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chr1 16515601 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 cuneus;dentate gyrus;posterior hypothalamus
chr1 16515612 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 39 28 amygdala;angular gyrus;annectant gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;straight gyrus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16515628 A G REP LINE/L1 ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 globus pallidus;inferior frontal gyrus
chr1 16517289 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 inferior frontal gyrus;precentral gyrus
chr1 16517293 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 8 8 entorhinal cortex;geniculate nucleus;lateral occipitotemporal gyrus;postcentral gyrus;precentral gyrus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16517302 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 46 34 amygdala;angular gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;claustrum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16517328 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 annectant gyrus;inferior occipital gyrus;posterior hypothalamus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16517364 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 11 10 annectant gyrus;anterior cingulate gyrus;caudate nucleus;insular cortex;lateral occipitotemporal gyrus;orbital gyrus;septum;superior colliculus;superior temporal gyrus;supramarginal gyrus
chr1 16517388 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 13 13 annectant gyrus;anterior hippocampus;caudate nucleus;entorhinal cortex;geniculate nucleus;lateral occipitotemporal gyrus;occipital gyrus;orbital gyrus;posterior hippocampus;precentral gyrus;septum;straight gyrus;superior parietal lobule
chr1 16517391 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 10 10 angular gyrus;anterior hippocampus;entorhinal cortex;geniculate nucleus;orbital gyrus;posterior cingulate gyrus;posterior hippocampus;precentral gyrus;septum;superior parietal lobule
chr1 16521762 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 globus pallidus;lateral occipitotemporal gyrus;supramarginal gyrus
chr1 16521765 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 angular gyrus;inferior temporal gyrus;posterior parahippocampal gyrus;straight gyrus;subiculum
chr1 16521780 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 anterior cingulate gyrus;superior temporal gyrus;supramarginal gyrus
chr1 16521794 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 26 22 amygdala;anterior cingulate gyrus;anterior hippocampus;claustrum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;posterior hippocampus;posterior parahippocampal gyrus;septum;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16521828 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 lateral occipitotemporal gyrus;middle temporal gyrus;orbital gyrus;supramarginal gyrus
chr1 16521830 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 12 10 amygdala;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;posterior hippocampus;septum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16521842 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 orbital gyrus;superior parietal lobule
chr1 16521843 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 47 32 amygdala;annectant gyrus;anterior hippocampus;caudate nucleus;claustrum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;septum;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16521856 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 angular gyrus;inferior occipital gyrus;posterior hippocampus
chr1 16521862 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 30 23 amygdala;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;cuneus;dentate gyrus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 16521866 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 16 13 inferior frontal gyrus;inferior temporal gyrus;insular cortex;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;precentral gyrus;superior frontal gyrus;superior temporal gyrus;supramarginal gyrus
chr1 16521867 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 30 25 amygdala;angular gyrus;anterior cingulate gyrus;caudate nucleus;claustrum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;putamen;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16521875 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 amygdala;inferior frontal gyrus;middle frontal gyrus;posterior parahippocampal gyrus;superior frontal gyrus
chr1 16521881 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 34 25 amygdala;annectant gyrus;caudate nucleus;cerebellum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16521884 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 32 24 amygdala;caudate nucleus;cuneus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;septum;spinal cord dorsal;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16521890 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 7 7 amygdala;middle frontal gyrus;middle temporal gyrus;posterior parahippocampal gyrus;septum;superior temporal gyrus;supramarginal gyrus
chr1 16521899 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 4 annectant gyrus;middle temporal gyrus;occipital gyrus;straight gyrus
chr1 16521911 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 21 16 amygdala;anterior cingulate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;posterior parahippocampal gyrus;septum;superior temporal gyrus;supramarginal gyrus
chr1 16521932 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 middle temporal gyrus;superior frontal gyrus
chr1 16521937 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 32 25 amygdala;annectant gyrus;anterior cingulate gyrus;caudate nucleus;cerebellum;entorhinal cortex;globus pallidus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;posterior parahippocampal gyrus;precentral gyrus;septum;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;supramarginal gyrus;thalamus
chr1 16521938 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 54 37 amygdala;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16521939 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 24 21 amygdala;annectant gyrus;anterior cingulate gyrus;cerebellum;entorhinal cortex;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior parahippocampal gyrus;precentral gyrus;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16521955 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 64 41 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16521964 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 inferior occipital gyrus;insular cortex;orbital gyrus;postcentral gyrus;posterior parahippocampal gyrus
