type
string
sequence
string
canonical_smiles
string
pKd_value
float64
label
int64
buffer
string
origin
string
source
string
RNA
GGGAGAAGGCGGCGCGUAGGCGAGCUUUACCAGUUUUAUUUGUUUUAUUGUUAUAUGCUUAUUCGUGGACGAUGCGCAC
CNC1C(OC2OC(CO)C(N)C(O)C2O)OC2CC(N)C(OC3C(N)CC(N)C(O)C3O)OC2C1O
null
1
PBS with 10% (v/v) methanol
22793869
AptaDB
DNA
GGTAATACGACTCACTATAGGGAGATACCAGCTTATTCAATTTTACAGAACAACCAACGTCGCTCCGGGTACTTCTTCATCGAGATAGTAAGTGCAATCT
O=[As]O[As]=O
null
1
150 mM NaCl, 50mM HEPES, 0.5 mM MgCl2, 0.5 mM CaCl2
20000526
AptaDB
RNA
GGAUGUCCAGUCGCUUGCAAUGCCCUUUUAGACCCUGAUGAGCGGUGCUAGUUAGUUGCAGUUUCGGUUGUUACGCGAAACGGUGAAAGCCGUAGGUCU
COC(=O)C(Cc1ccccc1)NC(=O)C(N)CC(=O)O
null
1
500 mM NaCl, 10 mM MgCl2, 1 mM EDTA, 10 mM sodium phosphate, 90 mM HEPES (pH 7.5)
15026535
AptaDB
DNA
CACCTGGGGGAGTATTGCGGAGGAAGGTTCCAGGTG
Nc1ncnc2c1ncn2C1OC(COP(=O)(O)OP(=O)(O)OP(=O)(O)O)C(O)C1O
null
1
PBS + 5mM MgCl2
27041474
AptaDB
DNA
TGTACCGTCTGAGCGATTCGTACGAACGGCTTTGTACTGTTTGCACTGGCGGATTTAGCCAGTCAGTGTTAAGGAGTGC
CCNc1nc(Cl)nc(NC(C)C)n1
null
1
500 ¶ÃL of buffer consisting of 100 mM sodium chloride, 20 mM Tris-HCl, and 2 mM magnesium chloride
25196435
AptaDB
DNA
TGTACCGTCTGAGCGATTCGTACCATTAGTGGGTGCTCCTTACCTGATGGTCATCTAGCCAGTCAGTGTTAAGGAGTGC
CCNc1nc(Cl)nc(NC(C)C)n1
null
1
500 ¶ÃL of buffer consisting of 100 mM sodium chloride, 20 mM Tris-HCl, and 2 mM magnesium chloride
25196435
AptaDB
DNA
TGTACCGTCTGAGCGATTCGTACGGATTGGGTTTGCACTTTACCTGCGGTGCATCGCAGCCAGTCAGTGTTAAGGAGTGC
CCNc1nc(Cl)nc(NC(C)C)n1
null
1
500 ¶ÃL of buffer consisting of 100 mM sodium chloride, 20 mM Tris-HCl, and 2 mM magnesium chloride
25196435
AptaDB
DNA
GGCTCTCGGGACGACATGGATTTTCCATCAACGAAGTGCGTCCGTCCC
CC12CCC3c4ccc(O)cc4CCC3C1CCC2O
null
1
20 mm Tris (pH 7.4), 1 M NaCl, 10 mM MgCl2
22142383
AptaDB
DNA
CCGGTGGGTGGTCAGGTGGGATAGCGTTCCGCGTATGGCCCAGCGCATCACGGGTTCGCACCA
CC(C)(c1ccc(O)cc1)c1ccc(O)cc1
null
1
25 mM Tris-HCl, 100 mM NaCl, 25 mM KCl, 10 mM MgCl2, and 5.0% DMSO (pH 8.0)
21413891
AptaDB
RNA
GGAUGUCCAGUCGCUUGCAAUGCCCUUUUAGACCCUGAUGAGGAUCAUCGGACUUUGUCCUGUGGAGUAAGAUCGCGAAACGGUGAAAGCCGUAGGUCU
Cn1c(=O)c2c(ncn2C)n(C)c1=O
null
1
500 mM NaCl, 10 mM MgCl2, 1 mM EDTA, 10 mM sodium phosphate, 90 mM HEPES (pH 7.5)
15026535
AptaDB
RNA
GGAUAAUAGCCGUAGGUUGCGAAAGCGACCCUGAUGAGAAAGCCAAAGCCGUAGCGCAGAUGAUCUCGCCAUCAGUACCGAAACGGUAGCGAGAGCUC
[Cd]
null
1
50 mM Tris-HCl, pH 7.5, 20 mM MgCl2
11283591
AptaDB
DNA
GGGGACTGTTGTGGTATTATTTTTGGTTGTGCAGT
