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def _diff_text ( left , right , verbose = False ) : """Return the explanation for the diff between text or bytes Unless - - verbose is used this will skip leading and trailing characters which are identical to keep the diff minimal . If the input are bytes they will be safely converted to text ."""
from difflib import ndiff explanation = [ ] if isinstance ( left , py . builtin . bytes ) : left = u ( repr ( left ) [ 1 : - 1 ] ) . replace ( r'\n' , '\n' ) if isinstance ( right , py . builtin . bytes ) : right = u ( repr ( right ) [ 1 : - 1 ] ) . replace ( r'\n' , '\n' ) if not verbose : i = 0 # just...
def _prepare_wsdl_objects ( self ) : """This is the data that will be used to create your shipment . Create the data structure and get it ready for the WSDL request ."""
# Default behavior is to not request transit information self . ReturnTransitAndCommit = False # This is the primary data structure for processShipment requests . self . RequestedShipment = self . client . factory . create ( 'RequestedShipment' ) self . RequestedShipment . ShipTimestamp = datetime . datetime . now ( ) ...
async def get_vm ( self , vm_id ) : """Dummy get _ vm func"""
if vm_id not in self . _vms : raise DummyIaasVmNotFound ( ) return self . _vms [ vm_id ]
def h6_mahe ( simulated_array , observed_array , k = 1 , replace_nan = None , replace_inf = None , remove_neg = False , remove_zero = False ) : """Compute the H6 mean absolute error . . . image : : / pictures / H6 . png . . image : : / pictures / AHE . png * * Range : * * * * Notes : * * Parameters simu...
# Treats data simulated_array , observed_array = treat_values ( simulated_array , observed_array , replace_nan = replace_nan , replace_inf = replace_inf , remove_neg = remove_neg , remove_zero = remove_zero ) top = ( simulated_array / observed_array - 1 ) bot = np . power ( 0.5 * ( 1 + np . power ( simulated_array / ob...
def runQuery ( statDict , query ) : """Filters for the given query ."""
parts = [ x . strip ( ) for x in OPERATOR . split ( query ) ] assert len ( parts ) in ( 1 , 3 ) queryKey = parts [ 0 ] result = { } for key , value in six . iteritems ( statDict ) : if key == queryKey : if len ( parts ) == 3 : op = OPERATORS [ parts [ 1 ] ] try : quer...
def cross_product_compare ( start , candidate1 , candidate2 ) : """Compare two relative changes by their cross - product . This is meant to be a way to determine which vector is more " inside " relative to ` ` start ` ` . . . note : : This is a helper for : func : ` _ simple _ convex _ hull ` . Args : s...
delta1 = candidate1 - start delta2 = candidate2 - start return cross_product ( delta1 , delta2 )
def create ( controller_id , name ) : """Turn class into a kervi controller"""
def _decorator ( cls ) : class _ControllerClass ( cls , Controller ) : def __init__ ( self ) : Controller . __init__ ( self , controller_id , name ) for key in cls . __dict__ . keys ( ) : prop = cls . __dict__ [ key ] if isinstance ( prop , KerviValue ...
def similarity ( self , other ) : """Compare two objects for similarity . @ param self : first object to compare @ param other : second object to compare @ return : L { Similarity } result of comparison"""
sim = self . Similarity ( ) total = 0.0 # Calculate similarity ratio for each attribute cname = self . __class__ . __name__ for aname , weight in self . attributes . items ( ) : attr1 = getattr ( self , aname , None ) attr2 = getattr ( other , aname , None ) self . log ( attr1 , attr2 , '%' , cname = cname ...
def get_varied_cfg_lbls ( cfg_list , default_cfg = None , mainkey = '_cfgname' , checkname = False ) : r"""Args : cfg _ list ( list ) : default _ cfg ( None ) : ( default = None ) checkname ( bool ) : if True removes names if they are all the same . Returns : list : cfglbl _ list CommandLine : python ...
import utool as ut try : cfgname_list = [ cfg [ mainkey ] for cfg in cfg_list ] except KeyError : cfgname_list = [ '' ] * len ( cfg_list ) varied_cfg_list = partition_varied_cfg_list ( cfg_list , default_cfg ) [ 1 ] if checkname and ut . allsame ( cfgname_list ) : cfgname_list = [ None ] * len ( cfgname_lis...
def _parseSpecType ( self , classString ) : """This class attempts to parse the spectral type . It should probably use more advanced matching use regex"""
try : classString = str ( classString ) except UnicodeEncodeError : # This is for the benefit of 1RXS1609 which currently has the spectral type K7 \ pm 1V # TODO add unicode support and handling for this case / ammend the target return False # some initial cases if classString == '' or classString == 'nan' : ...
def process_data ( self , file_info ) : """expects FileInfo"""
if self . _has_reached_stop_limit ( ) : self . log . info ( "Remaining bytes in quota (%d) has reached minimum to request stop (%d)" , self . _quota . remaining , self . _stop_on_remaining ) self . fire ( events . TransmissionQuotaReached ( ) ) elif not self . _fits_in_quota ( file_info ) : self . log . deb...
def vector_drive ( self , vx , vy , vw , tm_diff ) : """Call this from your : func : ` PhysicsEngine . update _ sim ` function . Will update the robot ' s position on the simulation field . This moves the robot using a velocity vector relative to the robot instead of by speed / rotation speed . : param vx :...
