text stringlengths 185 73.3k | repo stringlengths 7 100 | path stringlengths 4 146 | language stringclasses 7
values | hash stringlengths 16 16 | score float64 7 8.5 | stars int64 0 237k |
|---|---|---|---|---|---|---|
"""
Figure 6
"""
import numpy as np
import pandas as pd
import seaborn as sns
from scipy.stats import ttest_ind, zscore
from .common import getSetup, subplotLabel
def makeFigure():
"""Get a list of the axis objects and create a figure."""
ax, f = getSetup((7, 7), (3, 3))
subplotLabel(ax)
data = np.... | meyer-lab/RISE | analysis/figures/figure6.py | .py | 161ba54c0d991370 | 7.42 | 6 |
"""
Figure S2
"""
import anndata
import numpy as np
import pacmap
import pandas as pd
import scanpy as sc
import scib
from sklearn.decomposition import PCA
# from RISE.plotting import plot_r2x
from RISE.plotting import plot_labels_pacmap
from ..imports import import_thomson_factors
from .common import getSetup, subp... | meyer-lab/RISE | analysis/figures/figureS2.py | .py | 888ae46e924af5e6 | 7.42 | 6 |
"""
Figure S3
"""
import anndata
import seaborn as sns
from matplotlib.axes import Axes
from RISE.plotting import cell_count_perc_df, rotate_xaxis
from ..imports import import_thomson_factors
from .common import getSetup, subplotLabel
def makeFigure():
"""Get a list of the axis objects and create a figure."""
... | meyer-lab/RISE | analysis/figures/figureS3.py | .py | 6ae756643b5de85b | 7.42 | 6 |
"""
Figure S7
"""
import numpy as np
import pandas as pd
import seaborn as sns
from anndata import AnnData
from matplotlib.axes import Axes
from scipy.stats import linregress
from analysis.imports import import_thomson
from RISE.factorization import pf2
from .common import getSetup, subplotLabel
def makeFigure():
... | meyer-lab/RISE | analysis/figures/figureS7.py | .py | cb1af09461f3ea5e | 7.42 | 6 |
"""
Figure 8a_d
"""
import anndata
import seaborn as sns
from matplotlib.axes import Axes
from .common import getSetup, subplotLabel
def makeFigure():
"""Get a list of the axis objects and create a figure."""
ax, f = getSetup((6, 6), (2, 2))
subplotLabel(ax)
X = anndata.read_h5ad("/opt/andrew/lupus... | meyer-lab/RISE | analysis/figures/figureS8a_d.py | .py | cdd3fbbb4fcc8360 | 7.42 | 6 |
"""
Figure 9a_d
"""
import os
import time
import tracemalloc
import anndata
import cupy as cp
import numpy as np
import pandas as pd
import scanorama
# import scvi
import seaborn as sns
# import torch
from harmonypy import run_harmony
from scipy.sparse import csr_array
from analysis.imports import import_lupus
fro... | meyer-lab/RISE | analysis/figures/figureS9a_d.py | .py | d201dd21826fd8ca | 7.42 | 6 |
"""
Figure 9e_f
"""
import anndata
import numpy as np
import pandas as pd
import seaborn as sns
from matplotlib.axes import Axes
from analysis.figures.commonFuncs.plotLupus import samples_only_lupus
from analysis.logisticReg import logistic_regression
from RISE.factorization import correct_conditions
from RISE.plotti... | meyer-lab/RISE | analysis/figures/figureS9e_f.py | .py | f9e66a28e7ed3980 | 7.42 | 6 |
import os
import urllib.request
import anndata
import h5py
import pandas as pd
import vcsc
from anndata.io import read_elem
from parafac2.normalize import prepare_dataset
THOMSON_RAW_URL = (
"https://ucla.box.com/shared/static/jy53rcort51xn5t2dr5927wfj13g9e7j.h5"
)
def download_thomson_raw(
dest_path: str =... | meyer-lab/RISE | analysis/imports.py | .py | 11be12d24fd872cf | 7.42 | 6 |
"""
Test the cross validation accuracy.
"""
import os
import numpy as np
import pytest
from analysis.imports import import_lupus, import_thomson, import_thomson_factors
@pytest.mark.parametrize(
"import_func",
[
import_thomson,
import_lupus,
],
)
def test_imports(import_func):
"""Te... | meyer-lab/RISE | analysis/tests/test_import.py | .py | a778374823272c55 | 7.92 | 6 |
"""Generate figures for the RISE tutorial documentation dynamically during doc build."""