[Cd]
null
1
4-(2-Hydroxyethyl)piperazine-1-ethanesulfonic acid sodium salt (HEPES) buffer (pH 7.3)
28660339
AptaDB
RNA
GGAUAAUAGCCGUAGGUUGCGAAAGCGACCCUGAUGAGCCCUGCGAUGCAGAAAGGUGCUGACGACACAUCGAAACGGUAGCGAGAGCUC
Nc1nc2c(ncn2C2OC3COP(=O)([O-])OC3C2O)c(=O)[nH]1.[Na+]
null
1
50 mM Tris-HCl, pH 7.5, 20 mM MgCl2
11283591
AptaDB
DNA
CCTAAGGGGGGACTCAGCATTTTGTGCGGGCGGCGCTAACACAATCAGATAGAGCGGGGTT
CC(=O)NC1C(O)OC(CO)C(O)C1O
null
1
100 mM NaCl, 100 mM KCl, 5 mM MgCl2, 50 mM Tris-acetate (pH 8.0)
10743940
AptaDB
DNA
CCCAGCAGCACTGGTAGTGAGGCAGTTCACCGGTGGGGCGGTGAGTTTGGCTGCTATTTAT
CC(=O)NC1C(O)OC(CO)C(O)C1O
null
1
100 mM NaCl, 100 mM KCl, 5 mM MgCl2, 50 mM Tris-acetate (pH 8.0)
10743940
AptaDB
DNA
TGCGCATGTGAAAGGTTGCCTAACTGGACAGGGTTTAGGAGCGACTAGACACAG
CC(=O)NC1C(O)OC(CO)C(O)C1O
null
1
100 mM NaCl, 100 mM KCl, 5 mM MgCl2, 50 mM Tris-acetate (pH 8.0)
10743940
AptaDB
DNA
GGCAAGATGTGCCCAGAACAGTTGCTTGTATGGTGGGGAGCGTCCATATTGGCTTAAAC
CC(=O)NC1C(O)OC(CO)C(O)C1O
null
1
100 mM NaCl, 100 mM KCl, 5 mM MgCl2, 50 mM Tris-acetate (pH 8.0)
10743940
AptaDB
DNA
ACCTGCGATAGGTAGTTTGTTTCTGTTGCCCTAGCGTCCGTCGTAACAAGTCA
CC(=O)NC1C(O)OC(CO)C(O)C1O
null
1
100 mM NaCl, 100 mM KCl, 5 mM MgCl2, 50 mM Tris-acetate (pH 8.0)
10743940
AptaDB
DNA
CCGTAACCCTGCGGGGGGGGGAGAAGGCAATGGGGGACAACTCGCCGGTAGCCATCCATAT
CC(=O)NC1C(O)OC(CO)C(O)C1O
null
1
100 mM NaCl, 100 mM KCl, 5 mM MgCl2, 50 mM Tris-acetate (pH 8.0)
10743940
AptaDB
DNA
CGTACAGTGGGCTATATTGCTGACGTAAGAGCTGCTTTCAATGCATTGGCATAGATGTCA
CC(=O)NC1C(O)OC(CO)C(O)C1O
null
1
100 mM NaCl, 100 mM KCl, 5 mM MgCl2, 50 mM Tris-acetate (pH 8.0)
10743940
AptaDB
RNA
AUGAAAAGGGCUGGCGAGACAUAUCCGCUGGGCAAUCAGAUUCGGAGCCGCACCACCCUCGAAGUAGACA
O=C(NC(CO)C(O)c1ccc([N+](=O)[O-])cc1)C(Cl)Cl
null
1
20 mM MgCl2, 400 mM NaCl, 100 mM bis-Tris (pH 6.4)
9384530
AptaDB
RNA
AGAGCUUGACGGUCCCGAGAGUCGAGCCCAAGCUGACACUGGACCUUUGCGGACCACGUGUUGAUCGUCG
O=C(NC(CO)C(O)c1ccc([N+](=O)[O-])cc1)C(Cl)Cl
null
1
20 mM MgCl2, 400 mM NaCl, 100 mM bis-Tris (pH 6.4)
9384530
AptaDB
RNA
GGCACCAAAGCUGAAGUAGCGGGAUAACUCAAAUUACUUUAGGUGUAUGAAGGUGAAACUAGCAAUGAA
O=C(NC(CO)C(O)c1ccc([N+](=O)[O-])cc1)C(Cl)Cl
null
1
20 mM MgCl2, 400 mM NaCl, 100 mM bis-Tris (pH 6.4)
9384530
AptaDB
DNA
ACTTCAGTGAGTTGTCCCACGGTCGGCGAGTCGGTGGTAG
O=C(NC(CO)C(O)c1ccc([N+](=O)[O-])cc1)C(Cl)Cl
null
1
100 mM NaCl, 20 mM Tris-HCl, 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2, 0.02 Tween 20, pH 7.6, r.t.
