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def get_last_price_date(con, table, ticker_id): """ INPUTS: con (mysql) - pymysql database connection table (str) - Database table to query ticker_id (int) - Ticker id number from symbols table OUTPUT: Last price date in ticker's time series. Iso8601 standard format """ ...
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import base64 import hashlib def get_unique_username_from_email(email): """ Uniquely generate our 'username' by taking the email and create a hash. Source: https://github.com/dabapps/django-email-as-username/blob/master/emailusernames/utils.py """ email = email.lower() # Emails should be case-ins...
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def maxlen(stringlist): """returns the length of the longest string in the string list""" maxlen = 0 for x in stringlist: if len(x) > maxlen: maxlen = len(x) return maxlen
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def _get_encoded_list(items): """Return Python list encoded in a string""" return '[' + ', '.join(['\'%s\'' % (item) for item in items]) + ']' \ if items else '[]'
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def split_paragraphs(text, min_length=30): """Extract a list of paragraphs from text Return a list of strings. Paragraphs are separated by double "new-line" characters. Any paragraph shorter than min_length is dropped. Any whitespaces at the beginning or ending of paragraphs are trimmed. """ ...
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def _calc_ts_complexity(tss, pers): """ Calculates the complexity of a TS schema Complexity = (Number of Schemas + Number of Permutable Symbols + Lenght of each Permutable Symbol) """ return len(tss) + sum([len(per) for ts, per in zip(tss, pers)])
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from typing import List from typing import Tuple from typing import Set def get_inf_req(triple_list: List[tuple]) -> Tuple[Set[tuple], Set[tuple]]: """Save request type and inform type results respectively according to slot type. Args: triple_list: preds or ground truth (domain, slot, value) Ret...
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def convert_bits_to_bytes(bit_value): """ Convert input bits to bytes """ return bit_value / 8
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import textwrap def WrapText(Text, Delimiter, Width): """Wrap text using specified delimiter and width. Arguments: Text (string): Input text Delimiter (string): Delimiter for wrapping text Width (int): Max number of characters before wrapping text Returns: str : Wrapp...
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def check_valid_sequence(sequence: str) -> bool: """ Check that the sequence string only contains valid sequence characters """ return set(sequence.upper()).issubset(set("WSKMYRVHDBNZNATCGU-"))
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def dot2(bits): """Compute dot module 2.""" return (bits[0] * bits[2] + bits[1] * bits[3]) % 2
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import base64 import json def decode_base64(data): """ decodes from base64. :param string data: :return: dict object. """ to_bytes = base64.b64decode(data) return json.loads(to_bytes)
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from typing import Any def static_vars(obj: Any): """ Like :func:`vars`, but bypasses overridden ``__getattribute__`` methods. :param obj: Any object :return: The object's ``__dict__`` :raises TypeError: If the object has no ``__dict__`` """ try: return object.__getattribute__(obj...
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import torch def _accuracy_within_margin(score_predictions, score_target, margin, device): """ Returns the percentage of predicted scores that are within the provided margin from the target score. """ return torch.sum( torch.where( torch.abs(score_predictions - score_target) <= margin, ...
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def string_is_true(value): """Check to see if a string has a value that should be treated as True.""" return value and value != 'false' and value != 'False' and value != '0'
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def get_cooling_duty(heat_utilities, filter_savings=True): """Return the total cooling duty of all heat utilities in GJ/hr.""" return - sum([i.duty for i in heat_utilities if i.flow * i.duty < 0]) / 1e6
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def get_pub_type(poa_article): """ Given an article object, determine whether the pub_type is for PoA article or VoR article """ pub_type = None if poa_article.is_poa is True: # PoA pub_type = "aheadofprint" else: # VoR pub_type = "epublish" return pub_typ...
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import torch def build_align_pharaoh(valid_alignment): """Convert valid alignment matrix to i-j (from 0) Pharaoh format pairs, or empty list if it's None. """ align_pairs = [] if isinstance(valid_alignment, torch.Tensor): tgt_align_src_id = valid_alignment.argmax(dim=-1) for tgt_i...