import os
from pathlib import Path
import hdf5plugin # noqa: F401
import matplotlib
matplotlib.use("Agg") # Non-interactive backend
import matplotlib.pyplot as plt
from analysis.imports import import_thomson_factors
from RISE... | meyer-lab/RISE | docs/generate_tutorial_figures.py | .py | 4ce793af88eea259 | 7.42 | 6 |
# ABOUTME: Async httpx client for the Raindrop.io REST API.
# ABOUTME: Paginates raindrops and merges root, nested, and the synthetic "All" collection.
from __future__ import annotations
import os
from typing import Protocol
import httpx
BASE_URL = "https://api.raindrop.io/rest/v1"
PER_PAGE = 50
# Raindrop's system... | JoshuaOliphant/avocet | avocet/raindrop_api.py | .py | efbae0c5d3a7c3ea | 7.64 | 18 |
# ABOUTME: Summary provider seam — Claude and OpenAI real providers, plus a test stub.
# ABOUTME: Fetches a bookmark's page text and asks an LLM for a concise summary, cached by the DB.
from __future__ import annotations
import os
from typing import Protocol
import httpx
from avocet.models import Raindrop
CLAUDE_MO... | JoshuaOliphant/avocet | avocet/summary.py | .py | bcd0f1f5d595bdeb | 7.64 | 18 |
# ABOUTME: Shared test double for the Raindrop API client used by interaction tests.
# ABOUTME: Implements the full RaindropClient protocol; tests subclass and override what they use.
from __future__ import annotations
class BaseFakeRaindrop:
"""A complete RaindropClient stand-in for tests.
Every method rais... | JoshuaOliphant/avocet | tests/fakes.py | .py | 52321033352b981c | 8.14 | 18 |
# ABOUTME: Verifies the app syncs from a (fake) RaindropAPI into the DB on refresh.
# ABOUTME: The fake API returns canned collections/raindrops; no network involved.
from sqlalchemy import create_engine
from sqlalchemy.pool import StaticPool
from avocet.app import Avocet
from avocet.database_manager import DatabaseMa... | JoshuaOliphant/avocet | tests/test_app_sync.py | .py | 8217ba98ced75978 | 7.14 | 18 |
# ABOUTME: Verifies theme changes persist to the DB settings table.
# ABOUTME: Drives a theme change via Pilot and reads the DB settings table to confirm persistence.
from sqlalchemy import create_engine
from sqlalchemy.pool import StaticPool
from avocet.app import Avocet
from avocet.database_manager import DatabaseMa... | JoshuaOliphant/avocet | tests/test_app_theme.py | .py | 98bdd5ca417a8115 | 7.14 | 18 |
# ABOUTME: Tests for DatabaseManager against a real in-memory SQLite engine.
# ABOUTME: StaticPool keeps the schema alive across the sessions the manager opens.
import pytest
from sqlalchemy import create_engine
from sqlalchemy.pool import StaticPool
from avocet.database_manager import DatabaseManager
@pytest.fixtur... | JoshuaOliphant/avocet | tests/test_database_manager.py | .py | e282d8a3d4a68e71 | 7.14 | 18 |
# ABOUTME: Tests for the SQLAlchemy declarative models.
# ABOUTME: Verifies table creation and the Raindrop.summary nullable column.
from sqlalchemy import create_engine, inspect
from sqlalchemy.pool import StaticPool
from avocet.models import Base, Collection, Raindrop, Setting
def test_tables_create():
engine ... | JoshuaOliphant/avocet | tests/test_models.py | .py | 0677b443eddd68f0 | 7.14 | 18 |
# ABOUTME: Tests for the modal screen result dataclasses.
# ABOUTME: Confirms AddResult carries the fields the app needs to call the API.
from avocet.screens import AddResult
def test_add_result_fields():
result = AddResult(link="https://x", collection_id=1, title="Mine", tags=["py", "tui"])
assert result.lin... | JoshuaOliphant/avocet | tests/test_screens.py | .py | 8d803272b2d8eb78 | 7.14 | 18 |
# ABOUTME: Visual regression snapshots via pytest-textual-snapshot.
# ABOUTME: Determinism comes from the seeded in-memory DB + stub provider in seeded_app.py.
from pathlib import Path
APP = str(Path(__file__).parent / "snapshot_apps" / "seeded_app.py")
# Navigate from All (index=None) to Python: first down moves to ... | JoshuaOliphant/avocet | tests/test_snapshots.py | .py | c9bb647ccd29d8da | 7.14 | 18 |
"""Real GDB integration tests for per-session isolation.
Prerequisites:
- GDB installed on system (gdb --version)
- g++ installed (g++ --version)
- Flask server running with threaded=True
"""
import requests
import threading
import time
import os
import subprocess
import unittest
BASE_URL = "http://localhost:10000"
... | c2siorg/GDB-UI | gdbui_server/real_gdb_integration_test.py | .py | 1e0ca1e5f42ca25e | 8.07 | 13 |
"""Per-session Docker container management for GDB sandboxing.
Each session gets a dedicated container with read-only rootfs and no network.
GDB and g++ are invoked via ``docker exec``. The session's output directory
is bind-mounted at /workspace so compiled binaries are immediately available.
Usage::
from sandb... | c2siorg/GDB-UI | gdbui_server/sandbox.py | .py | a994cc46ded29a5f | 7.57 | 13 |
"""Integration tests for WebSocket connection lifecycle and streaming output.
Uses flask-socketio's SocketIOTestClient to exercise the real Socket.IO server
in-process, without requiring a real WebSocket connection or running server.