21839787
AptaDB
DNA
CACCAAGCGCAGGGAATTACATTGAAGTGTGGGATTGGCT
O=C(NC(CO)C(O)c1ccc([N+](=O)[O-])cc1)C(Cl)Cl
null
1
100 mM NaCl, 20 mM Tris-HCl, 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2, 0.02 Tween 20, pH 7.6, r.t.
21839787
AptaDB
DNA
ACTGAGGGCACGGACAGGAGGGGGAGAGATGGCGTGAGGT
O=C(NC(CO)C(O)c1ccc([N+](=O)[O-])cc1)C(Cl)Cl
null
1
100 mM NaCl, 20 mM Tris-HCl, 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2, 0.02 Tween 20, pH 7.6, r.t.
21839787
AptaDB
DNA
ATGCGGGTATATGGTGCGAGAAAACAAGGGGCATACTGGA
O=C(NC(CO)C(O)c1ccc([N+](=O)[O-])cc1)C(Cl)Cl
null
1
100 mM NaCl, 20 mM Tris-HCl, 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2, 0.02 Tween 20, pH 7.6, r.t.
21839787
AptaDB
DNA
GTACCAGCTTATTCAATTCGCGGAAGACGAATTCCAAGCGCGCGCGGGTCACGCGACTTGGGAATGAGCAAGGGTTGGCCCGAGATAGTATGTTCATCAG
CC(CCC(=O)O)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C
null
1
50 mM Tris-HCl, 300 mM NaCl, 30 mM KCl, 5 mM MgCl2, pH 7.6
10978501
AptaDB
DNA
GTACCAGCTTATTCAATTGGGCGAAGGAACATACGGCAGTTTATGGCCGCTATCGAGATAGACTATCATCTCAACGTCTTCTAGATAGTATGTTCATCAG
CC(CCC(=O)O)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C
null
1
50 mM Tris-HCl, 300 mM NaCl, 30 mM KCl, 5 mM MgCl2, pH 7.6
10978501
AptaDB
DNA
GTACCAGCTTATTCAATTGCGAGCAGGGTCAATGGAATTAATGATCAATTGACAGACGCAAGTCTCCTGCGGTCCTGTGTTGAGATAGTATGTTCATCAG
CC(CCC(=O)O)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C
null
1
50 mM Tris-HCl, 300 mM NaCl, 30 mM KCl, 5 mM MgCl2, pH 7.6
10978501
AptaDB
DNA
GTACCAGCTTATTCAATTACACGGACAGAGGGTAGCGGCTCTGCGCATTGAGTTGCTGCGGGCTGAAGCGCGGTACATGGGAGATAGTATGTTCATCAG
CC(CCC(=O)O)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C
null
1
50 mM Tris-HCl, 300 mM NaCl, 30 mM KCl, 5 mM MgCl2, pH 7.6
10978501
AptaDB
DNA
GATCGAGGGCAGCGATAGCTGGGCTAATAAGGTTAGCCCCATCGGTC
CC(CCC(=O)O)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C
null
1
50 mM Tris-HCl, 300 mM NaCl, 30 mM KCl, 5 mM MgCl2, pH 7.6
10978501
AptaDB
RNA
GGAUAAUAGCCGUAGGUUGCGAAAGCGACCCUGAUGAGAAAGCCAAAGCCGUAGCGCAGAUGAUCUCGCCAUCAGUACCGAAACGGUAGCGAGAGCUC
[Co]
null
1
50 mM Tris-HCl, pH 7.5, 20 mM MgCl2
11283591
AptaDB
DNA
GGGAGACAAGGAAAATCCTTCAATGAAGTGGGTCGACA
COC(=O)C1C(OC(=O)c2ccccc2)CC2CCC1N2C
null
1
20 mM, pH7, 200 mM NaCl
11457319
AptaDB
DNA
GGAATGGATCCACATCCATGGATGGGCAATGCGGGGTGGAGAATGGTTGCCGCACTTCGGCTTCACTGCAGACTTGACGAAGCTT
CC12CCC(=O)C=C1CCC1C2C(O)CC2(C)C1CCC2(O)C(=O)CO
null
1
50 mM Tris, 137 mM NaCl, 5 mM MgCl2, pH 7.4
24880870
AptaDB
DNA
