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<ASSISTANT_TASK:> Python Code: from sklearn.manifold import TSNE import matplotlib.pyplot as plt import numpy import pickle from dscribe.descriptors import MBTR from visualise import view dataIn = numpy.genfromtxt('./data/wineInputs.txt', delimiter=',') dataOut = numpy.genfromtxt('./data/wineOutputs.txt', delimiter=',...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: We are going to apply this technique to a database of wine samples. The inputs are 13 chemical descriptors, the output is the index of its class...
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<ASSISTANT_TASK:> Python Code: import deltascope.alignment as ut import numpy as np import pandas as pd import matplotlib.pyplot as plt import h5py import os import re import time import tqdm # -------------------------------- # -------- User input ------------ # -------------------------------- param = { 'gthresh...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Setup Step2: Directories Step3: Extract list of files Step4: Import raw data and perform preprocessing Step5: Example alignment Step6: Proc...
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<ASSISTANT_TASK:> Python Code: import warnings warnings.filterwarnings("ignore") import pandas as pd import numpy as np from scipy.stats import spearmanr, pearsonr from statsmodels.sandbox.stats.multicomp import multipletests from sklearn.model_selection import train_test_split from sklearn.linear_model import LassoLar...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Spearman correlation Step2: correlation Step3: OHVD3 Step4: OHV1D3 Step5: OHV24D3 Step6: ratio_activation Step7: ratio_catabolism Step8: ...
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<ASSISTANT_TASK:> Python Code: from sympy import * from LAPM import * from LAPM.linear_autonomous_pool_model import LinearAutonomousPoolModel B=Matrix([[-2.927714, 0, 0, 0, 0, 0, 0.000000], [0, -14.560, 0, 0, 0, 0, 0], [0, 0, -3.6211195, 0, 0, 0, 0], [0, 0, 0, -...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: In the second line above, we imported also the linear_autonomous_pool_model module which contains most of the functions required for the example...
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<ASSISTANT_TASK:> Python Code: from jyquickhelper import add_notebook_menu add_notebook_menu() E = [10, 15, 7, 19, 2, 5, 7, 16, 3, 9, 15, 0, 1, 15, 6, 11, 0, 14, 7, 9] E def plus_grande_sequence_position_k(E, k=None): if k is None: k = len(E)-1 if k == 0: return [[0]] else : S = ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: L'algorithme optimal est exposé en dernier, la correction propose un cheminement jusqu'à cette solution en introduisant au fur et à mesure les i...
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<ASSISTANT_TASK:> Python Code: # Import python modules import matplotlib import matplotlib.pyplot as plt import numpy as np # Import the NuPyCEE codes from NuPyCEE import sygma from NuPyCEE import omega # Number of timesteps in the simulaton. # See https://github.com/NuGrid/NuPyCEE/blob/master/DOC/Capabilities/Timeste...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: 1. Input Parameters Step2: Run SYGMA Step3: Plot results Step4: 3. Multiple Decay Channels Step5: Example with U-238 Step6: In the case of ...
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<ASSISTANT_TASK:> Python Code: import rdflib import networkx as nx import os rdf_path = 'data/example.rdf' with open(rdf_path, 'r') as f: corrected = f.read().replace('rdf:resource rdf:resource', 'link:link rdf:resource') # The corrected graph will be saved to a file with `_correct...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Correct Zotero RDF Step2: Parse RDF Step3: Create a GraphML file Step4: The code-cell below will create a new GraphML file that we can import...
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<ASSISTANT_TASK:> Python Code: #@title Imports & Utils !pip install -q git+https://www.github.com/google/jax-md import time from functools import partial import numpy as onp import jax.numpy as np from jax import jit from jax import grad from jax import vmap from jax import random from jax import lax from jax.experime...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: <a href="https Step2: Optimization Through Dynamics Step3: Next we need to posit interactions between our model bubbles. We'll assume that we ...
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<ASSISTANT_TASK:> Python Code: from IPython.display import display, Latex, HTML display(HTML(open('01.css').read())) import numpy as np from numpy import array, cos, diag, eye, linspace, pi from numpy import poly1d, sign, sin, sqrt, where, zeros from scipy.linalg import eigh, inv, det %matplotlib inline import matplo...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Numpy and Scipy Step2: Matplotlib Step3: Miscellaneous definitions Step4: 3 DOF System Step5: The plots Step6: Equation of Motion Step7: T...
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<ASSISTANT_TASK:> Python Code: import mxnet as mx import numpy as np #Training data train_data = np.array([[1,2],[3,4],[5,6],[3,2],[7,1],[6,9]]) train_label = np.array([5,11,17,7,9,24]) batch_size = 1 #Evaluation Data eval_data = np.array([[7,2],[6,10],[12,2]]) eval_label = np.array([11,26,16]) train_iter = mx.io.NDA...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Preparing the Data Step2: Once we have the data ready, we need to put it into an iterator and specify parameters such as the 'batch_size', and ...
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<ASSISTANT_TASK:> Python Code: %matplotlib inline import pandas as pd import numpy as np from mySSA import mySSA # private lib from matplotlib.pylab import rcParams rcParams['figure.figsize'] = 11, 4 df = pd.read_csv(r'data\NH.Ts.csv', parse_dates=True, index_col='Year', skiprows=1) df = df['1881':'2016'] df.drop(['S...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: 2. Read data Step2: Convert data to monthly time series Step3: Have a quick plot Step4: 3. Carry out SSA analysis Step5: We can view the con...
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<ASSISTANT_TASK:> Python Code: import pandas as pd import pandas_datareader.data as web import datetime start = datetime.datetime(2015, 1, 1) end = datetime.datetime(2018, 8, 31) spy_data = web.DataReader('SPY', 'yahoo', start, end) spy_data = spy_data.drop(['Volume', 'Adj Close'], axis=1) # sloupce 'Volume' a 'Adj Clo...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Každý řádek představuje cenu pro daný den a to nejvyšší (High), nejnižší (Low), otevírací (Open - začátek dne) a uzavírací (Close - konec dne). ...
