pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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basestacks
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bs
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identity
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bp
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non-bs
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basestacks
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bs
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bp
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basestacks
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bs
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basestacks
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basestacks
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bs
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basestacks
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bs
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basepair
bp
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basestacks
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bs
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basestacks
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bs
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basepair
bp
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basestacks
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bs
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
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identity
basepair
bp
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identity
non-interacting
non-bp
non-bs
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identity
basepair
bp
non-bs
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AG
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1
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identity
basepair
bp
non-bs
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AC
3J9W_BA_821_BA_834_A_C
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A
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
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AU
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identity
basestacks
non-bp
bs
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identity
non-interacting
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non-bs
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identity
non-interacting
non-bp
non-bs
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
3j9w_BA_1489_BA_1490_U_A
AU
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identity
basestacks
non-bp
bs
1yi2_0_333_0_344_G_C
CG
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1
1
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1yi2
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identity
basepair
bp
non-bs
1yi2_0_692_0_2452_A_G
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2zjq
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identity
basestacks
non-bp
bs
2zjq_X_624_X_626_A_A
AA
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identity
basestacks
non-bp
bs
3j9w_AA_668_AA_669_C_A
AC
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identity
basestacks
non-bp
bs
2zjq_X_485_X_520_G_C
CG
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1
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1yi2
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identity
basestacks
non-bp
bs
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
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identity
basepair
bp
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
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bs
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114.527372
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identity
basepair
bp
non-bs
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identity
basestacks
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bs
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1
1
1
2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_46_X_47_C_G
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identity
basepair
bp
non-bs
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1
1
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identity
basestacks
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bs
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1
1
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identity
basepair
bp
non-bs
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identity
non-interacting
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non-bs
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null
0
0
0
1
1
2zjq
X
U
2,197
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X
U
2,198
null
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identity
basestacks
non-bp
bs
2zjq_X_2197_X_2198_U_U
UU
2ZJQ_X_2197_X_2198_U_U
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1
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1
132.234754
1
1
1
1
1
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0
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0
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identity
basepair
bp
non-bs
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AU
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U
A
1
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null
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0
0
1
1
4lg2
J
U
2
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J
U
8
null
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identity
non-interacting
non-bp
non-bs
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UU
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U
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1
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null
0
0
0
1
1
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AA
C
175
null
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G
176
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identity
basestacks
non-bp
bs
3j9w_AA_175_AA_176_C_G
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C
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identity
non-interacting
non-bp
non-bs
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CC
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F
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72
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identity
non-interacting
non-bp
non-bs
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1
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1
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AA
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571
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U
894
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identity
basestacks
non-bp
bs
3j9w_AA_571_AA_894_U_U
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1
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null
0
0
0
1
1
1yi2
0
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identity
basepair
bp
non-bs
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AC
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A
C
1
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null
0
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0
1
1
1yi2
0
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213
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225
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identity
basepair
bp
non-bs
1yi2_0_213_0_225_G_G
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G