# if the robot is disabled , don ' t do anything if not self . robot_enabled : return angle = vw * tm_diff vx = vx * tm_diff vy = vy * tm_diff x = vx * math . sin ( angle ) + vy * math . cos ( angle ) y = vx * math . cos ( angle ) + vy * math . sin ( angle ) self . distance_drive ( x , y , angle )
def _search_mapred_emu ( self , index , query ) : """Emulates a search request via MapReduce . Used in the case where the transport supports MapReduce but has no native search capability ."""
phases = [ ] if not self . phaseless_mapred ( ) : phases . append ( { 'language' : 'erlang' , 'module' : 'riak_kv_mapreduce' , 'function' : 'reduce_identity' , 'keep' : True } ) mr_result = self . mapred ( { 'module' : 'riak_search' , 'function' : 'mapred_search' , 'arg' : [ index , query ] } , phases ) result = { ...
def makedirs ( name , mode = 0o777 , exist_ok = False ) : """cheapo replacement for py3 makedirs with support for exist _ ok"""
if os . path . exists ( name ) : if not exist_ok : raise FileExistsError ( "File exists: " + name ) else : os . makedirs ( name , mode )
def resolve_multiple_existing_paths ( paths ) : """: param paths : A list of paths to items that need to be resolved : type paths : list : returns : A dictionary mapping a specified path to either its resolved object or Nones , if the object could not be resolved : rtype : dict For each input given in pat...
done_objects = { } # Return value to_resolve_in_batch_paths = [ ] # Paths to resolve to_resolve_in_batch_inputs = [ ] # Project , folderpath , and entity name for path in paths : project , folderpath , entity_name = resolve_path ( path , expected = 'entity' ) try : must_resolve , project , folderpath , ...
def layout_spring ( self , num_dims = 2 , spring_constant = None , iterations = 50 , initial_temp = 0.1 , initial_layout = None ) : '''Position vertices using the Fruchterman - Reingold ( spring ) algorithm . num _ dims : int ( default = 2) Number of dimensions to embed vertices in . spring _ constant : float...
if initial_layout is None : X = np . random . random ( ( self . num_vertices ( ) , num_dims ) ) else : X = np . array ( initial_layout , dtype = float , copy = True ) assert X . shape == ( self . num_vertices ( ) , num_dims ) if spring_constant is None : # default to sqrt ( area _ of _ viewport / num _ vert...
def send_rpc_message ( self , method , request ) : '''Sends a Hadoop RPC request to the NameNode . The IpcConnectionContextProto , RpcPayloadHeaderProto and HadoopRpcRequestProto should already be serialized in the right way ( delimited or not ) before they are passed in this method . The Hadoop RPC protoco...
log . debug ( "############## SENDING ##############" ) # 0 . RpcRequestHeaderProto rpc_request_header = self . create_rpc_request_header ( ) # 1 . RequestHeaderProto request_header = self . create_request_header ( method ) # 2 . Param param = request . SerializeToString ( ) if log . getEffectiveLevel ( ) == logging . ...
def serialize ( obj ) : """JSON serializer for objects not serializable by default json code"""
if isinstance ( obj , datetime . datetime ) : serial = obj . isoformat ( sep = 'T' ) return serial if isinstance ( obj , uuid . UUID ) : serial = str ( obj ) return serial try : return obj . __dict__ except AttributeError : return str ( obj ) except Exception as e : strval = 'unknown obj' ...
def update_pypsa_storage ( pypsa , storages , storages_lines ) : """Adds storages and their lines to pypsa representation of the edisgo graph . This function effects the following attributes of the pypsa network : components ( ' StorageUnit ' ) , storage _ units , storage _ units _ t ( p _ set , q _ set ) , b...
bus = { 'name' : [ ] , 'v_nom' : [ ] , 'x' : [ ] , 'y' : [ ] } line = { 'name' : [ ] , 'bus0' : [ ] , 'bus1' : [ ] , 'type' : [ ] , 'x' : [ ] , 'r' : [ ] , 's_nom' : [ ] , 'length' : [ ] } storage = { 'name' : [ ] , 'bus' : [ ] , 'p_nom' : [ ] , 'state_of_charge_initial' : [ ] , 'efficiency_store' : [ ] , 'efficiency_d...
def check_status ( status ) : """Check the status of a mkl functions and raise a python exeption if there is an error ."""
if status : msg = lib . DftiErrorMessage ( status ) msg = ctypes . c_char_p ( msg ) . value raise RuntimeError ( msg )
def get_screen_size ( self , screen_no ) : """Returns the size of the given screen number"""
return GetScreenSize ( display = self . display , opcode = self . display . get_extension_major ( extname ) , window = self . id , screen = screen_no , )
def pspawn_wrapper ( self , sh , escape , cmd , args , env ) : """Wrapper function for handling piped spawns . This looks to the calling interface ( in Action . py ) like a " normal " spawn , but associates the call with the PSPAWN variable from the construction environment and with the streams to which we ...
return self . pspawn ( sh , escape , cmd , args , env , self . logstream , self . logstream )
def get_mean_and_stddevs ( self , sites , rup , dists , imt , stddev_types ) : """See : meth : ` superclass method < . base . GroundShakingIntensityModel . get _ mean _ and _ stddevs > ` for spec of input and result values ."""
sites . vs30 = 700 * np . ones ( len ( sites . vs30 ) ) mean , stddevs = super ( ) . get_mean_and_stddevs ( sites , rup , dists , imt , stddev_types ) C = CauzziFaccioli2008SWISS01 . COEFFS tau_ss = 'tau' log_phi_ss = np . log ( 10 ) mean , stddevs = _apply_adjustments ( C , self . COEFFS_FS_ROCK [ imt ] , tau_ss , mea...
def temp_unit ( self ) : """Get unit of temp ."""
