pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
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float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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basestacks
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bs
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AC
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3j9w
A
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identity
basepair
bp
non-bs
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AG
2ZJQ_X_516_X_517_G_A
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G
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1
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420d
A
A
3
null
B
A
26
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identity
non-interacting
non-bp
non-bs
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AA
420D_A_3_B_26_A_A
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A
A
1
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null
0
0
0
1
1
3b5a
A
C
9
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B
A
22
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identity
non-interacting
non-bp
non-bs
3b5a_A_9_B_22_C_A
AC
3B5A_A_9_B_22_C_A
3b5a
C
A
1
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null
0
0
0
1
1
2zjq
X
A
1,793
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A
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identity
basepair
bp
non-bs
2zjq_X_1793_X_1807_A_A
AA
2ZJQ_X_1793_X_1807_A_A
2zjq
A
A
1
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null
0
0
0
1
1
2zjq
X
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identity
basepair
bp
non-bs
2zjq_X_978_X_979_U_A
AU
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U
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1
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1
1
1
2zjq
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identity
basepair
bp
non-bs
2zjq_X_1433_X_1594_A_U
AU
2ZJQ_X_1433_X_1594_A_U
2zjq
A
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1
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1
1
1
1
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AA
A
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AA
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identity
basestacks
non-bp
bs
3j9w_AA_1493_AA_1494_A_U
AU
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A
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1zo1
F
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C
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identity
non-interacting
non-bp
non-bs
1zo1_F_6_F_74_U_C
CU
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1zo1
U
C
1
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null
0
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0
1
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3j9w
AA
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AA
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identity
basepair
bp
non-bs
3j9w_AA_24_AA_923_G_A
AG
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3j9w
G
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1
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null
0
0
0
1
1
1yi2
0
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identity
basepair
bp
non-bs
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AU
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1yi2
A
U
1
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117.884233
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1
1
1
1
1z7f
A
U
12
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A
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13
null
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identity
basestacks
non-bp
bs
1z7f_A_12_A_13_U_C
CU
1Z7F_A_12_A_13_U_C
1z7f
U
C
1
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1
102.908869
1
1
1
1
1
2zjq
X
G
620
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630
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identity
basepair
bp
non-bs
2zjq_X_620_X_630_G_G
GG
2ZJQ_X_620_X_630_G_G
2zjq
G
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1
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101.605601
1
1
1
1
1
2zjq
X
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1,695
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X
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null
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identity
basepair
bp
non-bs
2zjq_X_1695_X_1972_U_G
GU
2ZJQ_X_1695_X_1972_U_G
2zjq
U
G
1
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0
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1
147.209824
1
1
1
1
1
1yi2
0
A
566
null
0
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1,263
null
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identity
basepair
bp
non-bs
1yi2_0_566_0_1263_A_C
AC
1YI2_0_566_0_1263_A_C
1yi2
A
C
1
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null
0
0
0
1
1
1yi2
0
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246
