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chr1 16461979 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 43 30 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;cerebellum;cuneus;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;septum;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16469184 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 amygdala;lateral occipitotemporal gyrus;orbital gyrus;precentral gyrus;septum;substantia nigra
chr1 16469280 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 7 7 amygdala;annectant gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;subiculum;superior parietal lobule;supramarginal gyrus
chr1 16475054 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 orbital gyrus;spinal cord dorsal;superior frontal gyrus;superior temporal gyrus
chr1 16475219 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 20 19 amygdala;annectant gyrus;anterior cingulate gyrus;caudate nucleus;cerebellum;claustrum;dentate gyrus;entorhinal cortex;inferior frontal gyrus;lateral occipitotemporal gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16475245 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 lateral occipitotemporal gyrus;posterior cingulate gyrus;precentral gyrus;spinal cord dorsal;superior frontal gyrus
chr1 16475286 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 cuneus;middle frontal gyrus;middle temporal gyrus
chr1 16476794 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 13 12 amygdala;anterior cingulate gyrus;cerebellum;geniculate nucleus;inferior frontal gyrus;middle temporal gyrus;postcentral gyrus;posterior parahippocampal gyrus;precentral gyrus;subiculum;superior frontal gyrus;superior temporal gyrus
chr1 16479316 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 14 12 anterior hypothalamus;caudate nucleus;inferior occipital gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;posterior parahippocampal gyrus;septum;spinal cord dorsal;straight gyrus;subiculum;supramarginal gyrus
chr1 16479328 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 68 41 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16479346 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 2 cerebellum;middle temporal gyrus
chr1 16479391 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 9 9 amygdala;inferior occipital gyrus;insular cortex;middle temporal gyrus;pons;posterior parahippocampal gyrus;putamen;superior colliculus;superior parietal lobule
chr1 16480074 A G REP DNA/TcMar-Tigger ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 14 14 angular gyrus;annectant gyrus;caudate nucleus;claustrum;cuneus;entorhinal cortex;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;orbital gyrus;posterior cingulate gyrus;posterior hippocampus;precentral gyrus;superior parietal lobule
chr1 16480547 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 3 cerebellum;entorhinal cortex;inferior temporal gyrus
chr1 16480561 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 cerebellum;posterior parahippocampal gyrus
chr1 16480600 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 middle temporal gyrus;occipital gyrus;thalamus
chr1 16480612 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 17 15 anterior cingulate gyrus;cerebellum;claustrum;cuneus;entorhinal cortex;inferior temporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;posterior cingulate gyrus;precentral gyrus;putamen;septum;subiculum;superior temporal gyrus
chr1 16494027 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 anterior cingulate gyrus;postcentral gyrus
chr1 16494080 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 inferior occipital gyrus;postcentral gyrus;posterior cingulate gyrus;precentral gyrus;superior parietal lobule;superior temporal gyrus
chr1 16494089 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 entorhinal cortex;middle frontal gyrus;putamen
chr1 16494094 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 31 26 amygdala;anterior cingulate gyrus;caudate nucleus;entorhinal cortex;globus pallidus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle temporal gyrus;occipital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;septum;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16494095 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 32 26 amygdala;angular gyrus;anterior cingulate gyrus;caudate nucleus;cerebellum;entorhinal cortex;geniculate nucleus;globus pallidus;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;medulla;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;septum;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16494106 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 dentate gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;superior frontal gyrus;superior parietal lobule
chr1 16495293 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 middle temporal gyrus;occipital gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;subiculum
chr1 16495303 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 8 8 caudate nucleus;cerebellum;cuneus;inferior frontal gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;occipital gyrus
chr1 16495310 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 2 cerebellum;inferior frontal gyrus
chr1 16495324 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 anterior hypothalamus;cerebellum;inferior frontal gyrus;inferior occipital gyrus;middle temporal gyrus;precentral gyrus
chr1 16495326 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 35 26 amygdala;cerebellum;cuneus;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord ventral;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;thalamus
chr1 16495341 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 occipital gyrus;supramarginal gyrus
chr1 16495342 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 25 23 anterior hippocampus;caudate nucleus;cerebellum;dentate gyrus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;middle frontal gyrus;occipital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16497554 A G NONREP - ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 5 anterior hypothalamus;claustrum;posterior cingulate gyrus;spinal cord dorsal;supramarginal gyrus
chr1 16500636 A G REP DNA/hAT-Charlie ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 45 42 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16501591 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 10 10 angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;insular cortex;middle frontal gyrus;posterior parahippocampal gyrus;septum;subiculum;superior frontal gyrus
