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def swaplevel ( self , i = - 2 , j = - 1 , copy = True ) : """Swap levels i and j in a MultiIndex . Parameters i , j : int , str ( can be mixed ) Level of index to be swapped . Can pass level name as string . Returns Series Series with levels swapped in MultiIndex . . . versionchanged : : 0.18.1 The...
new_index = self . index . swaplevel ( i , j ) return self . _constructor ( self . _values , index = new_index , copy = copy ) . __finalize__ ( self )
def count_lines_to_next_cell ( cell_end_marker , next_cell_start , total , explicit_eoc ) : """How many blank lines between end of cell marker and next cell ?"""
if cell_end_marker < total : lines_to_next_cell = next_cell_start - cell_end_marker if explicit_eoc : lines_to_next_cell -= 1 if next_cell_start >= total : lines_to_next_cell += 1 return lines_to_next_cell return 1
def maps_re_apply_policy_input_rbridge_id ( self , ** kwargs ) : """Auto Generated Code"""
config = ET . Element ( "config" ) maps_re_apply_policy = ET . Element ( "maps_re_apply_policy" ) config = maps_re_apply_policy input = ET . SubElement ( maps_re_apply_policy , "input" ) rbridge_id = ET . SubElement ( input , "rbridge-id" ) rbridge_id . text = kwargs . pop ( 'rbridge_id' ) callback = kwargs . pop ( 'ca...
def guess_encoding ( self ) : """Guess encoding using the language , falling back on chardet . : return : the guessed encoding . : rtype : str"""
logger . info ( 'Guessing encoding for language %s' , self . language ) # always try utf - 8 first encodings = [ 'utf-8' ] # add language - specific encodings if self . language . alpha3 == 'zho' : encodings . extend ( [ 'gb18030' , 'big5' ] ) elif self . language . alpha3 == 'jpn' : encodings . append ( 'shift...
def GET_AUTH ( self , courseid ) : # pylint : disable = arguments - differ """GET request"""
course , __ = self . get_course_and_check_rights ( courseid , allow_all_staff = False ) return self . show_page ( course , web . input ( ) )
def _get_python_cmd ( self ) : """return the python executable in the virtualenv . Try first sys . executable but use fallbacks ."""
file_names = [ "pypy.exe" , "python.exe" , "python" ] executable = sys . executable if executable is not None : executable = os . path . split ( executable ) [ 1 ] file_names . insert ( 0 , executable ) return self . _get_bin_file ( * file_names )
def get_valid_build_systems ( working_dir , package = None ) : """Returns the build system classes that could build the source in given dir . Args : working _ dir ( str ) : Dir containing the package definition and potentially build files . package ( ` Package ` ) : Package to be built . This may or may not...
from rez . plugin_managers import plugin_manager from rez . exceptions import PackageMetadataError try : package = package or get_developer_package ( working_dir ) except PackageMetadataError : # no package , or bad package pass if package : if getattr ( package , "build_command" , None ) is not None : ...
def basicConfig ( level = logging . WARNING , transient_level = logging . NOTSET ) : """Shortcut for setting up transient logging I am a replica of ` ` logging . basicConfig ` ` which installs a transient logging handler to stderr ."""
fmt = "%(asctime)s [%(levelname)s] [%(name)s:%(lineno)d] %(message)s" logging . root . setLevel ( transient_level ) # < - - - IMPORTANT hand = TransientStreamHandler ( level = level ) hand . setFormatter ( logging . Formatter ( fmt ) ) logging . root . addHandler ( hand )
def validate_unwrap ( self , value , session = None ) : '''Validates that the DBRef is valid as well as can be done without retrieving it .'''
if not isinstance ( value , DBRef ) : self . _fail_validation_type ( value , DBRef ) if self . type : expected = self . type . type . get_collection_name ( ) got = value . collection if expected != got : self . _fail_validation ( value , '''Wrong collection for reference: ''' '''got "%s" instead...
def _set_tlv_type ( self , v , load = False ) : """Setter method for tlv _ type , mapped from YANG variable / protocol / cfm / domain _ name / ma _ name / cfm _ ma _ sub _ commands / mep / cfm _ mep _ sub _ commands / tlv _ type ( ccm - tlv - type ) If this variable is read - only ( config : false ) in the sour...
if hasattr ( v , "_utype" ) : v = v . _utype ( v ) try : t = YANGDynClass ( v , base = RestrictedClassType ( base_type = unicode , restriction_type = "dict_key" , restriction_arg = { u'port-status-tlv' : { 'value' : 1 } } , ) , is_leaf = True , yang_name = "tlv-type" , rest_name = "tlv-type" , parent = self , p...
def get_parent_log_nodes ( self ) : """Gets the parents of this log . return : ( osid . logging . LogNodeList ) - the parents of this log * compliance : mandatory - - This method must be implemented . *"""
parent_log_nodes = [ ] for node in self . _my_map [ 'parentNodes' ] : parent_log_nodes . append ( LogNode ( node . _my_map , runtime = self . _runtime , proxy = self . _proxy , lookup_session = self . _lookup_session ) ) return LogNodeList ( parent_log_nodes )
def add_lifecycle_delete_rule ( self , ** kw ) : """Add a " delete " rule to lifestyle rules configured for this bucket . See https : / / cloud . google . com / storage / docs / lifecycle and https : / / cloud . google . com / storage / docs / json _ api / v1 / buckets . . literalinclude : : snippets . py :...
rules = list ( self . lifecycle_rules ) rules . append ( LifecycleRuleDelete ( ** kw ) ) self . lifecycle_rules = rules
def pkg ( pkg_path , pkg_sum , hash_type , test = None , ** kwargs ) : '''Execute a packaged state run , the packaged state run will exist in a tarball available locally . This packaged state can be generated using salt - ssh . CLI Example : . . code - block : : bash salt ' * ' state . pkg / tmp / salt _ ...