These tests verify the full pipeline:
create_session -> WebSocket connect -> strea... | c2siorg/GDB-UI | gdbui_server/tests/test_websocket_integration.py | .py | 0ecf06801dd85e42 | 8.07 | 13 |
"""Unit tests for the per-session reader greenlet."""
import unittest
from unittest.mock import patch, MagicMock
import sys
import os
sys.path.insert(0, os.path.join(os.path.dirname(__file__), '..'))
from session_manager import SessionManager
class TestWebSocketReader(unittest.TestCase):
def setUp(self):
... | c2siorg/GDB-UI | gdbui_server/tests/test_websocket_reader.py | .py | 9e0495abac4ce45b | 7.07 | 13 |
"""Platform for Fancoil Modbus."""
from __future__ import annotations
import logging
from typing import TYPE_CHECKING, Any, ClassVar
from homeassistant.components.climate import ClimateEntity
from homeassistant.components.climate.const import (
ClimateEntityFeature,
HVACMode,
)
from homeassistant.components.... | lorenzo93/homeassistant-innova | custom_components/modbus_innova/climate.py | .py | 45ef1dd061f421d2 | 7.54 | 11 |
"""Platform for Fancoil Modbus water temperature sensor."""
from __future__ import annotations
import logging
from typing import TYPE_CHECKING
from homeassistant.components.modbus import get_hub
from homeassistant.components.modbus.const import CALL_TYPE_REGISTER_HOLDING
from homeassistant.components.sensor import (... | lorenzo93/homeassistant-innova | custom_components/modbus_innova/sensor.py | .py | d80045cbefbd5e98 | 7.54 | 11 |
"""
Access definition generator for SurrealDB authentication.
Generates DEFINE ACCESS ... TYPE RECORD statements for user authentication
using SurrealDB's built-in JWT support.
"""
from dataclasses import dataclass, field
from typing import TYPE_CHECKING
from ..types import EncryptionAlgorithm, TableType
if TYPE_CH... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/auth/access.py | .py | d30b6035bcf16b9d | 7.52 | 10 |
"""
Debug and profiling utilities for SurrealDB ORM.
Provides ``QueryLogger``, an async context manager that captures all ORM
queries with timing information for performance profiling and debugging.
Example::
from surreal_orm.debug import QueryLogger
async with QueryLogger() as logger:
users = await... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/debug.py | .py | fa360cde4676cd1a | 7.52 | 10 |
"""
Encrypted field type for password and sensitive data storage.
This module provides the Encrypted[T] type that automatically generates
the appropriate SurrealDB crypto functions in schema definitions.
"""
from dataclasses import dataclass
from typing import TYPE_CHECKING, Annotated, Any, get_args, get_origin
from... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/fields/encrypted.py | .py | 003973db7435e674 | 7.52 | 10 |
"""
Geospatial annotation helpers for SurrealDB.
Provides ``GeoDistance`` that can be used with ``QuerySet.annotate()``
to compute distances between a field and a reference point.
Example::
from surreal_orm import GeoDistance
results = await Restaurant.objects().nearby(
"location", (-73.98, 40.74), ... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/geo.py | .py | f594065dff49b9a0 | 7.52 | 10 |
"""
ORM-level Live Streaming for SurrealDB.
Provides typed model change events via Live Queries (WebSocket) and Change Feeds (HTTP).
Usage:
# Live Models (WebSocket, real-time)
async with User.objects().filter(role="admin").live() as stream:
async for event in stream:
print(event.action, e... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/live.py | .py | f9fc6cc98d433bdf | 7.52 | 10 |
"""
Database introspector for reverse schema extraction.
Reads the live schema from a SurrealDB database using ``INFO FOR DB``
and ``INFO FOR TABLE`` commands, then parses the returned DEFINE
statements into a ``SchemaState`` that can be compared against the
forward-introspected model state.
"""
from __future__ impor... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/migrations/db_introspector.py | .py | 137e96c866e0b58c | 8.02 | 10 |
"""
Migration executor for applying migrations to the database.
This module handles:
- Tracking applied migrations in the database
- Applying pending migrations
- Rolling back migrations
- Executing data migrations (upgrade command)
"""
import importlib.util
import logging
from pathlib import Path
from typing import ... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/migrations/executor.py | .py | ed32dc87392ae55b | 7.52 | 10 |
"""
Model introspection for migration generation.
This module extracts schema information from Pydantic models to build
a SchemaState that can be compared against the current database state.
"""
import types
from typing import TYPE_CHECKING, Any, get_args, get_origin, get_type_hints
from pydantic.fields import Field... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/migrations/introspector.py | .py | f6629507441d10a8 | 8.02 | 10 |
"""
Migration class and utilities for SurrealDB schema migrations.
A Migration represents a set of operations to be applied to the database
in a specific order, with optional dependencies on other migrations.
"""
from dataclasses import dataclass, field
from datetime import UTC, datetime
from typing import TYPE_CHECK... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/migrations/migration.py | .py | f2bd5948b2a9f7a7 | 7.52 | 10 |
"""
Model code generator from schema state.
Generates Python source code for ``BaseSurrealModel`` subclasses from
a ``SchemaState`` obtained via ``DatabaseIntrospector``. This is the
reverse of the ``ModelIntrospector`` → ``SchemaState`` path used by
``makemigrations``.
"""
from __future__ import annotations
import... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/migrations/model_generator.py | .py | 0620edc2579ced80 | 7.52 | 10 |
"""
Prefetch descriptor for fine-grained control over ``prefetch_related()``.
A ``Prefetch`` object lets you customise which related objects are loaded
and how they are attached to the parent instances.