chr1 16501625 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 21 19 amygdala;angular gyrus;anterior cingulate gyrus;claustrum;globus pallidus;insular cortex;lateral occipitotemporal gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;superior frontal gyrus
chr1 16501672 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 caudate nucleus;preoptic area
chr1 16501684 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 16 14 angular gyrus;caudate nucleus;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior temporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;posterior parahippocampal gyrus;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus
chr1 16501752 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 angular gyrus;entorhinal cortex;lateral occipitotemporal gyrus;septum;straight gyrus
chr1 16501769 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 putamen;spinal cord ventral
chr1 16501786 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 26 20 angular gyrus;anterior cingulate gyrus;anterior hippocampus;cerebellum;cuneus;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;postcentral gyrus;precentral gyrus;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16501813 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 amygdala;lateral occipitotemporal gyrus;pons;precentral gyrus;spinal cord dorsal;superior frontal gyrus
chr1 16501832 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 inferior frontal gyrus;medulla;pons;putamen;superior frontal gyrus;superior parietal lobule
chr1 16501844 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 8 8 cuneus;globus pallidus;inferior frontal gyrus;insular cortex;middle frontal gyrus;spinal cord dorsal;superior frontal gyrus;superior parietal lobule
chr1 16505541 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 amygdala;cerebellum
chr1 16505574 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 orbital gyrus;posterior hippocampus;superior frontal gyrus
chr1 16505582 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 orbital gyrus;posterior hippocampus
chr1 16505608 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 entorhinal cortex;insular cortex
chr1 16507567 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 3 globus pallidus;orbital gyrus;supramarginal gyrus
chr1 16511765 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 61 38 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16511772 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 13 10 angular gyrus;anterior hypothalamus;globus pallidus;midbrain;middle frontal gyrus;posterior cingulate gyrus;precentral gyrus;putamen;superior frontal gyrus;supramarginal gyrus
chr1 16511777 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 2 inferior occipital gyrus;superior frontal gyrus
chr1 16511813 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 12 11 inferior occipital gyrus;inferior temporal gyrus;middle temporal gyrus;occipital gyrus;posterior cingulate gyrus;precentral gyrus;septum;straight gyrus;substantia nigra;superior parietal lobule;superior temporal gyrus
chr1 16512090 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 39 31 amygdala;angular gyrus;anterior cingulate gyrus;caudate nucleus;cerebellum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;supramarginal gyrus;thalamus
chr1 16512112 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 34 28 amygdala;angular gyrus;anterior cingulate gyrus;cerebellum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16512117 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 anterior cingulate gyrus;globus pallidus;inferior occipital gyrus;precentral gyrus
chr1 16512137 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 9 9 anterior cingulate gyrus;caudate nucleus;cerebellum;inferior temporal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;posterior parahippocampal gyrus;putamen;supramarginal gyrus
chr1 16512138 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 anterior cingulate gyrus;anterior hippocampus;cerebellum;lateral occipitotemporal gyrus;putamen;straight gyrus
chr1 16512206 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 72 41 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16512226 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 30 24 amygdala;angular gyrus;anterior hippocampus;anterior hypothalamus;cerebellum;claustrum;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;straight gyrus;superior parietal lobule;supramarginal gyrus
chr1 16512232 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 cuneus;lateral occipitotemporal gyrus;precentral gyrus
chr1 16512248 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 inferior occipital gyrus;subiculum;superior parietal lobule
chr1 16512249 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 63 38 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;septum;spinal cord dorsal;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16512278 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 17 15 amygdala;angular gyrus;anterior hippocampus;cerebellum;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;occipital gyrus;orbital gyrus;precentral gyrus;superior parietal lobule;superior temporal gyrus
chr1 16512281 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 angular gyrus;insular cortex
chr1 16512285 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 amygdala;angular gyrus;anterior hippocampus;occipital gyrus;orbital gyrus;precentral gyrus
chr1 16512302 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 46 36 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16512342 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 angular gyrus;lateral occipitotemporal gyrus;orbital gyrus
chr1 16512389 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 angular gyrus;inferior temporal gyrus;occipital gyrus;superior parietal lobule;supramarginal gyrus
chr1 16512407 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 52 34 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;geniculate nucleus;globus pallidus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16512408 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 76 43 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16512417 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 amygdala;occipital gyrus