GGGAATTCGAGCTCGGTACCATCTGTGTAAGGGGTAAGGGGTGGGGGTGGGTACGTCTAGCTGCAGGCATGCAAGCTTGG
COc1cccc2c1C(=O)c1c(O)c3c(c(O)c1C2=O)CC(O)(C(C)=O)CC3OC1CC(N)C(O)C(C)O1
null
1
20 mM Tris-HCl (pH 7.4), 140 mM NaCl, 5 mM KCl, 1 mM MgCl2, 1 mM CaCl2, and 0.05% v/v Tween-20
25248985
AptaDB
DNA
ACCATCTGTGTAAGGGGTAAGGGGTGGGGGTGGGTACGTCT
COc1cccc2c1C(=O)c1c(O)c3c(c(O)c1C2=O)CC(O)(C(C)=O)CC3OC1CC(N)C(O)C(C)O1
null
1
20 mM Tris-HCl (pH 7.4), 140 mM NaCl, 5 mM KCl, 1 mM MgCl2, 1 mM CaCl2, and 0.05% v/v Tween-20
25248985
AptaDB
DNA
CTCTCGGGACGACGGCTGGCACGTTTGGTTCAAGAATGTGGGTGTCGTCCC
OCC1(O)OCC(O)C(O)C1O
null
1
Shinkai's receptor 50 uM with 2% methanol
25343606
AptaDB
DNA
CTCTCGGGACGACCACTACGCATAGTTTCTATCGCCAGGAAGGGTCGTCCC
OCC1OC(O)C(O)C(O)C1O
null
1
Shinkai's receptor 50 uM with 2% methanol
25343606
AptaDB
DNA
CTCTCGGGACGACAGCCGAGTTGATTCAACAGCCGAGTCGTCCC
OCC1OC(O)C(O)C(O)C1O
null
1
Shinkai's receptor 50 uM with 2% methanol
25343606
AptaDB
RNA
GGGCUAUUGCUGGAGGGGCGCCACAUGAAAGUGGUGGUUGGGUGCGGUCGGCGAUAGCUC
COc1cc(C=C2N=CNC2=O)cc(OC)c1O
null
1
40 mM HEPES pH 7.4 (or 40 mM Bicine pH 8.0), 125 mM KCl, 5 mM MgCl2, and 5% DMSO
21798953
AptaDB
DNA
GGTGGCTGTTGGTCGAGGCTTATTAGTGTAGTCAATGGAGGCAGGCGACG
CC1OC(OC2C(O)CC(OC3C(O)CC(OC4CCC5(C)C(CCC6C5CC(O)C5(C)C(C7=CC(=O)OC7)CCC65O)C4)OC3C)OC2C)CC(O)C1O
null
1
100 mM NaCl, 20 mM Tris-HCl (pH 7.6), 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2, and 0.02% Tween 20
23021809
AptaDB
DNA
TACTGGGCTGGGCTTGGATTAGATCACAGTGGAACATACAGGACACACG
CC1OC(OC2C(O)CC(OC3C(O)CC(OC4CCC5(C)C(CCC6C5CC(O)C5(C)C(C7=CC(=O)OC7)CCC65O)C4)OC3C)OC2C)CC(O)C1O
null
1
100 mM NaCl, 20 mM Tris-HCl (pH 7.6), 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2, and 0.02% Tween 20
23021809
AptaDB
DNA
GTCTCTGTGTGCGCCAGAGAACACTGGGGCAGATATGGGCCAGCACAGAATGAGGCCC
NCCc1ccc(O)c(O)c1
null
1
50 mM Tris-HCl (pH 7.4), 5 mM MgCl2, and 0.5 M or 0.15 M NaCl
9245404
AptaDB
DNA
GGGCGAGAACAGTGTCCCAGTCGCTAGTTTTCTCTGCCC
CC1c2cccc(O)c2C(O)=C2C(=O)C3(O)C(O)=C(C(N)=O)C(=O)C(N(C)C)C3C(O)C21
null
1
20 mM Tris at pH 7.5 with 100 mM NaCl, 2 mM MgCl2, 5 mM KCl and 1 mM CaCl2, RT
28634758
AptaDB
RNA
CUUGUCUGAACAAUUUCGUCUGCCUUUGCGUUCCGACGGC
CC1c2cccc(O)c2C(O)=C2C(=O)C3(O)C(O)=C(C(N)=O)C(=O)C(N(C)C)C3C(O)C21
null
1
20 mM Tris at pH 7.5 with 100 mM NaCl, 2 mM MgCl2, 5 mM KCl and 1 mM CaCl2, RT
28634758
AptaDB
DNA
TCCTGACCTTAGCCTATGTTTTCTCTACCGGCTATGTTAC
CC1c2cccc(O)c2C(O)=C2C(=O)C3(O)C(O)=C(C(N)=O)C(=O)C(N(C)C)C3C(O)C21
null
1