# TODO - Add ability to download from salt master or other source popts = salt . utils . state . get_sls_opts ( __opts__ , ** kwargs ) if not os . path . isfile ( pkg_path ) : return { } if not salt . utils . hashutils . get_hash ( pkg_path , hash_type ) == pkg_sum : return { } root = tempfile . mkdtemp ( ) s_p...
def generate_request_access_signature ( parameters , secret_key ) : """Generate the parameter signature used during third party access requests"""
# pull out the parameter keys keys = parameters . keys ( ) # alphanumerically sort the keys in place keys . sort ( ) # create an array of url encoded key : value pairs encoded_pairs = [ urlencode ( { key : parameters [ key ] } ) for key in keys ] # create the serialized parameters in a single , URL style string seriali...
def stylize ( obj , style = 'plastique' , theme = 'projexui' ) : """Styles the inputed object with the given options . : param obj | < QtGui . QWidget > | | < QtGui . QApplication > style | < str > base | < str >"""
obj . setStyle ( style ) if theme : sheet = resources . read ( 'styles/{0}/style.css' . format ( theme ) ) if sheet : obj . setStyleSheet ( sheet )
def do_counter_conversion ( self ) : """Update latest value to the diff between it and the previous value"""
if self . is_counter : if self . _previous_counter_value is None : prev_value = self . latest_value else : prev_value = self . _previous_counter_value self . _previous_counter_value = self . latest_value self . latest_value = self . latest_value - prev_value
def collections ( self , values ) : """Set list of collections ."""
# if cache server is configured , save collection list if self . cache : self . cache . set ( self . app . config [ 'COLLECTIONS_CACHE_KEY' ] , values )
def register_inline_handler ( self , callback , * custom_filters , state = None , run_task = None , ** kwargs ) : """Register handler for inline query Example : . . code - block : : python3 dp . register _ inline _ handler ( some _ inline _ handler , lambda inline _ query : True ) : param callback : : par...
if custom_filters is None : custom_filters = [ ] filters_set = self . filters_factory . resolve ( self . inline_query_handlers , * custom_filters , state = state , ** kwargs ) self . inline_query_handlers . register ( self . _wrap_async_task ( callback , run_task ) , filters_set )
def _list_records ( self , rtype = None , name = None , content = None ) : """Connects to Hetzner account and returns a list of records filtered by record rtype , name and content . The list is empty if no records found ."""
with self . _session ( self . domain , self . domain_id ) as ddata : name = self . _fqdn_name ( name ) if name else None return self . _list_records_in_zone ( ddata [ 'zone' ] [ 'data' ] , rtype , name , content )
def upload ( ) : """Uploads an artifact referenced by a run ."""
build = g . build utils . jsonify_assert ( len ( request . files ) == 1 , 'Need exactly one uploaded file' ) file_storage = request . files . values ( ) [ 0 ] data = file_storage . read ( ) content_type , _ = mimetypes . guess_type ( file_storage . filename ) artifact = _save_artifact ( build , data , content_type ) db...
def late ( ) : """Used by functions in package . py that are evaluated lazily . The term ' late ' refers to the fact these package attributes are evaluated late , ie when the attribute is queried for the first time . If you want to implement a package . py attribute as a function , you MUST use this decorat...
from rez . package_resources_ import package_rex_keys def decorated ( fn ) : # this is done here rather than in standard schema validation because # the latter causes a very obfuscated error message if fn . __name__ in package_rex_keys : raise ValueError ( "Cannot use @late decorator on function '%s'" % fn ...
def _rise_set_trig ( t , target , location , prev_next , rise_set ) : """Crude time at next rise / set of ` ` target ` ` using spherical trig . This method is ~ 15 times faster than ` _ calcriseset ` , and inherently does * not * take the atmosphere into account . The time returned should not be used in calcu...
dec = target . transform_to ( coord . ICRS ) . dec with warnings . catch_warnings ( ) : warnings . simplefilter ( 'ignore' ) # ignore astropy deprecation warnings lat = location . latitude cosHA = - np . tan ( dec ) * np . tan ( lat . radian ) # find the absolute value of the hour Angle HA = coord . Longitu...
async def update ( self ) : """Update sirbot Trigger the update method of the plugins . This is needed if the plugins need to perform update migration ( i . e database )"""
logger . info ( 'Updating Sir Bot-a-lot' ) for name , plugin in self . _plugins . items ( ) : plugin_update = getattr ( plugin [ 'plugin' ] , 'update' , None ) if callable ( plugin_update ) : logger . info ( 'Updating %s' , name ) await plugin_update ( self . config . get ( name , { } ) , self ....
def get_model_voice ( self , app , model_item ) : """Model voice Returns the js menu compatible voice dict if the user can see it , None otherwise"""
if model_item . get ( 'name' , None ) is None : raise ImproperlyConfigured ( 'Model menu voices must have a name key' ) # noqa if self . check_model_permission ( app , model_item . get ( 'name' , None ) ) : return { 'type' : 'model' , 'label' : model_item . get ( 'label' , '' ) , 'icon' : model_item . get ( 'ic...
def _load_data ( self ) : """Load all fixtures from : attr : ` fixtures _ dir `"""
filenames = [ ] model_identifiers = defaultdict ( list ) # attempt to load fixture files from given directories ( first pass ) # for each valid model fixture file , read it into the cache and get the # list of identifier keys from it for fixtures_dir in self . fixture_dirs : for filename in os . listdir ( fixtures_...