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<ASSISTANT_TASK:> Python Code: %matplotlib inline import matplotlib.pyplot as plt import numpy as np import scipy.optimize as opt data = np.load('decay_osc.npz') tdata = data['tdata'] ydata = data['ydata'] dy = data['dy'] plt.errorbar(tdata, ydata, dy, fmt='.k', ecolor='grey') plt.xlabel('t') plt.ylabel('y'); assert T...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Fitting a decaying oscillation Step2: Now, using curve_fit to fit this model and determine the estimates and uncertainties for the parameters
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<ASSISTANT_TASK:> Python Code: from pymongo import MongoClient client = MongoClient('mongodb://localhost:27017/') db = client.phonebook print db.collection_names() data = {'name': 'Alessandro', 'phone': '+39123456789'} db.people.insert(data) print db.collection_names() db.people.insert({'name': 'Puria', 'phone': '+39...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Once the database is retrieved, collections can be accessed as attributes of the database itself. Step2: Each inserted document will receive an...
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<ASSISTANT_TASK:> Python Code: import numpy.random as rand import matplotlib.pyplot as plt import pandas as pd import sys %matplotlib inline print('Python version: ', sys.version) print('Pandas version: ', pd.__version__) plt.style.use('seaborn-dark-palette') variance = .25 #sets variance of epsil...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: The model depicts an economy with multiple periods and an infinite number of producers, all of whom are trying to set prices as close as possibl...
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<ASSISTANT_TASK:> Python Code: %pylab inline %matplotlib inline import os SHOGUN_DATA_DIR=os.getenv('SHOGUN_DATA_DIR', '../../../data') # import all Shogun classes from shogun import * from matplotlib.patches import Ellipse # a tool for visualisation def get_gaussian_ellipse_artist(mean, cov, nstd=1.96, color="red", li...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Gaussian Mixture Models and Expectation Maximisation in Shogun Step2: Set up the model in Shogun Step3: Sampling from mixture models Step4: E...
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<ASSISTANT_TASK:> Python Code: from google.cloud import bigquery compute_alpha = #standardSQL SELECT SAFE_DIVIDE( SUM(arrival_delay * departure_delay), SUM(departure_delay * departure_delay)) AS alpha FROM ( SELECT RAND() AS splitfield, arrival_delay, departure_delay FROM ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step2: <h3> Create a simple machine learning model </h3> Step4: <h3> What is wrong with calculating RMSE on the training and test data as follows? </h...
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<ASSISTANT_TASK:> Python Code: import qspectra as qs import numpy as np import matplotlib.pyplot as plt %matplotlib inline electronic_fmo = np.array(np.mat( 12400 -87.7 5.5 -5.9 6.7 -13.7 -9.9; -87.7 12520 30.8 8.2 0.7 11.8 4.3; 5.5 30.8 12200 -53.5 -2.2 -9.6 6.; -5.9 8.2 -53.5 12310 -70.7 -17. -63.3; ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: FMO dynamics simulated with Redfield theory Step2: Excited state dynamics Step3: The long-time evolution indeed approaches thermal equilibrium...
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<ASSISTANT_TASK:> Python Code: from sklearn.datasets import make_regression from sklearn.model_selection import train_test_split X, y, true_coefficient = make_regression(n_samples=80, n_features=30, n_informative=10, noise=100, coef=True, random_state=5) X_train, X_test, y_train, y_test = train_test_split(X, y, random_...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Linear Regression Step2: Ridge Regression (L2 penalty) Step3: Lasso (L1 penalty) Step4: Linear models for classification Step5: Multi-Class ...
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<ASSISTANT_TASK:> Python Code: def mm(x, k): if x.shape[0] > 1: x=x.T r = np.random.rand(x.shape[1],k) print(r) #print(x.dot(r)) return(x.dot(r)) mm(np.array([[1,2, 1,132, 1,2]]), 5) from sklearn.preprocessing import scale X_train_draw = scale(X_train[::, 0:2]) X_test_draw = scale(X_te...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Вытаскивание даных из файла!
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<ASSISTANT_TASK:> Python Code: import numpy as np import random import matplotlib import matplotlib.pyplot as plt %matplotlib inline matplotlib.rcParams.update({'font.size': 14}) L = 1024 # Anzahl Punkte in der DFT K = 3*L//4 # Anzahl belegter Unterträger, muss gerade sein n_CP = L//4 # Länge des Cyclic Prefix t...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Präambel generieren (BPSK) Step2: IFFT Step3: Cyclic Prefix einfügen Step4: Kanal Step5: Synchronisation Step6: Entzerrung
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<ASSISTANT_TASK:> Python Code: %%bash rm -rf petro git clone git@github.com:steinwurf/petro.git %%bash ls petro %%bash cd petro ./waf configure --bundle-path=~/dev/bundle_dependencies %%bash cd petro ./waf build %%bash wget http://download.blender.org/peach/bigbuckbunny_movies/BigBuckBunny_320x180.mp4 %%bash ./p...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Lets see which files we have Step2: First step is to run the configure step (--bundle-path refers to where external dependencies are downloaded...
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<ASSISTANT_TASK:> Python Code: from scipy.stats import norm # properties of the distribution from numpy.random import normal # samples from the distribution import numpy as np import scipy from matplotlib import pyplot as plt %matplotlib inline x = np.arange(-10, 10, 0.001) plt.plot(x,norm.pdf(x,0,1)) # final argument...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: All hypotheses discussed herein will be expressed with Gaussian / normal distributions. Let's look at the properties of this distribution. Step2...
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<ASSISTANT_TASK:> Python Code: import numpy as np np.linspace(0,10,11) def myFib(a,b): return a+b fibLength = 10 #the length we want for our Fibonacci sequence fibSeq = np.zeros(fibLength) #make a numpy array of 10 zeros # Let's define the first 2 elements of the Fibonacci sequence fibSeq[0] = 0 fibSeq[1] = 1 i ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: You can do a lot with the numpy module. Below is an example to jog your memory Step2: Do you remember the Fibonacci sequence from yesterday's L...
