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chr1 16344605 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 inferior frontal gyrus;inferior occipital gyrus;postcentral gyrus;posterior cingulate gyrus
chr1 16344656 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 11 9 amygdala;cerebellum;inferior occipital gyrus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;posterior parahippocampal gyrus;precentral gyrus;supramarginal gyrus
chr1 16344676 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 65 39 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;septum;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16344711 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 lateral occipitotemporal gyrus;occipital gyrus
chr1 16344727 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 12 10 amygdala;caudate nucleus;inferior frontal gyrus;inferior occipital gyrus;lateral occipitotemporal gyrus;middle temporal gyrus;occipital gyrus;precentral gyrus;subiculum;thalamus
chr1 16344731 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 dentate gyrus;occipital gyrus;precentral gyrus
chr1 16344770 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 8 8 anterior cingulate gyrus;cuneus;inferior occipital gyrus;middle frontal gyrus;occipital gyrus;spinal cord dorsal;superior parietal lobule;superior temporal gyrus
chr1 16344773 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 53 36 amygdala;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16344790 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 14 11 anterior cingulate gyrus;cerebellum;inferior occipital gyrus;insular cortex;middle temporal gyrus;occipital gyrus;orbital gyrus;posterior parahippocampal gyrus;septum;superior temporal gyrus;supramarginal gyrus
chr1 16344799 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 posterior parahippocampal gyrus;precentral gyrus
chr1 16344807 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 annectant gyrus;inferior frontal gyrus;superior temporal gyrus
chr1 16344808 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 37 28 amygdala;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;geniculate nucleus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;pons;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16363425 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 9 8 caudate nucleus;inferior frontal gyrus;inferior occipital gyrus;lateral occipitotemporal gyrus;occipital gyrus;postcentral gyrus;posterior cingulate gyrus;subiculum
chr1 16363426 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 inferior occipital gyrus;posterior cingulate gyrus;subiculum
chr1 16363448 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 inferior occipital gyrus;superior parietal lobule
chr1 16363473 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 28 27 amygdala;annectant gyrus;anterior cingulate gyrus;caudate nucleus;claustrum;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;occipital gyrus;postcentral gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;putamen;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16363516 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 inferior frontal gyrus;insular cortex
chr1 16363523 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 inferior frontal gyrus;inferior temporal gyrus;insular cortex
chr1 16363539 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 amygdala;inferior temporal gyrus;orbital gyrus;posterior hypothalamus;subiculum;superior colliculus
chr1 16363650 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 cuneus;supramarginal gyrus
chr1 16363660 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 cuneus;middle frontal gyrus
chr1 16364798 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 11 10 claustrum;cuneus;inferior occipital gyrus;lateral occipitotemporal gyrus;middle temporal gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;precentral gyrus;superior parietal lobule
chr1 16364815 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 15 15 amygdala;anterior cingulate gyrus;cerebellum;cuneus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;posterior parahippocampal gyrus;precentral gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16364817 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 17 14 anterior hypothalamus;cerebellum;claustrum;cuneus;inferior occipital gyrus;middle temporal gyrus;postcentral gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;septum;straight gyrus;superior frontal gyrus;superior parietal lobule
chr1 16364820 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 11 10 dentate gyrus;inferior frontal gyrus;insular cortex;middle frontal gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16364821 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 15 14 amygdala;caudate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;middle frontal gyrus;orbital gyrus;posterior cingulate gyrus;posterior hippocampus;septum;subiculum;superior parietal lobule;superior temporal gyrus;thalamus
chr1 16364822 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 12 12 angular gyrus;annectant gyrus;claustrum;insular cortex;middle temporal gyrus;orbital gyrus;postcentral gyrus;precentral gyrus;septum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16364827 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 angular gyrus;inferior occipital gyrus;middle temporal gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;supramarginal gyrus
chr1 16364842 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 cuneus;putamen
chr1 16364848 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 27 23 amygdala;angular gyrus;annectant gyrus;cuneus;dentate gyrus;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16364849 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 34 25 amygdala;annectant gyrus;anterior hypothalamus;caudate nucleus;cerebellum;entorhinal cortex;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;septum;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16364861 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 11 11 caudate nucleus;entorhinal cortex;lateral occipitotemporal gyrus;postcentral gyrus;posterior hippocampus;septum;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16364863 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 inferior frontal gyrus;inferior temporal gyrus