chr1 16512421 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 angular gyrus;lateral occipitotemporal gyrus;posterior parahippocampal gyrus
chr1 16512429 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 caudate nucleus;claustrum
chr1 16512433 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 12 12 amygdala;annectant gyrus;cerebellum;claustrum;cuneus;inferior occipital gyrus;inferior temporal gyrus;occipital gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;superior frontal gyrus;superior parietal lobule
chr1 16512452 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 globus pallidus;precentral gyrus;superior frontal gyrus
chr1 16512460 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 74 41 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;cerebellum;claustrum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16512476 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 8 8 annectant gyrus;anterior cingulate gyrus;inferior frontal gyrus;inferior occipital gyrus;lateral occipitotemporal gyrus;orbital gyrus;spinal cord dorsal;substantia nigra
chr1 16512972 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 21 20 amygdala;annectant gyrus;anterior cingulate gyrus;geniculate nucleus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;spinal cord dorsal;spinal cord ventral;straight gyrus;superior frontal gyrus;superior parietal lobule
chr1 16512992 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 27 21 amygdala;annectant gyrus;caudate nucleus;cerebellum;claustrum;cuneus;entorhinal cortex;geniculate nucleus;inferior occipital gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;spinal cord dorsal;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16513018 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 19 18 amygdala;angular gyrus;caudate nucleus;claustrum;entorhinal cortex;inferior frontal gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;middle temporal gyrus;postcentral gyrus;posterior parahippocampal gyrus;precentral gyrus;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;supramarginal gyrus
chr1 16513029 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 inferior occipital gyrus;precentral gyrus
chr1 16513053 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 geniculate nucleus;spinal cord dorsal
chr1 16513066 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 anterior cingulate gyrus;pons;posterior cingulate gyrus;substantia nigra
chr1 16513075 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 cerebellum;cuneus
chr1 16513078 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 25 21 amygdala;anterior cingulate gyrus;claustrum;dentate gyrus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;insular cortex;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior hippocampus;precentral gyrus;septum;spinal cord dorsal;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16513100 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 32 26 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;cerebellum;cuneus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;medulla;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;septum;spinal cord dorsal;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;thalamus
chr1 16513154 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 78 45 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16513199 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 22 21 amygdala;angular gyrus;anterior hippocampus;cerebellum;cuneus;entorhinal cortex;geniculate nucleus;insular cortex;middle frontal gyrus;occipital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;septum;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16513208 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 26 26 amygdala;angular gyrus;annectant gyrus;anterior hippocampus;anterior hypothalamus;cerebellum;claustrum;entorhinal cortex;geniculate nucleus;globus pallidus;inferior temporal gyrus;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;septum;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16513209 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 14 14 amygdala;angular gyrus;annectant gyrus;caudate nucleus;cerebellum;entorhinal cortex;inferior occipital gyrus;inferior temporal gyrus;insular cortex;postcentral gyrus;posterior parahippocampal gyrus;precentral gyrus;subiculum;superior colliculus
chr1 16513221 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 7 7 amygdala;annectant gyrus;insular cortex;midbrain;occipital gyrus;posterior cingulate gyrus;superior colliculus
chr1 16513332 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 24 22 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;cerebellum;cuneus;geniculate nucleus;inferior frontal gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;superior colliculus;superior frontal gyrus;superior temporal gyrus;supramarginal gyrus
chr1 16513384 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 37 28 angular gyrus;annectant gyrus;caudate nucleus;cerebellum;claustrum;cuneus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;supramarginal gyrus
chr1 16513397 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 22 17 angular gyrus;annectant gyrus;cerebellum;claustrum;cuneus;inferior temporal gyrus;medulla;middle frontal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;precentral gyrus;spinal cord dorsal;superior colliculus;superior parietal lobule;supramarginal gyrus
chr1 16513411 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 7 7 claustrum;globus pallidus;occipital gyrus;postcentral gyrus;posterior cingulate gyrus;precentral gyrus;superior parietal lobule
chr1 16513474 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 globus pallidus;inferior temporal gyrus;middle temporal gyrus
chr1 16515479 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 posterior cingulate gyrus;subiculum
chr1 16515485 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 postcentral gyrus;posterior cingulate gyrus
chr1 16515549 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 cerebellum;superior frontal gyrus;supramarginal gyrus
chr1 16515563 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 21 18 caudate nucleus;cerebellum;cuneus;entorhinal cortex;inferior frontal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;supramarginal gyrus
chr1 16515576 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 cerebellum;inferior frontal gyrus;middle temporal gyrus;posterior hippocampus;superior parietal lobule