Example::
from surreal_orm import Prefetch
# Default prefetch (equivalent to a plain string)
users = ... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/prefetch.py | .py | f8080809a13aca7e | 7.52 | 10 |
"""
Q objects for building complex query expressions with AND, OR, and NOT logic.
Usage:
from surreal_orm import Q
# OR query
users = await User.objects().filter(
Q(name__contains="alice") | Q(email__contains="alice"),
).exec()
# AND with OR
users = await User.objects().filter(
... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/q.py | .py | 9209088a791cd015 | 7.52 | 10 |
"""
Subquery class for embedding a QuerySet as a filter value in another QuerySet.
Subqueries are compiled to inline sub-SELECT expressions with parameterized
variables that are remapped to avoid collisions with the outer query.
Example::
from surreal_orm import Subquery
# Users whose age matches any active... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/subquery.py | .py | 1f398b645303f0a1 | 7.52 | 10 |
"""
Declarative test fixtures for SurrealDB ORM.
Provides ``SurrealFixture`` base class and ``@fixture`` decorator for
defining reusable test data that is automatically saved to and cleaned
up from the database.
Example::
from surreal_orm.testing import SurrealFixture, fixture
@fixture
class UserFixture... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/testing/fixtures.py | .py | bd12336aefaa9e7f | 8.02 | 10 |
"""
Type definitions for SurrealDB ORM.
This module contains enums and type definitions used throughout the ORM
for table types, schema modes, and field types.
"""
from enum import StrEnum
class TableType(StrEnum):
"""
Table type classification for migration behavior and connection preferences.
Each ta... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/types.py | .py | c6184c3e20d4a7b6 | 7.52 | 10 |
import asyncio
import functools
import json
import logging
import random
import re
from collections.abc import Callable
from typing import Any, TypeVar
logger = logging.getLogger(__name__)
F = TypeVar("F", bound=Callable[..., Any])
# Shared identifier validation regex — used by query_set, model_base, aggregations, e... | EulogySnowfall/SurrealDB-ORM | src/surreal_orm/utils.py | .py | 80a137d960073edf | 7.52 | 10 |
"""
SurrealDB SDK - A custom Python SDK for SurrealDB.
This SDK provides direct connection to SurrealDB via HTTP and WebSocket
without depending on the official surrealdb package.
Supports:
- HTTP connections (stateless, ideal for microservices)
- WebSocket connections (stateful, for real-time features)
- Live Querie... | EulogySnowfall/SurrealDB-ORM | src/surreal_sdk/__init__.py | .py | 8e872788725d979b | 7.52 | 10 |
import os
from time import sleep
from assertpy import assert_that
from integration_tests.deployment.aws.utils.awslambda import invoke_lambda
from integration_tests.deployment.aws.utils.dynamodb import vulnerability_detected_in_time_period
from integration_tests.deployment.aws.utils.general import random_string
from i... | domain-protect/terraform-aws-domain-protect | integration_tests/deployment/aws/test_vulnerabilities.py | .py | b5b13919896b700c | 7.13 | 17 |
# Cloudflare Python version 3.1.1
import os
from time import sleep
from assertpy import assert_that
from integration_tests.deployment.aws.utils.awslambda import invoke_lambda
from integration_tests.deployment.aws.utils.dynamodb import vulnerability_detected_in_time_period
from integration_tests.deployment.aws.utils.g... | domain-protect/terraform-aws-domain-protect | integration_tests/deployment/cloudflare/test_cf_vulnerabilities.py | .py | 93fb96b1cf0f1e75 | 7.13 | 17 |
# Currently not in use - written for Cloudflare Python v2, needs update for v4
# Ignored by pytest.ini file
import uuid
class Zone:
def __init__(self, name) -> None:
self.Name = name
self.Id = uuid.uuid4().hex
self.dns_records = []
class DNSRecord:
def __init__(self, name, record_typ... | domain-protect/terraform-aws-domain-protect | integration_tests/mocks/cloudflare_mock.py | .py | d26a67ae89c85bec | 7.13 | 17 |
from functools import wraps
from typing import Any, Callable
def require_admin(require_guild: bool = True) -> Callable:
"""Enforce admin role and optional guild context for command handlers."""