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def shuffle_rows(df): """ Shuffle the rows of a dataframe see https://stackoverflow.com/questions/29576430/shuffle-dataframe-rows """ return df.sample(frac=1).reset_index(drop=True)
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from typing import Union def change_message_from_percent(percent_change: Union[str, int, float]) -> str: """Creates a change message from given percentage change. percent_change will be: - "–" in case the last data point was missing or both the points had values 0 - 0 (int) in case there was ...
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def load_smi(smi_file,index=None): """ loads list of smiles from a text file. Will return the i-th smiles in file if index is provided, where index starts at zero. Parameters ---------- smi_file : str file name containing strings index : None or int, default None index of sm...
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import math def Volume(diameter, factor=4*math.pi/3): """Converts a diameter to a volume. V = 4/3 pi (d/2)^3 """ return factor * (diameter/2.0)**3
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import random def shuffle(data): """ Shuffles the Array """ random.shuffle(data) return data
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def get_index_of_smallest(lst: list, i: int) -> int: """ Return the index <i> of the smallest item in lst[i:]. >>> get_index_of_smallest([2, 7, 3, 5], 1) 2 """ # Index of the smallest item so far index_of_smallest = i len_lst = len(lst) for j in range(i + 1, len_lst): if lst[j...
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def desc2fn(description: tuple) -> tuple: """Extract tuple of field names from psycopg2 cursor.description.""" return tuple(d.name for d in description)
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from typing import Counter def is_anagram_counter(s, t): """ Determine whether or not teo given strings are anagram by counter :param s: source string :type s: str :param t: target string :type t: str :return: whether or not teo given strings are anagram :rtype: bool """ retur...
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def dates_to_strs(col): """ Converts all DataFrame Series of datetime types to strings. """ if str(col.dtype).startswith("date"): return col.astype(str) return col
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def coco_label_reader(FILEPATH): """ parse a label map file and return a dictionary label map has entries like this: item { name: "" id: 0 display_name: "" } :param FILEPATH: path to the label map :return: label dictionary """ mapping = {} with open(FILEPA...
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def calc_map_dims(x_size, y_size, mp_size, mp_dpi): """ Calculate output map size. :param x_size: <int or float> Image x dimension :param y_size: <int or float> Image y dimension :param mp_size: <int> Percent of image space of which the map will occupy :param mp_dpi: <int> Map density, as dots ...
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import socket def get_fqdn(ip_address): """ Function that transforms a given IP address into the associated FQDN name for that host. :param ip_address: IP address of the remote host. :return: FQDN name for that host. """ return socket.gethostbyaddr(ip_address)
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import torch def classify_action_with_tsn_bni(input, settings, num_crops=None, n_samples=None, average_scores=True): """ Test routine for tsn bni, for a single action :param input: Pytorch variable containing image values :param settings: dictionary settings :param num_crops: number of crops (sho...
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def _reshape_list_to_2d(list_to_reshape, shapes): """Reshape list of numpy.ndarray according to list of shapes. Args: list_to_reshape (list): List containing numpy.ndarray's. shapes (list): List of 2-dimensional shape tuples. Returns: reshaped (list): List containing the reshaped n...
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def strip_query(url): """Remove query string from a url""" return url.split('?', 1)[0]
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def split_line(line, min_line_length=30, max_line_length=100): """ This is designed to work with prettified output from Beautiful Soup which indents with a single space. :param line: The line to split :param min_line_length: The minimum desired line length :param max_line_length: The maximum desire...
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def Top1Criterion(x,y, model): """Returns True if model prediction is in top1""" return model(x).topk(1)[1].view(-1)==y
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import collections def get_ngram_counter(ids, n): """Get a Counter with the ngrams of the given ID list. Args: ids: np.array or a list corresponding to a single sentence n: n-gram size Returns: collections.Counter with ID tuples as keys and 1s as values. """ ngram_list = [tuple(ids[i:i + n]) f...
