
0
0
0
1
1
2zjq
X
U
824
null
X
G
1,263
null
5.4797
identity
basepair
bp
non-bs
2zjq_X_824_X_1263_U_G
GU
2ZJQ_X_824_X_1263_U_G
2zjq
U
G
1
81.287928
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5.041556
0
81.287928
7.239941
0
null
0
0
0
1
1
1yi2
9
G
4
null
9
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5
null
3.2919
identity
basestacks
non-bp
bs
1yi2_9_4_9_5_G_G
GG
1YI2_9_4_9_5_G_G
1yi2
G
G
1
6.554938
5.842069
3.309129
0.210312
6.554938
3.513054
0
null
0
0
0
1
1
4oq9
f
U
181
null
f
U
182
null
4.8211
identity
basestacks
non-bp
bs
4oq9_f_181_f_182_U_U
UU
4OQ9_F_181_F_182_U_U
4oq9
U
U
1
17.04923
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3.304533
17.04923
5.569235
0
null
0
0
0
1
1
4ujc
A2
U
3,727
null
A2
C
3,736
null
3.4233
identity
basepair
bp
non-bs
4ujc_A2_3727_A2_3736_U_C
CU
4UJC_A2_3727_A2_3736_U_C
4ujc
U
C
1
27.893724
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1.517801
0
27.893724
4.044252
0
null
0
0
0
1
1
1yi2
0
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2,420
null
0
G
2,421
null
3.1355
identity
basestacks
non-bp
bs
1yi2_0_2420_0_2421_G_G
GG
1YI2_0_2420_0_2421_G_G
1yi2
G
G
1
15.238061
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3.381809
0.145823
15.238061
3.78156
0
null
0
0
0
1
1
1zo1
F
C
11
null
F
U
12
null
2.9474
identity
basestacks
non-bp
bs
1zo1_F_11_F_12_C_U
CU
1ZO1_F_11_F_12_C_U
1zo1
C
U
1
10.866861
5.149905
3.131556
0.181301
10.866861
2.947401
2
106.630293
1
1
1
1
1
1yi2
0
C
783
null
0
U
864
null
3.3294
identity
basestacks
non-bp
bs
1yi2_0_783_0_864_C_U
CU
1YI2_0_783_0_864_C_U
1yi2
C
U
1
16.118236
7.262458
2.842013
0
16.118236
4.284985
0
null
0
0
0
1
1
1yi2
0
A
1,194
null
0
U
1,206
null
3.2025
identity
basestacks
non-bp
bs
1yi2_0_1194_0_1206_A_U
AU
1YI2_0_1194_0_1206_A_U
1yi2
A
U
1
3.926759
5.804679
3.158299
0.17959
3.926759
3.585711
0
null
0
0
0
1
1
1yi2
0
G
856
null
0
U
858
null
3.3154
identity
basestacks
non-bp
bs
1yi2_0_856_0_858_G_U
GU
1YI2_0_856_0_858_G_U
1yi2
G
U
1
3.935679
4.081882
3.41221
2.848645
3.935679
3.351626
1
79.985577
0
0
1
1
1
1yi2
0
G
952
null
0
A
2,302
null
3.4153
identity
basestacks
non-bp
bs
1yi2_0_952_0_2302_G_A
AG
1YI2_0_952_0_2302_G_A
1yi2
G
A
1
7.956783
4.918841
3.394403
0.025553
7.956783
3.606995
0
null
0
0
0
1
1
1yi2
0
U
1,237
null
0
G
1,241
null
7.6356
identity
basepair
bp
non-bs
1yi2_0_1237_0_1241_U_G
GU
1YI2_0_1237_0_1241_U_G
1yi2
U
G
1
41.936652
11.429506
3.31773
0
41.936652
8.290669
0
null
0
0
0
1
1