def setIcon ( self , icon ) : """Sets the icon for this hotspot . If this method is called with a valid icon , then the style will automatically switch to Icon , otherwise , the style will be set to Invisible . : param icon | < QIcon > | | < str > | | None"""
icon = QIcon ( icon ) if icon . isNull ( ) : self . _icon = None self . _style = XNodeHotspot . Style . Invisible else : self . _icon = icon self . _style = XNodeHotspot . Style . Icon
def profile_get ( user , default_hidden = True ) : '''List profiles for user user : string username default _ hidden : boolean hide default profiles CLI Example : . . code - block : : bash salt ' * ' rbac . profile _ get leo salt ' * ' rbac . profile _ get leo default _ hidden = False'''
user_profiles = [ ] # # read user _ attr file ( user : qualifier : res1 : res2 : attr ) with salt . utils . files . fopen ( '/etc/user_attr' , 'r' ) as user_attr : for profile in user_attr : profile = salt . utils . stringutils . to_unicode ( profile ) profile = profile . strip ( ) . split ( ':' ) ...
def copy_entry_to_entry ( self , fromentry , destentry , check_for_dupes = True , compare_to_existing = True ) : """Used by ` merge _ duplicates `"""
self . log . info ( "Copy entry object '{}' to '{}'" . format ( fromentry [ fromentry . _KEYS . NAME ] , destentry [ destentry . _KEYS . NAME ] ) ) newsourcealiases = { } if self . proto . _KEYS . SOURCES in fromentry : for source in fromentry [ self . proto . _KEYS . SOURCES ] : alias = source . pop ( SOUR...
def move_round_to ( self , points , steps ) : """Follow a path pre - defined by a set of at least 4 points . This Path will interpolate the points into a curve and follow that curve . : param points : The list of points that defines the path . : param steps : The number of steps to take to follow the path .""...
# Spline interpolation needs a before and after point for the curve . # Duplicate the first and last points to handle this . We also need # to move from the current position to the first specified point . points . insert ( 0 , ( self . _rec_x , self . _rec_y ) ) points . insert ( 0 , ( self . _rec_x , self . _rec_y ) )...
def nearest_tile_to_node_using_tiles ( tile_ids , node_coord ) : """Get the first tile found adjacent to the given node . Returns a tile identifier . : param tile _ ids : tiles to look at for adjacency , list ( Tile . tile _ id ) : param node _ coord : node coordinate to find an adjacent tile to , int : retur...
for tile_id in tile_ids : if node_coord - tile_id_to_coord ( tile_id ) in _tile_node_offsets . keys ( ) : return tile_id logging . critical ( 'Did not find a tile touching node={}' . format ( node_coord ) )
def _DoSection ( args , context , callback , trace ) : """{ . section foo }"""
block = args # If a section present and " true " , push the dictionary onto the stack as the # new context , and show it if context . PushSection ( block . section_name , block . pre_formatters ) : _Execute ( block . Statements ( ) , context , callback , trace ) context . Pop ( ) else : # missing or " false " -...
def _downcase_word ( text , pos ) : """Lowercase the current ( or following ) word ."""
text , new_pos = _forward_word ( text , pos ) return text [ : pos ] + text [ pos : new_pos ] . lower ( ) + text [ new_pos : ] , new_pos
def set_paths ( etc_paths = [ "/etc/" ] ) : """Sets the paths where the configuration files will be searched * You can have multiple configuration files ( e . g . in the / etc / default folder and in / etc / appfolder / )"""
global _ETC_PATHS _ETC_PATHS = [ ] for p in etc_paths : _ETC_PATHS . append ( os . path . expanduser ( p ) )
def add_years ( datetime_like_object , n , return_date = False ) : """Returns a time that n years after a time . : param datetimestr : a datetime object or a datetime str : param n : number of years , value can be negative : param return _ date : returns a date object instead of datetime * * 中文文档 * * 返回给定...
a_datetime = parser . parse_datetime ( datetime_like_object ) # try assign year , month , day try : a_datetime = datetime ( a_datetime . year + n , a_datetime . month , a_datetime . day , a_datetime . hour , a_datetime . minute , a_datetime . second , a_datetime . microsecond , tzinfo = a_datetime . tzinfo , ) exce...
def availability_set_get ( name , resource_group , ** kwargs ) : '''. . versionadded : : 2019.2.0 Get a dictionary representing an availability set ' s properties . : param name : The availability set to get . : param resource _ group : The resource group name assigned to the availability set . CLI Exampl...
compconn = __utils__ [ 'azurearm.get_client' ] ( 'compute' , ** kwargs ) try : av_set = compconn . availability_sets . get ( resource_group_name = resource_group , availability_set_name = name ) result = av_set . as_dict ( ) except CloudError as exc : __utils__ [ 'azurearm.log_cloud_error' ] ( 'compute' , s...
def cleanup_failed_attacks ( self ) : """Cleans up data of failed attacks ."""
print_header ( 'Cleaning up failed attacks' ) attacks_to_replace = { } self . attack_work . read_all_from_datastore ( ) failed_submissions = set ( ) error_msg = set ( ) for k , v in iteritems ( self . attack_work . work ) : if v [ 'error' ] is not None : attacks_to_replace [ k ] = dict ( v ) failed_...
def parse ( self , text ) : """The parser entry point . Parse the provided text to check for its validity . On success , the parsing tree is available into the result attribute . It is a list of sievecommands . Command objects ( see the module documentation for specific information ) . On error , an strin...
if isinstance ( text , text_type ) : text = text . encode ( "utf-8" ) self . __reset_parser ( ) try : for ttype , tvalue in self . lexer . scan ( text ) : if ttype == "hash_comment" : self . hash_comments += [ tvalue . strip ( ) ] continue if ttype == "bracket_comment" : ...
def mi ( mi , iq = None , pl = None ) : # pylint : disable = redefined - outer - name """This function is a wrapper for : meth : ` ~ pywbem . WBEMConnection . ModifyInstance ` . Modify the property values of an instance . Parameters : mi ( : class : ` ~ pywbem . CIMInstance ` ) : Modified instance , also ...
