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def _set_session ( ) : """Sets global _ _ SESSION and _ _ USER _ ID if they haven ' t been set"""
global __SESSION global __USER_ID if __SESSION is None : try : __SESSION = AuthorizedSession ( google . auth . default ( [ 'https://www.googleapis.com/auth/userinfo.profile' , 'https://www.googleapis.com/auth/userinfo.email' ] ) [ 0 ] ) health ( ) __USER_ID = id_token . verify_oauth2_token (...
def merge_stylesheets ( Class , fn , * cssfns ) : """merge the given CSS files , in order , into a single stylesheet . First listed takes priority ."""
stylesheet = Class ( fn = fn ) for cssfn in cssfns : css = Class ( fn = cssfn ) for sel in sorted ( css . styles . keys ( ) ) : if sel not in stylesheet . styles : stylesheet . styles [ sel ] = css . styles [ sel ] else : for prop in [ prop for prop in css . styles [ sel ...
def relative_probability_from_lookup_table ( self , jump_lookup_table ) : """Relative probability of accepting this jump from a lookup - table . Args : jump _ lookup _ table ( LookupTable ) : the lookup table to be used for this jump . Returns : ( Float ) : relative probability of accepting this jump ."""
l1 = self . initial_site . label l2 = self . final_site . label c1 = self . initial_site . nn_occupation ( ) c2 = self . final_site . nn_occupation ( ) return jump_lookup_table . jump_probability [ l1 ] [ l2 ] [ c1 ] [ c2 ]
def find_commands ( cls ) : """Finds commands by finding the subclasses of Command"""
cmds = [ ] for subclass in cls . __subclasses__ ( ) : cmds . append ( subclass ) cmds . extend ( find_commands ( subclass ) ) return cmds
def _relation_exists ( self , connection , relation ) : """Returns True if relation ( table or view ) exists in the sqlite db . Otherwise returns False . Args : connection ( apsw . Connection ) : connection to sqlite database who stores mpr data . partition ( orm . Partition ) : Returns : boolean : True i...
query = 'SELECT 1 FROM sqlite_master WHERE (type=\'table\' OR type=\'view\') AND name=?;' cursor = connection . cursor ( ) cursor . execute ( query , [ relation ] ) result = cursor . fetchall ( ) return result == [ ( 1 , ) ]
def setup_requires ( ) : """Return required packages Plus any version tests and warnings"""
from pkg_resources import parse_version required = [ 'cython>=0.24.0' ] numpy_requirement = 'numpy>=1.7.1' try : import numpy except Exception : required . append ( numpy_requirement ) else : if parse_version ( numpy . __version__ ) < parse_version ( '1.7.1' ) : required . append ( numpy_requirement...
def p_mp_setQualifier ( p ) : """mp _ setQualifier : qualifierDeclaration"""
qualdecl = p [ 1 ] ns = p . parser . handle . default_namespace if p . parser . verbose : p . parser . log ( _format ( "Setting qualifier {0!A}" , qualdecl . name ) ) try : p . parser . handle . SetQualifier ( qualdecl ) except CIMError as ce : if ce . status_code == CIM_ERR_INVALID_NAMESPACE : if p...
def add_element ( source , path , value , separator = r'[/.]' , ** kwargs ) : """Add element into a list or dict easily using a path . Parameter Type Description source list or dict element where add the value . path string path to add the value in element . value ¿ all ? value to add in source . separato...
return _add_element_by_names ( source , exclude_empty_values ( re . split ( separator , path ) ) , value , ** kwargs )
def set_subdata ( self , data , offset = 0 , copy = False ) : """Set a sub - region of the buffer ( deferred operation ) . Parameters data : ndarray Data to be uploaded offset : int Offset in buffer where to start copying data ( in bytes ) copy : bool Since the operation is deferred , data may change ...
data = np . array ( data , copy = copy ) nbytes = data . nbytes if offset < 0 : raise ValueError ( "Offset must be positive" ) elif ( offset + nbytes ) > self . _nbytes : raise ValueError ( "Data does not fit into buffer" ) # If the whole buffer is to be written , we clear any pending data # ( because they will...
def incr ( self , key , delta = 1 ) : """Add delta to value in the cache . If the key does not exist , raise a ValueError exception ."""
value = self . get ( key ) if value is None : raise ValueError ( "Key '%s' not found" % key ) new_value = value + delta self . set ( key , new_value ) return new_value
def setViewWidget ( self , viewWidget ) : """Sets the view widget linked with this toolbar . : param viewWidget | < XViewWidget >"""
self . _viewWidget = viewWidget if viewWidget : viewWidget . resetFinished . connect ( self . clearActive )
def validate ( self , val ) : """For a val to pass validation , val must be of the correct type and have all required fields present ."""
self . validate_type_only ( val ) self . validate_fields_only ( val ) return val
def duplicate ( self , parent ) : """Duplicates this current view for another . Subclass this method to provide any additional duplication options . : param parent | < QWidget > : return < XView > | instance of this class"""
# only return a single singleton instance if self . isViewSingleton ( ) : return self output = type ( self ) . createInstance ( parent , self . viewWidget ( ) ) # save / restore the current settings xdata = ElementTree . Element ( 'data' ) self . saveXml ( xdata ) new_name = output . objectName ( ) output . setObje...
def build_remap_symbols ( self , name_generator , children_only = None ) : """The children _ only flag is inapplicable , but this is included as the Scope class is defined like so . Here this simply just place the catch symbol with the next replacement available ."""