20 mM Tris at pH 7.5 with 100 mM NaCl, 2 mM MgCl2, 5 mM KCl and 1 mM CaCl2, RT
28634758
AptaDB
RNA
CUUCUUAAUCCUAAAGUCCCUGGUGUUUCUCUGCGUGGGG
CC1c2cccc(O)c2C(O)=C2C(=O)C3(O)C(O)=C(C(N)=O)C(=O)C(N(C)C)C3C(O)C21
null
1
20 mM Tris at pH 7.5 with 100 mM NaCl, 2 mM MgCl2, 5 mM KCl and 1 mM CaCl2, RT
28634758
AptaDB
RNA
CGGUUGGAUGGGUGUUGGUGGUUUGUUGAGUCCAGGCGGC
CC1c2cccc(O)c2C(O)=C2C(=O)C3(O)C(O)=C(C(N)=O)C(=O)C(N(C)C)C3C(O)C21
null
1
20 mM Tris at pH 7.5 with 100 mM NaCl, 2 mM MgCl2, 5 mM KCl and 1 mM CaCl2, RT
28634758
AptaDB
DNA
CTCCTTCAACGAAGTGGGTCTCCTTCAACGAAGTGGGTCTC
COC(=O)C1C(OC(=O)c2ccccc2)CC2CCC1N2C
null
1
10% saliva in 10 mM Tris, 0.1 mM MgCl2, pH 7.4
28451157
AptaDB
DNA
TGAGGCGGGTGGGTGGGTTGAATATGCTGATTACCCCATCGGAGAACGTTAAGGCGCTTC
NCCO
null
1
100 mM NaCl, 20 mM Tris/HCl (pH 7.6), 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2, 0.02% Tween 20
16289104
AptaDB
DNA
TGAGGCGGGTGGGTGGGTTGAATACGCTGATCACCCCATCGGAGAACGTTAAGGCGCTTT
NCCO
null
1
100 mM NaCl, 20 mM Tris/HCl (pH 7.6), 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2, 0.02% Tween 20
16289104
AptaDB
DNA
GCTGCGAGGTGGGTGGGTGGGAGCAATTGGTCCTCGCTTAGCTTCTACGGTGGGCTATCT
NCCO
null
1
100 mM NaCl, 20 mM Tris/HCl (pH 7.6), 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2, 0.02% Tween 20
16289104
AptaDB
DNA
GCTGTGAGGTGGGTGGGTGGGAGCAATTGGTCCTCGCTTAGCTTCTACGGTGGGCTATCT
NCCO
null
1
100 mM NaCl, 20 mM Tris/HCl (pH 7.6), 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2, 0.02% Tween 20
16289104
AptaDB
DNA
GCTGCGAGGTGGGTGGGTGGGAGCAATTGGTCCTTGCTTAGCTTCTACGGTGGGCTATCT
NCCO
null
1
100 mM NaCl, 20 mM Tris/HCl (pH 7.6), 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2, 0.02% Tween 20
16289104
AptaDB
RNA
GGGCGACCCUGAUGAGCCUUAGGAUAUGCUUCGGCAGAAGGACGUCGAAACGGUGAAAGCCGUAGGUUGCCC
Cc1cc2nc3c(=O)nc([O-])nc-3n(CC(O)C(O)C(O)COP(=O)([O-])[O-])c2cc1C
null
1
50 mM Tris-HCl (pH 7.5) and 20 mM MgCl2
10097080
AptaDB
DNA
AATCGCATTACCTTATACCAGCTTATTCAATTACGTCTGCACATACCAGCTTATTCAATT
CCCCC(C)C(OC(=O)CC(CC(=O)O)C(=O)O)C(CC(C)CC(O)CCCCC(O)CC(O)C(C)N)OC(=O)CC(CC(=O)O)C(=O)O
null
1
100 mM NaCl, 20 mM Tris, 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2, pH 7.6 incubate with target for 60 minutes
21614178
AptaDB
RNA
GGGAGAAGGCGGCGCGUAGGCGAGCUUUAGGCCCGACAUUCCCCUAAAAAAGCUUGUUCUAUUCGUGGACGAUGCGCAC
CNC(C)C1CCC(N)C(OC2C(N)CC(N)C(OC3OCC(C)(O)C(NC)C3O)C2O)O1
null
1
PBS with 10% (v/v) methanol
22793869
AptaDB
RNA
GGGAGAAGGCGGCGCGUAGGCGAGCUUUACCAGUUUUAUUUGUUUUAUUGUUAUAUGCUUAUUCGUGGACGAUGCGCAC