chr1 16364864 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 9 9 dentate gyrus;inferior temporal gyrus;insular cortex;middle temporal gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;septum;subiculum;superior parietal lobule
chr1 16364870 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 geniculate nucleus;lateral occipitotemporal gyrus;middle temporal gyrus
chr1 16365008 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 15 14 geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;occipital gyrus;postcentral gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;subiculum
chr1 16365014 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 occipital gyrus;septum
chr1 16365027 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 13 12 caudate nucleus;dentate gyrus;entorhinal cortex;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior parahippocampal gyrus;putamen;septum;subiculum;superior temporal gyrus
chr1 16365031 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 68 42 amygdala;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16366074 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 lateral occipitotemporal gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus
chr1 16366100 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 annectant gyrus;cerebellum;subiculum
chr1 16376946 A G NONREP - ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 geniculate nucleus;pons;postcentral gyrus
chr1 16380789 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 amygdala;posterior cingulate gyrus
chr1 16380793 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 15 15 amygdala;annectant gyrus;anterior cingulate gyrus;caudate nucleus;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;orbital gyrus;posterior parahippocampal gyrus;precentral gyrus;straight gyrus;supramarginal gyrus;thalamus
chr1 16380812 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 amygdala;cuneus;inferior temporal gyrus;thalamus
chr1 16381938 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 cuneus;occipital gyrus;precentral gyrus;superior parietal lobule
chr1 16381952 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 11 10 caudate nucleus;inferior temporal gyrus;orbital gyrus;postcentral gyrus;posterior parahippocampal gyrus;septum;subiculum;superior frontal gyrus;superior parietal lobule;supramarginal gyrus
chr1 16381977 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 8 8 cerebellum;dentate gyrus;geniculate nucleus;inferior frontal gyrus;inferior temporal gyrus;postcentral gyrus;septum;superior parietal lobule
chr1 16382087 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 5 cerebellum;inferior frontal gyrus;postcentral gyrus;posterior cingulate gyrus;straight gyrus
chr1 16382099 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 annectant gyrus;lateral occipitotemporal gyrus;postcentral gyrus
chr1 16382114 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 posterior parahippocampal gyrus;precentral gyrus;supramarginal gyrus
chr1 16382126 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 annectant gyrus;septum
chr1 16383238 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 spinal cord dorsal;superior parietal lobule;supramarginal gyrus
chr1 16383290 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 entorhinal cortex;postcentral gyrus
chr1 16383315 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 lateral occipitotemporal gyrus;postcentral gyrus
chr1 16383373 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 33 24 amygdala;anterior cingulate gyrus;caudate nucleus;cerebellum;cuneus;dentate gyrus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16388968 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 lateral occipitotemporal gyrus;posterior cingulate gyrus;superior temporal gyrus
chr1 16389096 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 lateral occipitotemporal gyrus;posterior cingulate gyrus
chr1 16395090 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 inferior temporal gyrus;subiculum
chr1 16411106 T C NONREP - ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 1 geniculate nucleus
chr1 16416169 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 lateral occipitotemporal gyrus;precentral gyrus;superior parietal lobule
chr1 16416321 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 middle frontal gyrus;subiculum
chr1 16416331 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 middle frontal gyrus;straight gyrus
chr1 16423347 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 53 36 angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;precentral gyrus;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16424329 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 44 33 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16424330 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 70 42 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16424331 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 64 41 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16424351 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 7 7 caudate nucleus;pons;postcentral gyrus;spinal cord dorsal;subiculum;superior temporal gyrus;thalamus
chr1 16424367 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 17 14 amygdala;cuneus;inferior occipital gyrus;inferior temporal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior parahippocampal gyrus;septum;superior frontal gyrus;superior temporal gyrus;supramarginal gyrus
