query
string
answer
string
doc_name
string
evidence_page
list
bbox
list
subimg_tpye
list
category
string
image_paths
list
question
string
images
list
Which model variant shows the highest ΔΔG Pearson correlation?
Dual-head disabled
2509.22950
[ 8, 11 ]
[ [ [ 554, 1421, 1988, 2420 ] ], [ [ 701, 651, 1841, 1040 ] ] ]
[ [ "text" ], [ "table" ] ]
q-bio
[ "q-bio/2509.22950/2509.22950_8.png", "q-bio/2509.22950/2509.22950_11.png" ]
Which model variant shows the highest ΔΔG Pearson correlation?
[ "q-bio/2509.22950/2509.22950_8.png", "q-bio/2509.22950/2509.22950_11.png" ]
Which SV caller has the highest number of SVs in the 'Other' category?
Truth
2509.23057
[ 3, 2 ]
[ [ [ 1505, 276, 2251, 1453 ] ], [ [ 1275, 848, 2255, 1628 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23057/2509.23057_3.png", "q-bio/2509.23057/2509.23057_2.png" ]
Which SV caller has the highest number of SVs in the 'Other' category?
[ "q-bio/2509.23057/2509.23057_3.png", "q-bio/2509.23057/2509.23057_2.png" ]
What is the exact SV length shown in the figure's top panel?
897 bp
2509.23057
[ 1, 3 ]
[ [ [ 225, 2260, 1206, 3079 ] ], [ [ 1505, 276, 2251, 1453 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23057/2509.23057_1.png", "q-bio/2509.23057/2509.23057_3.png" ]
What is the exact SV length shown in the figure's top panel?
[ "q-bio/2509.23057/2509.23057_1.png", "q-bio/2509.23057/2509.23057_3.png" ]
Which tool has the highest number of SVs in confident regions in Figure 1B?
SVIM
2509.23057
[ 5, 2 ]
[ [ [ 229, 283, 1205, 764 ] ], [ [ 1275, 848, 2255, 1628 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23057/2509.23057_5.png", "q-bio/2509.23057/2509.23057_2.png" ]
Which tool has the highest number of SVs in confident regions in Figure 1B?
[ "q-bio/2509.23057/2509.23057_5.png", "q-bio/2509.23057/2509.23057_2.png" ]
Which reference in the bibliography is related to synthetic-diploid benchmark?
Li H, Bloom JM, Farjoun Y, et al.
2509.23057
[ 5, 3 ]
[ [ [ 229, 283, 1205, 764 ] ], [ [ 1505, 276, 2251, 1453 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23057/2509.23057_5.png", "q-bio/2509.23057/2509.23057_3.png" ]
Which reference in the bibliography is related to synthetic-diploid benchmark?
[ "q-bio/2509.23057/2509.23057_5.png", "q-bio/2509.23057/2509.23057_3.png" ]
Which baseline rate in Figure S4 shows the highest total harm at 0.25?
Activation / proliferation g0,N→N* = g0,E→2E
2509.22997
[ 5, 33 ]
[ [ [ 1528, 253, 2198, 901 ] ], [ [ 10, 1511, 2541, 3300 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.22997/2509.22997_5.png", "q-bio/2509.22997/2509.22997_33.png" ]
Which baseline rate in Figure S4 shows the highest total harm at 0.25?
[ "q-bio/2509.22997/2509.22997_5.png", "q-bio/2509.22997/2509.22997_33.png" ]
Which sensitivity parameter shows a peak at R0=1 in the bottom right panel?
Response-harm sensitivity ψ_res.
2509.22997
[ 5, 38 ]
[ [ [ 1528, 253, 2198, 901 ] ], [ [ 214, 2454, 2349, 2987 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.22997/2509.22997_5.png", "q-bio/2509.22997/2509.22997_38.png" ]
Which sensitivity parameter shows a peak at R0=1 in the bottom right panel?
[ "q-bio/2509.22997/2509.22997_5.png", "q-bio/2509.22997/2509.22997_38.png" ]
In Figure S10C, which signal sensitivity parameter ψ shows the highest clearance response at low antigenicity?
ψ_res
2509.22997
[ 3, 39 ]
[ [ [ 214, 804, 2350, 1889 ] ], [ [ 12, 0, 2530, 1155 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.22997/2509.22997_3.png", "q-bio/2509.22997/2509.22997_39.png" ]
In Figure S10C, which signal sensitivity parameter ψ shows the highest clearance response at low antigenicity?
[ "q-bio/2509.22997/2509.22997_3.png", "q-bio/2509.22997/2509.22997_39.png" ]
Which parameter shows the highest harm reduction at κ=100 in Figure 6D?
ψ_res
2509.22997
[ 10, 38 ]
[ [ [ 218, 815, 2349, 2016 ] ], [ [ 214, 2454, 2349, 2987 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.22997/2509.22997_10.png", "q-bio/2509.22997/2509.22997_38.png" ]
Which parameter shows the highest harm reduction at κ=100 in Figure 6D?
[ "q-bio/2509.22997/2509.22997_10.png", "q-bio/2509.22997/2509.22997_38.png" ]
What specific challenge is mentioned under 'Diverse graph database systems'?
Need accepted standards for graph metadata.
2509.22424
[ 7, 8 ]
[ [ [ 301, 403, 2246, 1904 ] ], [ [ 303, 522, 2245, 1783 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.22424/2509.22424_7.png", "q-bio/2509.22424/2509.22424_8.png" ]
What specific challenge is mentioned under 'Diverse graph database systems'?
[ "q-bio/2509.22424/2509.22424_7.png", "q-bio/2509.22424/2509.22424_8.png" ]
What specific challenge is mentioned regarding graph database systems?
Need accepted standards for graph metadata.
2509.22424
[ 7, 2 ]
[ [ [ 301, 403, 2246, 1904 ] ], [ [ 1341, 2073, 2318, 2986 ] ] ]
[ [ "image" ], [ "text" ] ]
q-bio
[ "q-bio/2509.22424/2509.22424_7.png", "q-bio/2509.22424/2509.22424_2.png" ]
What specific challenge is mentioned regarding graph database systems?
[ "q-bio/2509.22424/2509.22424_7.png", "q-bio/2509.22424/2509.22424_2.png" ]
Which node in the graph is directly connected to 'LLM hallucinations'?
LLM-assisted curation
2509.22424
[ 8, 5 ]
[ [ [ 303, 522, 2245, 1783 ] ], [ [ 1282, 339, 2263, 1063 ] ] ]
[ [ "image" ], [ "text" ] ]
q-bio
[ "q-bio/2509.22424/2509.22424_8.png", "q-bio/2509.22424/2509.22424_5.png" ]
Which node in the graph is directly connected to 'LLM hallucinations'?
[ "q-bio/2509.22424/2509.22424_8.png", "q-bio/2509.22424/2509.22424_5.png" ]
Which node in the graph connects 'LLM outputs' and 'LLM hallucinations'?