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1
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0
null
0
0
0
1
1
4tzy
X
U
22
null
X
U
51
null
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identity
non-interacting
non-bp
non-bs
4tzy_X_22_X_51_U_U
UU
4TZY_X_22_X_51_U_U
4tzy
U
U
1
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27.168402
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0
null
0
0
0
1
1
1yi2
0
G
39
null
0
C
444
null
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identity
basestacks
non-bp
bs
1yi2_0_39_0_444_G_C
CG
1YI2_0_39_0_444_G_C
1yi2
G
C
1
5.819799
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3
83.824366
0
0
1
1
1
1yi2
0
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null
0
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2,500
null
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identity
basestacks
non-bp
bs
1yi2_0_2499_0_2500_U_C
CU
1YI2_0_2499_0_2500_U_C
1yi2
U
C
1
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null
0
0
0
1
1
1akx
A
C
19
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A
U
38
null
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identity
non-interacting
non-bp
non-bs
1akx_A_19_A_38_C_U
CU
1AKX_A_19_A_38_C_U
1akx
C
U
1
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null
0
0
0
1
1
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B
A
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3
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identity
non-interacting
non-bp
non-bs
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AG
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A
G
1
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10.806812
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12.43799
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null
0
0
0
1
1
1yi2
0
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1,729
null
0
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2,048
null
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identity
basestacks
non-bp
bs
1yi2_0_1729_0_2048_A_C
AC
1YI2_0_1729_0_2048_A_C
1yi2
A
C
1
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null
0
0
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1
1
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C
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C
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identity
non-interacting
non-bp
non-bs
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CC
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5u0a
C
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1
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null
0
0
0
1
1
5tzs
1
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1
G
458
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identity
non-interacting
non-bp
non-bs
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GU
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U
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1
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null
0
0
0
1
1
4oq9
e
U
184
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null
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identity
basestacks
non-bp
bs
4oq9_e_184_e_185_U_U
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1
1
1
1
420d
A
A
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C
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identity
non-interacting
non-bp
non-bs
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AC
420D_A_10_B_18_A_C
420d
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null
0
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0
1
1
3j9w
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455
null
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identity
basestacks
non-bp
bs
3j9w_AA_455_AA_495_G_U
GU
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3j9w
G
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null
0
0
0
1
1
3j9w
AA
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141
null
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A
209
null
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identity
basepair
bp
non-bs
3j9w_AA_141_AA_209_G_A
AG
3J9W_AA_141_AA_209_G_A
3j9w
G
A
1
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null
0
0
0
1
1
1yi2
0
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2,494
null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_2494_0_2529_G_G
GG
1YI2_0_2494_0_2529_G_G
1yi2
G
G
1
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108.525037
1
1
1
1
1
3j9w
BA
C
2,289
null
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C
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null
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identity
basestacks
non-bp
bs
3j9w_BA_2289_BA_2290_C_C
CC
3J9W_BA_2289_BA_2290_C_C
3j9w
C
C
1
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3.571586
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null
0
0
0
1
1
2zjq
X
G
1,173
null
X
G
1,174
null
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identity
basestacks
non-bp
bs
2zjq_X_1173_X_1174_G_G
GG
2ZJQ_X_1173_X_1174_G_G
2zjq
G
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1
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0.519467
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1
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0
0
1
1
1
3j9w
AA
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AA
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null
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identity
basepair
bp
non-bs
3j9w_AA_1445_AA_1475_U_C
CU
3J9W_AA_1445_AA_1475_U_C
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U
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132.181066
2
1
1
1
1
3k0j
E
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E
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82
null
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identity
non-interacting
non-bp
non-bs
3k0j_E_11_E_82_G_G
GG
3K0J_E_11_E_82_G_G
3k0j
G
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1
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null
0
0
0
1
1
4oq9
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187
null
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identity
basestacks
non-bp
bs
4oq9_i_186_i_187_U_U
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null
0
0
0
1
1
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A
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identity
non-interacting
non-bp
non-bs
6h0r_A_21_A_23_U_U
UU
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6h0r
U
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1
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null
0
0
0
1
1
3j9w
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null
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null
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identity
basestacks
non-bp
bs
3j9w_BA_3_BA_4_U_U
UU
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U
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1
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3.781227
0
null
0
0
0
1
1
2fmt
C
G
4
null
C
G
12
null
18.3572
identity
non-interacting
non-bp
non-bs
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GG
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2fmt
G
G
1
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0
null
0
0
0
1
1
1yi2
0
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2,112
null
0
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2,476
null
3.2989
identity
basestacks
non-bp
bs
1yi2_0_2112_0_2476_A_C