def decorator(func: Callable) -> Callable:
@wraps(func)
async def wrapper(*args: Any, **kwargs: Any... | compsci-adl/duckbot | src/commands/command_helpers.py | .py | af3a77edfbfbed13 | 7.65 | 19 |
import csv
import logging
import os
import os.path
import random
import re
import tempfile
import time
from collections import defaultdict
from enum import IntEnum
from typing import List, Optional
import requests
from discord import Embed
from dotenv import load_dotenv
from google import genai
from google.genai impor... | compsci-adl/duckbot | src/commands/gemini.py | .py | e888239c468eabfb | 7.65 | 19 |
from discord import (
ButtonStyle,
Color,
Embed,
Interaction,
SelectOption,
app_commands,
ui,
)
class HelpMenu(ui.View):
currentpage: int = 0
commands = []
maxpages: int
def __init__(self, client):
super().__init__()
self.value = None
# Fetch global... | compsci-adl/duckbot | src/commands/help_menu.py | .py | 4cb1f938d8bde885 | 7.65 | 19 |
import asyncio
import logging
from functools import wraps
from pathlib import Path
from typing import List
import aiosqlite
def get_db_folder():
"""Gets the database folder, and creates one if it doesn't exist"""
db_dir = Path.cwd() / "db"
db_dir.mkdir(exist_ok=True)
return db_dir
class Database:
... | compsci-adl/duckbot | src/models/database.py | .py | 664f95658087331c | 7.65 | 19 |
import sqlite3
from pathlib import Path
from models.schema.admin_settings_sql import AdminSettingsSQL
class AdminSettingsDB:
def __init__(self, db_path: str = "db/admin_settings.db"):
# Ensure the data directory exists
Path(db_path).parent.mkdir(parents=True, exist_ok=True)
self.db_path ... | compsci-adl/duckbot | src/models/databases/admin_settings_db.py | .py | 108419a0b2cafe2e | 7.65 | 19 |
from models.database import Database
from models.databases.admin_settings_db import AdminSettingsDB
from models.schema.skullboard_sql import SkullSQL
from utils import time
class SkullboardDB(Database):
"""Singleton class for the skullboard Database"""
_instance = None
def __new__(cls, *args, **kwargs):... | compsci-adl/duckbot | src/models/databases/skullboard_database.py | .py | 8dd45db1d6de70be | 7.65 | 19 |
import logging
import os
from datetime import datetime, timezone
from typing import Any, Dict, List, Optional
from zoneinfo import ZoneInfo
import requests
from utils import cms_helpers
_raw_cms_url = (os.getenv("CMS_URL") or "").strip().strip('"').strip("'").rstrip("/")
if not _raw_cms_url:
_raw_cms_url = "http... | compsci-adl/duckbot | src/utils/cms.py | .py | 725a9295e715319b | 7.65 | 19 |
from __future__ import annotations
from typing import Any, Dict, List
def summarise_docs(
docs: List[Dict[str, Any]],
title_key: str = "title",
desc_keys: List[str] = ["details", "description"],
max_items: int = 100,
desc_limit: int = 200,
prefix: str | None = None,
) -> str:
"""Return a ... | compsci-adl/duckbot | src/utils/cms_helpers.py | .py | 89f4225b563bcc41 | 7.65 | 19 |
import logging
from discord.enums import EventStatus
def get_event_role_name(event_name: str) -> str:
"""Return the role name for a given event."""
return f"Event: {event_name}"
class EventRoleManager:
"""Manages auto-assignment and deletion of event notification roles."""
def __init__(self, bot):... | compsci-adl/duckbot | src/utils/event_roles.py | .py | 9f8015504d7d2bd5 | 7.65 | 19 |
from __future__ import annotations
import difflib
import logging
import re
from typing import Optional
from utils import cms
def matches_any(tokens: list[str], keywords: list[str], cutoff: float = 0.8) -> bool:
"""Return True if any token approximately matches any keyword.
Uses difflib.get_close_matches fo... | compsci-adl/duckbot | src/utils/gemini_rag.py | .py | 09d01b1b3a66bff8 | 7.65 | 19 |
import datetime
import os
import re
import aiohttp
import discord
import Levenshtein
from dotenv import load_dotenv
from models.databases.admin_settings_db import AdminSettingsDB
# Load environment variables from .env file
load_dotenv()
CMS_URL = os.getenv("CMS_URL")
KNOWN_SPAM_MESSAGES_URL = f"{CMS_URL}/api/known-s... | compsci-adl/duckbot | src/utils/spam_detection.py | .py | 05b781d274c9914f | 7.65 | 19 |
from datetime import datetime
import pytz
# Adelaide timezone (UTC+9:30)
tz = pytz.timezone("Australia/Adelaide")
def get_current_day():
"""Generates a numerical value for each day"""
now = datetime.now(tz)
epoch = datetime(1970, 1, 1, tzinfo=tz)
days_since_epoch = (now - epoch).days
return days... | compsci-adl/duckbot | src/utils/time.py | .py | 4a91a76ddfcc3d50 | 7.65 | 19 |
import numpy as np
import scipy.linalg
import numpy.typing as npt
from pyscf import gto, scf
from pyscf.lib import logger
class CQED_RHF:
def __init__(self, molecule: gto.Mole, lambda_vec: npt.NDArray):
"""Initialize RHF calculator with a PySCF Mole object."""
self.mol_ = molecule
self.lam... | Yxwxwx/Model | cqed/cqed-rhf/cqed_rhf.py | .py | a511a35b6f5e9291 | 7.42 | 6 |
"""Reproduce Colbert–Miller JCP 96, 1982 (1992) — Section II.B, Figs. 1–2.
Fig. 1: V_c large (box not limiting) → pure Δx discretisation error.
Fig. 2: Δx small (discretisation not limiting) → pure V_c boundary error.