LLM-assisted curation
2509.22424
[ 1, 8 ]
[ [ [ 253, 1746, 1938, 2494 ] ], [ [ 303, 522, 2245, 1783 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.22424/2509.22424_1.png", "q-bio/2509.22424/2509.22424_8.png" ]
Which node in the graph connects 'LLM outputs' and 'LLM hallucinations'?
[ "q-bio/2509.22424/2509.22424_1.png", "q-bio/2509.22424/2509.22424_8.png" ]
Which condition shows a significant difference at 0 ms in the second figure?
Neither, significant differences are not marked at 0 ms.
2509.23195
[ 6, 11 ]
[ [ [ 816, 1089, 1796, 1763 ] ], [ [ 363, 1667, 1526, 2505 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23195/2509.23195_6.png", "q-bio/2509.23195/2509.23195_11.png" ]
Which condition shows a significant difference at 0 ms in the second figure?
[ "q-bio/2509.23195/2509.23195_6.png", "q-bio/2509.23195/2509.23195_11.png" ]
What is the correlation between maximum depth and edit distance?
r = .67
2509.23195
[ 7, 6 ]
[ [ [ 10, 2648, 2542, 3300 ] ], [ [ 816, 1089, 1796, 1763 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23195/2509.23195_7.png", "q-bio/2509.23195/2509.23195_6.png" ]
What is the correlation between maximum depth and edit distance?
[ "q-bio/2509.23195/2509.23195_7.png", "q-bio/2509.23195/2509.23195_6.png" ]
What is the edge strength value for maximum depth's influence?
80.45
2509.23195
[ 8, 11 ]
[ [ [ 285, 311, 2237, 1026 ] ], [ [ 363, 1667, 1526, 2505 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23195/2509.23195_8.png", "q-bio/2509.23195/2509.23195_11.png" ]
What is the edge strength value for maximum depth's influence?
[ "q-bio/2509.23195/2509.23195_8.png", "q-bio/2509.23195/2509.23195_11.png" ]
What is the time range of the shaded region in the top graph?
0 to 200 ms.
2509.23195
[ 1, 11 ]
[ [ [ 303, 2005, 2209, 2968 ] ], [ [ 363, 1667, 1526, 2505 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23195/2509.23195_1.png", "q-bio/2509.23195/2509.23195_11.png" ]
What is the time range of the shaded region in the top graph?
[ "q-bio/2509.23195/2509.23195_1.png", "q-bio/2509.23195/2509.23195_11.png" ]
In Figure C.3, which layer shows the highest decoding accuracy in unbiased conditions with full FB21?
Layer 1 (L1, 1.0)
2509.23104
[ 9, 15 ]
[ [ [ 446, 946, 2104, 1543 ] ], [ [ 444, 2257, 2106, 2985 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23104/2509.23104_9.png", "q-bio/2509.23104/2509.23104_15.png" ]
In Figure C.3, which layer shows the highest decoding accuracy in unbiased conditions with full FB21?
[ "q-bio/2509.23104/2509.23104_9.png", "q-bio/2509.23104/2509.23104_15.png" ]
Which layer's decoding accuracy is highest in Figure C.3D for reduced FB21?
Layer 1 (L1, 0.7)
2509.23104
[ 15, 6 ]
[ [ [ 444, 2257, 2106, 2985 ] ], [ [ 447, 1860, 2106, 2424 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23104/2509.23104_15.png", "q-bio/2509.23104/2509.23104_6.png" ]
Which layer's decoding accuracy is highest in Figure C.3D for reduced FB21?
[ "q-bio/2509.23104/2509.23104_15.png", "q-bio/2509.23104/2509.23104_6.png" ]
Which figure shows PCA trajectories with reduced feedback from layer 3 to 2?
Figure 5G
2509.23104
[ 9, 6 ]
[ [ [ 446, 946, 2104, 1543 ] ], [ [ 447, 1860, 2106, 2424 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23104/2509.23104_9.png", "q-bio/2509.23104/2509.23104_6.png" ]
Which figure shows PCA trajectories with reduced feedback from layer 3 to 2?
[ "q-bio/2509.23104/2509.23104_9.png", "q-bio/2509.23104/2509.23104_6.png" ]
Which feedback condition shows reduced bias in Figure 3B compared to 3A?
Reduced feedback from layer 3 to 2.
2509.23104
[ 10, 6 ]
[ [ [ 449, 368, 2101, 847 ] ], [ [ 447, 1860, 2106, 2424 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23104/2509.23104_10.png", "q-bio/2509.23104/2509.23104_6.png" ]
Which feedback condition shows reduced bias in Figure 3B compared to 3A?
[ "q-bio/2509.23104/2509.23104_10.png", "q-bio/2509.23104/2509.23104_6.png" ]
Which fold has the highest average length for Ag in validation set?
Fold 1
2509.23254
[ 16, 24 ]
[ [ [ 309, 159, 2025, 1134 ] ], [ [ 417, 482, 1335, 1129 ] ] ]
[ [ "table" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23254/2509.23254_16.png", "q-bio/2509.23254/2509.23254_24.png" ]
Which fold has the highest average length for Ag in validation set?
[ "q-bio/2509.23254/2509.23254_16.png", "q-bio/2509.23254/2509.23254_24.png" ]
Which fold has the highest ROC-AUC for Ag in the ROC curve?
Fold 0 (AUC=0.913)
2509.23254
[ 18, 21 ]
[ [ [ 1713, 351, 2223, 1452 ] ], [ [ 470, 472, 2080, 2996 ] ] ]
[ [ "image" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23254/2509.23254_18.png", "q-bio/2509.23254/2509.23254_21.png" ]
Which fold has the highest ROC-AUC for Ag in the ROC curve?
[ "q-bio/2509.23254/2509.23254_18.png", "q-bio/2509.23254/2509.23254_21.png" ]
Which 'step' value shows the highest median Precision in the top figure?
step=4
2509.23254
[ 7, 19 ]
[ [ [ 405, 359, 1257, 1684 ] ], [ [ 439, 1305, 1236, 1943 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23254/2509.23254_7.png", "q-bio/2509.23254/2509.23254_19.png" ]
Which 'step' value shows the highest median Precision in the top figure?
[ "q-bio/2509.23254/2509.23254_7.png", "q-bio/2509.23254/2509.23254_19.png" ]
Which fold has the highest average length for Ag in validation set?
Fold 1
2509.23254
[ 16, 23 ]
[ [ [ 309, 159, 2025, 1134 ] ], [ [ 472, 313, 2077, 1109 ] ] ]
[ [ "table" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23254/2509.23254_16.png", "q-bio/2509.23254/2509.23254_23.png" ]
Which fold has the highest average length for Ag in validation set?
[ "q-bio/2509.23254/2509.23254_16.png", "q-bio/2509.23254/2509.23254_23.png" ]
Which model in Figure 2A shows the highest median adversarial sensitivity?