null
0
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248
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identity
basepair
bp
non-bs
1yi2_0_246_0_248_G_A
AG
1YI2_0_246_0_248_G_A
1yi2
G
A
1
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null
0
0
0
1
1
3j9w
BA
C
573
null
BA
U
2,808
null
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identity
basestacks
non-bp
bs
3j9w_BA_573_BA_2808_C_U
CU
3J9W_BA_573_BA_2808_C_U
3j9w
C
U
1
41.020701
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6.145967
0
null
0
0
0
1
1
2zjq
X
G
464
null
X
G
469
null
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identity
basestacks
non-bp
bs
2zjq_X_464_X_469_G_G
GG
2ZJQ_X_464_X_469_G_G
2zjq
G
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1
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1
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0
0
1
1
1
1yi2
0
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0
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588
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identity
basepair
bp
non-bs
1yi2_0_569_0_588_A_G
AG
1YI2_0_569_0_588_A_G
1yi2
A
G
1
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null
0
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0
1
1
1yi2
0
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identity
basepair
bp
non-bs
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AU
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1yi2
A
U
1
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0
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0
1
1
3ov7
C
U
23
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C
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26
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identity
non-interacting
non-bp
non-bs
3ov7_C_23_C_26_U_A
AU
3OV7_C_23_C_26_U_A
3ov7
U
A
1
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null
0
0
0
1
1
2pn4
A
A
54
null
C
A
57
null
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identity
non-interacting
non-bp
non-bs
2pn4_A_54_C_57_A_A
AA
2PN4_A_54_C_57_A_A
2pn4
A
A
1
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null
0
0
0
1
1
3j9w
BA
A
2,100
null
BA
C
2,469
null
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identity
basepair
bp
non-bs
3j9w_BA_2100_BA_2469_A_C
AC
3J9W_BA_2100_BA_2469_A_C
3j9w
A
C
1
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0
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1
169.32424
1
1
1
1
1
2zjq
X
C
2,496
null
X
A
2,521
null
2.9323
identity
basestacks
non-bp
bs
2zjq_X_2496_X_2521_C_A
AC
2ZJQ_X_2496_X_2521_C_A
2zjq
C
A
1
10.664484
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3.280019
2
86.814159
0
0
1
1
1
2zjq
X
A
143
null
X
U
154
null
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identity
basepair
bp
non-bs
2zjq_X_143_X_154_A_U
AU
2ZJQ_X_143_X_154_A_U
2zjq
A
U
1
8.903766
10.508665
0.474623
0
8.903766
2.830014
2
114.778778
2
1
1
1
1
2zjq
X
C
711
null
X
A
748
null
4.8226
identity
basepair
bp
non-bs
2zjq_X_711_X_748_C_A
AC
2ZJQ_X_711_X_748_C_A
2zjq
C
A
1
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8.145686
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0
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0
null
0
0
0
1
1
2zjq
X
A
1,728
null
X
C
1,729
null
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identity
basestacks
non-bp
bs
2zjq_X_1728_X_1729_A_C
AC
2ZJQ_X_1728_X_1729_A_C
2zjq
A
C
1
7.219619
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3.463252
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7.219619
3.680717
0
null
0
0
0
1
1
1yi2
0
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23
null
0
G
1,364
null
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identity
basepair
bp
non-bs
1yi2_0_23_0_1364_G_G
GG
1YI2_0_23_0_1364_G_G
1yi2
G
G
1
34.98882
6.148798
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0
34.98882
10.168458
0
null
0
0
0
1
1
3j9w
AA
C
320
null
AA
A
321
null
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identity
basestacks
non-bp
bs
3j9w_AA_320_AA_321_C_A
AC
3J9W_AA_320_AA_321_C_A
3j9w
C
A
1
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4.064397
0
null
0
0
0
1
1
4v50
BB
U
1,864
null
BB
U
1,865
null
4.0553
identity
basestacks
non-bp
bs
4v50_BB_1864_BB_1865_U_U
UU
4V50_BB_1864_BB_1865_U_U
4v50
U
U
1
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24.535188
4.893075
0
null
0
0
0
1
1
6gqb
1
C
7
null
1
U
146
null
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identity
non-interacting
non-bp
non-bs
6gqb_1_7_1_146_C_U
CU
6GQB_1_7_1_146_C_U
6gqb
C
U
1
24.745707
15.35815
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0
24.745707
19.751844
0
null
0
0
0
1
1
3j9w
AA
C
887
null
AA
U
888
null
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identity
basestacks
non-bp
bs
3j9w_AA_887_AA_888_C_U
CU
3J9W_AA_887_AA_888_C_U
3j9w
C
U
1
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1
87.454984
0
0
1
1
1
3j9w
BA
C
1,922
null
BA
C
1,923
null
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identity
