| | --- |
| | language: |
| | - de |
| | bigbio_language: |
| | - German |
| | multilinguality: monolingual |
| | pretty_name: GGPONC2 |
| | homepage: https://www.leitlinienprogramm-onkologie.de/projekte/ggponc-english/ |
| | bigbio_pubmed: false |
| | bigbio_public: flase |
| | bigbio_tasks: |
| | - NAMED_ENTITY_RECOGNITION |
| | --- |
| | |
| |
|
| | # Dataset Card for GGPONC2 |
| |
|
| | ## Dataset Description |
| |
|
| | - **Homepage:** https://www.leitlinienprogramm-onkologie.de/projekte/ggponc-english/ |
| | - **Pubmed:** False |
| | - **Public:** False |
| | - **Tasks:** NER |
| |
|
| |
|
| | The GGPONC project aims to provide a freely distributable corpus of German medical text for NLP researchers. |
| | Clinical guidelines are particularly suitable to create such corpora, as they contain no protected health information |
| | (PHI), which distinguishes them from other kinds of medical text. |
| |
|
| | The second version of the corpus (GGPONC 2.0) consists of 30 German oncology guidelines with 1.87 million tokens. |
| | It has been completely manually annotated on the entity level by 7 medical students using the INCEpTION platform over a |
| | time frame of 6 months in more than 1200 hours of work. This makes GGPONC 2.0 the largest annotated, freely |
| | distributable corpus of German medical text at the moment. |
| |
|
| | Annotated entities are Findings (Diagnosis / Pathology, Other Finding), Substances (Clinical Drug, Nutrients / Body |
| | Substances, External Substances) and Procedures (Therapeutic, Diagnostic), as well as Specifications for these entities. |
| | In total, annotators have created more than 200000 entity annotations. In addition, fragment relationships have been |
| | annotated to explicitly indicate elliptical coordinated noun phrases, a common phenomenon in German text. |
| |
|
| | ## Citation Information |
| |
|
| | ``` |
| | @inproceedings{borchert-etal-2022-ggponc, |
| | title = "{GGPONC} 2.0 - The {G}erman Clinical Guideline Corpus for Oncology: Curation Workflow, Annotation Policy, Baseline {NER} Taggers", |
| | author = "Borchert, Florian and |
| | Lohr, Christina and |
| | Modersohn, Luise and |
| | Witt, Jonas and |
| | Langer, Thomas and |
| | Follmann, Markus and |
| | Gietzelt, Matthias and |
| | Arnrich, Bert and |
| | Hahn, Udo and |
| | Schapranow, Matthieu-P.", |
| | booktitle = "Proceedings of the Thirteenth Language Resources and Evaluation Conference", |
| | month = jun, |
| | year = "2022", |
| | address = "Marseille, France", |
| | publisher = "European Language Resources Association", |
| | url = "https://aclanthology.org/2022.lrec-1.389", |
| | pages = "3650--3660", |
| | } |
| | ``` |
| |
|