if CONST . UNIT_FAHRENHEIT in self . _get_status ( CONST . TEMP_STATUS_KEY ) : return CONST . UNIT_FAHRENHEIT elif CONST . UNIT_CELSIUS in self . _get_status ( CONST . TEMP_STATUS_KEY ) : return CONST . UNIT_CELSIUS return None
def create_action ( self ) : """Create actions associated with Annotations ."""
actions = { } act = QAction ( 'New Annotations' , self ) act . triggered . connect ( self . new_annot ) actions [ 'new_annot' ] = act act = QAction ( 'Load Annotations' , self ) act . triggered . connect ( self . load_annot ) actions [ 'load_annot' ] = act act = QAction ( 'Clear Annotations...' , self ) act . triggered...
def pairwise ( iterable ) : """From itertools cookbook . [ a , b , c , . . . ] - > ( a , b ) , ( b , c ) , . . ."""
first , second = tee ( iterable ) next ( second , None ) return zip ( first , second )
def register ( self , schema ) : """Register input schema class . When registering a schema , all inner schemas are registered as well . : param Schema schema : schema to register . : return : old registered schema . : rtype : type"""
result = None uuid = schema . uuid if uuid in self . _schbyuuid : result = self . _schbyuuid [ uuid ] if result != schema : self . _schbyuuid [ uuid ] = schema name = schema . name schemas = self . _schbyname . setdefault ( name , set ( ) ) schemas . add ( schema ) for innername , innerschema in...
def get_checksum ( file ) : """Get SHA256 hash from the contents of a given file"""
with open ( file , 'rb' ) as FH : contents = FH . read ( ) return hashlib . sha256 ( contents ) . hexdigest ( )
def fetch ( self ) : """Fetch & return a new ` Tag ` object representing the tag ' s current state : rtype : Tag : raises DOAPIError : if the API endpoint replies with an error ( e . g . , if the tag no longer exists )"""
api = self . doapi_manager return api . _tag ( api . request ( self . url ) [ "tag" ] )
async def _async_get_data ( self , resource , id = None ) : """Get the data from the resource ."""
if id : url = urljoin ( self . _api_url , "spc/{}/{}" . format ( resource , id ) ) else : url = urljoin ( self . _api_url , "spc/{}" . format ( resource ) ) data = await async_request ( self . _session . get , url ) if not data : return False if id and isinstance ( data [ 'data' ] [ resource ] , list ) : # ...
def remove ( self , observableElement ) : """remove an obsrvable element : param str observableElement : the name of the observable element"""
if observableElement in self . _observables : self . _observables . remove ( observableElement )
def set_accuracy ( self , acc ) : """Sets the accuracy order of the finite difference scheme . If the FinDiff object is not a raw partial derivative but a composition of derivatives the accuracy order will be propagated to the child operators ."""
self . acc = acc if self . child : self . child . set_accuracy ( acc )
def type ( self ) : """Returns the shape of the data array associated with this file ."""
hdu = self . open ( ) _type = hdu . data . dtype . name if not self . inmemory : self . close ( ) del hdu return _type
def delete_port_binding ( self , port , host ) : """Enqueue port binding delete"""
if not self . get_instance_type ( port ) : return for pb_key in self . _get_binding_keys ( port , host ) : pb_res = MechResource ( pb_key , a_const . PORT_BINDING_RESOURCE , a_const . DELETE ) self . provision_queue . put ( pb_res )
def make_bag ( bag_dir , bag_info = None , processes = 1 , checksum = None ) : """Convert a given directory into a bag . You can pass in arbitrary key / value pairs to put into the bag - info . txt metadata file as the bag _ info dictionary ."""
bag_dir = os . path . abspath ( bag_dir ) logger . info ( "creating bag for directory %s" , bag_dir ) # assume md5 checksum if not specified if not checksum : checksum = [ 'md5' ] if not os . path . isdir ( bag_dir ) : logger . error ( "no such bag directory %s" , bag_dir ) raise RuntimeError ( "no such bag...
def discard ( self , item ) : '''Remove * item * .'''
index = self . _index ( item ) if index >= 0 : del self . _members [ index ]
def ckan_extension_template ( name , target ) : """Create ckanext - ( name ) in target directory ."""
setupdir = '{0}/ckanext-{1}theme' . format ( target , name ) extdir = setupdir + '/ckanext/{0}theme' . format ( name ) templatedir = extdir + '/templates/' staticdir = extdir + '/static/datacats' makedirs ( templatedir + '/home/snippets' ) makedirs ( staticdir ) here = dirname ( __file__ ) copyfile ( here + '/images/ch...
def AgregarCTG ( self , nro_ctg = None , nro_carta_porte = None , porcentaje_secado_humedad = None , importe_secado = None , peso_neto_merma_secado = None , tarifa_secado = None , importe_zarandeo = None , peso_neto_merma_zarandeo = None , tarifa_zarandeo = None , peso_neto_confirmado_definitivo = None , ** kwargs ) : ...
ctg = dict ( nroCTG = nro_ctg , nroCartaDePorte = nro_carta_porte , pesoNetoConfirmadoDefinitivo = peso_neto_confirmado_definitivo , porcentajeSecadoHumedad = porcentaje_secado_humedad , importeSecado = importe_secado , pesoNetoMermaSecado = peso_neto_merma_secado , tarifaSecado = tarifa_secado , importeZarandeo = impo...
def eth_getLogs ( self , from_block = BLOCK_TAG_LATEST , to_block = BLOCK_TAG_LATEST , address = None , topics = None ) : """https : / / github . com / ethereum / wiki / wiki / JSON - RPC # eth _ getlogs : param from _ block : Block tag or number ( optional ) : type from _ block : int or BLOCK _ TAGS : param ...
obj = { 'fromBlock' : validate_block ( from_block ) , 'toBlock' : validate_block ( to_block ) , 'address' : address , 'topics' : topics } result = yield from self . rpc_call ( 'eth_getLogs' , [ obj ] ) return result
def gen_code_api ( self ) : """TODO : Docstring for gen _ code _ api ."""