CNC(C)C1CCC(N)C(OC2C(N)CC(N)C(OC3OCC(C)(O)C(NC)C3O)C2O)O1
null
1
PBS with 10% (v/v) methanol
22793869
AptaDB
DNA
TTCTTTCTTCCCCTTGTTTGTT
[Hg+2]
null
1
pH 7.0, 20 mM NaNO3, 8 mM Tris nitrate, 100 ¶ÃM NaCN, 25 °Ê
22936101
AptaDB
DNA
AAGCTTGCTTTATAGCCTGCAGCGATTCTTGATCGGAAAAGGCTGAGAGCTACGC
COP(N)(=S)Oc1ccccc1C(=O)OC(C)C
null
1
300 mM NaCl, 50 mM KCl, 10 mM MgCl2, 50 mM Tris/HCl, and pH 8.3
22261866
AptaDB
DNA
AAGCTTTTTTGACTGACTGCAGCGATTCTTGATCGCCACGGTCTGGAAAAAGAG
COP(N)(=S)Oc1ccccc1C(=O)OC(C)C
null
1
300 mM NaCl, 50 mM KCl, 10 mM MgCl2, 50 mM Tris/HCl, and pH 8.3
22261866
AptaDB
DNA
ATCCGTCACACCTGCTCTATACACATTGTGTTTACTCCCAGTTTTTTAGACTTATGGTGTTGGCTCCCGTAT
COc1cc2c(c3oc(=O)c4c(c13)CCC4=O)C1C=COC1O2
null
1
20 mM Tris-HCl, 100 mM NaCl, 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2
24984866
AptaDB
RNA
GGGAAUGGAUCCACAUCUACGAAUUCACCGCGGGGUUGCGGACCGGGAGCUCCAGCUUCACUGCAGACUUGACGAAGCUU
NCC1OC(OC2C(N)CC(N)C(OC3OC(CO)C(O)C(N)C3O)C2O)C(O)C(O)C1O
null
1
500 mM NaCl, 50 mM Tris (pH 7.6)
9383431
AptaDB
RNA
GGGAGAAGGCGGCGCGUAGGCGAGCUUUAGGCCCGACAUUCCCCUAAAAAAGCUUGUUCUAUUCGUGGACGAUGCGCAC
NCC1OC(OC2C(N)CC(N)C(OC3OC(CO)C(O)C(N)C3O)C2O)C(O)C(O)C1O
null
1
PBS with 10% (v/v) methanol
22793869
AptaDB
RNA
GGGAGAAGGCGGCGCGUAGGCGAGCUUUACCAGUUUUAUUUGUUUUAUUGUUAUAUGCUUAUUCGUGGACGAUGCGCAC
NCC1OC(OC2C(N)CC(N)C(OC3OC(CO)C(O)C(N)C3O)C2O)C(O)C(O)C1O
null
1
PBS with 10% (v/v) methanol
22793869
AptaDB
RNA
GGGAAUGGAUCCACAUCUACGAAUUCGAAUUGCCGUAAUUUCCCGUGGAGCGAUGCUUCACUGCAGACUUGACGAAGCUU
NCC1OC(OC2C(N)CC(N)C(OC3OC(CO)C(O)C(N)C3O)C2O)C(O)C(O)C1O
null
1
500 mM NaCl, 50 mM Tris (pH 7.6)
9383431
AptaDB
DNA
ATACCAGCTTATTCAATTCAGGGCGGTATGAGGCTCGATCAAGGTCGGAGCGAGAATTTTTTCGCGGAGTCGGCTGGATCAGATAGTAAGTGCAATCT
NCC1OC(OC2C(N)CC(N)C(OC3OC(CO)C(O)C(N)C3O)C2O)C(O)C(O)C1O
null
1
100 mM NaCl, 20 mM Tris-HCl pH 7.6, 2 mM MgCl2, 5 mM KCl, and 1 mM CaCl2
23326761
AptaDB
DNA
ATACCAGCTTATTCAATTGGTGGTAGGATGGGCTCGATCGAGGTCTTCAGTCGGCTCGGTTTAGTTTATGTTCTCCTGTAGATAGTAAGTGCAATCT
NCC1OC(OC2C(N)CC(N)C(OC3OC(CO)C(O)C(N)C3O)C2O)C(O)C(O)C1O
null
1
100 mM NaCl, 20 mM Tris-HCl pH 7.6, 2 mM MgCl2, 5 mM KCl, and 1 mM CaCl2
23326761
AptaDB
DNA
ATACCAGCTTATTCAATTATGCGGGGATGAGGCTTGATCTGTGGCTCTGATCCATGATCAGTCGTCTTACGTGCGGTCCAGATAGTAAGTGCAATCT
NCC1OC(OC2C(N)CC(N)C(OC3OC(CO)C(O)C(N)C3O)C2O)C(O)C(O)C1O
null
1
100 mM NaCl, 20 mM Tris-HCl pH 7.6, 2 mM MgCl2, 5 mM KCl, and 1 mM CaCl2
23326761
AptaDB
DNA
ATACCAGCTTATTCAATTAGCCCGGTATTGAGGTCGATCTCTTATCCTATGGCTTGTCCCCCATGGCTCGGTTATATCCAGATAGTAAGTGCAATCT