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import random import math def define_e(phi_n: int) -> int: """Generates a number that is between 1 < e < phi_n and checks if it is coprime with phi_n Args: phi_n (int): A value generated using the original prime numbers that is "(p - 1) * (q - 1)" Returns: int: A value that satisfies the...
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def path2ScriptId(path): """Answers the scriptId, derived from the __file__ of the main source.""" return path.split('/src/')[-1]
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import json def dejsonize(data): """ Returns JSON deserialized data >>> dejsonize('{\\n "foo": "bar"\\n}') {u'foo': u'bar'} """ return json.loads(data)
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def have_module(name): """ Check whether a Python module named ``name`` can be imported. This is done by trying to import that module and returning ``True`` if that import succeeded. So, as a side effect, the module is actually imported if possible. EXAMPLES:: sage: from sage_setup.ut...
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def inside_angle_range(x, start, end, tol=0.0): """Assuming end is clockwise from start, is the angle x inside [start,end] within some tolerance? Parameters: x (float): angle to test, in degrees start (float): start angle of range, in degrees end (float): end angle of range, in degr...
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def _from_serialized_headers(headers): """ httpx accepts headers as list of tuples of header key and value. """ header_list = [] for key, values in headers.items(): for v in values: header_list.append((key, v)) return header_list
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def mergeDict(source, target): """Merges the source dictionary into the target one, keeping values for duplicate keys from the target dictionary. Keys that don't exist in 1 or the other are left untouched but are still copied over to the resulting dictionary. Args: source (dict): The initial dictionary target...
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import random def random_walk(G, path_length, alpha=0, rand=random.Random(), start=None): """ Returns a truncated random walk. path_length: Length of the random walk. alpha: probability of restarts. start: the start node of the random walk. """ if start: path = [start] else: path = [rand.choice(list(G.n...
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import re def json_path_filter(arg): """Parse a JSON filter argument.""" key, sep, value = arg.strip().partition('~') if sep == '~': return key, re.compile(value) key, sep, value = arg.strip().rpartition('=') return key, int(value)
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def first(iterator, default=None): """Return first member of an `iterator` Example: >>> def it(): ... yield 1 ... yield 2 ... yield 3 ... >>> first(it()) 1 """ return next(iterator, default)
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import torch def precision_k(labels, scores, k=5, average=False, largest=False): """ Computes the precision@k for the specified values of k or average precision@k if attribute average is True :param labels: pytorch.Tensor of shape (n,) containing labels of each value :param scores: pytorch.Tensor ...
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def convert_to_seconds(val, t): """ Convert a given unit of time to seconds Args: val (int): Value in number of years/days/minutes t (str): Specifies the type of value. It can be one of the following 'y': Val denotes years 'd': Val denotes days ...
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def is_latex_card(card): """Should the current card be formatted in latex?""" return 'latex' in [tag.name for tag in card.tags]
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import socket def is_ip(s): """Returns whether or not a given string is an IPV4 address.""" try: return bool(socket.inet_aton(s)) except socket.error: return False
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def _pretty_class(s): """ convert the internal class name representation into what users expect to see. Currently that just means swapping '/' for '.' """ # well that's easy. return str(s).replace("/", ".")
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def __is_reflection_coord(coord): """Reflection coordinates have a 2 followed by 0 or more trailing 1s.""" i = len(coord)-1 while coord[i] == 1: i -= 1 return coord[i] == 2
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def chrom_sort(in_chroms): """ Sort a list of chromosomes in the order 1..22, X, Y, M. :param list in_chroms: Input chromsomes :return: Sorted chromosomes :rtype: list[str] """ if not in_chroms: return in_chroms chr_prefix = False if in_chroms[0].startswith('chr'): i...