CONN . ModifyInstance ( mi , IncludeQualifiers = iq , PropertyList = pl )
def rpush ( self , name , * values ) : """Push the value into the list from the * right * side : param name : str the name of the redis key : param values : a list of values or single value to push : return : Future ( )"""
with self . pipe as pipe : v_encode = self . valueparse . encode values = [ v_encode ( v ) for v in self . _parse_values ( values ) ] return pipe . rpush ( self . redis_key ( name ) , * values )
def as_blocks ( self , copy = True ) : """Convert the frame to a dict of dtype - > Constructor Types that each has a homogeneous dtype . . . deprecated : : 0.21.0 NOTE : the dtypes of the blocks WILL BE PRESERVED HERE ( unlike in as _ matrix ) Parameters copy : boolean , default True Returns values ...
warnings . warn ( "as_blocks is deprecated and will " "be removed in a future version" , FutureWarning , stacklevel = 2 ) return self . _to_dict_of_blocks ( copy = copy )
def increment_cell_value ( self , column_family_id , column , int_value ) : """Increments a value in an existing cell . Assumes the value in the cell is stored as a 64 bit integer serialized to bytes . . . note : : This method adds a read - modify rule protobuf to the accumulated read - modify rules on th...
column = _to_bytes ( column ) rule_pb = data_v2_pb2 . ReadModifyWriteRule ( family_name = column_family_id , column_qualifier = column , increment_amount = int_value , ) self . _rule_pb_list . append ( rule_pb )
def get_suitable_slot_for_duplicate ( self , src_slot ) : """Returns the suitable position for a duplicate analysis , taking into account if there is a WorksheetTemplate assigned to this worksheet . By default , returns a new slot at the end of the worksheet unless there is a slot defined for a duplicate of t...
slot_from = to_int ( src_slot , 0 ) if slot_from < 1 : return - 1 # Are the analyses from src _ slot suitable for duplicates creation ? container = self . get_container_at ( slot_from ) if not container or not IAnalysisRequest . providedBy ( container ) : # We cannot create duplicates from analyses other than routi...
async def unpinChatMessage ( self , chat_id ) : """See : https : / / core . telegram . org / bots / api # unpinchatmessage"""
p = _strip ( locals ( ) ) return await self . _api_request ( 'unpinChatMessage' , _rectify ( p ) )
def get ( self , variable_path : str , default : t . Optional [ t . Any ] = None , coerce_type : t . Optional [ t . Type ] = None , coercer : t . Optional [ t . Callable ] = None , ** kwargs ) : """Reads a value of ` ` variable _ path ` ` from environment . If ` ` coerce _ type ` ` is ` ` bool ` ` and no ` ` coer...
var_name = self . get_env_var_name ( variable_path ) val = self . env . get ( var_name , self . sentinel ) if val is self . sentinel : return default # coerce to bool with default env coercer if no coercer specified if coerce_type and coerce_type is bool and not coercer : coercer = coerce_str_to_bool return sel...
def iflat_tasks_wti ( self , status = None , op = "==" , nids = None ) : """Generator to iterate over all the tasks of the ` Flow ` . Yields : ( task , work _ index , task _ index ) If status is not None , only the tasks whose status satisfies the condition ( task . status op status ) are selected status ...
return self . _iflat_tasks_wti ( status = status , op = op , nids = nids , with_wti = True )
def _recv_thread ( self ) : """Internal thread to iterate over source messages and dispatch callbacks ."""
for msg , metadata in self . _source : if msg . msg_type : self . _call ( msg , ** metadata ) # Break any upstream iterators for sink in self . _sinks : i = sink ( ) if i is not None : i . breakiter ( ) self . _dead = True
def string_profiler ( string , start_delimiter = '(' , end_delimiter = ')' , remove = True ) : '''long = ' ( life is is good ) love world " ( blah ) blah " " here I am " once again " yes " blah ' print ( string _ profiler ( long ) ) null = ' ' print ( string _ profiler ( null ) ) short = ' ( life love ) yes...
mark = 0 string_list = [ ] tmp_string = '' for i in range ( len ( string ) ) : curr_index = i + mark if curr_index == len ( string ) : break if string [ curr_index ] == start_delimiter : flag = True else : flag = False if flag : if tmp_string : string_list...
def readlink ( link ) : """readlink ( link ) - > target Return a string representing the path to which the symbolic link points ."""
handle = api . CreateFile ( link , 0 , 0 , None , api . OPEN_EXISTING , api . FILE_FLAG_OPEN_REPARSE_POINT | api . FILE_FLAG_BACKUP_SEMANTICS , None , ) if handle == api . INVALID_HANDLE_VALUE : raise WindowsError ( ) res = reparse . DeviceIoControl ( handle , api . FSCTL_GET_REPARSE_POINT , None , 10240 ) bytes = ...
def step ( self , data ) : """Run convolution over a single position . The data must be exactly as wide as the convolution filters . : param data : Shape : ( batch _ size , kernel _ width , num _ hidden ) . : return : Single result of a convolution . Shape : ( batch _ size , 1 , num _ hidden ) ."""