NCC1OC(OC2C(N)CC(N)C(OC3OC(CO)C(O)C(N)C3O)C2O)C(O)C(O)C1O
null
1
100 mM NaCl, 20 mM Tris-HCl pH 7.6, 2 mM MgCl2, 5 mM KCl, and 1 mM CaCl2
23326761
AptaDB
DNA
TGGGGGTTGAGGCTAAGCCGA
NCC1OC(OC2C(N)CC(N)C(OC3OC(CO)C(O)C(N)C3O)C2O)C(N)C(O)C1O
null
1
20 mM Tris-HCl, 50 mM NaCl, 5 mM KCl, 5 mM MgCl2, pH 8.0
21530479
AptaDB
DNA
ATCCGTCACACCTGCTCTCACGTCCGTCAACCAGATTGATACTTTATCTTGTTGTGGTGTTGGCTCCCGTAT
COc1cc2c(c3oc(=O)c4c(c13)CCC4=O)C1C=COC1O2
null
1
20 mM Tris-HCl, 100 mM NaCl, 2 mM MgCl2, 5 mM KCl, 1 mM CaCl2
24984866
AptaDB
RNA
CUGACGUUUCGAACGUCAAAUGCGGAAGUUGUCGGAGCUAAGAAACGGGUAAUGAUGCCGUUGAUGUGAAGGCGGGCUCA
NC(Cc1ccccc1)C(=O)O
null
1
50 mM Hepes (pH 7.0), 0.3 M NaCl, 5 mM CaCl2, and 5 mM MgCl2
11847556
AptaDB
DNA
GACCAGGGCAAACGGTAGGGAGTGGTC
NC(N)=NCCCC(N)C(=O)O
null
1
10 mM sodium phosphate buffer (pH 7.5) and 100 mM NaCl
8846773
AptaDB
DNA
GGGATCGAAACGTAGCGCCTTCGATCCC
NC(N)=NCCCC(N)C(=O)O
null
1
10 mM sodium phosphate buffer (pH 7.5) and 100 mM NaCl
8846773
AptaDB
RNA
GGCAUCGGAAAGUGGGUUGAUGUAAGUAACAGGCGAUGCC
NC(Cc1cnc[nH]1)C(=O)O
null
1
50 mM Hepes (pH 7.0), 250 mM NaCl, 5 mM each CaCl2 and MgCl2, and 1 mM glycine
15999244
AptaDB
RNA
GGUCUUACGUCGUUCGCGACUAUUGGGAGACC
CCC(C)C(N)C(=O)O
null
1
10 mM HEPES (pH 7.0), 300 mM NaCl, and 7.5 mM MgCl2 (buffer B) and 0.1 mM each of ZnCl2, CaCl2, and MnCl2 and 0.01 mM CuCl
9630252
AptaDB
RNA
CUGGACGACGGGGACGCCACUGGACUAGGUAAGCCAGGACCGUACGUCGGGAGCCGUCAGAAUA
NC(Cc1c[nH]c2ccccc12)C(=O)O
null
1
50 mM HEPES (pH 7.0), 250 mM NaCl, 5 mM MgCl2, 5 mM CaCl2, 5 mM glycine
16186130
AptaDB
DNA
TGGAGCTTGGATTGATGTGGTGTGTGAGTGCGGTGCCC
NC(=O)C(N)Cc1ccc(O)cc1
null
1
20 mM Tris (pH 7.6), 300 mM NaCl, 5 mM MgCl2
11557341
AptaDB
DNA
GCACACCGATGGCGGTCCTGTTTAGGGGGTGTGC
Nc1nc(N)nc(N)n1
null
1
Cyanuric acid, Ammeline, Ammelide
27171923
AptaDB
DNA
GCACACCGATGGCGGTCCTGTTTAGGGGGTGTGCGTG
Nc1nc(N)nc(N)n1
null
1
Cyanuric acid, Ammeline, Ammelide
27171923
AptaDB
DNA
GCACACCGATGGCGGTCCTGTTTAGGGGGTGTGCGTGGGGAGGTGCGGTTGC
Nc1nc(N)nc(N)n1
null
1
Cyanuric acid, Ammeline, Ammelide
27171923
AptaDB
DNA
CCTGCACCTCGTCCAGCATGCACACCGATGGCGGTCCTGTTTAGGGGGTGTGCGTG
Nc1nc(N)nc(N)n1
null
1
Cyanuric acid, Ammeline, Ammelide
27171923
AptaDB
DNA
CCTGCACCTCGTCCAGCATGCACACCGATGGCGGTCCTGGCAGGGGGTGTGCGTG
Nc1nc(N)nc(N)n1
null
1
Cyanuric acid, Ammeline, Ammelide
27171923
AptaDB
DNA
CCTGCACCTCGTCCAGCATCCGATGGCGGTCCTGTTTTACGGTAGCTTATATGCAGGGGGGTG
Nc1nc(N)nc(N)n1
null
1