"""
import numpy as np
from dvr import SincDVR
import matplotlib
matplotlib.use("Agg")
import matpl... | Yxwxwx/Model | dvr/tests/simple_test.py | .py | c6f4850317604a14 | 7.92 | 6 |
import numpy as np
import scipy.sparse
import scipy.sparse.linalg
import time
from typing import Tuple, List, Dict
class HeisenbergDMRG:
"""
1D Heisenberg 模型的哈密顿量 H
H = J * ∑(i=1 to L-1) S_i ⋅ S_(i+1)
= J/2 * ∑(i=1 to L-1) (S⁺_i S⁻_(i+1) + S⁻_i S⁺_(i+1)) + J * ∑(i=1 to L-1) Sᶻ_i Sᶻ_(i+1)
其中：
... | Yxwxwx/Model | idmrg/superblock.py | .py | 5c68e4f8e7d1a970 | 7.42 | 6 |
import jax
import jax.numpy as jnp
import flax.nnx as nnx
import grain.python as grain
from pathlib import Path
from typing import List
import matplotlib.pyplot as plt
def load_stories_from_file(file_path: Path, max_stories: int = 1000) -> List[str]:
"""
Streams the file and splits stories, ensuring each sto... | Yxwxwx/Model | minigpt/helper.py | .py | 3ea75c0c73b21d00 | 7.42 | 6 |
"""Asynchronous Python client for National Energy Dashboard NL."""
from __future__ import annotations
from typing import Any
class NedNLError(Exception):
"""Generic NED NL exception."""
def __init__(self, data: dict[str, Any] | str) -> None:
"""Initialize the exception.
Args:
----
... | klaasnicolaas/python-nednl | src/nednl/exceptions.py | .py | ade267a4b47a61b4 | 7.48 | 8 |
"""Asynchronous Python client for National Energy Dashboard NL."""
from __future__ import annotations
import asyncio
import json
import socket
from dataclasses import dataclass
from importlib import metadata
from typing import Any, Self
from aiohttp import ClientError, ClientResponseError, ClientSession
from aiohttp... | klaasnicolaas/python-nednl | src/nednl/nednl.py | .py | 7dd8e3bdc554f0af | 7.48 | 8 |
from royalur.game import Game
from royalur.lut.board_encoder import SimpleGameStateEncoding
from royalur.lut.reader import LutReader
from royalur.model.player import PlayerType
class LutAgent:
"""
An agent that uses a look-up table to play the game.
NOTE: This agent is only for the light player.
It w... | RosetteGames/royalur-python | royalur/lut/lut_player.py | .py | c5f4eafc9c75916f | 7.5 | 9 |
import json
from typing import Any, Dict
import sys
import time
import numpy as np
class Lut:
"""
This class provides a way to look up values in a
Royal Game of Ur look-up table (LUT).
"""
def __init__(
self,
keys: bytes,
values: bytes,
file_metadata: Dict[str, Any... | RosetteGames/royalur-python | royalur/lut/reader.py | .py | 07ad37d02bf160e6 | 7.5 | 9 |
from enum import Enum
from typing import Optional
class PlayerType(Enum):
"""
Represents the players of a game.
"""
LIGHT = (1, "Light", 'L')
"""
The light player.
"""
DARK = (2, "Dark", 'D')
"""
The dark player.
"""
def __init__(self, value: int, text_name: str, char... | RosetteGames/royalur-python | royalur/model/player.py | .py | 48b1714c3b90659e | 7.5 | 9 |
class Tile:
"""
Represents a position on or off the board.
"""
__slots__ = ("_x", "_y", "_ix", "_iy")
_x: int
_y: int
_ix: int
_iy: int
def __init__(self, x: int, y: int):
if x < 1 or x > 26:
raise ValueError(
f"x must fall within the range [1,... | RosetteGames/royalur-python | royalur/model/tile.py | .py | 165c1ed770a8607f | 7.5 | 9 |
from royalur.model import (
Board, BoardShape, GameMetadata, GameSettings,
Move, PathPair, Piece, Dice,
PlayerType, PlayerState, Roll
)
from royalur.rules.state import (
GameState,
WaitingForRollGameState,
WaitingForMoveGameState,
RolledGameState,
MovedGameState,
WinGameState,
)
from... | RosetteGames/royalur-python | royalur/rules/simple.py | .py | a8b81637fd672608 | 7.5 | 9 |
from royalur.model import Board, PlayerState, PlayerType, Roll, Move
from .state import OngoingGameState
from overrides import overrides
class PlayableGameState(OngoingGameState):
"""
A game state where we are waiting for interactions from a player.
"""
__slots__ = ()
@overrides
def is_playab... | RosetteGames/royalur-python | royalur/rules/state/playable.py | .py | 1598dc7993773f7e | 7.5 | 9 |
import unittest
import random
from royalur import Game
class TestExample(unittest.TestCase):
def test_example(self):