VGG16
2509.23333
[ 5, 8 ]
[ [ [ 447, 544, 2107, 1698 ] ], [ [ 447, 1165, 2107, 2098 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23333/2509.23333_5.png", "q-bio/2509.23333/2509.23333_8.png" ]
Which model in Figure 2A shows the highest median adversarial sensitivity?
[ "q-bio/2509.23333/2509.23333_5.png", "q-bio/2509.23333/2509.23333_8.png" ]
Which model in Figure 2A shows the lowest adversarial sensitivity at ϵ=5?
ResNet-50 robust
2509.23333
[ 2, 5 ]
[ [ [ 440, 1064, 2108, 1906 ] ], [ [ 447, 544, 2107, 1698 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23333/2509.23333_2.png", "q-bio/2509.23333/2509.23333_5.png" ]
Which model in Figure 2A shows the lowest adversarial sensitivity at ϵ=5?
[ "q-bio/2509.23333/2509.23333_2.png", "q-bio/2509.23333/2509.23333_5.png" ]
Which model shows the most stable response to perturbations in FFA?
Robust ResNet-50 8
2509.23333
[ 2, 16 ]
[ [ [ 440, 1064, 2108, 1906 ] ], [ [ 483, 609, 1280, 1167 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23333/2509.23333_2.png", "q-bio/2509.23333/2509.23333_16.png" ]
Which model shows the most stable response to perturbations in FFA?
[ "q-bio/2509.23333/2509.23333_2.png", "q-bio/2509.23333/2509.23333_16.png" ]
Which brain region's adversarial probe shifts most dramatically in Figure 1B?
EBA
2509.23333
[ 2, 8 ]
[ [ [ 440, 1064, 2108, 1906 ] ], [ [ 447, 1165, 2107, 2098 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23333/2509.23333_2.png", "q-bio/2509.23333/2509.23333_8.png" ]
Which brain region's adversarial probe shifts most dramatically in Figure 1B?
[ "q-bio/2509.23333/2509.23333_2.png", "q-bio/2509.23333/2509.23333_8.png" ]
For L=30, what is the sign of M according to the first graph?
Negative
2509.23397
[ 14, 12 ]
[ [ [ 470, 374, 2010, 1554 ] ], [ [ 360, 296, 1143, 880 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23397/2509.23397_14.png", "q-bio/2509.23397/2509.23397_12.png" ]
For L=30, what is the sign of M according to the first graph?
[ "q-bio/2509.23397/2509.23397_14.png", "q-bio/2509.23397/2509.23397_12.png" ]
At what α value do 500 and 2000 traps converge in the first graph?
α = 0.2
2509.23397
[ 5, 12 ]
[ [ [ 764, 326, 1744, 896 ] ], [ [ 360, 296, 1143, 880 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23397/2509.23397_5.png", "q-bio/2509.23397/2509.23397_12.png" ]
At what α value do 500 and 2000 traps converge in the first graph?
[ "q-bio/2509.23397/2509.23397_5.png", "q-bio/2509.23397/2509.23397_12.png" ]
At which L value does M first become negative in the second figure?
L = 30
2509.23397
[ 5, 14 ]
[ [ [ 764, 326, 1744, 896 ] ], [ [ 470, 374, 2010, 1554 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23397/2509.23397_5.png", "q-bio/2509.23397/2509.23397_14.png" ]
At which L value does M first become negative in the second figure?
[ "q-bio/2509.23397/2509.23397_5.png", "q-bio/2509.23397/2509.23397_14.png" ]
What is the average lifespan of traps for blue and green curves?
500 days.
2509.23397
[ 15, 12 ]
[ [ [ 409, 853, 2074, 1303 ] ], [ [ 360, 296, 1143, 880 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23397/2509.23397_15.png", "q-bio/2509.23397/2509.23397_12.png" ]
What is the average lifespan of traps for blue and green curves?
[ "q-bio/2509.23397/2509.23397_15.png", "q-bio/2509.23397/2509.23397_12.png" ]
Which chapter explains the reduction of verbal thoughts in mindful states?
Chapter 3: Silence
2509.23342
[ 3, 5 ]
[ [ [ 294, 291, 2128, 655 ] ], [ [ 300, 1895, 2219, 3193 ] ] ]
[ [ "text" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23342/2509.23342_3.png", "q-bio/2509.23342/2509.23342_5.png" ]
Which chapter explains the reduction of verbal thoughts in mindful states?
[ "q-bio/2509.23342/2509.23342_3.png", "q-bio/2509.23342/2509.23342_5.png" ]
What does Chapter 3 suggest about verbal thoughts in a mindful state?
They can be observed without triggering self-patterns.
2509.23342
[ 5, 2 ]
[ [ [ 300, 1895, 2219, 3193 ] ], [ [ 301, 1624, 2172, 2105 ] ] ]
[ [ "table" ], [ "text" ] ]
q-bio
[ "q-bio/2509.23342/2509.23342_5.png", "q-bio/2509.23342/2509.23342_2.png" ]
What does Chapter 3 suggest about verbal thoughts in a mindful state?
[ "q-bio/2509.23342/2509.23342_5.png", "q-bio/2509.23342/2509.23342_2.png" ]
What is the consequence of matching mindful patterns according to the text?
Finer, more detailed experiencing of feelings.
2509.23342
[ 9, 5 ]
[ [ [ 301, 2525, 2154, 2973 ] ], [ [ 300, 1895, 2219, 3193 ] ] ]
[ [ "text" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23342/2509.23342_9.png", "q-bio/2509.23342/2509.23342_5.png" ]
What is the consequence of matching mindful patterns according to the text?
[ "q-bio/2509.23342/2509.23342_9.png", "q-bio/2509.23342/2509.23342_5.png" ]
Which chapter explains the reduction of verbal thoughts leading to silence?
3: Silence
2509.23342
[ 6, 5 ]
[ [ [ 298, 293, 2225, 2768 ] ], [ [ 300, 1895, 2219, 3193 ] ] ]
[ [ "text" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23342/2509.23342_6.png", "q-bio/2509.23342/2509.23342_5.png" ]
Which chapter explains the reduction of verbal thoughts leading to silence?
[ "q-bio/2509.23342/2509.23342_6.png", "q-bio/2509.23342/2509.23342_5.png" ]
What is the KNN-5 Decoder Accuracy for the Pseudocut control dataset?
1.0
2509.23479
[ 3, 6 ]
[ [ [ 553, 2360, 2027, 2695 ] ], [ [ 449, 1086, 2086, 1709 ] ] ]
[ [ "image" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23479/2509.23479_3.png", "q-bio/2509.23479/2509.23479_6.png" ]
What is the KNN-5 Decoder Accuracy for the Pseudocut control dataset?
[ "q-bio/2509.23479/2509.23479_3.png", "q-bio/2509.23479/2509.23479_6.png" ]
What is the difference in KNN-5 Decoder Accuracy between V3 and V4 for normal data?