Cyanuric acid, Ammeline, Ammelide
27171923
AptaDB
DNA
GCACACCGATGGCGGTCCTGTTTTACGGTAGCTTATATGCAGGGGGTGTGCGTG
Nc1nc(N)nc(N)n1
null
1
Cyanuric acid, Ammeline, Ammelide
27171923
AptaDB
DNA
CCTGCACCTCGTCCAGCATGCACACCGATGGCGGTCCTGTTTTACGGTAGCTTATATGCAGGGGGTGTGCGTG
Nc1nc(N)nc(N)n1
null
1
Cyanuric acid, Ammeline, Ammelide
27171923
AptaDB
DNA
GCACACCGATGGCGGTCCTGTTTTACGGTAGCTTATATGCAGGGGGTGTGCGTGGGGAGGTGCGGTTGC
Nc1nc(N)nc(N)n1
null
1
Cyanuric acid, Ammeline, Ammelide
27171923
AptaDB
DNA
CCTGCACCTCGTCCAGCATGCACACCGATGGCGGTCCTGTTTTACGGTAGCTTATATGCAGGGGGTGTGCGTGGGGAGGTGCGGTTGC
Nc1nc(N)nc(N)n1
null
1
Cyanuric acid, Ammeline, Ammelide
27171923
AptaDB
RNA
CUGCGAUCAGGGGUAAAUUUCCGCGCAGGCUCCACGCCGC
Cc1cc(Cc2ccc(N)c(C)c2)ccc1N
null
1
250 mM NaCl, 50 mM Tris-HCl, 5 mM MgCl2
14706642
AptaDB
RNA
CAGAGGGAGUACUGAUCAACCCGAGCCUUCCGUCCCUGAG
Cc1cc(Cc2ccc(N)c(C)c2)ccc1N
null
1
250 mM NaCl, 50 mM Tris-HCl, 5 mM MgCl2
14706642
AptaDB
RNA
UGGGAGGAGUGCUGCUCUCCAGGCACUCUUGUUGCUCGGA
Cc1cc(Cc2ccc(N)c(C)c2)ccc1N
null
1
250 mM NaCl, 50 mM Tris-HCl, 5 mM MgCl2
14706642
AptaDB
RNA
GGAUAAUAGCCGUAGGUUGCGAAAGCGACCCUGAUGAGAAAGCCAAAGCCGUAGCGCAGAUGAUCUCGCCAUCAGUACCGAAACGGUAGCGAGAGCUC
[Mn]
null
1
50 mM Tris-HCl, pH 7.5, 20 mM MgCl2
11283591
AptaDB
DNA
GCGGCGGTACCAGGTCAAAGGTGGGTGAGGGGACGCCAAGAGTCCCCGCGGTTACATAGAG
[Na]
null
1
12.5 mM Hepes (pH 7.4), 140 mM NaCl, 10 mM glucose, 1.2 mM MgCl2, and 1 mM CaCl2
25918425
AptaDB
RNA
GGAACCCAACUAGGCGUUUGAGGGGAUUCGGCCACGGUAACAACCCCUC
NC(=O)C1=CN(C2OC(COP(=O)(O)OP(=O)(O)OCC3OC(n4cnc5c(N)ncnc54)C(O)C3O)C(O)C2O)C=CC1
null
1
20 mM HEPES (pH 7.5), 300 mM KC1, and 5 mM MgC12 at room temperature
11539282
AptaDB
RNA
GGAACCCAACUAGGCGUUUGAGGGGAUUCGGCCACGGUAACAACCCCUC
NC(=O)c1ccc[n+](C2OC(COP(=O)([O-])OP(=O)(O)OCC3OC(n4cnc5c(N)ncnc54)C(O)C3O)C(O)C2O)c1
null
1
20 mM HEPES (pH 7.5), 300 mM KC1, and 5 mM MgC12 at room temperature
11539282
AptaDB
RNA
GGGAGAAGGCGGCGCGUAGGCGAGCUUUAGGCCCGACAUUCCCCUAAAAAAGCUUGUUCUAUUCGUGGACGAUGCGCAC
NCC1OC(OC2C(CO)OC(OC3C(O)C(N)CC(N)C3OC3OC(CN)C(O)C(O)C3N)C2O)C(N)C(O)C1O
null
1
PBS with 10% (v/v) methanol
22793869
AptaDB
RNA
GGGAGAAGGCGGCGCGUAGGCGAGCUUUACCAGUUUUAUUUGUUUUAUUGUUAUAUGCUUAUUCGUGGACGAUGCGCAC
NCC1OC(OC2C(CO)OC(OC3C(O)C(N)CC(N)C3OC3OC(CN)C(O)C(O)C3N)C2O)C(N)C(O)C1O
null
1
PBS with 10% (v/v) methanol
22793869
AptaDB
RNA
GGGAGAGGAUACUACACGUGGAAAAACCAACAAAUUGGGAAAAAUGUUAAGGGUCCACUUCAUGCCAUUGCAUGUAGCAGAAGCUUCCG
[Ni]
null
1
50 mM NaCl, 7 mM MgCl2, 50 mM Tris-HCl (pH 7.5)
9409620
AptaDB