AC
1YI2_0_2112_0_2476_A_C
1yi2
A
C
1
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8.14939
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3.696286
0
null
0
0
0
1
1
1yi2
0
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309
null
0
U
310
null
3.2339
identity
basestacks
non-bp
bs
1yi2_0_309_0_310_C_U
CU
1YI2_0_309_0_310_C_U
1yi2
C
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1
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null
0
0
0
1
1
2zjq
X
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X
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1,353
null
3.1485
identity
basepair
bp
non-bs
2zjq_X_1325_X_1353_U_A
AU
2ZJQ_X_1325_X_1353_U_A
2zjq
U
A
1
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0
64.387227
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1
110.101115
1
1
1
1
1
1yi2
0
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641
null
0
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1,360
null
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identity
basepair
bp
non-bs
1yi2_0_641_0_1360_G_C
CG
1YI2_0_641_0_1360_G_C
1yi2
G
C
1
18.965824
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4
127.839509
3
1
1
1
1
1yi2
0
C
154
null
0
A
183
null
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identity
basestacks
non-bp
bs
1yi2_0_154_0_183_C_A
AC
1YI2_0_154_0_183_C_A
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C
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1
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1
98.592965
1
1
1
1
1
1yi2
0
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1,652
null
0
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1,653
null
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identity
basepair
bp
non-bs
1yi2_0_1652_0_1653_C_A
AC
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C
A
1
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null
0
0
0
1
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3b5a
C
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null
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identity
basestacks
non-bp
bs
3b5a_C_35_C_36_G_G
GG
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1
111.422314
1
1
1
1
1
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A
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null
A
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368
null
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identity
basepair
bp
non-bs
4lf5_A_56_A_368_U_U
UU
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4lf5
U
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1
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null
0
0
0
1
1
4csu
A
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4
null
A
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null
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identity
non-interacting
non-bp
non-bs
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CC
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C
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1
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null
0
0
0
1
1
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B
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null
B
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null
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identity
non-interacting
non-bp
non-bs
6icz_B_13_B_24_C_G
CG
6ICZ_B_13_B_24_C_G
6icz
C
G
1
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null
0
0
0
1
1
2zjq
X
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2,326
null
X
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2,327
null
2.9188
identity
basestacks
non-bp
bs
2zjq_X_2326_X_2327_C_U
CU
2ZJQ_X_2326_X_2327_C_U
2zjq
C
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1
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1
75.184128
0
0
1
1
1
3j9w
BA
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740
null
BA
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null
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identity
basestacks
non-bp
bs
3j9w_BA_740_BA_741_A_U
AU
3J9W_BA_740_BA_741_A_U
3j9w
A
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1
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1
92.347143
1
1
1
1
1
1yi2
0
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0
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null
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identity
basestacks
non-bp
bs
1yi2_0_1906_0_1934_C_A
AC
1YI2_0_1906_0_1934_C_A
1yi2
C
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1
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0
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0
1
1
4v50
AA
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null
AA
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296
null
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identity
non-interacting
non-bp
non-bs
4v50_AA_8_AA_296_A_U
AU
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4v50
A
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19.96295
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null
0
0
0
1
1
2zjq
X
A
613
null
X
G
636
null
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identity
basepair
bp
non-bs
2zjq_X_613_X_636_A_G
AG
2ZJQ_X_613_X_636_A_G
2zjq
A
G
1
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1
115.26395
1
1
1
1
1
4z4e
B
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null
B
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null
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identity
non-interacting
non-bp
non-bs
4z4e_B_1_B_6_U_A
AU
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4z4e
U
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1
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0
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0
1
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2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_1048_X_1049_U_C
CU
2ZJQ_X_1048_X_1049_U_C
2zjq
U
C
1
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null
0
0
0
1
1
2zjq
X
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null
X
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1,171
null
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identity
basepair
bp
non-bs
2zjq_X_1004_X_1171_A_A
AA
2ZJQ_X_1004_X_1171_A_A
2zjq
A
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null
0
0
0
1
1
2zjq
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null
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1,114
null
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identity
basepair
bp
non-bs
2zjq_X_1097_X_1114_A_A
AA
2ZJQ_X_1097_X_1114_A_A
2zjq
A
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1
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null
0
0
0
1
1
1yi2
0
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650
null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_650_0_756_C_A
AC
1YI2_0_650_0_756_C_A
1yi2
C
A
1
0.364523
7.507571
3.229496
0
0.364523
3.952614
0
null
0
0
0
1
1
1yi2
0
G
79
null
0
A
98
null
2.9902
identity
basepair
bp
non-bs
1yi2_0_79_0_98_G_A
AG
1YI2_0_79_0_98_G_A
1yi2
G
A
1
8.477889
9.359088
0.478383
0
8.477889
2.990172
1
120.686319
1
1
1
1
1
1yi2
0
A
408
null
0
A
429
null
2.8163
identity
basepair
bp
non-bs
1yi2_0_408_0_429_A_A
AA
1YI2_0_408_0_429_A_A
1yi2
A
A
1
58.928949
13.442398
0.944174
0
58.928949
2.816308
1
135.803959
1
1
1
1
1
6qzp
L5
C
6
null
L8
C
155
null
13.2359
identity
non-interacting
non-bp
non-bs
6qzp_L5_6_L8_155_C_C
CC
6QZP_L5_6_L8_155_C_C
6qzp
C
C
1
21.824512
14.927444
13.628644
3.465654
21.824512
13.235864
0
null
0
0
0
1
1