# edit config file conf_editor = Editor ( self . conf_fpath ) # insert code path for searching conf_editor . editline_with_regex ( r'^# import os' , 'import os' ) conf_editor . editline_with_regex ( r'^# import sys' , 'import sys' ) conf_editor . editline_with_regex ( r'^# sys\.path\.insert' , 'sys.path.insert(0, "{}")...
def run_bafRegress ( filenames , out_prefix , extract_filename , freq_filename , options ) : """Runs the bafRegress function . : param filenames : the set of all sample files . : param out _ prefix : the output prefix . : param extract _ filename : the name of the markers to extract . : param freq _ filenam...
# The command command = [ "bafRegress.py" , "estimate" , "--freqfile" , freq_filename , "--freqcol" , "2,5" , "--extract" , extract_filename , "--colsample" , options . colsample , "--colmarker" , options . colmarker , "--colbaf" , options . colbaf , "--colab1" , options . colab1 , "--colab2" , options . colab2 , ] com...
def check_error_code ( self ) : """For CredSSP version of 3 or newer , the server can response with an NtStatus error code with details of what error occurred . This method will check if the error code exists and throws an NTStatusException if it is no STATUS _ SUCCESS ."""
# start off with STATUS _ SUCCESS as a baseline status = NtStatusCodes . STATUS_SUCCESS error_code = self [ 'errorCode' ] if error_code . isValue : # ASN . 1 Integer is stored as an signed integer , we need to # convert it to a unsigned integer status = ctypes . c_uint32 ( error_code ) . value if status != NtStatus...
def get_sigma ( database_file_name = '' , e_min = np . NaN , e_max = np . NaN , e_step = np . NaN , t_kelvin = None ) : """retrieve the Energy and sigma axis for the given isotope : param database _ file _ name : path / to / file with extension : type database _ file _ name : string : param e _ min : left ene...
file_extension = os . path . splitext ( database_file_name ) [ 1 ] if t_kelvin is None : # ' . csv ' files if file_extension != '.csv' : raise IOError ( "Cross-section File type must be '.csv'" ) else : _df = get_database_data ( file_name = database_file_name ) _dict = get_interpolated_d...
def del_all_host_comments ( self , host ) : """Delete all host comments Format of the line that triggers function call : : DEL _ ALL _ HOST _ COMMENTS ; < host _ name > : param host : host to edit : type host : alignak . objects . host . Host : return : None"""
comments = list ( host . comments . keys ( ) ) for uuid in comments : host . del_comment ( uuid ) self . send_an_element ( host . get_update_status_brok ( ) )
def mark_flags_as_required ( flag_names , flag_values = _flagvalues . FLAGS ) : """Ensures that flags are not None during program execution . Recommended usage : if _ _ name _ _ = = ' _ _ main _ _ ' : flags . mark _ flags _ as _ required ( [ ' flag1 ' , ' flag2 ' , ' flag3 ' ] ) app . run ( ) Args : fla...
for flag_name in flag_names : mark_flag_as_required ( flag_name , flag_values )
def get_vnetwork_dvs_output_vnetwork_dvs_interface_type ( self , ** kwargs ) : """Auto Generated Code"""
config = ET . Element ( "config" ) get_vnetwork_dvs = ET . Element ( "get_vnetwork_dvs" ) config = get_vnetwork_dvs output = ET . SubElement ( get_vnetwork_dvs , "output" ) vnetwork_dvs = ET . SubElement ( output , "vnetwork-dvs" ) interface_type = ET . SubElement ( vnetwork_dvs , "interface-type" ) interface_type . te...
def create_instances_from_matrices ( x , y = None , name = "data" ) : """Allows the generation of an Instances object from a 2 - dimensional matrix for X and a 1 - dimensional matrix for Y ( optional ) . All data must be numerical . Attributes can be converted to nominal with the weka . filters . unsupervised...
if y is not None : if len ( x ) != len ( y ) : raise Exception ( "Dimensions of x and y differ: " + str ( len ( x ) ) + " != " + str ( len ( y ) ) ) # create header atts = [ ] for i in range ( len ( x [ 0 ] ) ) : atts . append ( Attribute . create_numeric ( "x" + str ( i + 1 ) ) ) if y is not None : ...
def confirm_login_allowed ( self , user ) : """Controls whether the given User may log in . This is a policy setting , independent of end - user authentication . This default behavior is to allow login by active users , and reject login by inactive users . If the given user cannot log in , this method should ...
if not user . is_active : raise forms . ValidationError ( self . error_messages [ 'inactive' ] , code = 'inactive' , )
def waypoint_request_list_send ( self ) : '''wrapper for waypoint _ request _ list _ send'''
if self . mavlink10 ( ) : self . mav . mission_request_list_send ( self . target_system , self . target_component ) else : self . mav . waypoint_request_list_send ( self . target_system , self . target_component )
def multi_h1 ( cls , a_dict : Dict [ str , Any ] , bins = None , ** kwargs ) -> "HistogramCollection" : """Create a collection from multiple datasets ."""
from physt . binnings import calculate_bins mega_values = np . concatenate ( list ( a_dict . values ( ) ) ) binning = calculate_bins ( mega_values , bins , ** kwargs ) title = kwargs . pop ( "title" , None ) name = kwargs . pop ( "name" , None ) collection = HistogramCollection ( binning = binning , title = title , nam...