chr1 16521972 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 anterior cingulate gyrus;cuneus;insular cortex;lateral occipitotemporal gyrus;subiculum
chr1 16521977 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 38 30 amygdala;annectant gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;cuneus;dentate gyrus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16521979 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 10 10 amygdala;cerebellum;insular cortex;lateral occipitotemporal gyrus;occipital gyrus;orbital gyrus;precentral gyrus;subiculum;superior parietal lobule;superior temporal gyrus
chr1 16521983 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 insular cortex;middle temporal gyrus;straight gyrus;superior parietal lobule
chr1 16521999 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 orbital gyrus;posterior parahippocampal gyrus
chr1 16522923 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 putamen;septum
chr1 16522929 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 9 8 anterior cingulate gyrus;cuneus;geniculate nucleus;inferior occipital gyrus;midbrain;septum;superior parietal lobule;supramarginal gyrus
chr1 16522943 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 28 22 amygdala;anterior cingulate gyrus;caudate nucleus;cerebellum;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;orbital gyrus;postcentral gyrus;posterior parahippocampal gyrus;precentral gyrus;septum;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16522987 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 inferior temporal gyrus;middle temporal gyrus;occipital gyrus;precentral gyrus
chr1 16523005 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 anterior cingulate gyrus;inferior temporal gyrus
chr1 16523054 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 29 23 anterior cingulate gyrus;cerebellum;claustrum;entorhinal cortex;geniculate nucleus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;occipital gyrus;pons;postcentral gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus;thalamus
chr1 16523090 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 anterior cingulate gyrus;entorhinal cortex;middle frontal gyrus
chr1 16523107 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 7 6 annectant gyrus;entorhinal cortex;lateral occipitotemporal gyrus;orbital gyrus;postcentral gyrus;supramarginal gyrus
chr1 16523116 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 17 17 annectant gyrus;anterior hypothalamus;caudate nucleus;cuneus;entorhinal cortex;inferior occipital gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;septum;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16523122 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 superior temporal gyrus;supramarginal gyrus
chr1 16523126 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 38 36 angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;septum;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16523146 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 10 10 cerebellum;claustrum;inferior frontal gyrus;inferior occipital gyrus;lateral occipitotemporal gyrus;medulla;middle temporal gyrus;occipital gyrus;posterior hypothalamus;supramarginal gyrus
chr1 16523150 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 13 13 claustrum;cuneus;inferior occipital gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;septum;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16523151 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 29 29 angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;entorhinal cortex;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;medulla;midbrain;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16526027 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 39 30 amygdala;annectant gyrus;anterior cingulate gyrus;caudate nucleus;cerebellum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;precentral gyrus;putamen;spinal cord dorsal;straight gyrus;superior colliculus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16526028 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 annectant gyrus;inferior temporal gyrus;insular cortex;medulla;supramarginal gyrus
chr1 16526034 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 26 20 amygdala;anterior cingulate gyrus;cerebellum;dentate gyrus;globus pallidus;inferior temporal gyrus;insular cortex;middle frontal gyrus;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior hypothalamus;posterior parahippocampal gyrus;straight gyrus;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16526055 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 angular gyrus;orbital gyrus;precentral gyrus;superior parietal lobule;superior temporal gyrus
chr1 16526056 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 13 13 inferior occipital gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;straight gyrus;superior colliculus;superior temporal gyrus;supramarginal gyrus
chr1 16526081 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 angular gyrus;middle frontal gyrus;posterior hippocampus;posterior parahippocampal gyrus;straight gyrus
chr1 16526088 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 4 amygdala;insular cortex;middle frontal gyrus;subiculum
chr1 16526089 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 annectant gyrus;anterior hippocampus;insular cortex
chr1 16526091 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 18 14 cerebellum;globus pallidus;inferior frontal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;precentral gyrus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16526120 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 cerebellum;claustrum;middle temporal gyrus;orbital gyrus;superior temporal gyrus
chr1 16526146 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 31 23 amygdala;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;cuneus;geniculate nucleus;inferior occipital gyrus;inferior temporal gyrus;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16526151 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 7 7 cerebellum;geniculate nucleus;inferior temporal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;orbital gyrus;straight gyrus
chr1 16526172 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 cuneus;inferior frontal gyrus;lateral occipitotemporal gyrus;occipital gyrus;subiculum;superior frontal gyrus