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def convert_val_to_time(val): """Try to convert value to date & time in ISO-8601 format or None. Format must include time zone information like '2014-11-06T19:00:02-0500'. Supported types are: - NoneType - str. """ if val is None: return None elif isinstance(val, str): ...
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import math def textrank_sent_sim(s1, s2): """ Arguments --------- s1, s2 : list of str Tokenized sentences Returns ------- Sentence similarity : float Non-negative number """ n1 = len(s1) n2 = len(s2) if (n1 <= 1) or (n2 <= 1): return 0 common ...
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def drop_table_clause(table_name): """ Create a drop table if exists clause string for SQL. Args: table_name: The table to be dropped. Returns: A string with the crafted clause. """ return 'DROP TABLE IF EXISTS {}'.format(table_name)
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def _extract_stack_info(stack): """ Given a stack, save the static info for each frame (basically everything except for the reference to the frame). """ stack_info = [] for frame in stack: stack_info.append(frame[1:]) return stack_info
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def _b_min_ ( bp ) : """Get min values for bernstein polynomials >>> p = ... >>> mn = p.min() The value is such that: mn <= p(x) for all x_min<=x<x_max """ b = bp.bernstein() pars = b .pars() return min ( pars )
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def strict_neg(a): """Strict negation Arguments: - `a`: a boolean """ return not a
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def str_to_span(string): """ Return the equivalent interval time in seconds. Parameters ---------- string : str Time periodicity Returns ------- span : int Number of seconds in time interval. Examples -------- >>> str_to_span('minutely') 60 """ if ...
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def get_index_of_most_important_sentences(weighted_sums, num_vectors): """ Finds and returns the index of the two sentences with the highest weighted sum """ largest_sum_index, second_largest_sum_index = 0, 0 largest_sum, second_largest_sum = 0, 0 for i in range(num_vectors): current_sum = weigh...
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from typing import List def _bucket(number: float, bucket_boundaries: List[float]) -> int: """Returns an int representing a bucket for the number.""" for index, (left, right) in enumerate(zip(bucket_boundaries, bucket_boundaries[1:])): if left <= number < right: ...
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def _getWordCategory(word, words_category_index): """ Retrieves the category of a word :param word: :param words_category_index: :return: """ if word in words_category_index: return words_category_index[word] else: return None
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def transformBelowValue(requestContext, seriesList, valueLimit, newValue): """ Takes one metric or a wildcard seriesList. For every point below (valueLimit), replace it with (newValue). Does nothing to NULLs """ for series in seriesList: series.tags['transformBelowValue'] = valueLimit ...
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def calculate_intersect(a, b, dist): """ Calculate the count of destinations from the official and the OSM dataset that intersect with different buffer. Parameters ---------- a : geopandas.GeoDataFrame the osm or offical destinations b : geopandas.GeoDataFrame the osm or offical...
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def rank_by_order(df, groupby_columns): """Uses 1-based ranking, like `df.groupby(..).rank()`. """ return (df .groupby(groupby_columns).cumcount() .pipe(lambda x: list(x + 1)) )
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def _spherical_harmonics_l2(xyz, m): """Compute the l=2 Spherical Harmonics Args: xyz : array (Nbatch,Nelec,Nrbf,Ndim) x,y,z, of (Point - Center) m : second quantum number (-2,-1,0,1,2) Returns Y2-2 = 1/2\sqrt(15/\pi) xy/r^2 Y2-1 = 1/2\sqrt(15/\pi) yz/r^2 Y20 = 1/4\s...
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def sphinpq(phi2, phinot, ql, phinoopt=0.2, fmf0=4.88): """Calculate S~PhiNPQ S~PhiNPQ = 1 - ((phi2 * 1 / (1 + phi2 * (1/phinoopt - 1/phinot) / (ql * fmf0) ))+fmf0) :param phi2: Phi2 :param phinot: PhiNOt :param ql: qL :param phinoopt: Optimum PhiNO (default: 0.2) :param fmf0: Fv/Fm (defau...