replacement = name_generator ( skip = ( self . _reserved_symbols ) ) self . remapped_symbols [ self . catch_symbol ] = next ( replacement ) # also to continue down the children . for child in self . children : child . build_remap_symbols ( name_generator , False )
def delete_existing_cname ( env , zone_id , dns_name ) : """Delete an existing CNAME record . This is used when updating to multi - region for deleting old records . The record can not just be upserted since it changes types . Args : env ( str ) : Deployment environment . zone _ id ( str ) : Route53 zone ...
client = boto3 . Session ( profile_name = env ) . client ( 'route53' ) startrecord = None newrecord_name = dns_name startrecord = find_existing_record ( env , zone_id , newrecord_name , check_key = 'Type' , check_value = 'CNAME' ) if startrecord : LOG . info ( "Deleting old record: %s" , newrecord_name ) _respo...
def to_dictionary ( self , key_selector = lambda item : item . key , value_selector = list ) : """Build a dictionary from the source sequence . Args : key _ selector : A unary callable to extract a key from each item . By default the key of the Grouping . value _ selector : A unary callable to extract a val...
return super ( Lookup , self ) . to_dictionary ( key_selector , value_selector )
def _assemble_and_send_request ( self ) : """Fires off the Fedex request . @ warning : NEVER CALL THIS METHOD DIRECTLY . CALL send _ request ( ) , WHICH RESIDES ON FedexBaseService AND IS INHERITED ."""
# Fire off the query . return self . client . service . processShipment ( WebAuthenticationDetail = self . WebAuthenticationDetail , ClientDetail = self . ClientDetail , TransactionDetail = self . TransactionDetail , Version = self . VersionId , RequestedShipment = self . RequestedShipment )
def traceroute ( domain , method = "udp" , cmd_arguments = None , external = None , log_prefix = '' ) : """This function uses centinel . command to issue a traceroute command , wait for it to finish execution and parse the results out to a dictionary . : param domain : the domain to be queried : param metho...
# the method specified by the function parameter here will # over - ride the ones given in cmd _ arguments because # traceroute will use the last one in the argument list . _cmd_arguments = [ ] logging . debug ( "%sRunning traceroute for " "%s using %s probes." % ( log_prefix , domain , method ) ) results = { "method" ...
def trim ( self , lower = None , upper = None ) : """Trim values in accordance with : math : ` WAeS \\ leq PWMax \\ cdot WATS ` . > > > from hydpy . models . lland import * > > > parameterstep ( ' 1d ' ) > > > nhru ( 7) > > > pwmax ( 2 . ) > > > states . wats = 0 . , 0 . , 0 . , 5 . , 5 . , 5 . , 5. > >...
pwmax = self . subseqs . seqs . model . parameters . control . pwmax wats = self . subseqs . wats if upper is None : upper = pwmax * wats lland_sequences . State1DSequence . trim ( self , lower , upper )
def units ( self , value ) : """Set the units for every model in the scene without converting any units just setting the tag . Parameters value : str Value to set every geometry unit value to"""
for m in self . geometry . values ( ) : m . units = value
def dropped ( self , param , event ) : """Adds the dropped parameter * param * into the protocol list . Re - implemented from : meth : ` AbstractDragView < sparkle . gui . abstract _ drag _ view . AbstractDragView . dropped > `"""
if event . source ( ) == self or isinstance ( param , AddLabel ) : index = self . indexAt ( event . pos ( ) ) self . model ( ) . insertRows ( index . row ( ) , 1 ) if event . source ( ) == self : self . model ( ) . setData ( index , param ) else : self . hintRequested . emit ( 'Select Co...
def _check_minions_directories ( self ) : '''Return the minion keys directory paths'''
minions_accepted = os . path . join ( self . opts [ 'pki_dir' ] , self . ACC ) minions_pre = os . path . join ( self . opts [ 'pki_dir' ] , self . PEND ) minions_rejected = os . path . join ( self . opts [ 'pki_dir' ] , self . REJ ) minions_denied = os . path . join ( self . opts [ 'pki_dir' ] , self . DEN ) return min...
def augment_pipeline ( pl , head_pipe = None , tail_pipe = None ) : """Augment the pipeline by adding a new pipe section to each stage that has one or more pipes . Can be used for debugging : param pl : : param DebugPipe : : return :"""
for k , v in iteritems ( pl ) : if v and len ( v ) > 0 : if head_pipe and k != 'source' : # Can ' t put anything before the source . v . insert ( 0 , head_pipe ) if tail_pipe : v . append ( tail_pipe )
def input ( self ) : """Dictionary access to all input variables That can be boundary conditions and other gridded quantities independent of the ` process ` : type : dict"""
input_dict = { } for key in self . _input_vars : try : input_dict [ key ] = getattr ( self , key ) except : pass return input_dict
def predictive_gradients ( self , Xnew , kern = None ) : """Compute the derivatives of the predicted latent function with respect to X * Given a set of points at which to predict X * ( size [ N * , Q ] ) , compute the derivatives of the mean and variance . Resulting arrays are sized : dmu _ dX * - - [ N * ,...
if kern is None : kern = self . kern mean_jac = np . empty ( ( Xnew . shape [ 0 ] , Xnew . shape [ 1 ] , self . output_dim ) ) for i in range ( self . output_dim ) : mean_jac [ : , : , i ] = kern . gradients_X ( self . posterior . woodbury_vector [ : , i : i + 1 ] . T , Xnew , self . _predictive_variable ) # Gr...