def get_next_first ( intersection , intersections , to_end = True ) : """Gets the next node along the current ( first ) edge . . . note : : This is a helper used only by : func : ` get _ next ` , which in turn is only used by : func : ` basic _ interior _ combine ` , which itself is only used by : func : ` ...
along_edge = None index_first = intersection . index_first s = intersection . s for other_int in intersections : other_s = other_int . s if other_int . index_first == index_first and other_s > s : if along_edge is None or other_s < along_edge . s : along_edge = other_int if along_edge is Non...
def _TerminateProcess ( self , process ) : """Terminate a process . Args : process ( MultiProcessBaseProcess ) : process to terminate ."""
pid = process . pid logger . warning ( 'Terminating process: (PID: {0:d}).' . format ( pid ) ) process . terminate ( ) # Wait for the process to exit . process . join ( timeout = self . _PROCESS_JOIN_TIMEOUT ) if process . is_alive ( ) : logger . warning ( 'Killing process: (PID: {0:d}).' . format ( pid ) ) sel...
def plot_diagram ( ax , x , y , label = "S" , title = "syntenic" , gradient = True ) : """Part of the diagrams that are re - used . ( x , y ) marks the center of the diagram . Label determines the modification to the " S " graph ."""
trackgap = .06 tracklen = .12 xa , xb = x - tracklen , x + tracklen ya , yb = y + trackgap , y - trackgap hsps = ( ( ( 60 , 150 ) , ( 50 , 130 ) ) , ( ( 190 , 225 ) , ( 200 , 240 ) ) , ( ( 330 , 280 ) , ( 360 , 310 ) ) ) for yy in ( ya , yb ) : ax . plot ( ( xa , xb ) , ( yy , yy ) , "-" , color = "gray" , lw = 2 ,...
def app ( self ) : """Internal method that will supply the app to use internally . Returns : flask . Flask : The app to use within the component . Raises : RuntimeError : This is raised if no app was provided to the component and the method is being called outside of an application context ."""
app = self . _app or current_app if not in_app_context ( app ) : raise RuntimeError ( "This component hasn't been initialized yet " "and an app context doesn't exist." ) # If current _ app is the app , this must be used in order for their IDs # to be the same , as current _ app will wrap the app in a proxy . if has...
def _proxy ( self ) : """Generate an instance context for the instance , the context is capable of performing various actions . All instance actions are proxied to the context : returns : FaxMediaContext for this FaxMediaInstance : rtype : twilio . rest . fax . v1 . fax . fax _ media . FaxMediaContext"""
if self . _context is None : self . _context = FaxMediaContext ( self . _version , fax_sid = self . _solution [ 'fax_sid' ] , sid = self . _solution [ 'sid' ] , ) return self . _context
def delete ( self , key , sort_key ) : primary_key = key key = self . prefixed ( '{}:{}' . format ( key , sort_key ) ) """Delete an element in dictionary"""
self . logger . debug ( 'Storage - delete {}' . format ( key ) ) if sort_key is not None : self . cache [ self . prefixed ( primary_key ) ] . remove ( sort_key ) for index in self . _secondary_indexes : obj = json . loads ( self . cache [ key ] ) if index in obj . keys ( ) : self . cache [ 'secondar...
def _parse_create_args ( client , args ) : """Converts CLI arguments to args for VSManager . create _ instance . : param dict args : CLI arguments"""
data = { "hourly" : args . get ( 'billing' , 'hourly' ) == 'hourly' , "cpus" : args . get ( 'cpu' , None ) , "ipv6" : args . get ( 'ipv6' , None ) , "disks" : args . get ( 'disk' , None ) , "os_code" : args . get ( 'os' , None ) , "memory" : args . get ( 'memory' , None ) , "flavor" : args . get ( 'flavor' , None ) , "...
def render ( self , context , instance , placeholder ) : '''Allows this plugin to use templates designed for a list of locations .'''
context = super ( LocationPlugin , self ) . render ( context , instance , placeholder ) context [ 'location_list' ] = [ instance . location , ] return context
def to_index ( self , index_type , index_name , includes = None ) : """Create an index field from this field"""
return IndexField ( self . name , self . data_type , index_type , index_name , includes )
def _initialize ( self , funs_to_tally , length ) : """Create a group named ` ` chain # ` ` to store all data for this chain ."""
chain = self . nchains self . _chains [ chain ] = self . _h5file . create_group ( '/' , 'chain%d' % chain , 'chain #%d' % chain ) for name , fun in six . iteritems ( funs_to_tally ) : arr = np . asarray ( fun ( ) ) assert arr . dtype != np . dtype ( 'object' ) array = self . _h5file . createEArray ( self . ...
def process_parsed_coords ( coords ) : """Takes a set of parsed coordinates , which come as an array of strings , and returns a numpy array of floats ."""
geometry = np . zeros ( shape = ( len ( coords ) , 3 ) , dtype = float ) for ii , entry in enumerate ( coords ) : for jj in range ( 3 ) : geometry [ ii , jj ] = float ( entry [ jj ] ) return geometry
def __fillablebox ( msg , title = "" , default = "" , mask = None , image = None , root = None ) : """Show a box in which a user can enter some text . You may optionally specify some default text , which will appear in the enterbox when it is displayed . Returns the text that the user entered , or None if he ...
if sys . platform == 'darwin' : _bring_to_front ( ) global boxRoot , __enterboxText , __enterboxDefaultText global cancelButton , entryWidget , okButton if title is None : title = "" if default is None : default = "" __enterboxDefaultText = default __enterboxText = __enterboxDefaultText if root : root ....