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def sort_solution(sol): """ Sort a solution to an equation by the variable names. """ return tuple(sorted(sol, key=lambda e: str(e.lhs())))
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import random def roulette_wheel_selection(population): """ A random number between 0 and the total fitness score of all the genomes in a population is chosen (a point with a slice of a roulette wheel). The code iterates through the genomes adding up the fitness scores. When the subtotal is greate...
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from typing import Iterable def combine_encoders(name: str, encoders: Iterable[type]) -> type: """Combine several Encoders to a new one. Use this e.g. as >>> DataclassAndNumpy = combine_encoders('DataclassAndNumpy', ... (DataclassEncoder, Nump...
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import boto.ec2 def get_instances(stack_name, aws_config): """Get the IP addresses of all instances in a CloudFormation stack.""" conn = boto.ec2.connect_to_region( aws_config['ec2_region'], aws_access_key_id=aws_config['ec2_access_key'], aws_secret_access_key=aws_config['ec2_secret_ke...
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import torch def create_avg_image_from_mosaic_dataset(mosaic_dataset,labels,foreground_index,dataset_number): """ mosaic_dataset : mosaic_dataset contains 9 images 32 x 32 each as 1 data point labels : mosaic_dataset labels foreground_index : contains list of indexes where foreground image is present so that ...
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def filter_token_counts(counts, min_length=1): """ Given a list of (token, count) tuples, create a new list with only those tuples whose token is >= min_length. Arguments: counts (list of (str or unicode, int)): tuples of form (token, count). min_length (int): minimum length of ...
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import hashlib import base64 def make_digest(acc): # acc = "username:password" """ It make a digest for string acc :param acc: The `acc` string is in form: :return: a digest string. """ digest = hashlib.sha1(acc.encode()).digest() rst = base64.b64encode(digest).strip().decode() re...
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def get_dim_wind(self): """Get the two first dimension of the winding matrix Parameters ---------- self : Winding A Winding object Returns ------- (Nrad, Ntan): tuple Number of layer in radial and tangential direction """ return (1, 1)
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import jinja2 def create_html_template(template_path: str) -> jinja2.Template: """Read in the html template file and create a jinja2 template.""" with open(template_path) as f: return jinja2.Template(f.read())
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def is_fitted(estimator): """ Checks if a scikit-learn estimator/transformer has already been fit. Parameters ---------- estimator: scikit-learn estimator (e.g. RandomForestClassifier) or transformer (e.g. MinMaxScaler) object Returns ------- Boolean that indicates if ``estim...
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from pathlib import Path def read_long_description() -> str: """Read from README.md file in root of source directory.""" root = Path(__file__).resolve().parent readme = root / "README.md" return readme.read_text(encoding="utf-8")
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def modifyNote(note, front, back, tag): """ Modifies given note with given `front`, `back` and `tag`. If note with id is not found, do nothing. """ note.fields[0] = front note.fields[1] = back note.addTag(tag) note.flush() return note.id
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def to_listlist(list_dict): """Converts a list-of-dicts to a list-of-lists. Ex: [{'a': 1, 'b': 2}, {'a': 3, 'b': 4}] ---> [["a","b"],[1, 2],[3, 4]] Args: list_dict (<list<dict>>): A list of dictionaries. Ex: [{'a': 1, 'b': 2}, {'a': 3, 'b': 4}] Returns: <list<list>>: list-of-lists. Ex...
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import functools def tuplize(generator): """ Takes a generator and make it a tuple-returning function. As a side effect, it can also decorate any iterator-returning function to force return value to be a tuple. """ @functools.wraps(generator) def tuplized(*args, **kwargs): return tupl...
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def quadratic_fxn_fitness(params): """ This function is a wrapper for the environment, which takes a set of params and returns a reward. It is the function to be maximized, a.k.a. the fitness function or objective function. :param params: a 1D numpy array of parameters to pass to the environment or fun...