def _items ( self ) : """Parse url and yield namedtuple Torrent for every torrent on page"""
torrents = map ( self . _get_torrent , self . _get_rows ( ) ) for t in torrents : yield t
def term ( self , term , ** kwargs ) : """Adds a term to the current query , creating a Clause and adds it to the list of clauses making up this Query . The term is not tokenized and used " as is " . Any conversion to token or token - like strings should be performed before calling this method . For example...
if isinstance ( term , ( list , tuple ) ) : for t in term : self . term ( t , ** kwargs ) else : self . clause ( str ( term ) , ** kwargs ) return self
def tag ( self , tagname , message = None , force = True ) : """Create an annotated tag ."""
return git_tag ( self . repo_dir , tagname , message = message , force = force )
def _getRadius ( self , location ) : """Returns the radius associated with the given location . This is a bit of an awkward argument to the CoordinateEncoder , which specifies the resolution ( in was used to encode differently depending on speed in the GPS encoder ) . Since the coordinates are object - centri...
# TODO : find better heuristic return int ( math . sqrt ( sum ( [ coord ** 2 for coord in location ] ) ) )
def partition_horizontal_twice ( thelist , numbers ) : """numbers is split on a comma to n and n2. Break a list into peices each peice alternating between n and n2 items long ` ` partition _ horizontal _ twice ( range ( 14 ) , " 3,4 " ) ` ` gives : : [ [ 0 , 1 , 2 ] , [3 , 4 , 5 , 6 ] , [7 , 8 , 9 ] , [...
n , n2 = numbers . split ( ',' ) try : n = int ( n ) n2 = int ( n2 ) thelist = list ( thelist ) except ( ValueError , TypeError ) : return [ thelist ] newlists = [ ] while thelist : newlists . append ( thelist [ : n ] ) thelist = thelist [ n : ] newlists . append ( thelist [ : n2 ] ) the...
def unframe ( packet ) : """Strip leading DLE and trailing DLE / ETX from packet . : param packet : TSIP packet with leading DLE and trailing DLE / ETX . : type packet : Binary string . : return : TSIP packet with leading DLE and trailing DLE / ETX removed . : raise : ` ` ValueError ` ` if ` packet ` does n...
if is_framed ( packet ) : return packet . lstrip ( CHR_DLE ) . rstrip ( CHR_ETX ) . rstrip ( CHR_DLE ) else : raise ValueError ( 'packet does not contain leading DLE and trailing DLE/ETX' )
def lookup_effective_breakpoint ( cls , file_name , line_number , frame ) : """Checks if there is an enabled breakpoint at given file _ name and line _ number . Check breakpoint condition if any . : return : found , enabled and condition verified breakpoint or None : rtype : IKPdbBreakpoint or None"""
bp = cls . breakpoints_by_file_and_line . get ( ( file_name , line_number ) , None ) if not bp : return None if not bp . enabled : return None if not bp . condition : return bp try : value = eval ( bp . condition , frame . f_globals , frame . f_locals ) return bp if value else None except : pass...
def save_model ( self , fname ) : """Save the model to a file . The model is saved in an XGBoost internal binary format which is universal among the various XGBoost interfaces . Auxiliary attributes of the Python Booster object ( such as feature _ names ) will not be saved . To preserve all attributes , pic...
if isinstance ( fname , STRING_TYPES ) : # assume file name _check_call ( _LIB . XGBoosterSaveModel ( self . handle , c_str ( fname ) ) ) else : raise TypeError ( "fname must be a string" )
def kendalltau_dist ( params1 , params2 = None ) : r"""Compute the Kendall tau distance between two models . This function computes the Kendall tau distance between the rankings induced by two parameter vectors . Let : math : ` \ sigma _ i ` be the rank of item ` ` i ` ` in the model described by ` ` params1 ...
assert params2 is None or len ( params1 ) == len ( params2 ) ranks1 = rankdata ( params1 , method = "ordinal" ) if params2 is None : ranks2 = np . arange ( 1 , len ( params1 ) + 1 , dtype = float ) else : ranks2 = rankdata ( params2 , method = "ordinal" ) tau , _ = kendalltau ( ranks1 , ranks2 ) n_items = len (...
def setup_docstring_style_convention ( self , text ) : """Handle convention changes ."""
if text == 'Custom' : self . docstring_style_select . label . setText ( _ ( "Show the following errors:" ) ) self . docstring_style_ignore . label . setText ( _ ( "Ignore the following errors:" ) ) else : self . docstring_style_select . label . setText ( _ ( "Show the following errors in addition " "to the ...
def get_conf ( conf , sect , opt ) : """Gets a config ' opt ' from ' conf ' file , under section ' sect ' . If no ' opt ' exists under ' sect ' , it looks for option on the default _ configs dictionary If there exists an environmental variable named MAMBUPY _ { upper _ case _ opt } , it overrides whatever t...
argu = getattr ( args , "mambupy_" + opt . lower ( ) ) if not argu : envir = os . environ . get ( "MAMBUPY_" + opt . upper ( ) ) if not envir : try : return conf . get ( sect , opt ) except NoSectionError : return default_configs [ opt ] return envir return argu
def remote_daemon ( conf_file ) : """Run the external control daemon . : param conf _ file : Name of the configuration file ."""