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<ASSISTANT_TASK:> Python Code: %matplotlib notebook %matplotlib inline import numpy as np import dh_py_access.lib.datahub as datahub import xarray as xr import matplotlib.pyplot as plt import ipywidgets as widgets from mpl_toolkits.basemap import Basemap,shiftgrid import dh_py_access.package_api as package_api import m...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: <font color='red'>Please put your datahub API key into a file called APIKEY and place it to the notebook folder or assign your API key directly ...
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<ASSISTANT_TASK:> Python Code: from __future__ import print_function import time from PIL import Image import numpy as np import matplotlib import matplotlib.pyplot as plt %matplotlib inline import keras from keras import backend as K from keras.models import Model from keras import metrics from keras.applications.vgg1...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Load Data Step2: Recreate Input Step3: Recreate Style Step4: Style Transfer Step5: Different Approach (TOFIX)
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<ASSISTANT_TASK:> Python Code: import os #os 모듈을 통해서 #운영체제 레벨(서버는 ex.우분투)에서 다루는 파일 폴더 생성하고 삭제하기가 가능 #기존에는 ("../../~~") 이런 식으로 경로를 직접 입력 했으나 os.listdir() #현재 폴더 안에 있는 파일들을 리스트로 뽑는 것 os.listdir("../") for csv_file in os.listdir("../"): pass [ file_name for file_name in os.listdir("../01일차.수_입문/") if ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: ipynb 라는 확장자로 끝나는 파일들만 가지고 오려면 Step2: 파일에 대한 경로를 생성할 때 Step3: os.curdir #current directory Step4: 폴더를 만들 때, os.listdir()로 특정 폴더가 있는지 확인한 ...
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<ASSISTANT_TASK:> Python Code: import numpy as np import matplotlib.pyplot as plt %matplotlib inline f = open("parkinsons.data","r") header = f.readline() names = header.strip().split(',')[1:] data = np.loadtxt(f ,delimiter=',', usecols=1 + np.arange(23)) data.shape names x=np.arange(10).reshape((2, 5)) x np.delete? np...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Two indicator variables is equivalent to using single variable, so we Step2: That's about the same ratio of 0's and 1's. Step3: and in the ori...
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<ASSISTANT_TASK:> Python Code: import hdbscan import debacl import fastcluster import sklearn.cluster import scipy.cluster import sklearn.datasets import numpy as np import pandas as pd import time import matplotlib.pyplot as plt import seaborn as sns %matplotlib inline sns.set_context('poster') sns.set_palette('Paired...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Now we need some benchmarking code at various dataset sizes. Because some clustering algorithms have performance that can vary quite a lot depen...
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<ASSISTANT_TASK:> Python Code: import numpy as np import scipy.linalg as lg from scipy.spatial.distance import cosine import matplotlib.pyplot as plt import pandas as pd np.set_printoptions(precision=2) pd.set_option('precision', 2) %matplotlib inline %precision 2 def sim(v1,v2): #コサイン類似度 return 1-cosine(v1,v2) # ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: 特異値分解 Step2: 低ランク近似 Step3: 文書ベクトルの次元削減 Step4: 文書$d1$と$d2$の特徴空間上での類似度を計算してみよう. Step5: このように,次元削減された文書ベクトル${{\bf d}_i^{(k)}}$間のコサイン類似度が,低ランク近似...
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<ASSISTANT_TASK:> Python Code: !pip install --pre deepchem import deepchem as dc import tensorflow as tf keras_model = tf.keras.Sequential([ tf.keras.layers.Dense(1000, activation='relu'), tf.keras.layers.Dropout(rate=0.5), tf.keras.layers.Dense(1) ]) model = dc.models.KerasModel(keras_model, dc.models.los...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: There are actually two different approaches you can take to using TensorFlow or PyTorch models with DeepChem. It depends on whether you want to...
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<ASSISTANT_TASK:> Python Code: %matplotlib inline from IPython.display import Image import numpy as np import matplotlib.pyplot as plt import openmc # 1.6 enriched fuel fuel = openmc.Material(name='1.6% Fuel') fuel.set_density('g/cm3', 10.31341) fuel.add_nuclide('U235', 3.7503e-4) fuel.add_nuclide('U238', 2.2625e-2) f...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Generate Input Files Step2: With our three materials, we can now create a materials file object that can be exported to an actual XML file. Ste...
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<ASSISTANT_TASK:> Python Code: import pandas as pd #data munging import numpy as np #number functions import os #directory and file functions import pylab as plt #graphing functions import socket #machine id import seaborn as sns from matplotlib.font_manager import FontProperties print "working directory = " + os.getc...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Player ratings predict outcome Step2: A note about standard errors Step3: See how the change in player average rating changs the sharpness of ...
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<ASSISTANT_TASK:> Python Code: #@title Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writin...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: 自定义训练 Step2: 鸢尾花分类问题 Step3: 检查数据 Step4: 我们可以从该数据集视图中注意到以下信息: Step5: 每个标签都分别与一个字符串名称(例如 “setosa” )相关联,但机器学习通常依赖于数字值。标签编号会映射到一个指定的表示法,例如: Step...
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<ASSISTANT_TASK:> Python Code: import tarfile import time import os import getpass import paramiko import arrow curtime = time.strftime("%d-%b-%Y-%H", time.gmtime()) sshgetdrn = paramiko.SSHClient() sshgetdrn.set_missing_host_key_policy(paramiko.AutoAddPolicy()) usrg = getpass.getuser() sshgetdrn.connect('128.199.60.12...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: I want datetime printed as year-month-day-hour-min.
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<ASSISTANT_TASK:> Python Code: %matplotlib inline import ABCPRC as prc import numpy as np import scipy.stats as stats import matplotlib.pyplot as plt def ibm(*ps): lbda,delta,gamma = ps[0],ps[1],ps[2] dt = 1.0 #time step n = 100 #population number T = 100 #total time simulation is run for. class Pe...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Define model Step2: Let's run the model and plot the results for some values. Step3: Setting up the model fitting Step4: Fit tolerances to si...