# Create a new game using the Finkel rules.
game = Game.create_finkel()
while not game.is_finished():
turn_player_name = game.get_turn().text_name
... | RosetteGames/royalur-python | test/test_example.py | .py | d58f37bd22b3de47 | 7 | 9 |
from __future__ import annotations
import traceback
from contextlib import contextmanager
from dataclasses import dataclass
from functools import partial
from pathlib import Path
from typing import TYPE_CHECKING
import sqlparse
from django import db
from django.db.backends import utils as _django_utils
from django.db... | MrThearMan/graphene-django-query-optimizer | example_project/app/utils.py | .py | ff712c3a9d699d70 | 7.66 | 20 |
from __future__ import annotations
import logging
import traceback
from pathlib import Path
from typing import TYPE_CHECKING, Any
if TYPE_CHECKING:
from collections.abc import Callable
logger = logging.getLogger(__name__)
BASE_PATH = str(Path(__file__).resolve().parent.parent)
class DotPathFormatter(logging.F... | MrThearMan/graphene-django-query-optimizer | example_project/config/logging.py | .py | aec679b25a8b5ad9 | 7.66 | 20 |
from __future__ import annotations
import contextlib
from typing import TYPE_CHECKING
import graphene
from graphene.utils.str_converters import to_snake_case
from graphene_django.settings import graphene_settings
from graphene_django.utils import DJANGO_FILTER_INSTALLED
from graphql import get_argument_values
from gr... | MrThearMan/graphene-django-query-optimizer | query_optimizer/filter_info.py | .py | 98928783693a7233 | 7.66 | 20 |
from __future__ import annotations
import dataclasses
from copy import copy
from typing import TYPE_CHECKING
from django.contrib.contenttypes.fields import GenericRelation
from django.core.exceptions import ValidationError
from django.db import models
from django.db.models import ManyToManyField, ManyToManyRel, Prefe... | MrThearMan/graphene-django-query-optimizer | query_optimizer/optimizer.py | .py | cec469c846df6a92 | 7.66 | 20 |
from __future__ import annotations
from collections import defaultdict
from typing import TYPE_CHECKING, TypeAlias
from unittest.mock import patch
from django.db.models import ManyToManyField
from django.db.models.fields.related_descriptors import _filter_prefetch_queryset
from .settings import optimizer_settings
i... | MrThearMan/graphene-django-query-optimizer | query_optimizer/prefetch_hack.py | .py | 1ae64c5ee02ec428 | 7.66 | 20 |
from __future__ import annotations
from typing import TYPE_CHECKING
import graphene
import graphene_django
from django_filters.constants import ALL_FIELDS
from graphene_django.utils import is_valid_django_model
from .compiler import optimize_single
from .settings import optimizer_settings
from .typing import Optimiz... | MrThearMan/graphene-django-query-optimizer | query_optimizer/types.py | .py | ccadfaff4a03924f | 7.66 | 20 |
from __future__ import annotations
import logging
from typing import TYPE_CHECKING
from django.db import models
from django.db.models.manager import BaseManager
from .settings import optimizer_settings
if TYPE_CHECKING:
from .typing import Any, ParamSpec, TypeVar, Union
T = TypeVar("T")
P = ParamSpec("... | MrThearMan/graphene-django-query-optimizer | query_optimizer/utils.py | .py | e6239f3cf4e614b7 | 7.66 | 20 |
from __future__ import annotations
from graphene_django.settings import graphene_settings
from graphql_relay import cursor_to_offset
from .typing import TypedDict
__all__ = [
"validate_pagination_args",
]
class PaginationArgs(TypedDict):
after: int | None
before: int | None
first: int | None
la... | MrThearMan/graphene-django-query-optimizer | query_optimizer/validators.py | .py | 2e6113d4affb66ea | 7.66 | 20 |
""" Definition of heuristic and policy neural networks and parallel functions """
from abc import abstractmethod, ABC
from typing import List, Any, TypeVar, Tuple, Optional, Generic, Type
from deepxube.base.nnet_input import NNetInput, PolicyNNetIn
import torch
from torch import nn, Tensor
from torch import optim
fro... | forestagostinelli/deepxube | deepxube/base/nnet.py | .py | fbd1db9f98215ece | 7.64 | 18 |
from typing import List, Tuple, Optional, cast
import torch
from torch import Tensor
import torch.nn as nn
from torch.multiprocessing import Queue, get_context
from deepxube.base.domain import Domain, ActsEnum, StartGoalWalkable, State, Goal, Action
from deepxube.pytorch.nnet_utils import NNetPar
from deepxube.base.n... | forestagostinelli/deepxube | deepxube/tests_cli/time_tests.py | .py | 3d978ee593a88fc2 | 7.14 | 18 |
# wom.py - An asynchronous wrapper for the Wise Old Man API.
# Copyright (c) 2023-present Jonxslays
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without li... | Jonxslays/wom.py | tests/services/test_base.py | .py | 11762dbd5182ed90 | 7.07 | 13 |
# wom.py - An asynchronous wrapper for the Wise Old Man API.
# Copyright (c) 2023-present Jonxslays
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without li... | Jonxslays/wom.py | tests/services/test_behavior.py | .py | a749d9ffcd6bc108 | 8.07 | 13 |
# wom.py - An asynchronous wrapper for the Wise Old Man API.
# Copyright (c) 2023-present Jonxslays
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without li... | Jonxslays/wom.py | tests/test_enums.py | .py | 6eec34a09f7d38c5 | 7.07 | 13 |
# wom.py - An asynchronous wrapper for the Wise Old Man API.
# Copyright (c) 2023-present Jonxslays
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without li... | Jonxslays/wom.py | tests/test_models.py | .py | cba0a25518e06f08 | 7.07 | 13 |
# wom.py - An asynchronous wrapper for the Wise Old Man API.
# Copyright (c) 2023-present Jonxslays
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without li... | Jonxslays/wom.py | tests/test_result.py | .py | b5aade6bb927ff5d | 7.07 | 13 |
# wom.py - An asynchronous wrapper for the Wise Old Man API.
# Copyright (c) 2023-present Jonxslays
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without li... | Jonxslays/wom.py | tests/test_routes.py | .py | 02b03f3e3a9fbaad | 7.07 | 13 |