eventlet . monkey_patch ( ) conf = config . Config ( conf_file = conf_file ) daemon = remote . RemoteControlDaemon ( None , conf ) daemon . serve ( )
def window ( iterable , n = 2 , s = 1 ) : r"""Move an ` n ` - item ( default 2 ) windows ` s ` steps ( default 1 ) at a time over ` iterable ` . Examples : > > > list ( window ( range ( 6 ) , 2 ) ) [ ( 0 , 1 ) , ( 1 , 2 ) , ( 2 , 3 ) , ( 3 , 4 ) , ( 4 , 5 ) ] > > > list ( window ( range ( 6 ) , 3 ) ) [ ...
assert n >= s last = [ ] for elt in iterable : last . append ( elt ) if len ( last ) == n : yield tuple ( last ) ; last = last [ s : ]
def load ( fp , encoding = None , cls = JSONTreeDecoder , object_hook = None , parse_float = None , parse_int = None , parse_constant = None , object_pairs_hook = None , ** kargs ) : """JSON load from file function that defaults the loading class to be JSONTreeDecoder"""
return json . load ( fp , encoding , cls , object_hook , parse_float , parse_int , parse_constant , object_pairs_hook , ** kargs )
def log ( self , txt : str ) -> bool : """Log txt ( if any ) to the log file ( if any ) . Return value indicates whether it is ok to terminate on the first error or whether we need to continue processing . : param txt : text to log . : return : True if we aren ' t logging , False if we are ."""
self . nerrors += 1 if self . _logfile is not None : print ( txt , file = self . _logfile ) return not self . logging
def delete_object ( connection , container : str , object_meta_data : dict ) -> None : """Delete single object from objectstore"""
connection . delete_object ( container , object_meta_data [ 'name' ] )
def setFormatMetadata ( self , format ) : """Set format image metadata to what has been reliably identified ."""
assert ( ( self . needMetadataUpdate ( CoverImageMetadata . FORMAT ) ) or ( self . format is format ) ) self . format = format self . check_metadata &= ~ CoverImageMetadata . FORMAT
def decompress_file ( filepath ) : """Decompresses a file with the correct extension . Automatically detects gz , bz2 or z extension . Args : filepath ( str ) : Path to file . compression ( str ) : A compression mode . Valid options are " gz " or " bz2 " . Defaults to " gz " ."""
toks = filepath . split ( "." ) file_ext = toks [ - 1 ] . upper ( ) from monty . io import zopen if file_ext in [ "BZ2" , "GZ" , "Z" ] : with open ( "." . join ( toks [ 0 : - 1 ] ) , 'wb' ) as f_out , zopen ( filepath , 'rb' ) as f_in : f_out . writelines ( f_in ) os . remove ( filepath )
def _make_request ( self , url , ** kwargs ) : """Make a request to an OAuth2 endpoint"""
response = requests . post ( url , ** kwargs ) try : return response . json ( ) except ValueError : pass return parse_qs ( response . content )
def compute ( self , rtdc_ds ) : """Compute the feature with self . method Parameters rtdc _ ds : instance of RTDCBase The dataset to compute the feature for Returns feature : array - or list - like The computed data feature ( read - only ) ."""
data = self . method ( rtdc_ds ) dsize = len ( rtdc_ds ) - len ( data ) if dsize > 0 : msg = "Growing feature {} in {} by {} to match event number!" warnings . warn ( msg . format ( self . feature_name , rtdc_ds , abs ( dsize ) ) , BadFeatureSizeWarning ) data . resize ( len ( rtdc_ds ) , refcheck = False )...
def switch_user ( self , username , password ) : """Change the client ' s username . : param username : the username to switch to : type username : str : param password : the password for the username : type password : str"""
self . _username = username self . _password = password
def label ( self ) : """" Return first child that of the column that is marked as a label"""
for c in self . table . columns : if c . parent == self . name and 'label' in c . valuetype : return PartitionColumn ( c , self . _partition )
def validate_data_columns ( self , data_columns , min_itemsize ) : """take the input data _ columns and min _ itemize and create a data columns spec"""
if not len ( self . non_index_axes ) : return [ ] axis , axis_labels = self . non_index_axes [ 0 ] info = self . info . get ( axis , dict ( ) ) if info . get ( 'type' ) == 'MultiIndex' and data_columns : raise ValueError ( "cannot use a multi-index on axis [{0}] with " "data_columns {1}" . format ( axis , data_...
def from_yaml_file ( f ) : """Read a yaml file and convert to Python objects ( including rpcq messages ) ."""
return from_json ( to_json ( yaml . load ( f , Loader = yaml . Loader ) ) )
def validate_types ( schemas_and_tables ) : '''normalize a list of desired annotation types if passed None returns all types , otherwise checks that types exist Parameters types : list [ str ] or None Returns list [ str ] list of types Raises UnknownAnnotationTypeException If types contains an inv...
all_types = get_types ( ) if not ( all ( sn in all_types for sn , tn in schemas_and_tables ) ) : bad_types = [ sn for sn , tn in schemas_and_tables if sn not in all_types ] msg = '{} are invalid types' . format ( bad_types ) raise UnknownAnnotationTypeException ( msg )
def export_data ( self , phases = [ ] , filename = None , filetype = 'vtp' ) : r"""Export the pore and throat data from the given object ( s ) into the specified file and format . Parameters phases : list of OpenPNM Phase Objects The data on each supplied phase will be added to file filename : string Th...
project = self network = self . network if filename is None : filename = project . name + '_' + time . strftime ( '%Y%b%d_%H%M%p' ) # Infer filetype from extension on file name . . . if given if '.' in filename : exts = [ 'vtk' , 'vtp' , 'vtu' , 'csv' , 'xmf' , 'xdmf' , 'hdf' , 'hdf5' , 'h5' , 'mat' ] if fi...