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import math def toRad(degree): """convert degrees to radians""" try: d = float(degree) except ValueError: return None else: return d*math.pi/180
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def escape(value, char, escape = "\\"): """ Escapes the provided string value according to the requested target character and escape value. Meaning that all the characters are going to be replaced by the escape plus character sequence. :type value: String :param value: The string that is going ...
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def mock_match(A, B): """ Checked for params on a mocked function is as expected It is necesary as sometimes we get a tuple and at the mock data we have lists. Examples: ``` >>> mock_match("A", "A") True >>> mock_match("A", "B") False >>> mock_match(["A", "B", "C"], ["A", "...
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import io def read_file(file_path): """ Return the content of a file as a string without newlines. :param file_path: The path to the file :type file_path: str :return: File content :rtype: str """ file_string = '' with io.open(file_path, 'r', newline='', encoding='utf8') as file...
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def transpose(m): """transpose(m): transposes a 2D matrix, made of tuples or lists of tuples or lists, keeping their type. >>> transpose([]) Traceback (most recent call last): ... IndexError: list index out of range >>> transpose([[]]) [] >>> transpose([1,2,3]) Traceback (most...
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def is_punct(char): """ Checks if the character is a punctuation Parameters -------------- char: str A single character string to check """ if char == "." or char == "," or char == "!" or char == "?" or char == '\\': return True else: return False
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import random def _determine_value(neighbors, values): """ Returns the value to set an element to based on its neighbors. :param neighbors: The neighbors of the element in question. :param values: The values of the terrain. This is passed in so that a new dictionary doesn't have to be cre...
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def get_full_querystring(request): """ Get the querystring from a request with leading `?` or empty string Parameters ---------- request : django.http.HttpRequest Returns ------- str Querystring with leading `?` if a querystring could be extracted from the request. Oth...
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def get_by_key_chain(mapping, keys): """Get a value from nested mapping by a chain of keys. :param mapping: the mapping from which the value is extracted. :param keys: a sequence of keys used to locate the requested value. :returns: a value resulting from getting a value from the mapping by the...
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def merge_zs_lfcs(reference_df, z_scored_residuals, lfc_df): """Merge z-score and lfc DataFrames Parameters ---------- reference_df: DataFrame Mapping between reference and perturbed conditions z_scored_residuals: DataFrame Melted dataframe with residuals for each condition lfc_...
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def kth_largest_element(nums, left, right, k): """ Find kth largest element in given array (like quick sort) :param nums: given array :type nums: list[int] :param left: left position to begin :type left: int :param right: right position to end :type right: int :param k: kth :typ...
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def _remove_human_readables(token: str) -> str: """Remove human readable characters from a string. Example: "$1,000" -> "1000" :param token: Token to remove human readable characters :return: Token without human readable characters (to cast to numeric type) """ # Translate bad chara...
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def validate_yn(val): """ Input validator function for yes/no prompts. """ _l = val.lower() return _l == 'y' or _l == 'n'
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import calendar def utctotimestamp(dt): """Returns a count of the elapsed seconds between the Unix epoch and the passed-in datetime.datetime object.""" return calendar.timegm(dt.utctimetuple())
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def get_binding(config_dict): """Get the binding for the WeeWX database.""" # Extract our binding from the StdArchive section of the config file. If # it's missing, return None. if 'StdArchive' in config_dict: db_binding_wx = config_dict['StdArchive'].get('data_binding', ...
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def get_train_val_split_from_names(src, val_list): """ Get indices split for train and validation entity names subset src -- list of all entities in dataset val_list -- contains entities that belong to the validation subset """ train_idx = [] val_idx = [] len_ = len(val_list) ...
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from typing import List from typing import Union def perfect_score(student_info: List[List[Union[str, int]]]) -> Union[List[Union[str, int]], str]: """ :param student_info: list of [<student name>, <score>] lists :return: First [<student name>, 100] found OR "No perfect score." """ for elem in stu...
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