# wom.py - An asynchronous wrapper for the Wise Old Man API.
# Copyright (c) 2023-present Jonxslays
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without li... | Jonxslays/wom.py | tests/test_serializer.py | .py | 80078d021583981a | 7.07 | 13 |
# wom.py - An asynchronous wrapper for the Wise Old Man API.
# Copyright (c) 2023-present Jonxslays
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without li... | Jonxslays/wom.py | wom/enums.py | .py | 498df09f9a6b621e | 7.57 | 13 |
# wom.py - An asynchronous wrapper for the Wise Old Man API.
# Copyright (c) 2023-present Jonxslays
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without li... | Jonxslays/wom.py | wom/models/competitions/models.py | .py | f52ff2a22602fc03 | 7.57 | 13 |
# wom.py - An asynchronous wrapper for the Wise Old Man API.
# Copyright (c) 2023-present Jonxslays
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without li... | Jonxslays/wom.py | wom/models/groups/enums.py | .py | 6ec2cd2c7e4c6feb | 7.57 | 13 |
# wom.py - An asynchronous wrapper for the Wise Old Man API.
# Copyright (c) 2023-present Jonxslays
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without li... | Jonxslays/wom.py | wom/models/names/models.py | .py | e5e4626bc04f72f3 | 7.57 | 13 |
# wom.py - An asynchronous wrapper for the Wise Old Man API.
# Copyright (c) 2023-present Jonxslays
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without li... | Jonxslays/wom.py | wom/models/players/enums.py | .py | 1735a6259b66d0ec | 7.57 | 13 |
"""Define Microsoft providers."""
from __future__ import annotations
import asyncio
from typing import Final
from msal import PublicClientApplication
from liminal.auth import AuthProvider
from liminal.auth.microsoft.models import (
MSALCacheTokenResponse,
MSALIdentityProviderTokenResponse,
)
from liminal.co... | liminal-ai-security/liminal-sdk-python | liminal/auth/microsoft/device_code_flow.py | .py | 34a219571e94b1fe | 7.42 | 6 |
"""Define models for the auth endpoint."""
from __future__ import annotations
from dataclasses import dataclass
from typing import Literal
from liminal.helpers.model import BaseModel
@dataclass(frozen=True, kw_only=True)
class MSALCacheTokenResponse(BaseModel):
"""Define an MSAL token response from Entra ID.""... | liminal-ai-security/liminal-sdk-python | liminal/auth/microsoft/models.py | .py | 4bd079bb4a969bdb | 7.42 | 6 |
"""Define the LLM endpoint."""
from __future__ import annotations
from collections.abc import Awaitable, Callable
from typing import cast
from liminal.endpoints.llm.models import ModelInstance
from liminal.endpoints.llm.schemas import GetAvailableModelInstancesResponse
from liminal.errors import ModelInstanceUnknown... | liminal-ai-security/liminal-sdk-python | liminal/endpoints/llm/__init__.py | .py | f9b6a68132f3e053 | 7.42 | 6 |
"""Define models for the LLM endpoint."""
from __future__ import annotations
from dataclasses import dataclass, field
from datetime import datetime
from enum import StrEnum
from typing import Literal
from mashumaro import field_options
from liminal.endpoints.llm.models import ModelInstance
from liminal.helpers.mode... | liminal-ai-security/liminal-sdk-python | liminal/endpoints/thread/models.py | .py | 0b6a0ef57db08578 | 7.42 | 6 |
"""Define Microsoft auth tests tests."""
from __future__ import annotations
from typing import NamedTuple
from unittest.mock import Mock
import httpx
import pytest
from pytest_httpx import HTTPXMock
from liminal import Client
from liminal.auth.microsoft.device_code_flow import DeviceCodeFlowProvider
from liminal.er... | liminal-ai-security/liminal-sdk-python | tests/auth/test_microsoft.py | .py | fb0f0d39aef4551c | 7.92 | 6 |
"""Define LLM endpoint tests."""
from __future__ import annotations
from datetime import UTC, datetime
from typing import Any, NamedTuple
import pytest
from pytest_httpx import HTTPXMock
from liminal import Client
from liminal.errors import ModelInstanceUnknownError
from tests.common import TEST_API_SERVER_URL
@p... | liminal-ai-security/liminal-sdk-python | tests/test_llm.py | .py | aa281e2fd5500a43 | 7.92 | 6 |
from typing import Any, Dict
def get_msg_template(method: str) -> Dict[str, Any]:
'''
Create generic message template for the given method call.
'''
message = {}
message["method"] = method
message["data"] = {}
return message
def geometry_to_json(x: float, y: float, w: float, h: float):
... | WayfireWM/pywayfire | wayfire/core/template.py | .py | 8d9467a144c40757 | 7.15 | 19 |
# SPDX-FileCopyrightText: 2024-present Hasan Sezer Tasan <hasansezertasan@gmail.com>
#
# SPDX-License-Identifier: MIT
"""
Basic FastUI Admin example with User and Post models.
Run with:
uvicorn examples.basic.main:app --reload --port 5000
Then visit:
http://localhost:5000/admin/
"""
from __future__ import an... | hasansezertasan/fastui-admin | examples/basic/main.py | .py | ea1718528ead86a7 | 7.45 | 7 |
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