def get_batch_result_ids ( self , job_id , batch_id ) : """Get result IDs of a batch that has completed processing . : param job _ id : job _ id as returned by ' create _ operation _ job ( . . . ) ' : param batch _ id : batch _ id as returned by ' create _ batch ( . . . ) ' : return : list of batch result IDs...
response = requests . get ( self . _get_batch_results_url ( job_id , batch_id ) , headers = self . _get_batch_info_headers ( ) ) response . raise_for_status ( ) root = ET . fromstring ( response . text ) result_ids = [ r . text for r in root . findall ( '%sresult' % self . API_NS ) ] return result_ids
def sample_dynamic_data ( params ) : """Helper function ."""
model_key = os . path . basename ( params [ 'model' ] ) . replace ( '.txt' , '' ) if 'writedir' not in params or params [ 'writedir' ] is None : params [ 'writedir' ] = settings . writedir + model_key + '_sim' if not os . path . exists ( params [ 'writedir' ] ) : os . makedirs ( params [ 'writedir' ] ) readwrit...
def safe_compile ( self , settings , sourcepath , destination ) : """Safe compile It won ' t raise compile error and instead return compile success state as a boolean with a message . It will create needed directory structure first if it contain some directories that does not allready exists . Args : se...
source_map_destination = None if settings . SOURCE_MAP : source_map_destination = self . change_extension ( destination , "map" ) try : content = sass . compile ( filename = sourcepath , output_style = settings . OUTPUT_STYLES , source_comments = settings . SOURCE_COMMENTS , include_paths = settings . LIBRARY_P...
def get_owned_games ( self , steamID , include_appinfo = 1 , include_played_free_games = 0 , appids_filter = None , format = None ) : """Request a list of games owned by a given steam id . steamID : The users id include _ appinfo : boolean . include _ played _ free _ games : boolean . appids _ filter : a js...
parameters = { 'steamid' : steamID , 'include_appinfo' : include_appinfo , 'include_played_free_games' : include_played_free_games } if format is not None : parameters [ 'format' ] = format if appids_filter is not None : parameters [ 'appids_filter' ] = appids_filter url = self . create_request_url ( self . int...
def find_one ( self , filter = None , fields = None , skip = 0 , sort = None ) : """Similar to find . This method will only retrieve one row . If no row matches , returns None"""
result = self . find ( filter = filter , fields = fields , skip = skip , limit = 1 , sort = sort ) if len ( result ) > 0 : return result [ 0 ] else : return None
def configure_replace ( self , ns , definition ) : """Register a replace endpoint . The definition ' s func should be a replace function , which must : - accept kwargs for the request and path data - return the replaced item : param ns : the namespace : param definition : the endpoint definition"""
@ self . add_route ( ns . instance_path , Operation . Replace , ns ) @ request ( definition . request_schema ) @ response ( definition . response_schema ) @ wraps ( definition . func ) def replace ( ** path_data ) : headers = dict ( ) request_data = load_request_data ( definition . request_schema ) # Replac...
def get_statistics ( self , id_or_uri , port_name = '' ) : """Gets the statistics from an interconnect . Args : id _ or _ uri : Can be either the interconnect id or the interconnect uri . port _ name ( str ) : A specific port name of an interconnect . Returns : dict : The statistics for the interconnect t...
uri = self . _client . build_uri ( id_or_uri ) + "/statistics" if port_name : uri = uri + "/" + port_name return self . _client . get ( uri )
def require_valid_type ( value , * classes ) : """Checks that the specified object reference is instance of classes and throws a : py : class : ` TypeError ` if it is not . : param value : The object . : type value : object : param classes : The classes . : type classes : list ( class )"""
if value is not None : valid = False for auxiliar_class in classes : if isinstance ( value , auxiliar_class ) : valid = True break if not valid : raise TypeError ( )
def _start_frontend ( self , restart = False ) : """Check if it is enabled and start the frontend http & websocket"""
self . log ( self . config , self . config . frontendenabled , lvl = verbose ) if self . config . frontendenabled and not self . frontendrunning or restart : self . log ( "Restarting webfrontend services on" , self . frontendtarget ) self . static = Static ( "/" , docroot = self . frontendtarget ) . register ( ...
def general_setting ( key , default = None , expected_type = None , qsettings = None ) : """Helper function to get a value from settings . : param key : Unique key for setting . : type key : basestring : param default : The default value in case of the key is not found or there is an error . : type defaul...
if qsettings is None : qsettings = QSettings ( ) try : if isinstance ( expected_type , type ) : return qsettings . value ( key , default , type = expected_type ) else : return qsettings . value ( key , default ) except TypeError as e : LOGGER . debug ( 'exception %s' % e ) LOGGER . d...
def replace_cr_with_newline ( message : str ) : """TQDM and requests use carriage returns to get the training line to update for each batch without adding more lines to the terminal output . Displaying those in a file won ' t work correctly , so we ' ll just make sure that each batch shows up on its one line . ...
if '\r' in message : message = message . replace ( '\r' , '' ) if not message or message [ - 1 ] != '\n' : message += '\n' return message
def npm ( usr_pwd = None , clean = False ) : """Handle npm for Node . js"""
# see if node is installed try : cmd ( 'which npm' ) except : return print ( '-[npm]----------' ) # awk , ignore 1st line and grab 1st word p = cmd ( "npm outdated -g | awk 'NR>1 {print $1}'" ) if not p : return pkgs = getPackages ( p ) for p in pkgs : cmd ( '{} {}' . format ( 'npm update -g ' , p ) , u...