def generate ( env ) : """Add Builders and construction variables for cyglink to an Environment ."""
gnulink . generate ( env ) env [ 'LINKFLAGS' ] = SCons . Util . CLVar ( '-Wl,-no-undefined' ) env [ 'SHLINKCOM' ] = shlib_action env [ 'LDMODULECOM' ] = ldmod_action env . Append ( SHLIBEMITTER = [ shlib_emitter ] ) env . Append ( LDMODULEEMITTER = [ ldmod_emitter ] ) env [ 'SHLIBPREFIX' ] = 'cyg' env [ 'SHLIBSUFFIX' ]...
def folderitem ( self , obj , item , index ) : """Service triggered each time an item is iterated in folderitems . The use of this service prevents the extra - loops in child objects . : obj : the instance of the class to be foldered : item : dict containing the properties of the object to be used by the te...
title = obj . Title ( ) description = obj . Description ( ) url = obj . absolute_url ( ) item [ "replace" ] [ "Title" ] = get_link ( url , value = title ) item [ "Description" ] = description sample_types = obj . getSampleTypes ( ) if sample_types : links = map ( lambda st : get_link ( st . absolute_url ( ) , value...
def add_subplot ( self , x , y , n , margin = 0.05 ) : """Creates a div child subplot in a matplotlib . figure . add _ subplot style . Parameters x : int The number of rows in the grid . y : int The number of columns in the grid . n : int The cell number in the grid , counted from 1 to x * y . Examp...
width = 1. / y height = 1. / x left = ( ( n - 1 ) % y ) * width top = ( ( n - 1 ) // y ) * height left = left + width * margin top = top + height * margin width = width * ( 1 - 2. * margin ) height = height * ( 1 - 2. * margin ) div = Div ( position = 'absolute' , width = '{}%' . format ( 100. * width ) , height = '{}%...
def from_api_repr ( cls , resource , zone ) : """Factory : construct a change set given its API representation : type resource : dict : param resource : change set representation returned from the API . : type zone : : class : ` google . cloud . dns . zone . ManagedZone ` : param zone : A zone which holds z...
changes = cls ( zone = zone ) changes . _set_properties ( resource ) return changes
def get_ssl_context ( private_key , certificate ) : """Get ssl context from private key and certificate paths . The return value is used when calling Flask . i . e . app . run ( ssl _ context = get _ ssl _ context ( , , , ) )"""
if ( certificate and os . path . isfile ( certificate ) and private_key and os . path . isfile ( private_key ) ) : context = ssl . SSLContext ( ssl . PROTOCOL_TLSv1_2 ) context . load_cert_chain ( certificate , private_key ) return context return None
def all_build_jobs ( self ) : """Similar to build _ jobs , but uses the default manager to return archived experiments as well ."""
from db . models . build_jobs import BuildJob return BuildJob . all . filter ( project = self )
def wrap_handler ( cls , handler , protocol , ** kwargs ) : '''Wrap a request handler with the matching protocol handler'''
def _wrapper ( request , * args , ** kwargs ) : instance = cls ( request = request , ** kwargs ) if protocol == Resource . Protocol . http : return instance . _wrap_http ( handler , request = request , ** kwargs ) elif protocol == Resource . Protocol . websocket : return instance . _wrap_ws ...
def pf_post_lopf ( network , args , extra_functionality , add_foreign_lopf ) : """Function that prepares and runs non - linar load flow using PyPSA pf . If network has been extendable , a second lopf with reactances adapted to new s _ nom is needed . If crossborder lines are DC - links , pf is only applied on...
network_pf = network # Update x of extended lines and transformers if network_pf . lines . s_nom_extendable . any ( ) or network_pf . transformers . s_nom_extendable . any ( ) : storages_extendable = network_pf . storage_units . p_nom_extendable . copy ( ) lines_extendable = network_pf . lines . s_nom_extendabl...
def load ( filename ) : """Load a CameraIntrinsics object from a file . Parameters filename : : obj : ` str ` The . intr file to load the object from . Returns : obj : ` CameraIntrinsics ` The CameraIntrinsics object loaded from the file . Raises ValueError If filename does not have the . intr ext...
file_root , file_ext = os . path . splitext ( filename ) if file_ext . lower ( ) != INTR_EXTENSION : raise ValueError ( 'Extension %s not supported for CameraIntrinsics. Must be stored with extension %s' % ( file_ext , INTR_EXTENSION ) ) f = open ( filename , 'r' ) ci = json . load ( f ) f . close ( ) return Orthog...
def _do_else ( self , rule , p_selectors , p_parents , p_children , scope , media , c_lineno , c_property , c_codestr , code , name ) : """Implements @ else"""
if '@if' not in rule [ OPTIONS ] : log . error ( "@else with no @if (%s" , rule [ INDEX ] [ rule [ LINENO ] ] ) val = rule [ OPTIONS ] . pop ( '@if' , True ) if not val : rule [ CODESTR ] = c_codestr self . manage_children ( rule , p_selectors , p_parents , p_children , scope , media )
def _ensure_values ( data : Mapping [ str , Any ] ) -> Tuple [ Dict [ str , Any ] , bool ] : """Make sure we have appropriate keys and say if we should write"""
to_return = { } should_write = False for keyname , typekind , default in REQUIRED_DATA : if keyname not in data : LOG . debug ( f"Defaulted config value {keyname} to {default}" ) to_return [ keyname ] = default should_write = True elif not isinstance ( data [ keyname ] , typekind ) : ...