0.002
2509.23479
[ 5, 6 ]
[ [ [ 451, 1281, 1840, 1991 ] ], [ [ 449, 1086, 2086, 1709 ] ] ]
[ [ "table" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23479/2509.23479_5.png", "q-bio/2509.23479/2509.23479_6.png" ]
What is the difference in KNN-5 Decoder Accuracy between V3 and V4 for normal data?
[ "q-bio/2509.23479/2509.23479_5.png", "q-bio/2509.23479/2509.23479_6.png" ]
What is the KNN-5 Decoder Accuracy for the Pseudocut control dataset?
0.99
2509.23479
[ 3, 5 ]
[ [ [ 553, 2360, 2027, 2695 ] ], [ [ 451, 1281, 1840, 1991 ] ] ]
[ [ "image" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23479/2509.23479_3.png", "q-bio/2509.23479/2509.23479_5.png" ]
What is the KNN-5 Decoder Accuracy for the Pseudocut control dataset?
[ "q-bio/2509.23479/2509.23479_3.png", "q-bio/2509.23479/2509.23479_5.png" ]
What is the KNN-5 Decoder Accuracy for the Pseudocut control dataset?
1.0
2509.23479
[ 4, 6 ]
[ [ [ 441, 307, 2109, 1401 ] ], [ [ 449, 1086, 2086, 1709 ] ] ]
[ [ "image" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23479/2509.23479_4.png", "q-bio/2509.23479/2509.23479_6.png" ]
What is the KNN-5 Decoder Accuracy for the Pseudocut control dataset?
[ "q-bio/2509.23479/2509.23479_4.png", "q-bio/2509.23479/2509.23479_6.png" ]
What is the hypothesized mechanism for PduQ inhibition shown in Figure 2B?
PduQ-oxidized
2509.23445
[ 5, 3 ]
[ [ [ 826, 1501, 2418, 2607 ] ], [ [ 831, 417, 1863, 1374 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23445/2509.23445_5.png", "q-bio/2509.23445/2509.23445_3.png" ]
What is the hypothesized mechanism for PduQ inhibition shown in Figure 2B?
[ "q-bio/2509.23445/2509.23445_5.png", "q-bio/2509.23445/2509.23445_3.png" ]
What is the permeability range of MCPs as stated in the text?
10^-11 - 10^-3 m/s
2509.23445
[ 9, 3 ]
[ [ [ 826, 1833, 2401, 2318 ] ], [ [ 831, 417, 1863, 1374 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23445/2509.23445_9.png", "q-bio/2509.23445/2509.23445_3.png" ]
What is the permeability range of MCPs as stated in the text?
[ "q-bio/2509.23445/2509.23445_9.png", "q-bio/2509.23445/2509.23445_3.png" ]
What is the permeability range for propionaldehyde in the MCPs?
Greater than 10^-8 m/s.
2509.23445
[ 1, 3 ]
[ [ [ 826, 834, 2394, 2885 ] ], [ [ 831, 417, 1863, 1374 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23445/2509.23445_1.png", "q-bio/2509.23445/2509.23445_3.png" ]
What is the permeability range for propionaldehyde in the MCPs?
[ "q-bio/2509.23445/2509.23445_1.png", "q-bio/2509.23445/2509.23445_3.png" ]
What is the permeability of propionaldehyde in Mode 1 compared to Mode 2?
Mode 1: 10^-6.3 m/s, Mode 2: 10^-5.2 m/s.
2509.23445
[ 13, 3 ]
[ [ [ 823, 2267, 2391, 2859 ] ], [ [ 831, 417, 1863, 1374 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23445/2509.23445_13.png", "q-bio/2509.23445/2509.23445_3.png" ]
What is the permeability of propionaldehyde in Mode 1 compared to Mode 2?
[ "q-bio/2509.23445/2509.23445_13.png", "q-bio/2509.23445/2509.23445_3.png" ]
Which cluster in the UMAP plot has the highest F1 Score?
Cluster35_Novel
2509.23543
[ 7, 6 ]
[ [ [ 1007, 1138, 2205, 1587 ] ], [ [ 621, 2612, 1930, 2936 ] ] ]
[ [ "image" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23543/2509.23543_7.png", "q-bio/2509.23543/2509.23543_6.png" ]
Which cluster in the UMAP plot has the highest F1 Score?
[ "q-bio/2509.23543/2509.23543_7.png", "q-bio/2509.23543/2509.23543_6.png" ]
Which cluster in the right UMAP plot has the highest UMAP2 value?
Cluster28_FmidiOFF
2509.23543
[ 5, 6 ]
[ [ [ 334, 1161, 1555, 1644 ] ], [ [ 621, 2612, 1930, 2936 ] ] ]
[ [ "image" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23543/2509.23543_5.png", "q-bio/2509.23543/2509.23543_6.png" ]
Which cluster in the right UMAP plot has the highest UMAP2 value?
[ "q-bio/2509.23543/2509.23543_5.png", "q-bio/2509.23543/2509.23543_6.png" ]
Which cluster is uniquely labeled 'Cluster35_Novel' in the second image?
Cluster35_Novel
2509.23543
[ 5, 7 ]
[ [ [ 334, 1161, 1555, 1644 ] ], [ [ 1007, 1138, 2205, 1587 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23543/2509.23543_5.png", "q-bio/2509.23543/2509.23543_7.png" ]
Which cluster is uniquely labeled 'Cluster35_Novel' in the second image?
[ "q-bio/2509.23543/2509.23543_5.png", "q-bio/2509.23543/2509.23543_7.png" ]
For k=10, what is the F1 Score (weighted) value?
0.862
2509.23543
[ 9, 5 ]
[ [ [ 283, 281, 2271, 2883 ] ], [ [ 691, 2455, 2060, 2873 ] ] ]
[ [ "text" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23543/2509.23543_9.png", "q-bio/2509.23543/2509.23543_5.png" ]
For k=10, what is the F1 Score (weighted) value?
[ "q-bio/2509.23543/2509.23543_9.png", "q-bio/2509.23543/2509.23543_5.png" ]
Which antibiotic has the lowest resistance percentage in the table?
Gentamicin (GEN)
2509.23552
[ 4, 7 ]
[ [ [ 569, 2412, 2134, 2684 ] ], [ [ 394, 1925, 2007, 2661 ] ] ]
[ [ "table" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23552/2509.23552_4.png", "q-bio/2509.23552/2509.23552_7.png" ]
Which antibiotic has the lowest resistance percentage in the table?
[ "q-bio/2509.23552/2509.23552_4.png", "q-bio/2509.23552/2509.23552_7.png" ]
Which model has the highest F1 Score for Ciprofloxacin resistance?
XGBoost
2509.23552
[ 8, 7 ]
[ [ [ 544, 877, 2154, 1154 ] ], [ [ 394, 1925, 2007, 2661 ] ] ]
[ [ "table" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23552/2509.23552_8.png", "q-bio/2509.23552/2509.23552_7.png" ]
Which model has the highest F1 Score for Ciprofloxacin resistance?