def simulate ( self , timepoints ) : """Simulate initialised solver for the specified timepoints : param timepoints : timepoints that will be returned from simulation : return : a list of trajectories for each of the equations in the problem ."""
solver = self . _solver last_timepoint = timepoints [ - 1 ] try : simulated_timepoints , simulated_values = solver . simulate ( last_timepoint , ncp_list = timepoints ) except ( Exception , self . _solver_exception_class ) as e : # The exceptions thrown by solvers are usually hiding the real cause , try to see if i...
def ObjectRemovedEventHandler ( analysis , event ) : """Actions to be done when an analysis is removed from an Analysis Request"""
# If all the remaining analyses have been submitted ( or verified ) , try to # promote the transition to the Analysis Request # Note there is no need to check if the Analysis Request allows a given # transition , cause this is already managed by doActionFor analysis_request = analysis . getRequest ( ) wf . doActionFor ...
def creation_date ( path_to_file , return_datetime = True ) : """Retrieve a file ' s creation date . Try to get the date that a file was created , falling back to when it was last modified if that isn ' t possible . See http : / / stackoverflow . com / a / 39501288/1709587 for explanation . : param path _ t...
if platform . system ( ) == 'Windows' : created_at = os . path . getctime ( path_to_file ) else : stat = os . stat ( path_to_file ) try : created_at = stat . st_birthtime except AttributeError : # We ' re probably on Linux . No easy way to get creation dates here , # so we ' ll settle for wh...
def get_data_byte_array ( self , buffer = False ) : """Return a list of data for all blocks in this chunk ."""
if buffer : length = len ( self . dataList ) return BytesIO ( pack ( ">i" , length ) + self . get_data_byte_array ( ) ) else : return array . array ( 'B' , self . dataList ) . tostring ( )
def import_settings ( quiet = True ) : """This method takes care of importing settings from the environment , and config . py file . Order of operations : 1 . Imports all WILL _ settings from the environment , and strips off the WILL _ 2 . Imports settings from config . py 3 . Sets defaults for any missing ...
settings = { } # Import from environment , handle environment - specific parsing . for k , v in os . environ . items ( ) : if k [ : 5 ] == "WILL_" : k = k [ 5 : ] settings [ k ] = v if "HIPCHAT_ROOMS" in settings and type ( settings [ "HIPCHAT_ROOMS" ] ) is type ( "tes" ) : settings [ "HIPCHAT_R...
def user_has_access ( self , user ) : """Check if a user has access to view information for the account Args : user ( : obj : ` User ` ) : User object to check Returns : True if user has access to the account , else false"""
if ROLE_ADMIN in user . roles : return True # Non - admin users should only see active accounts if self . enabled : if not self . required_roles : return True for role in self . required_roles : if role in user . roles : return True return False
def _clean_data ( data ) : '''Removes SaltStack params from * * kwargs'''
for key in list ( data ) : if key . startswith ( '__pub' ) : del data [ key ] return data
def start ( self , timeout = None ) : """Start managed ioloop thread , or do nothing if not managed . If a timeout is passed , it will block until the the event loop is alive ( or the timeout expires ) even if the ioloop is not managed ."""
if not self . _ioloop : raise RuntimeError ( 'Call get_ioloop() or set_ioloop() first' ) self . _ioloop . add_callback ( self . _running . set ) if self . _ioloop_managed : self . _run_managed_ioloop ( ) else : # TODO this seems inconsistent with what the docstring describes self . _running . set ( ) if tim...
def _get_http_args ( self , params ) : """Return a copy of the http _ args Adds auth headers and ' source _ id ' , merges in params ."""
# Add the auth headers to any other headers headers = self . http_args . get ( 'headers' , { } ) if self . auth is not None : auth_headers = self . auth . get_headers ( ) headers . update ( auth_headers ) # build new http args with these headers http_args = self . http_args . copy ( ) if self . _source_id is no...
def equality ( self , indexes = None , value = None ) : """Math helper method . Given a column and optional indexes will return a list of booleans on the equality of the value for that index in the DataFrame to the value parameter . : param indexes : list of index values or list of booleans . If a list of boole...
indexes = [ True ] * len ( self . _index ) if indexes is None else indexes compare_list = self . get_rows ( indexes , as_list = True ) return [ x == value for x in compare_list ]
def followingPrefix ( prefix ) : """Returns a String that sorts just after all Strings beginning with a prefix"""
prefixBytes = array ( 'B' , prefix ) changeIndex = len ( prefixBytes ) - 1 while ( changeIndex >= 0 and prefixBytes [ changeIndex ] == 0xff ) : changeIndex = changeIndex - 1 ; if ( changeIndex < 0 ) : return None newBytes = array ( 'B' , prefix [ 0 : changeIndex + 1 ] ) newBytes [ changeIndex ] = newBytes [ cha...
def drop_namespaces ( self ) : """Drop all namespaces ."""
self . session . query ( NamespaceEntry ) . delete ( ) self . session . query ( Namespace ) . delete ( ) self . session . commit ( )
def iter_detector_clss ( ) : """Iterate over all of the detectors that are included in this sub - package . This is a convenience method for capturing all new Detectors that are added over time and it is used both by the unit tests and in the ` ` Scrubber . _ _ init _ _ ` ` method ."""