def load_wc ( cls , stream ) : """Return a ` Wilson ` instance initialized by a WCxf file - like object"""
wc = wcxf . WC . load ( stream ) return cls . from_wc ( wc )
def plot ( self , wavelengths = None , ** kwargs ) : # pragma : no cover """Plot the spectrum . . . note : : Uses ` ` matplotlib ` ` . Parameters wavelengths : array - like , ` ~ astropy . units . quantity . Quantity ` , or ` None ` Wavelength values for sampling . If not a Quantity , assumed to be in Ang...
w , y = self . _get_arrays ( wavelengths ) self . _do_plot ( w , y , ** kwargs )
def set_dwelling_current ( self , settings ) : '''Sets the amperage of each motor for when it is dwelling . Values are initialized from the ` robot _ config . log _ current ` values , and can then be changed through this method by other parts of the API . For example , ` Pipette ` setting the dwelling - curre...
self . _dwelling_current_settings [ 'now' ] . update ( settings ) # if an axis specified in the ` settings ` is currently dwelling , # reset it ' s current to the new dwelling - current value dwelling_axes_to_update = { axis : amps for axis , amps in self . _dwelling_current_settings [ 'now' ] . items ( ) if self . _ac...
def _parse_supl ( content ) : """Parse supplemental measurements data . Parameters content : str Data to parse Returns : class : ` pandas . DataFrame ` containing the data"""
col_names = [ 'year' , 'month' , 'day' , 'hour' , 'minute' , 'hourly_low_pressure' , 'hourly_low_pressure_time' , 'hourly_high_wind' , 'hourly_high_wind_direction' , 'hourly_high_wind_time' ] col_units = { 'hourly_low_pressure' : 'hPa' , 'hourly_low_pressure_time' : None , 'hourly_high_wind' : 'meters/second' , 'hourly...
def read ( self , n ) : """Read * n * bytes from the subprocess ' output channel . Args : n ( int ) : The number of bytes to read . Returns : bytes : * n * bytes of output . Raises : EOFError : If the process exited ."""
d = b'' while n : try : block = self . _process . stdout . read ( n ) except ValueError : block = None if not block : self . _process . poll ( ) raise EOFError ( 'Process ended' ) d += block n -= len ( block ) return d
def dewpoint_rh ( temperature , rh ) : r"""Calculate the ambient dewpoint given air temperature and relative humidity . Parameters temperature : ` pint . Quantity ` Air temperature rh : ` pint . Quantity ` Relative humidity expressed as a ratio in the range 0 < rh < = 1 Returns ` pint . Quantity ` T...
if np . any ( rh > 1.2 ) : warnings . warn ( 'Relative humidity >120%, ensure proper units.' ) return dewpoint ( rh * saturation_vapor_pressure ( temperature ) )
def describe_tile ( self , index ) : """Get the registration information for the tile at the given index ."""
if index >= len ( self . tile_manager . registered_tiles ) : tile = TileInfo . CreateInvalid ( ) else : tile = self . tile_manager . registered_tiles [ index ] return tile . registration_packet ( )
def unicast ( self , socket_id , event , data ) : """Sends an event to a single socket . Returns ` True ` if that worked or ` False ` if not ."""
payload = self . _server . serialize_event ( event , data ) rv = self . _server . sockets . get ( socket_id ) if rv is not None : rv . socket . send ( payload ) return True return False
def _to_datalibrary_safe ( fname , gi , folder_name , sample_info , config ) : """Upload with retries for intermittent JSON failures ."""
num_tries = 0 max_tries = 5 while 1 : try : _to_datalibrary ( fname , gi , folder_name , sample_info , config ) break except ( simplejson . scanner . JSONDecodeError , bioblend . galaxy . client . ConnectionError ) as e : num_tries += 1 if num_tries > max_tries : rais...
def _put_subject ( self , subject_id , body ) : """Update a subject for the given subject id . The body is not a list but a dictionary of a single resource ."""
assert isinstance ( body , ( dict ) ) , "PUT requires body to be dict." # subject _ id could be a path such as ' / asset / 123 ' so quote uri = self . _get_subject_uri ( guid = subject_id ) return self . service . _put ( uri , body )
def complete ( self , msg ) : """Called to complete a transaction , usually when ProcessIO has shipped the IOCB off to some other thread or function ."""
if _debug : IOCB . _debug ( "complete(%d) %r" , self . ioID , msg ) if self . ioController : # pass to controller self . ioController . complete_io ( self , msg ) else : # just fill in the data self . ioState = COMPLETED self . ioResponse = msg self . trigger ( )
def restore ( self ) : """Restore the saved value for the attribute of the object ."""
if self . proxy_object is None : if self . getter : setattr ( self . getter_class , self . attr_name , self . getter ) elif self . is_local : setattr ( self . orig_object , self . attr_name , self . orig_value ) else : # Was not a local , safe to delete : delattr ( self . orig_object...
def copy ( self , existing_inputs ) : """Creates a copy of self using existing input placeholders ."""
return PPOPolicyGraph ( self . observation_space , self . action_space , self . config , existing_inputs = existing_inputs )
def add_members ( current ) : """Subscribe member ( s ) to a channel . . code - block : : python # request : ' view ' : ' _ zops _ add _ members ' , ' channel _ key ' : key , ' read _ only ' : boolean , # true if this is a Broadcast channel , # false if it ' s a normal chat room ' members ' : [ key , ...
newly_added , existing = [ ] , [ ] read_only = current . input [ 'read_only' ] for member_key in current . input [ 'members' ] : sb , new = Subscriber ( current ) . objects . get_or_create ( user_id = member_key , read_only = read_only , channel_id = current . input [ 'channel_key' ] ) if new : newly_ad...
def _print_fields ( self , fields ) : """Print the fields , padding the names as necessary to align them ."""