chr1 16526178 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 40 28 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;caudate nucleus;cerebellum;cuneus;entorhinal cortex;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior parahippocampal gyrus;precentral gyrus;septum;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16526187 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 cerebellum;inferior frontal gyrus;inferior occipital gyrus;straight gyrus;subiculum;superior parietal lobule
chr1 16526191 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 57 37 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16526207 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 7 7 anterior cingulate gyrus;cerebellum;cuneus;precentral gyrus;straight gyrus;superior parietal lobule;superior temporal gyrus
chr1 16526211 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 18 15 annectant gyrus;anterior cingulate gyrus;cerebellum;cuneus;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;occipital gyrus;precentral gyrus;putamen;straight gyrus;supramarginal gyrus
chr1 16526223 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 49 34 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;caudate nucleus;cerebellum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16526226 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 anterior cingulate gyrus;inferior occipital gyrus;middle temporal gyrus;posterior cingulate gyrus
chr1 16526236 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 29 24 amygdala;angular gyrus;anterior cingulate gyrus;cerebellum;cuneus;dentate gyrus;globus pallidus;inferior occipital gyrus;inferior temporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;precentral gyrus;septum;superior colliculus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16527136 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 10 10 amygdala;anterior cingulate gyrus;inferior frontal gyrus;middle frontal gyrus;orbital gyrus;postcentral gyrus;precentral gyrus;septum;subiculum;superior parietal lobule
chr1 16527149 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 17 17 amygdala;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;cerebellum;globus pallidus;inferior occipital gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;orbital gyrus;pons;posterior parahippocampal gyrus;precentral gyrus;septum;subiculum;superior parietal lobule;supramarginal gyrus
chr1 16527175 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 amygdala;inferior frontal gyrus;posterior parahippocampal gyrus;spinal cord dorsal
chr1 16527200 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 lateral occipitotemporal gyrus;septum;subiculum
chr1 16527209 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 33 27 amygdala;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;occipital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;septum;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus
chr1 16527214 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 geniculate nucleus;precentral gyrus
chr1 16527240 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 postcentral gyrus;substantia nigra
chr1 16527258 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 3 cerebellum;inferior temporal gyrus;superior temporal gyrus
chr1 16527261 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 16 13 annectant gyrus;cerebellum;cuneus;entorhinal cortex;inferior frontal gyrus;inferior temporal gyrus;insular cortex;orbital gyrus;posterior parahippocampal gyrus;putamen;straight gyrus;subiculum;superior parietal lobule
chr1 16527312 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 12 11 anterior hypothalamus;claustrum;entorhinal cortex;geniculate nucleus;insular cortex;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior colliculus
chr1 16527330 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 45 34 amygdala;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16527352 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 43 33 amygdala;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 16527358 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 48 36 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;entorhinal cortex;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;posterior cingulate gyrus;posterior hippocampus;precentral gyrus;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;supramarginal gyrus;thalamus
chr1 16539458 A G REP LTR/ERVL-MaLR ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 2 2 insular cortex;occipital gyrus
chr1 16546662 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 amygdala;caudate nucleus;orbital gyrus
chr1 16546666 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 amygdala;anterior hypothalamus;caudate nucleus;middle temporal gyrus;septum
chr1 16546727 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 inferior frontal gyrus;superior frontal gyrus;superior parietal lobule
chr1 16546741 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 9 8 angular gyrus;caudate nucleus;claustrum;geniculate nucleus;inferior temporal gyrus;insular cortex;middle frontal gyrus;orbital gyrus
chr1 16546880 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 5 5 cuneus;geniculate nucleus;spinal cord ventral;superior parietal lobule;supramarginal gyrus
chr1 16546894 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 28 23 angular gyrus;annectant gyrus;anterior cingulate gyrus;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior occipital gyrus;insular cortex;lateral occipitotemporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior parahippocampal gyrus;putamen;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16546904 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 10 10 angular gyrus;annectant gyrus;cerebellum;dentate gyrus;entorhinal cortex;inferior temporal gyrus;lateral occipitotemporal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16547714 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 inferior occipital gyrus;posterior parahippocampal gyrus;superior temporal gyrus
chr1 16547715 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 4 4 cuneus;middle temporal gyrus;posterior parahippocampal gyrus;subiculum
chr1 16547725 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 6 6 annectant gyrus;lateral occipitotemporal gyrus;middle temporal gyrus;subiculum;superior temporal gyrus;supramarginal gyrus
chr1 16547774 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 27 21 amygdala;annectant gyrus;anterior hippocampus;cuneus;dentate gyrus;geniculate nucleus;inferior occipital gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior parahippocampal gyrus;precentral gyrus;straight gyrus;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 16547794 A G ALU SINE/Alu ENSMFAG00000034561:PCNX2 PCNX2 Intronic - - 3 3 cuneus;dentate gyrus;geniculate nucleus