return iter_subclasses ( os . path . dirname ( os . path . abspath ( __file__ ) ) , Detector , _is_abstract_detector , )
def _reconnect ( self ) : """Closes the existing database connection and re - opens it ."""
self . close ( ) self . _db = psycopg2 . connect ( ** self . _db_args ) if self . _search_path : self . execute ( 'set search_path=%s;' % self . _search_path ) if self . _timezone : self . execute ( "set timezone='%s';" % self . _timezone )
def update_campaign_stop ( self , campaign_id , ** kwargs ) : # noqa : E501 """Stop a campaign . # noqa : E501 This command will begin the process of stopping a campaign . # noqa : E501 This method makes a synchronous HTTP request by default . To make an asynchronous HTTP request , please pass asynchronous = ...
kwargs [ '_return_http_data_only' ] = True if kwargs . get ( 'asynchronous' ) : return self . update_campaign_stop_with_http_info ( campaign_id , ** kwargs ) # noqa : E501 else : ( data ) = self . update_campaign_stop_with_http_info ( campaign_id , ** kwargs ) # noqa : E501 return data
def get_params_for_handler ( self , class_scope , pyfunc ) : """: type pyfunc : rope . base . pyobjectsdef . PyFunction"""
try : cls , signal = self . handlers [ class_scope ] [ pyfunc . get_name ( ) ] except KeyError : return { } attrs = { } idx = 0 names = pyfunc . get_param_names ( False ) if pyfunc . get_kind ( ) in ( 'method' , 'classmethod' ) : names = names [ 1 : ] idx += 1 if names : attrs [ idx ] = self . get_t...
def spread ( nodes , n ) : """Distrubute master instances in different nodes "192.168.0.1 " : [ node1 , node2 ] , "192.168.0.2 " : [ node3 , node4 ] , "192.168.0.3 " : [ node5 , node6] } = > [ node1 , node3 , node5]"""
target = [ ] while len ( target ) < n and nodes : for ip , node_group in list ( nodes . items ( ) ) : if not node_group : nodes . pop ( ip ) continue target . append ( node_group . pop ( 0 ) ) if len ( target ) >= n : break return target
def get_objects ( self , flush = False , autosnap = True , ** kwargs ) : '''Main API method for sub - classed cubes to override for the generation of the objects which are to ( potentially ) be added to the cube ( assuming no duplicates )'''
logger . debug ( 'Running get_objects(flush=%s, autosnap=%s, %s)' % ( flush , autosnap , kwargs ) ) if flush : s = time ( ) result = self . flush ( autosnap = autosnap , ** kwargs ) diff = time ( ) - s logger . debug ( "Flush complete (%ss)" % int ( diff ) ) return result else : return self
def _sigma_ee_rel ( self , gam , eps ) : """Eq . A1 , A4 of Baring et al . ( 1999) Use for Ee > 2 MeV"""
A = 1 - 8 / 3 * ( gam - 1 ) ** 0.2 / ( gam + 1 ) * ( eps / gam ) ** ( 1.0 / 3.0 ) return ( self . _sigma_1 ( gam , eps ) + self . _sigma_2 ( gam , eps ) ) * A
def exists ( self , batch_id = None ) : """Returns True if batch _ id exists in the history ."""
try : self . model . objects . get ( batch_id = batch_id ) except self . model . DoesNotExist : return False return True
def check_y ( y , link , dist , min_samples = 1 , verbose = True ) : """tool to ensure that the targets : - are in the domain of the link function - are numerical - have at least min _ samples - is finite Parameters y : array - like link : Link object dist : Distribution object min _ samples : int...
y = np . ravel ( y ) y = check_array ( y , force_2d = False , min_samples = min_samples , ndim = 1 , name = 'y data' , verbose = verbose ) with warnings . catch_warnings ( ) : warnings . simplefilter ( "ignore" ) if np . any ( np . isnan ( link . link ( y , dist ) ) ) : raise ValueError ( 'y data is not...
def get ( ctx , key ) : '''Retrieve the value for the given key .'''
file = ctx . obj [ 'FILE' ] stored_value = get_key ( file , key ) if stored_value : click . echo ( '%s=%s' % ( key , stored_value ) ) else : exit ( 1 )
def save ( self , inplace = True ) : """Saves modification to the api server ."""
data = self . _modified_data ( ) data = data [ 'permissions' ] if bool ( data ) : url = six . text_type ( self . href ) + self . _URL [ 'permissions' ] extra = { 'resource' : self . __class__ . __name__ , 'query' : data } logger . info ( 'Modifying permissions' , extra = extra ) self . _api . patch ( ur...
def copy_attr ( self , other ) : """Copies all other attributes ( not methods ) from the other object to this instance ."""
if not isinstance ( other , Symbol ) : return # Nothing done if not a Symbol object tmp = re . compile ( '__.*__' ) for attr in ( x for x in dir ( other ) if not tmp . match ( x ) ) : if ( hasattr ( self . __class__ , attr ) and str ( type ( getattr ( self . __class__ , attr ) ) in ( 'property' , 'function' , '...
def fgm ( x , logits , y = None , eps = 0.3 , ord = np . inf , clip_min = None , clip_max = None , targeted = False , sanity_checks = True ) : """TensorFlow implementation of the Fast Gradient Method . : param x : the input placeholder : param logits : output of model . get _ logits : param y : ( optional ) A...
