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def _with_columns ( self , columns ) : """Create a table from a sequence of columns , copying column labels ."""
table = type ( self ) ( ) for label , column in zip ( self . labels , columns ) : self . _add_column_and_format ( table , label , column ) return table
def cmd_alt ( self , args ) : '''show altitude'''
print ( "Altitude: %.1f" % self . status . altitude ) qnh_pressure = self . get_mav_param ( 'AFS_QNH_PRESSURE' , None ) if qnh_pressure is not None and qnh_pressure > 0 : ground_temp = self . get_mav_param ( 'GND_TEMP' , 21 ) pressure = self . master . field ( 'SCALED_PRESSURE' , 'press_abs' , 0 ) qnh_alt ...
def add_space ( self , line ) : """Add a Space object to the section Used during initial parsing mainly Args : line ( str ) : one line that defines the space , maybe whitespaces"""
if not isinstance ( self . last_item , Space ) : space = Space ( self . _structure ) self . _structure . append ( space ) self . last_item . add_line ( line ) return self
def get_hdrs ( flds_all , ** kws ) : """Return headers , given user - specified key - word args ."""
# Return Headers if the user explicitly lists them . hdrs = kws . get ( 'hdrs' , None ) if hdrs is not None : return hdrs # User may specify a subset of fields or a column order using prt _ flds if 'prt_flds' in kws : return kws [ 'prt_flds' ] # All fields in the namedtuple will be in the headers return flds_al...
def substr ( self , name , start = None , size = None ) : """Return a substring of the string at key ` ` name ` ` . ` ` start ` ` and ` ` size ` ` are 0 - based integers specifying the portion of the string to return . Like * * Redis . SUBSTR * * : param string name : the key name : param int start : Option...
if start is not None and size is not None : start = get_integer ( 'start' , start ) size = get_integer ( 'size' , size ) return self . execute_command ( 'substr' , name , start , size ) elif start is not None : start = get_integer ( 'start' , start ) return self . execute_command ( 'substr' , name ,...
def ad_address ( mode , hit_id ) : """Get the address of the ad on AWS . This is used at the end of the experiment to send participants back to AWS where they can complete and submit the HIT ."""
if mode == "debug" : address = '/complete' elif mode in [ "sandbox" , "live" ] : username = os . getenv ( 'psiturk_access_key_id' , config . get ( "psiTurk Access" , "psiturk_access_key_id" ) ) password = os . getenv ( 'psiturk_secret_access_id' , config . get ( "psiTurk Access" , "psiturk_secret_access_id"...
def force_bytes ( s , encoding = 'utf-8' , strings_only = False , errors = 'strict' ) : """Similar to smart _ bytes , except that lazy instances are resolved to strings , rather than kept as lazy objects . If strings _ only is True , don ' t convert ( some ) non - string - like objects ."""
if isinstance ( s , memoryview ) : s = bytes ( s ) if isinstance ( s , bytes ) : if encoding == 'utf-8' : return s else : return s . decode ( 'utf-8' , errors ) . encode ( encoding , errors ) if strings_only and ( s is None or isinstance ( s , int ) ) : return s if not isinstance ( s , s...
def from_robot ( cls , robot , ** kwargs ) : """Construct a Nearest Neighbor forward model from an existing dataset ."""
m = cls ( len ( robot . m_feats ) , len ( robot . s_feats ) , ** kwargs ) return m
def features ( self ) : """list : Get the features stored in memory or in the GFF file"""
if self . feature_file : log . debug ( '{}: reading features from feature file {}' . format ( self . id , self . feature_path ) ) with open ( self . feature_path ) as handle : feats = list ( GFF . parse ( handle ) ) if len ( feats ) > 1 : log . warning ( 'Too many sequences in GFF' )...
def pfull_from_ps ( bk , pk , ps , pfull_coord ) : """Compute pressure at full levels from surface pressure ."""
return to_pfull_from_phalf ( phalf_from_ps ( bk , pk , ps ) , pfull_coord )
def attached_pane ( self ) : """Return the attached : class : ` Pane ` . Returns : class : ` Pane `"""
for pane in self . _panes : if 'pane_active' in pane : # for now pane _ active is a unicode if pane . get ( 'pane_active' ) == '1' : return Pane ( window = self , ** pane ) else : continue return [ ]
def _unquote_cookie ( s : str ) -> str : """Handle double quotes and escaping in cookie values . This method is copied verbatim from the Python 3.5 standard library ( http . cookies . _ unquote ) so we don ' t have to depend on non - public interfaces ."""