basestacks
non-bp
bs
3j9w_BA_1922_BA_1923_C_C
CC
3J9W_BA_1922_BA_1923_C_C
3j9w
C
C
1
16.048205
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16.048205
4.119594
0
null
0
0
0
1
1
3j9w
AA
C
1,055
null
AA
A
1,056
null
3.3215
identity
basestacks
non-bp
bs
3j9w_AA_1055_AA_1056_C_A
AC
3J9W_AA_1055_AA_1056_C_A
3j9w
C
A
1
10.302415
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0.586825
10.302415
3.845896
0
null
0
0
0
1
1
4v7s
BA
C
240
null
BA
C
257
null
2.7294
identity
basepair
bp
non-bs
4v7s_BA_240_BA_257_C_C
CC
4V7S_BA_240_BA_257_C_C
4v7s
C
C
1
19.285134
9.22934
1.107062
0
19.285134
2.729355
1
126.786252
1
1
1
1
1
2zjq
X
C
1,623
null
X
U
1,639
null
4.4127
identity
basepair
bp
non-bs
2zjq_X_1623_X_1639_C_U
CU
2ZJQ_X_1623_X_1639_C_U
2zjq
C
U
1
10.164418
12.546504
1.570428
0
10.164418
4.936325
0
null
0
0
0
1
1
6h0r
A
C
2
null
A
U
25
null
11.2685
identity
non-interacting
non-bp
non-bs
6h0r_A_2_A_25_C_U
CU
6H0R_A_2_A_25_C_U
6h0r
C
U
1
40.145304
16.898675
7.706729
0
40.145304
11.268454
0
null
0
0
0
1
1
2zjq
X
G
84
null
X
A
101
null
2.6632
identity
basepair
bp
non-bs
2zjq_X_84_X_101_G_A
AG
2ZJQ_X_84_X_101_G_A
2zjq
G
A
1
54.781287
7.579836
3.098309
0
54.781287
3.020973
1
99.171385
1
1
1
1
1
1yi2
0
C
1,517
null
0
A
1,670
null
2.8468
identity
basepair
bp
non-bs
1yi2_0_1517_0_1670_C_A
AC
1YI2_0_1517_0_1670_C_A
1yi2
C
A
1
16.836011
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2.788038
0
16.836011
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0
null
0
0
0
1
1
3b5a
A
C
8
null
B
G
4
null
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identity
non-interacting
non-bp
non-bs
3b5a_A_8_B_4_C_G
CG
3B5A_A_8_B_4_C_G
3b5a
C
G
1
46.685478
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0
46.685478
9.816874
0
null
0
0
0
1
1
1yi2
0
A
2,784
null
0
A
2,788
null
2.9413
identity
basepair
bp
non-bs
1yi2_0_2784_0_2788_A_A
AA
1YI2_0_2784_0_2788_A_A
1yi2
A
A
1
25.172699
12.485345
0.224474
0
25.172699
2.941333
2
136.057073
2
1
1
1
1
1yi2
0
U
43
null
0
G
44
null
3.2087
identity
basestacks
non-bp
bs
1yi2_0_43_0_44_U_G
GU
1YI2_0_43_0_44_U_G
1yi2
U
G
1
19.196514
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0
19.196514
3.208711
1
99.389352
1
1
1
1
1
1yi2
0
G
1,167
null
0
C
1,168
null
3.232
identity
basestacks
non-bp
bs
1yi2_0_1167_0_1168_G_C
CG
1YI2_0_1167_0_1168_G_C
1yi2
G
C
1
6.262785
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3.361132
3.150193
6.262785
3.334024
3
102.618722
1
1
1
1
1
1z7f
B
A
9
null
B
A
10
null
3.1534
identity
basestacks
non-bp
bs
1z7f_B_9_B_10_A_A
AA
1Z7F_B_9_B_10_A_A
1z7f
A
A
1
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14.47287
3.564082
0
null
0
0
0
1
1
1yi2
0
G
2,623
null
0
G
2,642
null
3.0529
identity
basestacks
non-bp
bs
1yi2_0_2623_0_2642_G_G
GG
1YI2_0_2623_0_2642_G_G
1yi2
G
G
1
16.694737
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3.269062
0
16.694737
3.071632
2
108.314828
2
1
1
1
1
4ujc
A2
A
1,592
null
A2
A
3,620
null
4.1449
identity
basepair
bp
non-bs
4ujc_A2_1592_A2_3620_A_A
AA
4UJC_A2_1592_A2_3620_A_A
4ujc
A
A
1
34.008618
9.503625
2.437835
0
34.008618
4.144873
0
null
0
0
0
1
1
1yi2
0
C
1,982
null
0
C
2,006
null
3.462
identity
basepair
bp
non-bs
1yi2_0_1982_0_2006_C_C
CC
1YI2_0_1982_0_2006_C_C
1yi2
C
C
1
5.2511
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basestacks
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basestacks
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bs
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basestacks
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bs
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identity
non-interacting
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non-bs
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non-bs
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identity
basestacks
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bs
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identity
basestacks
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bs
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identity
non-interacting
non-bp
non-bs
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identity
non-interacting
non-bp
non-bs
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GU
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0
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1
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identity
basestacks
non-bp
bs
1yi2_0_2073_0_2607_G_U
GU
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identity
non-interacting
non-bp
non-bs
6h0r_A_18_B_18_G_G
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identity
basestacks
non-bp
bs
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identity
non-interacting
non-bp
non-bs
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null
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identity
basestacks
non-bp
bs
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1
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identity
basestacks