# As we only run convolution over a single window that is exactly the size of the convolutional filter # we can use FullyConnected instead of Convolution for efficiency reasons . Additionally we do not need to # perform any masking . num_hidden = self . _pre_activation_num_hidden ( ) # ( batch _ size , num _ hidden , k...
def nearest_neighbor ( self , vectors , num = 10 , batch_size = 100 , show_progressbar = False , return_names = True ) : """Find the nearest neighbors to some arbitrary vector . This function is meant to be used in composition operations . The most _ similar function can only handle items that are in vocab , an...
vectors = np . array ( vectors ) if np . ndim ( vectors ) == 1 : vectors = vectors [ None , : ] result = [ ] result = self . _batch ( vectors , batch_size , num + 1 , show_progressbar , return_names ) return list ( result )
def query_boost_version ( boost_root ) : '''Read in the Boost version from a given boost _ root .'''
boost_version = None if os . path . exists ( os . path . join ( boost_root , 'Jamroot' ) ) : with codecs . open ( os . path . join ( boost_root , 'Jamroot' ) , 'r' , 'utf-8' ) as f : for line in f . readlines ( ) : parts = line . split ( ) if len ( parts ) >= 5 and parts [ 1 ] == 'BO...
def _detect ( detector , st , threshold , trig_int , moveout = 0 , min_trig = 0 , process = True , extract_detections = False , cores = 1 , debug = 0 ) : """Detect within continuous data using the subspace method . Not to be called directly , use the detector . detect method . : type detector : eqcorrscan . cor...
detections = [ ] # First process the stream if process : debug_print ( 'Processing Stream' , 0 , debug ) stream , stachans = _subspace_process ( streams = [ st . copy ( ) ] , lowcut = detector . lowcut , highcut = detector . highcut , filt_order = detector . filt_order , sampling_rate = detector . sampling_rate...
def newest_packages ( pypi_server = "https://pypi.python.org/pypi?%3Aaction=packages_rss" ) : """Constructs a request to the PyPI server and returns a list of : class : ` yarg . parse . Package ` . : param pypi _ server : ( option ) URL to the PyPI server . > > > import yarg > > > yarg . newest _ packages (...
items = _get ( pypi_server ) i = [ ] for item in items : i_dict = { 'name' : item [ 0 ] . text . split ( ) [ 0 ] , 'url' : item [ 1 ] . text , 'description' : item [ 3 ] . text , 'date' : item [ 4 ] . text } i . append ( Package ( i_dict ) ) return i
def dispatch ( self , request , * args , ** kwargs ) : '''Handle the session data passed by the prior view .'''
lessonSession = request . session . get ( PRIVATELESSON_VALIDATION_STR , { } ) try : self . lesson = PrivateLessonEvent . objects . get ( id = lessonSession . get ( 'lesson' ) ) except ( ValueError , ObjectDoesNotExist ) : messages . error ( request , _ ( 'Invalid lesson identifier passed to sign-up form.' ) ) ...
from typing import List def max_jumps ( nums : List [ int ] , target : int ) -> int : """Calculate the maximum number of jumps to reach the end of the array , obeying the condition that the absolute difference between the starting and ending element of the jump should not exceed the target . Args : nums ( L...
n = len ( nums ) dp = [ 0 ] for i in range ( 1 , n ) : dp . append ( - 1 ) # Initialize the dp [ i ] with - 1 for j in range ( i ) : if - target <= nums [ j ] - nums [ i ] <= target : # absolute difference not exceeding the target if dp [ j ] != - 1 and ( dp [ i ] == - 1 or dp [ j ] + 1 ...
def write ( self , outputfile = 'out.pdb' , appended = False ) : """Save the second PDB file aligned to the first . If appended is True , both are saved as different chains ."""
# FIXME some cases don ' t work . matrix = self . get_matrix ( ** self . get_current_values ( ) ) out = open ( outputfile , 'w' ) atomid = 1 if appended : for line in open ( self . pdb1 ) : if not line . startswith ( 'ATOM' ) or ( line [ 21 ] != self . chain_1 and line [ 21 ] != ' ' ) : continue...
def load_raw_data ( assets , data_query_cutoff_times , expr , odo_kwargs , checkpoints = None ) : """Given an expression representing data to load , perform normalization and forward - filling and return the data , materialized . Only accepts data with a ` sid ` field . Parameters assets : pd . int64index ...
lower_dt , upper_dt = data_query_cutoff_times [ [ 0 , - 1 ] ] raw = ffill_query_in_range ( expr , lower_dt , upper_dt , checkpoints = checkpoints , odo_kwargs = odo_kwargs , ) sids = raw [ SID_FIELD_NAME ] raw . drop ( sids [ ~ sids . isin ( assets ) ] . index , inplace = True ) return raw
def subseq ( cls , fasta , start = None , stop = None , strand = None ) : """Take Bio . SeqRecord and slice " start : stop " from it , does proper index and error handling"""
start = start - 1 if start is not None else 0 stop = stop if stop is not None else len ( fasta ) if start < 0 : msg = "start ({0}) must > 0 of `{1}`. Reset to 1" . format ( start + 1 , fasta . id ) logging . error ( msg ) start = 0 if stop > len ( fasta ) : msg = "stop ({0}) must be <= length of `{1}` (...
def _format_obj ( self , item = None ) : """Determines the type of the object and maps it to the correct formatter"""
# Order here matters , odd behavior with tuples if item is None : return getattr ( self , 'number' ) ( item ) elif isinstance ( item , self . str_ ) : # : String return item + " " elif isinstance ( item , bytes ) : # : Bytes return getattr ( self , 'bytes' ) ( item ) elif isinstance ( item , self . numeric_...
def ADD ( self , params ) : """ADD [ Rx , ] Ry , [ Rz , PC ] ADD [ Rx , ] [ SP , PC ] , # imm10_4 ADD [ SP , ] SP , # imm9_4 Add Ry and Rz and store the result in Rx Rx , Ry , and Rz can be any register If Rx is omitted , then it is assumed to be Ry"""
# This instruction allows for an optional destination register # If it is omitted , then it is assumed to be Rb # As defined in http : / / infocenter . arm . com / help / index . jsp ? topic = / com . arm . doc . dui0662b / index . html # TODO can we have ADD SP , # imm9_4? try : Rx , Ry , Rz = self . get_three_par...
def forward ( self , # pylint : disable = arguments - differ inputs : torch . Tensor , mask : torch . LongTensor ) -> torch . Tensor : """Parameters inputs : ` ` torch . Tensor ` ` , required . A Tensor of shape ` ` ( batch _ size , sequence _ length , hidden _ size ) ` ` . mask : ` ` torch . LongTensor ` ` ,...