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<ASSISTANT_TASK:> Python Code: import numpy as np from geoscilabs.mag import Mag, Simulator %matplotlib inline #Input parameters fileName = 'https://github.com/geoscixyz/geosci-labs/raw/master/assets/mag/data/DO27_TMI.dat' xyzd = np.genfromtxt(fileName, skip_header=3) B = np.r_[60308, 83.8, 25.4] survey, dobj = Mag.cr...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: How do we define direction of an earth magnetic field? Step2: Magnetic applet
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<ASSISTANT_TASK:> Python Code: from owslib.csw import CatalogueServiceWeb endpoint = 'http://www.ngdc.noaa.gov/geoportal/csw' csw = CatalogueServiceWeb(endpoint, timeout=30) import pandas as pd ioos_ras = ['AOOS', # Alaska 'CaRA', # Caribbean 'CeNCOOS', # Central and Northern Califo...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: We will use the same list of all the Regional Associations as before, Step2: The function below is similar to the one we used before. Step3: C...
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<ASSISTANT_TASK:> Python Code: # Adding module path to sys path if not there, so rl_coach submodules can be imported import os import sys import tensorflow as tf module_path = os.path.abspath(os.path.join('..')) resources_path = os.path.abspath(os.path.join('Resources')) if module_path not in sys.path: sys.path.app...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Preset based - using CoachInterface Step2: Running each training or inference iteration manually Step3: Sometimes we may want to track the age...
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<ASSISTANT_TASK:> Python Code: # Prepare my slides %pylab inline %cd working # ipython !curl -kLO http://github.com/barronh/GCandPython/archive/master.zip import zipfile zf = zipfile.ZipFile('master.zip') zf.extractall() %mv GCandPython-master GCandPython def foo(bar): return 'foo.' + bar print(foo('bar')) try: ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Objectives Step2: Open Notebook Step3: Basic Types Step5: strings Step6: slices Step7: ANSWERS Hidden Step8: Intro to numpy/scipy/matplotl...
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<ASSISTANT_TASK:> Python Code: %matplotlib inline from datetime import date import time import pandas as pd import numpy as np pd.options.display.max_colwidth = 60 from Curves.Corporates.CorporateDailyVasicek import CorporateRates from Boostrappers.CDSBootstrapper.CDSVasicekBootstrapper import BootstrapperCDSLadder fro...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Create forward bond future PV (Exposure) time profile Step2: Data input for the CouponBond portfolio Step3: Create Libor and portfolioSchedule...
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<ASSISTANT_TASK:> Python Code: print('Hello, Wolrd!') print('This is Python.') def greet(): return 'Hello, World!' message = greet() print(message) def sum_a_and_b(a, b): return a + b print(sum_a_and_b(5, 3)) def print_arguments(arg1, arg2, arg3='Foo', arg4='Bar', g=9.81): print('arg1:\t', arg1) prin...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: group the two print statements into a print_all function Step2: Rewrite welcome in the style of greet. It should substitute the user name and r...
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<ASSISTANT_TASK:> Python Code: def GenerateBimodalData(muA, muB, sigmaA, sigmaB, p, N=1000): dataA = np.random.normal(muA, sigmaA, int(p*N)) dataB = np.random.normal(muB, sigmaB, int((1-p)*N)) return np.concatenate([dataA, dataB]) data = GenerateBimodalData(-2, 2, 1, 1, 0.9) test = BayesBimodalTest(data, nt...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Firstly let's check that the MCMC chains have converged and that the resulting posteriors are sensible. Step2: Okay so what is the Bayes factor...
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<ASSISTANT_TASK:> Python Code: root_directory = 'D:/github/w_vattenstatus/ekostat_calculator'#"../" #os.getcwd() workspace_directory = root_directory + '/workspaces' resource_directory = root_directory + '/resources' user_id = 'test_user' # ## Initiate EventHandler print(root_directory) paths = {'user_id': user_id, ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Set subset filters Step2: #####################################################################################################################...
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<ASSISTANT_TASK:> Python Code: import mpslib as mps import numpy as np import matplotlib.pyplot as plt O=mps.mpslib(method='mps_snesim_tree', parameter_filename='mps_snesim.txt') #O=mps.mpslib(method='mps_genesim', parameter_filename='mps_genesim.txt') TI1, TI_filename1 = mps.trainingimages.strebelle(3, coarse3d=1) O.p...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Hard data Step2: Soft/uncertain data Step3: Example 1 Step4: Example 2 Step5: Example 3
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<ASSISTANT_TASK:> Python Code: # For recording the model specification from collections import OrderedDict # For making plots pretty import seaborn # For file input/output import pandas as pd # For vectorized math operations import numpy as np # For plotting import matplotlib.pyplot as plt # For model estimation and p...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Load the dataset Step2: Create the model specification Step3: Estimate the various models to be used for prediction Step4: Estimate the MNL m...
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<ASSISTANT_TASK:> Python Code: #import packages import pandas as pd import glob import csv from xml.etree.ElementTree import ElementTree import re #function to load a csv file #accepts folderpath and headerlist as parameter to load the data files def file_csv(folderpath,addheader,headerlist): #this reads all files...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Motivation Step2: The blocks below contain functions to parse and count all entries in each loaded database. Since XML files have a table struc...
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<ASSISTANT_TASK:> Python Code: rf = 0.04 np.random.seed(1) mus = np.random.normal(loc=0.05,scale=0.02,size=5) + rf sigmas = (mus - rf)/0.3 + np.random.normal(loc=0.,scale=0.01,size=5) num_years = 10 num_months_per_year = 12 num_days_per_month = 21 num_days_per_year = num_months_per_year*num_days_per_month rdf = pd.Data...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Create Trend signal over the last 12 months Step2: Compare EW and 1/vol
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<ASSISTANT_TASK:> Python Code: from math import pi def degrees_to_radians(theta_d): Convert an angle from degrees to radians. Parameters ---------- theta_d : float The angle in degrees. Returns ------- theta_r : float The angle in radians. ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Loops Step2: We showed above how to use this code to print the angles $(n \pi)/ 12$ for $n = 1, 2, \dots, 6$. We did this by calling the degree...