# Prepare a formatting string that aligns the names and types based on the longest ones longest_name = max ( fields , key = lambda f : len ( f [ 1 ] ) ) [ 1 ] longest_type = max ( fields , key = lambda f : len ( f [ 2 ] ) ) [ 2 ] field_format = '%s%-{}s %-{}s %s' . format ( len ( longest_name ) + self . _padding_after_...
def minify ( compiled ) : """Perform basic minifications . Fails on non - tabideal indentation or a string with a # ."""
compiled = compiled . strip ( ) if compiled : out = [ ] for line in compiled . splitlines ( ) : line = line . split ( "#" , 1 ) [ 0 ] . rstrip ( ) if line : ind = 0 while line . startswith ( " " ) : line = line [ 1 : ] ind += 1 ...
def Run ( self ) : "Execute the action"
inputs = self . GetInput ( ) return SendInput ( len ( inputs ) , ctypes . byref ( inputs ) , ctypes . sizeof ( INPUT ) )
def RepositoryName ( self ) : """FullName after removing the local path to the repository . If we have a real absolute path name here we can try to do something smart : detecting the root of the checkout and truncating / path / to / checkout from the name so that we get header guards that don ' t include thin...
fullname = self . FullName ( ) if os . path . exists ( fullname ) : project_dir = os . path . dirname ( fullname ) if os . path . exists ( os . path . join ( project_dir , ".svn" ) ) : # If there ' s a . svn file in the current directory , we recursively look # up the directory tree for the top of the SVN c...
def integerize ( self ) : """Convert co - ordinate values to integers ."""
self . x = int ( round ( self . x ) ) self . y = int ( round ( self . y ) )
def __get_gaas_hmac_headers ( self , method , url , date = None , body = None , secret = None , userId = None ) : """Note : this documentation was copied for the Java client for GP . Generate GaaS HMAC credentials used for HTTP Authorization header . GaaS HMAC uses HMAC SHA1 algorithm signing a message composed...
if not date : date = self . __get_RFC1123_date ( ) message = str ( method ) + '\n' + str ( url ) + '\n' + str ( date ) + '\n' if body : message += str ( body ) if not secret : secret = self . __serviceAccount . get_password ( ) secret = bytes ( secret . encode ( self . __ENCODINGFORMAT ) ) message = bytes (...
def crop ( stream , x , y , width , height , ** kwargs ) : """Crop the input video . Args : x : The horizontal position , in the input video , of the left edge of the output video . y : The vertical position , in the input video , of the top edge of the output video . width : The width of the output vid...
return FilterNode ( stream , crop . __name__ , args = [ width , height , x , y ] , kwargs = kwargs ) . stream ( )
def get_prep_value ( self , value ) : """Return the integer value to be stored from the hex string"""
if value is None or value == "" : return None if isinstance ( value , six . string_types ) : value = _hex_string_to_unsigned_integer ( value ) if _using_signed_storage ( ) : value = _unsigned_to_signed_integer ( value ) return value
def distance_similarity ( a , b , p , T = CLOSE_DISTANCE_THRESHOLD ) : """Computes the distance similarity between a line segment and a point Args : a ( [ float , float ] ) : x and y coordinates . Line start b ( [ float , float ] ) : x and y coordinates . Line end p ( [ float , float ] ) : x and y coordin...
d = distance_to_line ( a , b , p ) r = ( - 1 / float ( T ) ) * abs ( d ) + 1 return r if r > 0 else 0
def query_all ( ) : '''查询大类记录'''
recs = TabTag . select ( ) . where ( TabTag . uid . endswith ( '00' ) ) . order_by ( TabTag . uid ) return recs
def message ( subject , message , access_token , all_members = False , project_member_ids = None , base_url = OH_BASE_URL ) : """Send an email to individual users or in bulk . To learn more about Open Humans OAuth2 projects , go to : https : / / www . openhumans . org / direct - sharing / oauth2 - features / ...
url = urlparse . urljoin ( base_url , '/api/direct-sharing/project/message/?{}' . format ( urlparse . urlencode ( { 'access_token' : access_token } ) ) ) if not ( all_members ) and not ( project_member_ids ) : response = requests . post ( url , data = { 'subject' : subject , 'message' : message } ) handle_error...
def _at ( self , t ) : """Compute the GCRS position and velocity of this Topos at time ` t ` ."""
pos , vel = terra ( self . latitude . radians , self . longitude . radians , self . elevation . au , t . gast ) pos = einsum ( 'ij...,j...->i...' , t . MT , pos ) vel = einsum ( 'ij...,j...->i...' , t . MT , vel ) if self . x : R = rot_y ( self . x * ASEC2RAD ) pos = einsum ( 'ij...,j...->i...' , R , pos ) if s...
def helical_turbulent_Nu_Schmidt ( Re , Pr , Di , Dc ) : r'''Calculates Nusselt number for a fluid flowing inside a curved pipe such as a helical coil under turbulent conditions , using the method of Schmidt [ 1 ] _ , also shown in [ 2 ] _ , [ 3 ] _ , and [ 4 ] _ . For : math : ` Re _ { crit } < Re < 2.2 \ ti...
D_ratio = Di / Dc if Re <= 2.2E4 : term = Re ** ( 0.8 - 0.22 * D_ratio ** 0.1 ) * Pr ** ( 1 / 3. ) return 0.023 * ( 1. + 14.8 * ( 1. + D_ratio ) * D_ratio ** ( 1 / 3. ) ) * term else : return 0.023 * ( 1. + 3.6 * ( 1. - D_ratio ) * D_ratio ** 0.8 ) * Re ** 0.8 * Pr ** ( 1 / 3. )