batch_size , total_sequence_length = mask . size ( ) stacked_sequence_output , final_states , restoration_indices = self . sort_and_run_forward ( self . _lstm_forward , inputs , mask ) num_layers , num_valid , returned_timesteps , encoder_dim = stacked_sequence_output . size ( ) # Add back invalid rows which were remov...
def normalize_getitem_args ( args ) : '''Turns the arguments to _ _ getitem _ _ magic methods into a uniform list of tuples and strings'''
if not isinstance ( args , tuple ) : args = ( args , ) return_val = [ ] for arg in args : if isinstance ( arg , six . string_types + ( int , ) ) : return_val . append ( arg ) elif isinstance ( arg , slice ) : return_val . append ( ( arg . start , arg . stop ) ) else : raise TypeE...
def analysis ( self ) : """Get ANALYSIS segment of the FCS file ."""
if self . _analysis is None : with open ( self . path , 'rb' ) as f : self . read_analysis ( f ) return self . _analysis
def from_dict ( cls , d ) : """Decode a dictionary , as from : meth : ` to _ dict ` , into a Dmrs object ."""
def _node ( obj ) : return Node ( obj . get ( 'nodeid' ) , Pred . surface_or_abstract ( obj . get ( 'predicate' ) ) , sortinfo = obj . get ( 'sortinfo' ) , lnk = _lnk ( obj . get ( 'lnk' ) ) , surface = obj . get ( 'surface' ) , base = obj . get ( 'base' ) , carg = obj . get ( 'carg' ) ) def _link ( obj ) : ret...
def update_resource ( self , resource ) : '''Perform an atomic update for an existing resource'''
index = self . resources . index ( resource ) data = { 'resources__{index}' . format ( index = index ) : resource } self . update ( ** data ) self . reload ( ) post_save . send ( self . __class__ , document = self )
def find_next ( lines , find_str , start_index ) : """Find the next instance of find _ str from lines starting from start _ index . : param lines : Lines to look through : param find _ str : String or Invert to look for : param start _ index : Index to start from : return : ( boolean , index , line )"""
mode = None if isinstance ( find_str , basestring ) : mode = 'normal' message = find_str elif isinstance ( find_str , Invert ) : mode = 'invert' message = str ( find_str ) else : raise TypeError ( "Unsupported message type" ) for i in range ( start_index , len ( lines ) ) : if re . search ( mess...
def _get_frame ( self , key ) : """Creates a clone of the Layout with the nth - frame for each Element ."""
cached = self . current_key is None layout_frame = self . layout . clone ( shared_data = False ) if key == self . current_key and not self . _force : return self . current_frame else : self . current_key = key key_map = dict ( zip ( [ d . name for d in self . dimensions ] , key ) ) for path , item in self . lay...
async def _dump_tuple ( self , writer , elem , elem_type , params = None ) : """Dumps tuple of elements to the writer . : param writer : : param elem : : param elem _ type : : param params : : return :"""
if len ( elem ) != len ( elem_type . f_specs ( ) ) : raise ValueError ( "Fixed size tuple has not defined size: %s" % len ( elem_type . f_specs ( ) ) ) await dump_uvarint ( writer , len ( elem ) ) elem_fields = params [ 0 ] if params else None if elem_fields is None : elem_fields = elem_type . f_specs ( ) for i...
def check_window ( self , name = "default" , level = 0 , baseline = False ) : """* * * Automated Visual Testing with SeleniumBase * * * The first time a test calls self . check _ window ( ) for a unique " name " parameter provided , it will set a visual baseline , meaning that it creates a folder , saves the ...
if level == "0" : level = 0 if level == "1" : level = 1 if level == "2" : level = 2 if level == "3" : level = 3 if level != 0 and level != 1 and level != 2 and level != 3 : raise Exception ( 'Parameter "level" must be set to 0, 1, 2, or 3!' ) module = self . __class__ . __module__ if '.' in module a...
def nancorr ( a , b , method = 'pearson' , min_periods = None ) : """a , b : ndarrays"""
if len ( a ) != len ( b ) : raise AssertionError ( 'Operands to nancorr must have same size' ) if min_periods is None : min_periods = 1 valid = notna ( a ) & notna ( b ) if not valid . all ( ) : a = a [ valid ] b = b [ valid ] if len ( a ) < min_periods : return np . nan f = get_corr_func ( method )...
def walk ( node ) : """Iterate over all nodes . This is useful if you only want to modify nodes in place and don ' t care about the context or the order the nodes are returned ."""
from collections import deque todo = deque ( [ node ] ) while todo : node = todo . popleft ( ) todo . extend ( iter_child_nodes ( node ) ) yield node
def Unique ( a , t ) : """Unique op ."""
_ , idxs , inv = np . unique ( a , return_index = True , return_inverse = True ) return np . copy ( a ) [ np . sort ( idxs ) ] , idxs [ inv ] . astype ( dtype_map [ t ] )
def colorlog ( msg , color , bold = False , blink = False ) : """Colors messages on non - Windows systems supporting ANSI escape ."""