# If there aren ' t any doublequotes , # then there can ' t be any special characters . See RFC 2109. if s is None or len ( s ) < 2 : return s if s [ 0 ] != '"' or s [ - 1 ] != '"' : return s # We have to assume that we must decode this string . # Down to work . # Remove the " s s = s [ 1 : - 1 ] # Check for sp...
def template_exists_db ( self , template ) : """Receives a template and checks if it exists in the database using the template name and language"""
name = utils . camel_to_snake ( template [ 0 ] ) . upper ( ) language = utils . camel_to_snake ( template [ 3 ] ) try : models . EmailTemplate . objects . get ( name = name , language = language ) except models . EmailTemplate . DoesNotExist : return False return True
def run_command ( self , config_file ) : """: param str config _ file : The name of config file ."""
config = configparser . ConfigParser ( ) config . read ( config_file ) rdbms = config . get ( 'database' , 'rdbms' ) . lower ( ) label_regex = config . get ( 'constants' , 'label_regex' ) constants = self . create_constants ( rdbms ) constants . main ( config_file , label_regex )
def _Backward3_T_Ps ( P , s ) : """Backward equation for region 3 , T = f ( P , s ) Parameters P : float Pressure , [ MPa ] s : float Specific entropy , [ kJ / kgK ] Returns T : float Temperature , [ K ]"""
sc = 4.41202148223476 if s <= sc : T = _Backward3a_T_Ps ( P , s ) else : T = _Backward3b_T_Ps ( P , s ) return T
def parse ( cls , fptr , offset , length ) : """Parse XML box . Parameters fptr : file Open file object . offset : int Start position of box in bytes . length : int Length of the box in bytes . Returns XMLBox Instance of the current XML box ."""
num_bytes = offset + length - fptr . tell ( ) read_buffer = fptr . read ( num_bytes ) if sys . hexversion < 0x03000000 and codecs . BOM_UTF8 in read_buffer : # Python3 with utf - 8 handles this just fine . Actually so does # Python2 right here since we decode using utf - 8 . The real # problem comes when _ _ str _ _ is...
def _is_non_string_iterable ( value ) : """Whether a value is iterable ."""
if isinstance ( value , str ) : return False if hasattr ( value , '__iter__' ) : return True if isinstance ( value , collections . abc . Sequence ) : return True return False
def mean ( self ) -> Optional [ float ] : """Statistical mean of all values entered into histogram . This number is precise , because we keep the necessary data separate from bin contents ."""
if self . _stats : # TODO : should be true always ? if self . total > 0 : return self . _stats [ "sum" ] / self . total else : return np . nan else : return None
def strip_prompt ( self , a_string ) : """Strip ' Done ' from command output"""
output = super ( NetscalerSSH , self ) . strip_prompt ( a_string ) lines = output . split ( self . RESPONSE_RETURN ) if "Done" in lines [ - 1 ] : return self . RESPONSE_RETURN . join ( lines [ : - 1 ] ) else : return output
def parse_inline_styles ( self , data = None , import_type = 'string' ) : """Function for parsing styles defined in the body of the document . This only includes data inside of HTML < style > tags , a URL , or file to open ."""
if data is None : raise parser = cssutils . CSSParser ( ) if import_type == 'string' : # print " importing string with url = % s " % self . url _ root sheet = parser . parseString ( data , href = self . url_root ) elif import_type == 'url' : if data [ : 5 ] . lower ( ) == 'http:' or data [ : 6 ] . lower ( )...
def pixel ( self , coord_x , coord_y ) : # type : ( int , int ) - > Pixel """Returns the pixel value at a given position . : param int coord _ x : The x coordinate . : param int coord _ y : The y coordinate . : return tuple : The pixel value as ( R , G , B ) ."""
try : return self . pixels [ coord_y ] [ coord_x ] # type : ignore except IndexError : raise ScreenShotError ( "Pixel location ({}, {}) is out of range." . format ( coord_x , coord_y ) )
def overlap ( self , query , subject ) : """Accessory function to check if two ranges overlap"""
if ( self . pt_within ( query [ 0 ] , subject ) or self . pt_within ( query [ 1 ] , subject ) or self . pt_within ( subject [ 0 ] , query ) or self . pt_within ( subject [ 1 ] , query ) ) : return True return False
def merge ( self , other , forceMerge = False ) : """Merge two reads by concatenating their sequence data and their quality data ( < self > first , then < other > ) ; < self > and < other > must have the same sequence name . A new merged FastqSequence object is returned ; < Self > and < other > are left unalt...