[ "q-bio/2509.23552/2509.23552_8.png", "q-bio/2509.23552/2509.23552_7.png" ]
Which model has the highest F1 Score for Ciprofloxacin resistance?
XGBoost
2509.23552
[ 9, 7 ]
[ [ [ 391, 867, 2006, 1142 ] ], [ [ 394, 1925, 2007, 2661 ] ] ]
[ [ "table" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23552/2509.23552_9.png", "q-bio/2509.23552/2509.23552_7.png" ]
Which model has the highest F1 Score for Ciprofloxacin resistance?
[ "q-bio/2509.23552/2509.23552_9.png", "q-bio/2509.23552/2509.23552_7.png" ]
Which model has the highest recall for the resistant class on GEN?
1D CNN
2509.23552
[ 8, 4 ]
[ [ [ 545, 1955, 2157, 2654 ] ], [ [ 569, 2412, 2134, 2684 ] ] ]
[ [ "table" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23552/2509.23552_8.png", "q-bio/2509.23552/2509.23552_4.png" ]
Which model has the highest recall for the resistant class on GEN?
[ "q-bio/2509.23552/2509.23552_8.png", "q-bio/2509.23552/2509.23552_4.png" ]
Which method shows the least variation in the lower graph across all tolerances?
SDIRK: 10^-3
2509.23847
[ 14, 12 ]
[ [ [ 620, 1017, 2072, 1529 ] ], [ [ 667, 337, 1794, 915 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23847/2509.23847_14.png", "q-bio/2509.23847/2509.23847_12.png" ]
Which method shows the least variation in the lower graph across all tolerances?
[ "q-bio/2509.23847/2509.23847_14.png", "q-bio/2509.23847/2509.23847_12.png" ]
At which essential dimension does the EMU runtime exceed 150 ms?
1750
2509.23847
[ 14, 15 ]
[ [ [ 620, 1017, 2072, 1529 ] ], [ [ 363, 853, 1980, 1591 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23847/2509.23847_14.png", "q-bio/2509.23847/2509.23847_15.png" ]
At which essential dimension does the EMU runtime exceed 150 ms?
[ "q-bio/2509.23847/2509.23847_14.png", "q-bio/2509.23847/2509.23847_15.png" ]
Which method shows higher values at 2.5 on the x-axis in the left plot?
EMU
2509.23847
[ 15, 12 ]
[ [ [ 599, 349, 1980, 814 ] ], [ [ 667, 337, 1794, 915 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23847/2509.23847_15.png", "q-bio/2509.23847/2509.23847_12.png" ]
Which method shows higher values at 2.5 on the x-axis in the left plot?
[ "q-bio/2509.23847/2509.23847_15.png", "q-bio/2509.23847/2509.23847_12.png" ]
Which method has the highest value in the first bar chart's second group?
influx_si
2509.23847
[ 20, 15 ]
[ [ [ 456, 1721, 1238, 2300 ] ], [ [ 599, 349, 1980, 814 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23847/2509.23847_20.png", "q-bio/2509.23847/2509.23847_15.png" ]
Which method has the highest value in the first bar chart's second group?
[ "q-bio/2509.23847/2509.23847_20.png", "q-bio/2509.23847/2509.23847_15.png" ]
Which table row contains 'a white and brownish colored sheep'?
Row for 'A zebra standing in the middle of a field.'
2509.23941
[ 56, 60 ]
[ [ [ 295, 388, 2142, 3063 ] ], [ [ 282, 299, 2121, 3151 ] ] ]
[ [ "table" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23941/2509.23941_56.png", "q-bio/2509.23941/2509.23941_60.png" ]
Which table row contains 'a white and brownish colored sheep'?
[ "q-bio/2509.23941/2509.23941_56.png", "q-bio/2509.23941/2509.23941_60.png" ]
Which CorText subject has the highest BLEU-4 score in Table S1?
CorText (Subj. 1)
2509.23941
[ 27, 5 ]
[ [ [ 300, 557, 2182, 2269 ] ], [ [ 453, 885, 1131, 1749 ] ] ]
[ [ "table" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23941/2509.23941_27.png", "q-bio/2509.23941/2509.23941_5.png" ]
Which CorText subject has the highest BLEU-4 score in Table S1?
[ "q-bio/2509.23941/2509.23941_27.png", "q-bio/2509.23941/2509.23941_5.png" ]
What is the position of the green apple relative to the red apples?
Between the two red apples.
2509.23941
[ 40, 29 ]
[ [ [ 294, 301, 2188, 2575 ] ], [ [ 288, 298, 2187, 3110 ] ] ]
[ [ "table" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23941/2509.23941_40.png", "q-bio/2509.23941/2509.23941_29.png" ]
What is the position of the green apple relative to the red apples?
[ "q-bio/2509.23941/2509.23941_40.png", "q-bio/2509.23941/2509.23941_29.png" ]
What is the discrepancy in the number of bananas mentioned?
Two vs. one banana.
2509.23941
[ 49, 51 ]
[ [ [ 287, 297, 2191, 3245 ] ], [ [ 299, 300, 2187, 1006 ] ] ]
[ [ "table" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23941/2509.23941_49.png", "q-bio/2509.23941/2509.23941_51.png" ]
What is the discrepancy in the number of bananas mentioned?
[ "q-bio/2509.23941/2509.23941_49.png", "q-bio/2509.23941/2509.23941_51.png" ]
Which neuromorphic core type requires a global clock pulse for operation?
Digital/hybrid cores only.
2509.23896
[ 5, 8 ]
[ [ [ 415, 615, 1967, 1725 ] ], [ [ 518, 1130, 2063, 2044 ] ] ]
[ [ "table" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23896/2509.23896_5.png", "q-bio/2509.23896/2509.23896_8.png" ]
Which neuromorphic core type requires a global clock pulse for operation?
[ "q-bio/2509.23896/2509.23896_5.png", "q-bio/2509.23896/2509.23896_8.png" ]
Which neuromorphic core unit uses memristors for synaptic weights?
Analog neuromorphic core.
2509.23896
[ 28, 8 ]
[ [ [ 526, 518, 2052, 2422 ] ], [ [ 518, 1130, 2063, 2044 ] ] ]
[ [ "table" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23896/2509.23896_28.png", "q-bio/2509.23896/2509.23896_8.png" ]
Which neuromorphic core unit uses memristors for synaptic weights?
[ "q-bio/2509.23896/2509.23896_28.png", "q-bio/2509.23896/2509.23896_8.png" ]
Which learning mechanism in BNNs involves synaptic plasticity?
Self-organization; synaptic plasticity; predictive coding.