# ANSI Escape Codes PINK_COL = '\x1b[35m' GREEN_COL = '\x1b[32m' RED_COL = '\x1b[31m' YELLOW_COL = '\x1b[33m' BLINK = '\x1b[5m' RESET = '\x1b[0m' if platform . system ( ) != 'Windows' : if blink : msg = BLINK + msg + RESET if color == 'yellow' : msg = YELLOW_COL + msg + RESET if color == 're...
def check_isomorphism ( s1 : str , s2 : str ) -> bool : """A python function to assess if two given strings are isomorphic . Isomorphism exists if every character in string1 can be replaced to get string2. > > > check _ isomorphism ( ' paper ' , ' title ' ) True > > > check _ isomorphism ( ' ab ' , ' ba ' )...
map_s1 = { } map_s2 = { } for i , value in enumerate ( s1 ) : map_s1 [ value ] = map_s1 . get ( value , [ ] ) + [ i ] for i , value in enumerate ( s2 ) : map_s2 [ value ] = map_s2 . get ( value , [ ] ) + [ i ] return sorted ( map_s1 . values ( ) ) == sorted ( map_s2 . values ( ) )
def read_response ( self , delegate : httputil . HTTPMessageDelegate ) -> Awaitable [ bool ] : """Read a single HTTP response . Typical client - mode usage is to write a request using ` write _ headers ` , ` write ` , and ` finish ` , and then call ` ` read _ response ` ` . : arg delegate : a ` . HTTPMessageD...
if self . params . decompress : delegate = _GzipMessageDelegate ( delegate , self . params . chunk_size ) return self . _read_message ( delegate )
def match ( self , xn ) : """Processes a transaction against this rule If all conditions are satisfied , a list of outcomes is returned . If any condition is unsatisifed , None is returned ."""
if all ( map ( lambda x : x . match ( xn ) , self . conditions ) ) : return self . outcomes return None
def vcf2pileup ( vcf , sample ) : '''convert vcf record to pileup record .'''
chromosome = vcf . contig pos = vcf . pos reference = vcf . ref allelles = [ reference ] + vcf . alt data = vcf [ sample ] # get genotype genotypes = data [ "GT" ] if len ( genotypes ) > 1 : raise ValueError ( "only single genotype per position, %s" % ( str ( vcf ) ) ) genotypes = genotypes [ 0 ] # not a variant if...
def get ( self , idx , default = None ) : """Return the first placeholder shape with matching * idx * value , or * default * if not found ."""
for placeholder in self : if placeholder . element . ph_idx == idx : return placeholder return default
def updateLodState ( self , verbose = None ) : """Switch between full graphics details < - - - > fast rendering mode . Returns a success message . : param verbose : print more : returns : 200 : successful operation"""
response = api ( url = self . ___url + 'ui/lod' , method = "PUT" , verbose = verbose ) return response
def job_details ( job_id , connection = None ) : """Returns the job data with its scheduled timestamp . : param job _ id : the ID of the job to retrieve ."""
if connection is None : connection = r data = connection . hgetall ( job_key ( job_id ) ) job_data = { 'id' : job_id , 'schedule_at' : int ( connection . zscore ( REDIS_KEY , job_id ) ) } for key , value in data . items ( ) : try : decoded = value . decode ( 'utf-8' ) except UnicodeDecodeError : ...
def centroid_distance ( item_a , time_a , item_b , time_b , max_value ) : """Euclidean distance between the centroids of item _ a and item _ b . Args : item _ a : STObject from the first set in ObjectMatcher time _ a : Time integer being evaluated item _ b : STObject from the second set in ObjectMatcher t...
ax , ay = item_a . center_of_mass ( time_a ) bx , by = item_b . center_of_mass ( time_b ) return np . minimum ( np . sqrt ( ( ax - bx ) ** 2 + ( ay - by ) ** 2 ) , max_value ) / float ( max_value )
def in_casapy ( helper , vis = None ) : """This function is run inside the weirdo casapy IPython environment ! A strange set of modules is available , and the ` pwkit . environments . casa . scripting ` system sets up a very particular environment to allow encapsulated scripting ."""
import numpy as np , sys from correct_ant_posns import correct_ant_posns info = correct_ant_posns ( vis , False ) if len ( info ) != 3 or info [ 0 ] != 0 or not len ( info [ 1 ] ) : helper . die ( 'failed to fetch VLA antenna positions; got %r' , info ) antenna = info [ 1 ] parameter = info [ 2 ] with open ( helper...
def start ( self , measurementId ) : """Posts to the target to tell it a named measurement is starting . : param measurementId :"""
self . sendURL = self . rootURL + measurementId + '/' + self . deviceName self . startResponseCode = self . _doPut ( self . sendURL )
def route_delete ( name , route_table , resource_group , ** kwargs ) : '''. . versionadded : : 2019.2.0 Delete a route from a route table . : param name : The route to delete . : param route _ table : The route table containing the route . : param resource _ group : The resource group name assigned to the ...
result = False netconn = __utils__ [ 'azurearm.get_client' ] ( 'network' , ** kwargs ) try : route = netconn . routes . delete ( resource_group_name = resource_group , route_table_name = route_table , route_name = name ) route . wait ( ) result = True except CloudError as exc : __utils__ [ 'azurearm.log...
def go_to_parent_directory ( self ) : """Go to parent directory"""
self . chdir ( osp . abspath ( osp . join ( getcwd_or_home ( ) , os . pardir ) ) )
def escape_string ( value ) : """Converts a string to its S - expression representation , adding quotes and escaping funny characters ."""
res = StringIO ( ) res . write ( '"' ) for c in value : if c in CHAR_TO_ESCAPE : res . write ( f'\\{CHAR_TO_ESCAPE[c]}' ) elif c . isprintable ( ) : res . write ( c ) elif ord ( c ) < 0x100 : res . write ( f'\\x{ord(c):02x}' ) elif ord ( c ) < 0x10000 : res . write ( f'\\...
def p0f ( pkt ) : """Passive OS fingerprinting : which OS emitted this TCP packet ? p0f ( packet ) - > accuracy , [ list of guesses ]"""
db , sig = packet2p0f ( pkt ) if db : pb = db . get_base ( ) else : pb = [ ] if not pb : warning ( "p0f base empty." ) return [ ] # s = len ( pb [ 0 ] [ 0 ] ) r = [ ] max = len ( sig [ 4 ] . split ( "," ) ) + 5 for b in pb : d = p0f_correl ( sig , b ) if d == max : r . append ( ( b [ 6 ]...
def log ( self , sequence , infoarray ) -> None : """Pass the given | IoSequence | to a suitable instance of a | NetCDFVariableBase | subclass . When writing data , the second argument should be an | InfoArray | . When reading data , this argument is ignored . Simply pass | None | . (1 ) We prepare some dev...
aggregated = ( ( infoarray is not None ) and ( infoarray . info [ 'type' ] != 'unmodified' ) ) descr = sequence . descr_sequence if aggregated : descr = '_' . join ( [ descr , infoarray . info [ 'type' ] ] ) if descr in self . variables : var_ = self . variables [ descr ] else : if aggregated : cls ...
def updateRPYLocations ( self ) : '''Update the locations of roll , pitch , yaw text .'''