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<ASSISTANT_TASK:> Python Code: urlpattern = { "results": "https://materialsproject.org/molecules/results?query={spec}", "mol_json": "https://materialsproject.org/molecules/{mol_id}/json", "mol_svg": "https://materialsproject.org/molecules/{mol_id}/svg", "mol_xyz": "https://materialsproject.org/molecules...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Setup Step3: Getting a set of molecules Step4: What if we just want "everything"? Let's use an empty spec. Step5: The above request might tak...
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<ASSISTANT_TASK:> Python Code: # Authors: Chris Holdgraf <choldgraf@gmail.com> # Eric Larson <larson.eric.d@gmail.com> # # License: BSD-3-Clause import numpy as np import matplotlib.pyplot as plt import mne from mne.decoding import ReceptiveField, TimeDelayingRidge from scipy.stats import multivariate_normal f...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Load audio data Step2: Create a receptive field Step3: Simulate a neural response Step4: Fit a model to recover this receptive field Step5: ...
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<ASSISTANT_TASK:> Python Code: import pandas as pd import numpy as np np.random.seed(10) df = pd.DataFrame(np.random.randint(0, 20, (10, 10)).astype(float), columns=["c%d"%d for d in range(10)]) df.where(np.random.randint(0,2, df.shape).astype(bool), np.nan, inplace=True) def g(df): return df.columns[df.iloc[0,:].f...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description:
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<ASSISTANT_TASK:> Python Code: !mkdir -p ../data !wget -P ../data -qN ftp://sidads.colorado.edu/pub/DATASETS/NOAA/G02135/north/daily/data/NH_seaice_extent_final.csv !wget -P ../data -qN ftp://sidads.colorado.edu/pub/DATASETS/NOAA/G02135/north/daily/data/NH_seaice_extent_nrt.csv !wget -P ../data -qN ftp://sidads.colora...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: code to read the CSV files. Step2: Read CSV data Step3: Add columns for year and month Step4: Add 5 day rolling mean to the timesereis. Step5...
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<ASSISTANT_TASK:> Python Code: !pip install tf-nightly import numpy as np import tensorflow as tf model = tf.keras.models.Sequential([ tf.keras.layers.Input(shape=(28, 28), name='input'), tf.keras.layers.LSTM(20, time_major=False, return_sequences=True), tf.keras.layers.Flatten(), tf.keras.layers.Dense...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Step 1 Step2: Step 2 Step3: Step 3 Step4: Step 4
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<ASSISTANT_TASK:> Python Code: %reload_ext autoreload %autoreload 2 %matplotlib inline import matplotlib import matplotlib.pyplot as plt import sys, subprocess, time, dendropy import numpy as np bindir="/home/leo/local/bin/" localdir="/tmp/" def run_uspr (tree1, tree2, fast = False): localfile = localdir + "pair.tr...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Function that generates random trees and calculates SPR (and others) distances Step2: the figure above shows that the replug distance (from USP...
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<ASSISTANT_TASK:> Python Code: !pip show systemml from systemml import MLContext ml = MLContext(sc) print ("SystemML Built-Time:"+ ml.buildTime()) print(ml.info()) # Workaround for Python 2.7.13 to avoid certificate validation issue while downloading any file. import ssl try: _create_unverified_https_context = ssl...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: SystemML Build information Step2: Download model, proto files and convert them to SystemML format. Step3: PrintTopK Step4: Classify images St...
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<ASSISTANT_TASK:> Python Code: # conda install ipyrad -c bioconda # conda install raxml -c bioconda # conda install toytree -c eaton-lab import ipyrad.analysis as ipa import toytree # the path to your HDF5 formatted seqs file data = "/home/deren/Downloads/ref_pop2.seqs.hdf5" # check scaffold idx (row) against scaffold...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Load the data Step2: Quick full example Step3: The results table (tree table) Step4: Filter and examine the tree table Step5: The tree infer...
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<ASSISTANT_TASK:> Python Code: from dolfin import * from rbnics import * from sampling import LinearlyDependentUniformDistribution @PullBackFormsToReferenceDomain() @AffineShapeParametrization("data/t_bypass_vertices_mapping.vmp") class Stokes(StokesProblem): # Default initialization of members def __init__(se...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: 3. Affine decomposition Step2: 4. Main program Step3: 4.2. Create Finite Element space (Taylor-Hood P2-P1) Step4: 4.3. Allocate an object of ...
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<ASSISTANT_TASK:> Python Code: %pylab notebook %precision 4 from scipy import constants as c # we like to use some constants mu_r = 2000 mu = mu_r * c.mu_0 l1 = 1.08 # [m] l2 = 0.34 # [m] l3 = 0.0005 # [m] l4 = 1.08 # [m] A1 = 0.09 * 0.05 # [m²] A2 = 0.15 * 0.05 # [m²] A3 = 0.15 * 0.05 * ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Description Step2: SOLUTION Step3: The reluctances of the regions in core are Step4: And the reluctances are hence Step5: Then the total rel...
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<ASSISTANT_TASK:> Python Code: # put your code here. %matplotlib inline import matplotlib.pyplot as plt import numpy as np x1 = np.arange(0.0,20.0,4.0) y1 = np.sin(x1) plt.plot(x1,y1,'r-') # put your code here. x2 = np.arange(0.0,20.0,1.0) y2 = np.sin(x2) plt.plot(x1,y1,'r-',x2,y2,'b-') # put your code here x3 = np.a...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Does the plot above look like a sine function? Why or why not? Step2: Question 3 Step3: How did your plot of sin(x) change appearance as you...
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<ASSISTANT_TASK:> Python Code: from marvin import config config.setRelease('MPL-4') from marvin.tools.query import Query, Results, doQuery # make a query myquery = 'nsa.sersic_logmass > 10.3 AND nsa.z < 0.1' q = Query(searchfilter=myquery) # run a query r = q.run() print(r) print('Total count', r.totalcount) print('...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Let's look at the Marvin Results object. We can see how many results were returned with r.count and r.totalcount Step2: Queries returning more...
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<ASSISTANT_TASK:> Python Code: from IPython.display import HTML import os HTML( <video width="320" height="240" controls> <source src="btf.m4v" type="video/mp4"> </video> ) import sqlite3 import pandas as pd pd.set_option('display.max_colwidth', -1) ## Read sqlite query results into a pandas DataFrame # conn = sqli...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step2: Data was collected using this method. It uses the Twitter API to go some days back in time, and then continuously streaming forward in real-time...