2509.23896
[ 5, 29 ]
[ [ [ 415, 615, 1967, 1725 ] ], [ [ 428, 304, 1949, 2479 ] ] ]
[ [ "table" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23896/2509.23896_5.png", "q-bio/2509.23896/2509.23896_29.png" ]
Which learning mechanism in BNNs involves synaptic plasticity?
[ "q-bio/2509.23896/2509.23896_5.png", "q-bio/2509.23896/2509.23896_29.png" ]
Which field integrates reservoir computing with feedback-driven learning?
Synthetic Biological Intelligence (SBI)
2509.23896
[ 12, 29 ]
[ [ [ 644, 311, 1734, 1068 ] ], [ [ 428, 304, 1949, 2479 ] ] ]
[ [ "image" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23896/2509.23896_12.png", "q-bio/2509.23896/2509.23896_29.png" ]
Which field integrates reservoir computing with feedback-driven learning?
[ "q-bio/2509.23896/2509.23896_12.png", "q-bio/2509.23896/2509.23896_29.png" ]
Which electrode shows the highest SVM accuracy for d-MMN responses?
Fz
2509.23524
[ 2, 4 ]
[ [ [ 205, 759, 2338, 1053 ] ], [ [ 261, 225, 2292, 1207 ] ] ]
[ [ "text" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23524/2509.23524_2.png", "q-bio/2509.23524/2509.23524_4.png" ]
Which electrode shows the highest SVM accuracy for d-MMN responses?
[ "q-bio/2509.23524/2509.23524_2.png", "q-bio/2509.23524/2509.23524_4.png" ]
Which electrode shows the highest SVM accuracy for d-MMN responses?
Fz
2509.23524
[ 1, 4 ]
[ [ [ 1290, 2351, 2344, 2987 ] ], [ [ 261, 225, 2292, 1207 ] ] ]
[ [ "text" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23524/2509.23524_1.png", "q-bio/2509.23524/2509.23524_4.png" ]
Which electrode shows the highest SVM accuracy for d-MMN responses?
[ "q-bio/2509.23524/2509.23524_1.png", "q-bio/2509.23524/2509.23524_4.png" ]
Which electrode shows the highest SVM balanced classification accuracy for d-MMN?
Fz
2509.23524
[ 3, 4 ]
[ [ [ 205, 808, 1254, 1466 ] ], [ [ 261, 225, 2292, 1207 ] ] ]
[ [ "text" ], [ "table" ] ]
q-bio
[ "q-bio/2509.23524/2509.23524_3.png", "q-bio/2509.23524/2509.23524_4.png" ]
Which electrode shows the highest SVM balanced classification accuracy for d-MMN?
[ "q-bio/2509.23524/2509.23524_3.png", "q-bio/2509.23524/2509.23524_4.png" ]
What are the two carrier frequencies used in SSAEP modulation?
1000 Hz and 500 Hz
2509.23524
[ 3, 2 ]
[ [ [ 205, 808, 1254, 1466 ] ], [ [ 205, 759, 2338, 1053 ] ] ]
[ [ "text" ], [ "text" ] ]
q-bio
[ "q-bio/2509.23524/2509.23524_3.png", "q-bio/2509.23524/2509.23524_2.png" ]
What are the two carrier frequencies used in SSAEP modulation?
[ "q-bio/2509.23524/2509.23524_3.png", "q-bio/2509.23524/2509.23524_2.png" ]
Which method has the highest AUC for RNA binding on TEST474?
LAMP-PRo
2509.24262
[ 15, 10 ]
[ [ [ 334, 481, 2141, 1542 ] ], [ [ 1342, 484, 2114, 1126 ] ] ]
[ [ "table" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24262/2509.24262_15.png", "q-bio/2509.24262/2509.24262_10.png" ]
Which method has the highest AUC for RNA binding on TEST474?
[ "q-bio/2509.24262/2509.24262_15.png", "q-bio/2509.24262/2509.24262_10.png" ]
Which method has the highest AUC for RNA Binding on TEST474 dataset?
LAMP-PRo
2509.24262
[ 15, 11 ]
[ [ [ 334, 481, 2141, 1542 ] ], [ [ 702, 2058, 1779, 2486 ] ] ]
[ [ "table" ], [ "table" ] ]
q-bio
[ "q-bio/2509.24262/2509.24262_15.png", "q-bio/2509.24262/2509.24262_11.png" ]
Which method has the highest AUC for RNA Binding on TEST474 dataset?
[ "q-bio/2509.24262/2509.24262_15.png", "q-bio/2509.24262/2509.24262_11.png" ]
Which method has the highest AUC for RNA Binding on TEST474?
LAMP-PRo
2509.24262
[ 16, 15 ]
[ [ [ 8, 0, 2474, 951 ] ], [ [ 334, 481, 2141, 1542 ] ] ]
[ [ "image" ], [ "table" ] ]
q-bio
[ "q-bio/2509.24262/2509.24262_16.png", "q-bio/2509.24262/2509.24262_15.png" ]
Which method has the highest AUC for RNA Binding on TEST474?
[ "q-bio/2509.24262/2509.24262_16.png", "q-bio/2509.24262/2509.24262_15.png" ]
Which heatmap in the first image has the highest attention value for 'R'?
Attention Heatmap - DBP (a)
2509.24262
[ 16, 12 ]
[ [ [ 8, 0, 2474, 951 ] ], [ [ 767, 823, 1752, 1338 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24262/2509.24262_16.png", "q-bio/2509.24262/2509.24262_12.png" ]
Which heatmap in the first image has the highest attention value for 'R'?
[ "q-bio/2509.24262/2509.24262_16.png", "q-bio/2509.24262/2509.24262_12.png" ]
In Fig. 3, what mutant frequency range shows coexistence in the phase portrait?
0.4 to 0.6
2509.23977
[ 3, 6 ]
[ [ [ 11, 0, 2539, 1969 ] ], [ [ 223, 1434, 2347, 2216 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23977/2509.23977_3.png", "q-bio/2509.23977/2509.23977_6.png" ]
In Fig. 3, what mutant frequency range shows coexistence in the phase portrait?
[ "q-bio/2509.23977/2509.23977_3.png", "q-bio/2509.23977/2509.23977_6.png" ]
What term in Eq. (e) captures the collective community effect on dynamics?
η (eta)
2509.23977
[ 3, 4 ]
[ [ [ 11, 0, 2539, 1969 ] ], [ [ 222, 224, 1247, 1024 ] ] ]
[ [ "image" ], [ "text" ] ]
q-bio
[ "q-bio/2509.23977/2509.23977_3.png", "q-bio/2509.23977/2509.23977_4.png" ]
What term in Eq. (e) captures the collective community effect on dynamics?
[ "q-bio/2509.23977/2509.23977_3.png", "q-bio/2509.23977/2509.23977_4.png" ]
What is the frequency range for coexistence in Figure 3(b)?
0.4 to 0.6
2509.23977
[ 2, 6 ]
[ [ [ 1313, 1871, 2344, 3011 ] ], [ [ 223, 1434, 2347, 2216 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23977/2509.23977_2.png", "q-bio/2509.23977/2509.23977_6.png" ]
What is the frequency range for coexistence in Figure 3(b)?