# Locations self . rollText . set_position ( ( self . leftPos + ( self . vertSize / 10.0 ) , - 0.97 + ( 2 * self . vertSize ) - ( self . vertSize / 10.0 ) ) ) self . pitchText . set_position ( ( self . leftPos + ( self . vertSize / 10.0 ) , - 0.97 + self . vertSize - ( 0.5 * self . vertSize / 10.0 ) ) ) self . yawText ...
async def getUpdates ( self , offset = None , limit = None , timeout = None , allowed_updates = None ) : """See : https : / / core . telegram . org / bots / api # getupdates"""
p = _strip ( locals ( ) ) return await self . _api_request ( 'getUpdates' , _rectify ( p ) )
def get_cert_file ( ) : """Get the certificates file for https"""
try : current_path = os . path . realpath ( __file__ ) ca_cert_path = os . path . join ( current_path , ".." , ".." , ".." , "conf" , "cacert.pem" ) return os . path . abspath ( ca_cert_path ) except Exception : return None
def sum_mags ( mags , weights = None ) : """Sum an array of magnitudes in flux space . Parameters : mags : array of magnitudes weights : array of weights for each magnitude ( i . e . from a pdf ) Returns : sum _ mag : the summed magnitude of all the stars"""
flux = 10 ** ( - np . asarray ( mags ) / 2.5 ) if weights is None : return - 2.5 * np . log10 ( np . sum ( flux ) ) else : return - 2.5 * np . log10 ( np . sum ( weights * flux ) )
def add_time_dependent_effects ( self , ts ) : """Given a timeseries , apply a model to it . Parameters ts : Time series of i . i . d . observations as a Numpy array returns the time series with added time - dependent effects as a Numpy array ."""
destts = Vectors . dense ( [ 0 ] * len ( ts ) ) result = self . _jmodel . addTimeDependentEffects ( _py2java ( self . _ctx , Vectors . dense ( ts ) ) , _py2java ( self . _ctx , destts ) ) return _java2py ( self . _ctx , result . toArray ( ) )
def _dmi_data ( dmi_raw , clean , fields ) : '''Parse the raw DMIdecode output of a single handle into a nice dict'''
dmi_data = { } key = None key_data = [ None , [ ] ] for line in dmi_raw : if re . match ( r'\t[^\s]+' , line ) : # Finish previous key if key is not None : # log . debug ( ' Evaluating DMI key { 0 } : { 1 } ' . format ( key , key _ data ) ) value , vlist = key_data if vlist : ...
def web_hook_receiver ( sender , ** kwargs ) : """Generic receiver for the web hook firing piece ."""
deployment = Deployment . objects . get ( pk = kwargs . get ( 'deployment_id' ) ) hooks = deployment . web_hooks if not hooks : return for hook in hooks : data = payload_generator ( deployment ) deliver_hook ( deployment , hook . url , data )
def pre_check ( self , data ) : """Count chars , words and sentences in the text ."""
sentences = len ( re . findall ( '[\.!?]+\W+' , data ) ) or 1 chars = len ( data ) - len ( re . findall ( '[^a-zA-Z0-9]' , data ) ) num_words = len ( re . findall ( '\s+' , data ) ) data = re . split ( '[^a-zA-Z]+' , data ) return data , sentences , chars , num_words
def _bind ( self ) : """bind to the ldap with the technical account"""
ldap_client = self . _connect ( ) try : ldap_client . simple_bind_s ( self . binddn , self . bindpassword ) except Exception as e : ldap_client . unbind_s ( ) self . _exception_handler ( e ) return ldap_client
def print_file ( self , f = sys . stdout , file_format = "cif" , tw = 0 ) : """Print : class : ` ~ nmrstarlib . nmrstarlib . CIFFile ` into a file or stdout . : param io . StringIO f : writable file - like stream . : param str file _ format : Format to use : ` cif ` or ` json ` . : param int tw : Tab width . ...
if file_format == "cif" : for key in self . keys ( ) : if key == u"data" : print ( u"{}_{}" . format ( key , self [ key ] ) , file = f ) elif key . startswith ( u"comment" ) : print ( u"{}" . format ( self [ key ] . strip ( ) ) , file = f ) elif key . startswith ( u"l...
def cache_get ( key ) : """Wrapper for ` ` cache . get ` ` . The expiry time for the cache entry is stored with the entry . If the expiry time has past , put the stale entry back into cache , and don ' t return it to trigger a fake cache miss ."""
packed = cache . get ( _hashed_key ( key ) ) if packed is None : return None value , refresh_time , refreshed = packed if ( time ( ) > refresh_time ) and not refreshed : cache_set ( key , value , settings . CACHE_SET_DELAY_SECONDS , True ) return None return value
def set_dependencies ( ctx , archive_name , dependency = None ) : '''Set the dependencies of an archive'''
_generate_api ( ctx ) kwargs = _parse_dependencies ( dependency ) var = ctx . obj . api . get_archive ( archive_name ) var . set_dependencies ( dependencies = kwargs )