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<ASSISTANT_TASK:> Python Code: %matplotlib inline import numpy as np import math import matplotlib.pyplot as plt import seaborn from astropy.io import fits from astropy import units as u from astropy.coordinates import SkyCoord plt.rcParams['figure.figsize'] = (12, 8) plt.rcParams['font.size'] = 14 plt.rcParams['lines....
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: In order to know the altitude and azimuth of a fixed target in the sky we will mainly need to know Step2: You can also search by its name if it...
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<ASSISTANT_TASK:> Python Code: # As usual, a bit of setup import time import numpy as np import matplotlib.pyplot as plt # from cs231n.classifiers.fc_net import * # from cs231n.classifiers.fc_net import * from cs231n.classifiers.fc_net import FullyConnectedNet from cs231n.data_utils import get_CIFAR10_data from cs231n....
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Batch Normalization Step2: Batch normalization Step3: Batch Normalization Step4: Test on simple example - Remove the mean only Step5: The di...
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<ASSISTANT_TASK:> Python Code: #Add all dependencies to PYTHON_PATH import sys sys.path.append("/usr/lib/spark/python") sys.path.append("/usr/lib/spark/python/lib/py4j-0.10.4-src.zip") sys.path.append("/usr/lib/python3/dist-packages") #Define environment variables import os os.environ["HADOOP_CONF_DIR"] = "/etc/hadoop/...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Connect to Spark Step2: Read a GeoTiff file Step3: Visualization Step4: Interactive visualization Step5: Histogram
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<ASSISTANT_TASK:> Python Code: import numpy as np %matplotlib inline import matplotlib.pyplot as plt import seaborn as sns import networkx as nx K_5=nx.complete_graph(5) nx.draw(K_5) def complete_deg(n): Return the integer valued degree matrix D for the complete graph K_n. f=np.zeros((n,n), dtype=int) #create...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Complete graph Laplacian Step3: The Laplacian Matrix is a matrix that is extremely important in graph theory and numerical analysis. It is defi...
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<ASSISTANT_TASK:> Python Code: %pylab inline import datajoint as dj from pipeline import mice, experiment, vis, preprocess, tuning pylab.rcParams['figure.figsize'] = (8, 8) # make figures bigger erd = dj.ERD(preprocess.Sync) - 2 erd += dj.ERD(preprocess.Spikes) - 3 erd += experiment.Session erd += dj.ERD(tuning.Mon...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Below is the outline of processing chain. Step2: The color code Step3: For any tables or relational expressions derived from them, you may se...
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<ASSISTANT_TASK:> Python Code: from pathlib import Path import tempfile import numpy as np import scipy.ndimage import matplotlib.pyplot as plt import mne data_path = Path(mne.datasets.sample.data_path(verbose=False)) sample_dir = data_path / 'MEG' / 'sample' subjects_dir = data_path / 'subjects' raw_path = sample_dir...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Before getting started with Step2: Adding events Step3: Adding ~mne.Epochs Step4: Adding ~mne.Evoked Step5: Adding ~mne.Covariance Step6: ...
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<ASSISTANT_TASK:> Python Code: %bash rm -rf data mkdir data cd data RADAR=KIWA YEAR=2013 MONTH=07 DAY=23 HOUR=23 gsutil cp gs://gcp-public-data-nexrad-l2/$YEAR/$MONTH/$DAY/$RADAR/*_$RADAR_${YEAR}${MONTH}${DAY}${HOUR}0000_${YEAR}${MONTH}${DAY}${HOUR}5959.tar temp.tar tar xvf temp.tar rm *.tar ls # Based on # http://arm...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: <h3> Install Py-ART </h3> Step2: <h2> Plot into png </h2> Step3: <h2> Create animating PNG </h2>
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<ASSISTANT_TASK:> Python Code: from nipype import Node, Workflow from nipype.interfaces.fsl import BET, IsotropicSmooth # Initiate a skull stripping Node with BET skullstrip = Node(BET(mask=True, in_file='/data/ds102/sub-01/anat/sub-01_T1w.nii.gz'), name="skullstrip") isosmooth ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Create a smoothing Node with IsotropicSmooth Step2: Now, to use iterables and therefore smooth with different fwhm is as simple as that Step3: ...
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<ASSISTANT_TASK:> Python Code: %matplotlib inline import matplotlib.pyplot as plt import numpy as np import seaborn as sns x = np.linspace(0,4*np.pi,10) x f = np.sin(x) print(f) c = np.cos(x) print (c) plt.plot(x, f, marker='o') plt.xlabel('x') plt.ylabel('f(x)'); from scipy.interpolate import interp1d x = np.linsp...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Overview Step2: This creates a new array of points that are the values of $\sin(x_i)$ at each point $x_i$ Step3: This plot shows that the poin...
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<ASSISTANT_TASK:> Python Code: import tensorflow as tf tf.compat.v1.disable_eager_execution() input = [10, 20, 30] def g(input): ds = tf.data.Dataset.from_tensor_slices(input) ds = ds.flat_map(lambda x: tf.data.Dataset.from_tensor_slices([x, x + 1, x + 2])) element = tf.compat.v1.data.make_one_shot_iterator...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description:
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<ASSISTANT_TASK:> Python Code: def modp(n: int, p: int): ret = 1 for i in range(n): ret = (2 * ret) % p return ret <END_TASK>
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description:
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<ASSISTANT_TASK:> Python Code: import cellpy from cellpy.utils import plotutils cell = cellpy.get("../testdata/hdf5/20160805_test001_45_cc.h5", mass=0.8) plotutils.raw_plot(cell) fig = plotutils.cycle_info_plot( cell, cycle=3, use_bokeh=False, ) <END_TASK>
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: And let´s load a data-set Step2: If you have holoviews installed, you can get an interactive figure Step3: Sometimes it is necessary to have a...