non-bp
bs
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identity
non-interacting
non-bp
non-bs
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CC
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null
0
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
1yi2_0_1589_0_1590_G_A
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identity
basepair
bp
non-bs
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identity
basestacks
non-bp
bs
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identity
non-interacting
non-bp
non-bs
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basepair
bp
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basepair
bp
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identity
non-interacting
non-bp
non-bs
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identity
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identity
basestacks
non-bp
bs
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identity
basepair
bp
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identity
basepair
bp
non-bs
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1
1
1
1
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identity
basestacks
non-bp
bs
2zjq_X_2689_X_2690_C_A
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null
0
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1
1
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identity
basepair
bp
non-bs
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CC
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133.562499
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1
1
1
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identity
basestacks
non-bp
bs
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identity
basestacks
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bs
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identity
non-interacting
non-bp
non-bs
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1
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identity
basestacks
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bs
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identity
basestacks
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bs
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1
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
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identity
basepair
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bp
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1
1
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identity
basepair
bp
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1
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identity
basestacks
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bs
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1
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identity
basestacks
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bs
3j9w_BA_932_BA_933_C_C
CC
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100.917044
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1
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basepair
bp
non-bs
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1
1
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identity
basepair
bp
non-bs
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null
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1
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2zjq
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identity
basepair
bp
non-bs
2zjq_X_308_X_352_C_G
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1
1
1
1yi2
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identity
basestacks
non-bp
bs
1yi2_0_1255_0_1256_A_C
AC
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1
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2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_120_X_121_G_G
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1
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identity
basestacks
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bs
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1
1
1
1yi2
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2.9018
identity
basepair
bp
non-bs
1yi2_0_1072_0_1088_G_A
AG
1YI2_0_1072_0_1088_G_A
1yi2
G
A
1
47.168058
9.324055
1.650469
0
47.168058
2.901805
2
129.58044
2
1
1
1
1
3j9w
AA
U
427
null
AA
U
428
null
3.1417
identity
basestacks
non-bp
bs
3j9w_AA_427_AA_428_U_U
UU
3J9W_AA_427_AA_428_U_U
3j9w
U
U
1
9.268032
5.311981
3.509764
1.063557
9.268032
3.967464
0
null
0
0
0
1
1
3j9w
AA
G
82
null
AA
U
88
null
3.1415
identity
basestacks
non-bp
bs
3j9w_AA_82_AA_88_G_U
GU
3J9W_AA_82_AA_88_G_U
3j9w
G
U
1
38.165246
8.441213
2.943179
0
38.165246
3.142308
2
77.641512
0
0
1
1
1
3j9w
AA
G
625
null
AA
G
626
null
3.1717
identity
basestacks
non-bp
bs
3j9w_AA_625_AA_626_G_G
GG
3J9W_AA_625_AA_626_G_G
3j9w
G
G
1
9.925616
5.749975
3.085071
0.470729
9.925616
3.393374
1
87.966785
0
0
1
1
1