[ "q-bio/2509.23977/2509.23977_2.png", "q-bio/2509.23977/2509.23977_6.png" ]
What is the frequency range for coexistence in Figure 3(b)?
0.6 to 0.8
2509.23977
[ 25, 6 ]
[ [ [ 214, 227, 2346, 511 ] ], [ [ 223, 1434, 2347, 2216 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23977/2509.23977_25.png", "q-bio/2509.23977/2509.23977_6.png" ]
What is the frequency range for coexistence in Figure 3(b)?
[ "q-bio/2509.23977/2509.23977_25.png", "q-bio/2509.23977/2509.23977_6.png" ]
What is the percentage of clusters checked at 50% targeted in D2?
70%
2509.23942
[ 10, 1 ]
[ [ [ 314, 256, 954, 1109 ] ], [ [ 206, 812, 1255, 1787 ] ] ]
[ [ "image" ], [ "text" ] ]
q-bio
[ "q-bio/2509.23942/2509.23942_10.png", "q-bio/2509.23942/2509.23942_1.png" ]
What is the percentage of clusters checked at 50% targeted in D2?
[ "q-bio/2509.23942/2509.23942_10.png", "q-bio/2509.23942/2509.23942_1.png" ]
What is the analogy value when 30% of clusters are targeted in D2?
1.8
2509.23942
[ 5, 10 ]
[ [ [ 1290, 1131, 2351, 1803 ] ], [ [ 1604, 257, 2197, 1078 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23942/2509.23942_5.png", "q-bio/2509.23942/2509.23942_10.png" ]
What is the analogy value when 30% of clusters are targeted in D2?
[ "q-bio/2509.23942/2509.23942_5.png", "q-bio/2509.23942/2509.23942_10.png" ]
What is the ratio of checked to targeted clusters at 30% in D3?
3
2509.23942
[ 2, 10 ]
[ [ [ 1290, 1774, 2346, 2941 ] ], [ [ 980, 257, 1602, 1113 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.23942/2509.23942_2.png", "q-bio/2509.23942/2509.23942_10.png" ]
What is the ratio of checked to targeted clusters at 30% in D3?
[ "q-bio/2509.23942/2509.23942_2.png", "q-bio/2509.23942/2509.23942_10.png" ]
What is the percentage of clusters checked at 50% targeted in D2?
70%
2509.23942
[ 10, 3 ]
[ [ [ 314, 256, 954, 1109 ] ], [ [ 1292, 212, 2347, 751 ] ] ]
[ [ "image" ], [ "text" ] ]
q-bio
[ "q-bio/2509.23942/2509.23942_10.png", "q-bio/2509.23942/2509.23942_3.png" ]
What is the percentage of clusters checked at 50% targeted in D2?
[ "q-bio/2509.23942/2509.23942_10.png", "q-bio/2509.23942/2509.23942_3.png" ]
What is the initial radius of oncolytic virus in mm from Table 1?
0.50 [mm]
2509.24522
[ 7, 14 ]
[ [ [ 362, 428, 2247, 1103 ] ], [ [ 10, 1332, 2541, 3300 ] ] ]
[ [ "table" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24522/2509.24522_7.png", "q-bio/2509.24522/2509.24522_14.png" ]
What is the initial radius of oncolytic virus in mm from Table 1?
[ "q-bio/2509.24522/2509.24522_7.png", "q-bio/2509.24522/2509.24522_14.png" ]
Which curve in the second figure corresponds to α and qv low, Dv high?
Blue curve
2509.24522
[ 14, 23 ]
[ [ [ 10, 1332, 2541, 3300 ] ], [ [ 909, 440, 1771, 977 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24522/2509.24522_14.png", "q-bio/2509.24522/2509.24522_23.png" ]
Which curve in the second figure corresponds to α and qv low, Dv high?
[ "q-bio/2509.24522/2509.24522_14.png", "q-bio/2509.24522/2509.24522_23.png" ]
Which curve in the second figure corresponds to α and qv low, Dv low?
Yellow curve.
2509.24522
[ 16, 23 ]
[ [ [ 1132, 469, 2192, 885 ] ], [ [ 909, 440, 1771, 977 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24522/2509.24522_16.png", "q-bio/2509.24522/2509.24522_23.png" ]
Which curve in the second figure corresponds to α and qv low, Dv low?
[ "q-bio/2509.24522/2509.24522_16.png", "q-bio/2509.24522/2509.24522_23.png" ]
Which parameter in Table 1 has a value of 1.00 × 10⁻² [mm²/h]?
virus diffusion coefficient
2509.24522
[ 7, 23 ]
[ [ [ 362, 428, 2247, 1103 ] ], [ [ 909, 440, 1771, 977 ] ] ]
[ [ "table" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24522/2509.24522_7.png", "q-bio/2509.24522/2509.24522_23.png" ]
Which parameter in Table 1 has a value of 1.00 × 10⁻² [mm²/h]?
[ "q-bio/2509.24522/2509.24522_7.png", "q-bio/2509.24522/2509.24522_23.png" ]
Which layer in ResNet50 is examined for selectivity in Figure 4?
Layer 3.1
2509.24039
[ 8, 1 ]
[ [ [ 450, 2344, 2099, 2791 ] ], [ [ 595, 1216, 1951, 2213 ] ] ]
[ [ "text" ], [ "text" ] ]
q-bio
[ "q-bio/2509.24039/2509.24039_8.png", "q-bio/2509.24039/2509.24039_1.png" ]
Which layer in ResNet50 is examined for selectivity in Figure 4?
[ "q-bio/2509.24039/2509.24039_8.png", "q-bio/2509.24039/2509.24039_1.png" ]
What specific layer in ASTs is examined for selectivity maps?
blocks.9.mlp.fc1
2509.24039
[ 8, 18 ]
[ [ [ 450, 2344, 2099, 2791 ] ], [ [ 450, 1577, 2107, 1897 ] ] ]
[ [ "text" ], [ "text" ] ]
q-bio
[ "q-bio/2509.24039/2509.24039_8.png", "q-bio/2509.24039/2509.24039_18.png" ]
What specific layer in ASTs is examined for selectivity maps?
[ "q-bio/2509.24039/2509.24039_8.png", "q-bio/2509.24039/2509.24039_18.png" ]
What is the maximum performance difference between baseline and topographic models?
Less than 1%.
2509.24039
[ 15, 1 ]
[ [ [ 447, 562, 2101, 923 ] ], [ [ 595, 1216, 1951, 2213 ] ] ]
[ [ "text" ], [ "text" ] ]
q-bio
[ "q-bio/2509.24039/2509.24039_15.png", "q-bio/2509.24039/2509.24039_1.png" ]
What is the maximum performance difference between baseline and topographic models?