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<ASSISTANT_TASK:> Python Code: %matplotlib inline import numpy as np import tensorflow as tf import matplotlib.pyplot as plt from tensorflow.examples.tutorials.mnist import input_data mnist = input_data.read_data_sets('MNIST_data', validation_size=0) img = mnist.train.images[2] plt.imshow(img.reshape((28, 28)), cmap='G...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Network Architecture Step2: Training Step3: Denoising Step4: Checking out the performance
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<ASSISTANT_TASK:> Python Code: import pandas as pd import matplotlib.pyplot as plt from sklearn import linear_model import numpy as np from math import ceil dtype_dict = {'bathrooms':float, 'waterfront':int, 'sqft_above':int, 'sqft_living15':float, 'grade':int, 'yr_renovated':int, 'price':float, 'bedrooms':float, 'zip...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Load the data Step2: Data exploration Step3: Helper functions Step4: Ridge regression model fitting Step5: Ridge regression on subsets Step6...
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<ASSISTANT_TASK:> Python Code: # Ensure compatibility with Python 2 and 3 from __future__ import print_function, division %matplotlib inline import numpy as np import matplotlib.pyplot as plt import climlab # create a zero-dimensional domain with a single surface temperature state = climlab.surface_state(num_lat=1, ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Contents Step2: <a id='section2'></a> Step3: Here we have created a dictionary called state with a single item called Ts Step4: This dictiona...
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<ASSISTANT_TASK:> Python Code: DON'T MODIFY ANYTHING IN THIS CELL THAT IS BELOW THIS LINE from urllib.request import urlretrieve from os.path import isfile, isdir from tqdm import tqdm import problem_unittests as tests import tarfile cifar10_dataset_folder_path = 'cifar-10-batches-py' class DLProgress(tqdm): last_b...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Image Classification Step2: Explore the Data Step5: Implement Preprocess Functions Step8: One-hot encode Step10: Randomize Data Step12: Che...
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<ASSISTANT_TASK:> Python Code: %matplotlib inline import numpy as np import pandas as pd from pandas.tools.plotting import scatter_matrix from sklearn.datasets import load_boston import matplotlib as mpl import matplotlib.pyplot as plt import seaborn as sns sns.set_context('poster') sns.set_style('whitegrid') plt.rcPar...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: BQPlot Step2: ipyvolume
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<ASSISTANT_TASK:> Python Code: from fig_utils import * import matplotlib.pyplot as plt import time %matplotlib inline country_path = '../data/output/LSMS/pooled/' percentiles = [0.05, 0.10, 0.15, 0.20, 0.25, 0.30, 0.35, 0.40, 0.45, 0.50, 0.55, 0.60, 0.65, 0.70, 0.75, 0.80, 0.85, 0.90, 0.9...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Transfer learning vs. nightlights Step2: Panel B Step3: Randomization tests Step4: Panel D
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<ASSISTANT_TASK:> Python Code: import os, tempfile import logging import matplotlib as mpl import matplotlib.pyplot as plt import seaborn as sns import numpy as np from ionchannelABC import theoretical_population_size from ionchannelABC import IonChannelDistance, EfficientMultivariateNormalTransition, IonChannelAccepto...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Initial set-up Step2: Plot steady-state and tau functions Step3: Combine model and experiments to produce Step4: Set up prior ranges for each...
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<ASSISTANT_TASK:> Python Code: import featuretools as ft import pandas as pd import dask.dataframe as dd id = [0, 1, 2, 3, 4] values = [12, -35, 14, 103, -51] df = pd.DataFrame({"id": id, "values": values}) dask_df = dd.from_pandas(df, npartitions=2) dask_df from woodwork.logical_types import Double, Integer es = ft.E...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Now that we have our Dask DataFrame, we can start to create the EntitySet. Inferring Woodwork logical types for the columns in a Dask dataframe ...
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<ASSISTANT_TASK:> Python Code: model = LogisticRegression() model.fit(dataset.data, dataset.target) expected = dataset.target predicted = model.predict(dataset.data) # classification metrics report builds a text report showing the main classification metrics # In pattern recognition and information retrieval with binar...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: We typically need the following libraries
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<ASSISTANT_TASK:> Python Code: import pymongo from pymongo import MongoClient import time import pandas as pd import numpy as np import seaborn as sns import matplotlib.pyplot as plt import csv Client = MongoClient("mongodb://bridges:readonly@nbi-mongo.admin/bridge") db = Client.bridge collection = db["bridges"] def ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Connecting to National Data Service Step2: Deterioration Curves of West United states Step3: Filtering Null Values, Converting JSON format to ...
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<ASSISTANT_TASK:> Python Code: %matplotlib inline import matplotlib.pyplot as plt import numpy as np a=np.random.randn(2,10) x=a[0,:] x y=a[1,:] y plt.scatter(x,y,color='red') plt.grid(True) plt.box(False) plt.xlabel('random x values') plt.ylabel('random y values') plt.title('TITLE') a=np.random.randn(1,10) x=a[0,:] ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Scatter plots Step2: Histogram
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<ASSISTANT_TASK:> Python Code: import numpy as np print("Numpy:", np.__version__) dir(np) location = 'Bethesda' zip_code = 20892 elevation = 71.9 print("We're in", location, "zip code", zip_code, ", ", elevation, "m above sea level") print("We're in " + location + " zip code " + str(zip_code) + ", " + str(elevation) ...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Python Summary Step2: Variables Step3: Types Step4: Conditionals Step5: Loops Step6: Functions Step7: Numpy Step8: Exercises Step9: Prin...
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<ASSISTANT_TASK:> Python Code:: import nltk nltk.download('stopwords') from nltk.corpus import stopwords stop_words = stopwords.words('english') df['tweet'] = df['tweet'].apply(lambda x: ' '.join([word for word in x.split() if word not in (stop_words)])) <END_TASK>
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description:
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<ASSISTANT_TASK:> Python Code: #importieren sie die Bibliothek pandas import pandas as pd #importieren sie matplotlib.pyplot as plt import matplotlib.pyplot as plt %matplotlib inline #laden Sie die Datei "daten.csv" auf Ihren Hub #laden Sie die Datei "daten.csv" in einen Datframe df #Einlesen der Dateien mit pd.read_cs...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: <h2> Erstes Neuronales Netz - Single Layer</h2> Step2: <h2> Initialisierung eines zweiten Neuronalen Netzes - Multi Layer</h2> Step3: <h2>Erze...