asserts = [ ] # If a data range was specified , check that the input was in that range if clip_min is not None : asserts . append ( utils_tf . assert_greater_equal ( x , tf . cast ( clip_min , x . dtype ) ) ) if clip_max is not None : asserts . append ( utils_tf . assert_less_equal ( x , tf . cast ( clip_max , ...
def get_filtered_keys ( self , suffix , * args , ** kwargs ) : """Returns the index keys to be used by the collection for the given args For the parameters , see BaseIndex . get _ filtered _ keys"""
args = self . prepare_args ( args , transform = False ) for index in self . _indexes : if index . can_handle_suffix ( suffix ) : return index . get_filtered_keys ( suffix , * args , ** kwargs )
def nframes ( self ) : """Gets the number of frames in the source file ."""
length = ctypes . c_long ( ) size = ctypes . c_int ( ctypes . sizeof ( length ) ) check ( _coreaudio . ExtAudioFileGetProperty ( self . _obj , PROP_LENGTH , ctypes . byref ( size ) , ctypes . byref ( length ) ) ) return length . value
def set_filter_type ( self , filter_type = None ) : """Set ( modify ) filtering mode for better compression ` filter _ type ` is number or name of filter type for better compression see http : / / www . w3 . org / TR / PNG / # 9Filter - types for details It ' s also possible to use adaptive strategy for choos...
if filter_type is None : filter_type = 0 elif isinstance ( filter_type , basestring ) : str_ftype = str ( filter_type ) . lower ( ) filter_names = { 'none' : 0 , 'sub' : 1 , 'up' : 2 , 'average' : 3 , 'paeth' : 4 } if str_ftype in filter_names : filter_type = filter_names [ str_ftype ] self . fi...
def parse_datetime ( dt , ignoretz = True , ** kwargs ) : """: param dt : string datetime to convert into datetime object . : return : datetime object if the string can be parsed into a datetime . Otherwise , return None . : see : http : / / labix . org / python - dateutil Examples : > > > parse _ datetim...
try : return parse ( dt , ignoretz = ignoretz , ** kwargs ) except : return None
def get_credentials ( env = None ) : """Gets the TextMagic credentials from current environment : param env : environment : return : username , token"""
environ = env or os . environ try : username = environ [ "TEXTMAGIC_USERNAME" ] token = environ [ "TEXTMAGIC_AUTH_TOKEN" ] return username , token except KeyError : return None , None
def do_loop_turn ( self ) : """Receiver daemon main loop : return : None"""
# Begin to clean modules self . check_and_del_zombie_modules ( ) # Maybe the arbiter pushed a new configuration . . . if self . watch_for_new_conf ( timeout = 0.05 ) : logger . info ( "I got a new configuration..." ) # Manage the new configuration self . setup_new_conf ( ) # Maybe external modules raised ' ...
def _set_modes ( self , v , load = False ) : """Setter method for modes , mapped from YANG variable / rbridge _ id / ag / pg / modes ( pg - policy - types ) If this variable is read - only ( config : false ) in the source YANG file , then _ set _ modes is considered as a private method . Backends looking to p...
if hasattr ( v , "_utype" ) : v = v . _utype ( v ) try : t = YANGDynClass ( v , base = TypedListType ( allowed_type = RestrictedClassType ( base_type = unicode , restriction_dict = { 'length' : [ u'1..10' ] } ) ) , is_leaf = False , yang_name = "modes" , rest_name = "modes" , parent = self , path_helper = self ...
def api_version ( self ) : """Get Pagure API version . : return :"""
request_url = "{}/api/0/version" . format ( self . instance ) return_value = self . _call_api ( request_url ) return return_value [ 'version' ]
def channel_to_id ( slack , channel ) : """Surely there ' s a better way to do this . . ."""
channels = slack . api_call ( 'channels.list' ) . get ( 'channels' ) or [ ] groups = slack . api_call ( 'groups.list' ) . get ( 'groups' ) or [ ] if not channels and not groups : raise RuntimeError ( "Couldn't get channels and groups." ) ids = [ c [ 'id' ] for c in channels + groups if c [ 'name' ] == channel ] if ...
def format ( self , record : logging . LogRecord ) -> str : """Formats a record and serializes it as a JSON str . If record message isnt already a dict , initializes a new dict and uses ` default _ msg _ fieldname ` as a key as the record msg as the value ."""
msg : Union [ str , dict ] = record . msg if not isinstance ( record . msg , dict ) : msg = { self . default_msg_fieldname : msg } if record . exc_info : # type : ignore msg [ "exc_info" ] = record . exc_info if record . exc_text : # type : ignore msg [ "exc_text" ] = record . exc_text # type : ignore retur...
def eye ( N , M = 0 , k = 0 , dtype = None , ** kwargs ) : """Returns a new symbol of 2 - D shpae , filled with ones on the diagonal and zeros elsewhere . Parameters N : int Number of rows in the output . M : int , optional Number of columns in the output . If 0 , defaults to N . k : int , optional In...
if dtype is None : dtype = _numpy . float32 return _internal . _eye ( N , M , k , dtype = dtype , ** kwargs )
def create_metadata ( * args , ** kwargs ) : # pylint : disable = unused - argument """Generate the metadata to send the napp package ."""
json_filename = kwargs . get ( 'json_filename' , 'kytos.json' ) readme_filename = kwargs . get ( 'readme_filename' , 'README.rst' ) ignore_json = kwargs . get ( 'ignore_json' , False ) metadata = { } if not ignore_json : try : with open ( json_filename ) as json_file : metadata = json . load ( j...