[ "q-bio/2509.24039/2509.24039_15.png", "q-bio/2509.24039/2509.24039_1.png" ]
What smoothing kernel size was used for the cortical surface data?
3-mm FWHM 2D Gaussian kernel.
2509.24039
[ 17, 1 ]
[ [ [ 447, 349, 2098, 664 ] ], [ [ 595, 1216, 1951, 2213 ] ] ]
[ [ "text" ], [ "text" ] ]
q-bio
[ "q-bio/2509.24039/2509.24039_17.png", "q-bio/2509.24039/2509.24039_1.png" ]
What smoothing kernel size was used for the cortical surface data?
[ "q-bio/2509.24039/2509.24039_17.png", "q-bio/2509.24039/2509.24039_1.png" ]
Which dataset has the highest value for c=0.50, η=1.05?
COVID-19
2509.24655
[ 16, 17 ]
[ [ [ 632, 577, 1914, 1861 ] ], [ [ 457, 2475, 2152, 2763 ] ] ]
[ [ "image" ], [ "table" ] ]
q-bio
[ "q-bio/2509.24655/2509.24655_16.png", "q-bio/2509.24655/2509.24655_17.png" ]
Which dataset has the highest value for c=0.50, η=1.05?
[ "q-bio/2509.24655/2509.24655_16.png", "q-bio/2509.24655/2509.24655_17.png" ]
Which dataset shows the highest improvement in distance with ENC vs HyperHELM?
COV-19
2509.24655
[ 17, 9 ]
[ [ [ 457, 2475, 2152, 2763 ] ], [ [ 566, 350, 2048, 945 ] ] ]
[ [ "table" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24655/2509.24655_17.png", "q-bio/2509.24655/2509.24655_9.png" ]
Which dataset shows the highest improvement in distance with ENC vs HyperHELM?
[ "q-bio/2509.24655/2509.24655_17.png", "q-bio/2509.24655/2509.24655_9.png" ]
Which codon in the hierarchy is associated with amino acid 'W'?
TGG
2509.24655
[ 16, 8 ]
[ [ [ 632, 577, 1914, 1861 ] ], [ [ 448, 740, 2106, 1336 ] ] ]
[ [ "image" ], [ "table" ] ]
q-bio
[ "q-bio/2509.24655/2509.24655_16.png", "q-bio/2509.24655/2509.24655_8.png" ]
Which codon in the hierarchy is associated with amino acid 'W'?
[ "q-bio/2509.24655/2509.24655_16.png", "q-bio/2509.24655/2509.24655_8.png" ]
Which codon is uniquely connected to the 'Start' label in the hierarchy?
ATG
2509.24655
[ 16, 2 ]
[ [ [ 632, 577, 1914, 1861 ] ], [ [ 1348, 410, 2080, 1234 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24655/2509.24655_16.png", "q-bio/2509.24655/2509.24655_2.png" ]
Which codon is uniquely connected to the 'Start' label in the hierarchy?
[ "q-bio/2509.24655/2509.24655_16.png", "q-bio/2509.24655/2509.24655_2.png" ]
Which figure shows the EX region transitioning from UG to GP at β=1.0?
The right figure.
2509.24692
[ 6, 4 ]
[ [ [ 735, 309, 1719, 787 ] ], [ [ 9, 0, 2470, 1856 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24692/2509.24692_6.png", "q-bio/2509.24692/2509.24692_4.png" ]
Which figure shows the EX region transitioning from UG to GP at β=1.0?
[ "q-bio/2509.24692/2509.24692_6.png", "q-bio/2509.24692/2509.24692_4.png" ]
Which theory line (γ value) most closely matches the simulation (β=2.23)?
Theory: γ = 2.0
2509.24692
[ 17, 4 ]
[ [ [ 393, 265, 1385, 1197 ] ], [ [ 9, 0, 2470, 1856 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24692/2509.24692_17.png", "q-bio/2509.24692/2509.24692_4.png" ]
Which theory line (γ value) most closely matches the simulation (β=2.23)?
[ "q-bio/2509.24692/2509.24692_17.png", "q-bio/2509.24692/2509.24692_4.png" ]
What is the value of β shown in the second figure's title?
2.231
2509.24692
[ 6, 17 ]
[ [ [ 735, 309, 1719, 787 ] ], [ [ 393, 265, 1385, 1197 ] ] ]
[ [ "image" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24692/2509.24692_6.png", "q-bio/2509.24692/2509.24692_17.png" ]
What is the value of β shown in the second figure's title?
[ "q-bio/2509.24692/2509.24692_6.png", "q-bio/2509.24692/2509.24692_17.png" ]
What is the boundary condition for unbounded growth in the phase diagram?
cβ < 1, β < 1.
2509.24692
[ 6, 2 ]
[ [ [ 735, 309, 1719, 787 ] ], [ [ 1259, 837, 2243, 1520 ] ] ]
[ [ "image" ], [ "text" ] ]
q-bio
[ "q-bio/2509.24692/2509.24692_6.png", "q-bio/2509.24692/2509.24692_2.png" ]
What is the boundary condition for unbounded growth in the phase diagram?
[ "q-bio/2509.24692/2509.24692_6.png", "q-bio/2509.24692/2509.24692_2.png" ]
Which configuration of TeraAgent visualizes 39× faster than BioDynaMo?
MPI only configuration.
2509.24063
[ 6, 8 ]
[ [ [ 1319, 2415, 2327, 2952 ] ], [ [ 261, 929, 2327, 1336 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24063/2509.24063_6.png", "q-bio/2509.24063/2509.24063_8.png" ]
Which configuration of TeraAgent visualizes 39× faster than BioDynaMo?
[ "q-bio/2509.24063/2509.24063_6.png", "q-bio/2509.24063/2509.24063_8.png" ]
Which TeraAgent configuration shows higher speedup in Epidemiology compared to MPI only?
MPI hybrid
2509.24063
[ 1, 8 ]
[ [ [ 221, 1199, 1229, 1783 ] ], [ [ 261, 929, 2327, 1336 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24063/2509.24063_1.png", "q-bio/2509.24063/2509.24063_8.png" ]
Which TeraAgent configuration shows higher speedup in Epidemiology compared to MPI only?
[ "q-bio/2509.24063/2509.24063_1.png", "q-bio/2509.24063/2509.24063_8.png" ]
Which TeraAgent configuration visualizes 39× faster than BioDynaMo?
MPI only configuration.
2509.24063
[ 2, 8 ]
[ [ [ 1327, 1935, 2324, 2519 ] ], [ [ 261, 929, 2327, 1336 ] ] ]
[ [ "text" ], [ "image" ] ]
q-bio
[ "q-bio/2509.24063/2509.24063_2.png", "q-bio/2509.24063/2509.24063_8.png" ]
Which TeraAgent configuration visualizes 39× faster than BioDynaMo?
[ "q-bio/2509.24063/2509.24063_2.png", "q-bio/2509.24063/2509.24063_8.png" ]