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<ASSISTANT_TASK:> Python Code: # DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'mpi-m', 'mpi-esm-1-2-hr', 'aerosol') # Set as follows: DOC.set_author("name", "email") # TODO - please enter value(s) # Set as follows: DOC.set_contributor("name...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Document Authors Step2: Document Contributors Step3: Document Publication Step4: Document Table of Contents Step5: 1.2. Model Name Step6: 1...
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<ASSISTANT_TASK:> Python Code: import sys niftynet_path = '/Users/foo/Documents/Niftynet/' sys.path.insert(0, niftynet_path) from niftynet.utilities.download import download download('mr_ct_regression_model_zoo_data') !{sys.executable} -m pip install matplotlib from niftynet.io.image_reader import ImageReader from nif...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Image as 'window' Step2: The sampler can be used as a numpy function, or a tensorflow operation. Step3: Use the sampler as a tensorflow op Ste...
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<ASSISTANT_TASK:> Python Code: a = [5, 3, -2, 9, 1] # Метод sort меняет существующий список a.sort() print(a) a = [5, 3, -2, 9, 1] a.sort(reverse=True) print(a) # Обычно строки сортируются в алфавитном порядке a = ["bee", "all", "accessibility", "zen", "treasure"] a.sort() print(a) # А используя сортировку по ключу м...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Сортировка в обратном порядке Step2: Сортировка по ключу Step3: В качестве параметра key можно указывать не только встроенные функции, но и са...
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<ASSISTANT_TASK:> Python Code: %matplotlib inline %config InlineBackend.figure_format = 'retina' import numpy as np import pandas as pd import matplotlib.pyplot as plt data_path = 'Bike-Sharing-Dataset/hour.csv' rides = pd.read_csv(data_path) rides.head() rides[:24*10].plot(x='dteday', y='cnt') dummy_fields = ['seas...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Load and prepare the data Step2: Checking out the data Step3: Dummy variables Step4: Scaling target variables Step5: Splitting the data into...
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<ASSISTANT_TASK:> Python Code: from __future__ import print_function import os import matplotlib.pyplot as plt %matplotlib inline import numpy as np import chainer train, val, test = chainer.datasets.get_ptb_words() print('train type: ', type(train), train.shape, train) print('val type: ', type(val), val.shape, val...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Download PTB dataset Step2: The dataset structure is numpy.ndarray. Step3: Word ID and word correspondence Step4: Convert to word sequences S...
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<ASSISTANT_TASK:> Python Code: DON'T MODIFY ANYTHING IN THIS CELL import helper data_dir = './data/simpsons/moes_tavern_lines.txt' text = helper.load_data(data_dir) # Ignore notice, since we don't use it for analysing the data text = text[81:] view_sentence_range = (0, 10) DON'T MODIFY ANYTHING IN THIS CELL import num...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: TV Script Generation Step3: Explore the Data Step6: Implement Preprocessing Functions Step9: Tokenize Punctuation Step11: Preprocess all the...
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<ASSISTANT_TASK:> Python Code: %matplotlib inline from pymatbridge import Octave octave = Octave() octave.start() %load_ext pymatbridge %%matlab %% Définition du signal d'intêret % fréquence du signal freq = 0.3; % on crée des blocs off/on de 15 secondes bloc = repmat([zeros(1,15*freq) ones(1,15*freq)],[1 10]); % l...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Section 1 Step2: 3. Répétez les questions 1.1 et 1.2 avec un bruit dit blanc, généré ci dessous. Step3: 4. Bruit respiratoire. Step4: 5. Lign...
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<ASSISTANT_TASK:> Python Code: import psas_packet from psas_packet.io import BinFile import csv import matplotlib.pyplot as plt from matplotlib import gridspec %matplotlib inline FPS2M = 0.3048 LBF2N = 4.44822 LBS2KG = 0.453592 # Extend PSAS Packet to include our state message psas_packet.messages.MESSAGES["STAT"] = ps...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Message Receive Time Step2: IMU Noisy Acceleration Step3: State Tracking
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<ASSISTANT_TASK:> Python Code: # A program that calculates the final grade for each student. # Scores for Assignment 1, Assignment 2, and Final Exam. sam_scores = [90, 80, 90] yuko_scores = [90, 100, 80] sam_weighted_score = 0.2 * sam_scores[0] + 0.2 * sam_scores[1] + 0.6 * sam_scores[2] sam_grade = 'PASS' if sam_weigh...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: lang Step2: lang Step3: lang Step4: lang Step5: lang Step6: lang Step7: lang Step9: 5. Exercise Step11: 5.2. Returning the First Item th...
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<ASSISTANT_TASK:> Python Code: print('Hello, world') # This is a code cell my_variable = 5 print(my_variable) import hail as hl from bokeh.io import output_notebook, show hl.init() output_notebook() hl.utils.get_1kg('data/') ! ls -1 data/ hl.import_vcf('data/1kg.vcf.bgz').write('data/1kg.mt', overwrite=True) mt...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Modes Step2: This is a markdown cell, so even if something looks like code (as below), it won't get executed! Step3: Common gotcha Step4: Now...
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<ASSISTANT_TASK:> Python Code: import os import sys sys.path.append(os.getcwd().replace("notebooks/awsCluster", "src/awsCluster")) from util import DesignFileLoader ## S3 input and output address. s3_input_files_address = "s3://path/to/s3_input_files_address" s3_output_files_address = "s3://path/to/s3_output_files_addr...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: 2. Create CFNCluster Step2: After you verified the project information, you can execute the pipeline. When the job is done, you will see the lo...
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<ASSISTANT_TASK:> Python Code: # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, sof...
<SYSTEM_TASK:> Given the following text description, write Python code to implement the functionality described below step by step <END_TASK> <USER_TASK:> Description: Step1: Cat vs. Dog Image Classification Step2: These are just a few of the options available (for more, see the Keras documentation. Let's quickly go ...