chr1 16424369 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 58 38 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord ventral;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16424372 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 pons;posterior cingulate gyrus;superior temporal gyrus
chr1 16424376 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 middle frontal gyrus;precentral gyrus
chr1 16424380 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 20 17 amygdala;angular gyrus;claustrum;cuneus;geniculate nucleus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;superior parietal lobule
chr1 16424385 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 precentral gyrus;septum
chr1 16424386 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 26 22 angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;supramarginal gyrus
chr1 16425032 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 inferior temporal gyrus;occipital gyrus
chr1 16426309 A G NONREP - ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 9 9 cuneus;middle temporal gyrus;occipital gyrus;posterior cingulate gyrus;precentral gyrus;spinal cord dorsal;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16426327 A G NONREP - ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 35 29 amygdala;angular gyrus;annectant gyrus;anterior hypothalamus;cuneus;dentate gyrus;geniculate nucleus;inferior frontal gyrus;inferior occipital gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16426530 A G NONREP - ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 15 15 amygdala;caudate nucleus;dentate gyrus;inferior temporal gyrus;medulla;middle temporal gyrus;occipital gyrus;posterior cingulate gyrus;posterior hippocampus;septum;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior temporal gyrus
chr1 16431525 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 cerebellum;geniculate nucleus
chr1 16431590 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 11 11 annectant gyrus;anterior cingulate gyrus;globus pallidus;inferior temporal gyrus;middle frontal gyrus;posterior cingulate gyrus;posterior hippocampus;septum;spinal cord dorsal;superior frontal gyrus;superior temporal gyrus
chr1 16431593 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 10 10 angular gyrus;cerebellum;globus pallidus;middle frontal gyrus;posterior cingulate gyrus;posterior hippocampus;septum;subiculum;substantia nigra;supramarginal gyrus
chr1 16433024 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 amygdala;posterior cingulate gyrus;superior parietal lobule
chr1 16433047 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 amygdala;caudate nucleus;entorhinal cortex;superior frontal gyrus
chr1 16433051 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 28 22 anterior cingulate gyrus;cerebellum;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;occipital gyrus;pons;posterior cingulate gyrus;precentral gyrus;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior temporal gyrus;supramarginal gyrus
chr1 16433055 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 17 15 angular gyrus;anterior hippocampus;entorhinal cortex;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;middle temporal gyrus;posterior hypothalamus;septum;spinal cord dorsal;subiculum;superior frontal gyrus;superior temporal gyrus;supramarginal gyrus
chr1 16433279 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 9 9 amygdala;claustrum;insular cortex;lateral occipitotemporal gyrus;occipital gyrus;postcentral gyrus;straight gyrus;superior temporal gyrus;supramarginal gyrus
chr1 16433280 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 7 7 claustrum;dentate gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;supramarginal gyrus
chr1 16433283 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 15 13 amygdala;cerebellum;claustrum;inferior occipital gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;septum;straight gyrus;supramarginal gyrus
chr1 16433284 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 cerebellum;orbital gyrus
chr1 16433394 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 amygdala;anterior cingulate gyrus;dentate gyrus;medulla;posterior parahippocampal gyrus;supramarginal gyrus
chr1 16433460 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 16 13 cerebellum;inferior occipital gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;spinal cord dorsal;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16433916 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 32 25 amygdala;anterior cingulate gyrus;caudate nucleus;cuneus;dentate gyrus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;septum;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16433922 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 occipital gyrus;orbital gyrus;posterior hippocampus
chr1 16433923 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 entorhinal cortex;straight gyrus
chr1 16433970 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 11 10 caudate nucleus;dentate gyrus;inferior frontal gyrus;lateral occipitotemporal gyrus;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior parahippocampal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16433990 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 9 8 caudate nucleus;cuneus;geniculate nucleus;lateral occipitotemporal gyrus;postcentral gyrus;precentral gyrus;septum;supramarginal gyrus
chr1 16434000 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 13 12 amygdala;caudate nucleus;cuneus;dentate gyrus;geniculate nucleus;inferior frontal gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;postcentral gyrus;precentral gyrus;superior parietal lobule;supramarginal gyrus
chr1 16434041 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 precentral gyrus;subiculum;superior temporal gyrus
chr1 16434060 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 11 10 amygdala;cerebellum;cuneus;inferior temporal gyrus;middle temporal gyrus;postcentral gyrus;precentral gyrus;putamen;straight gyrus;supramarginal gyrus