if self . sequenceName != other . sequenceName and not forceMerge : raise NGSReadError ( "cannot merge " + self . sequenceName + " with " + other . sequenceName + " -- different " + "sequence names" ) name = self . sequenceName seq = self . sequenceData + other . sequenceData qual = self . sequenceQual + other . se...
def mask_distance ( image , voxelspacing = None , mask = slice ( None ) ) : r"""Computes the distance of each point under the mask to the mask border taking the voxel - spacing into account . Note that this feature is independent of the actual image content , but depends solely the mask image . Therefore alwa...
if type ( image ) == tuple or type ( image ) == list : image = image [ 0 ] return _extract_mask_distance ( image , mask = mask , voxelspacing = voxelspacing )
def insert ( self , schema , fields , ** kwargs ) : """Persist d into the db schema - - Schema ( ) fields - - dict - - the values to persist return - - int - - the primary key of the row just inserted"""
r = 0 with self . connection ( ** kwargs ) as connection : kwargs [ 'connection' ] = connection try : with self . transaction ( ** kwargs ) : r = self . _insert ( schema , fields , ** kwargs ) except Exception as e : exc_info = sys . exc_info ( ) if self . handle_error ( ...
def set_trafo_costs ( network , args , cost110_220 = 7500 , cost110_380 = 17333 , cost220_380 = 14166 ) : """Set capital costs for extendable transformers in respect to PyPSA [ € / MVA ] Parameters network : : class : ` pypsa . Network Overall container of PyPSA cost110_220 : capital costs for 110/220kV t...
network . transformers [ "v_nom0" ] = network . transformers . bus0 . map ( network . buses . v_nom ) network . transformers [ "v_nom1" ] = network . transformers . bus1 . map ( network . buses . v_nom ) network . transformers . loc [ ( network . transformers . v_nom0 == 110 ) & ( network . transformers . v_nom1 == 220...
def listFileParentsByLumi ( self , block_name = '' , logical_file_name = [ ] ) : """required parameter : block _ name returns : [ { child _ parent _ id _ list : [ ( cid1 , pid1 ) , ( cid2 , pid2 ) , . . . ( cidn , pidn ) ] } ]"""
# self . logger . debug ( " lfn % s , block _ name % s " % ( logical _ file _ name , block _ name ) ) if not block_name : dbsExceptionHandler ( 'dbsException-invalid-input' , "Child block_name is required for fileparents/listFileParentsByLumi api" , self . logger . exception ) with self . dbi . connection ( ) as co...
def set ( self , data = None ) : """Sets the event"""
self . __data = data self . __exception = None self . __event . set ( )
def add_edge ( self , source , target , interaction = '-' , directed = True , dataframe = True ) : """Add a single edge from source to target ."""
new_edge = { 'source' : source , 'target' : target , 'interaction' : interaction , 'directed' : directed } return self . add_edges ( [ new_edge ] , dataframe = dataframe )
async def process_feed ( self , url , send_mentions = True ) : """process a feed"""
self . _feed_domains . add ( utils . get_domain ( url ) ) if url in self . _processed_feeds : LOGGER . debug ( "Skipping already processed feed %s" , url ) return self . _processed_feeds . add ( url ) LOGGER . debug ( "++WAIT: %s: get feed" , url ) feed , previous , updated = await feeds . get_feed ( self , url...
def stdev ( self ) : """- > # float : func : numpy . std of the timing intervals"""
return round ( np . std ( self . array ) , self . precision ) if len ( self . array ) else None
def get ( self , section_name , key_name , ) : """Replicate configparser . get ( ) functionality Args : section _ name ( str ) : section name in config key _ name ( str ) : key name in config . section _ name Returns : str : do not check defaults , only return local value Raises : KeyError : unable to...
value = None try : value = self . local_config . get ( section_name , key_name ) except Exception as error_msg : self . logger . warning ( '%s.%s not found in local config' , section_name , key_name ) try : value = self . global_config . get ( section_name , key_name ) except Exception as error_...
def verify ( password , encoded ) : """Verify a Password : param password : : param encoded : : return : True or False"""
algorithm , iterations , salt , h = split ( encoded ) to_verify = encode ( password , algorithm , salt , int ( iterations ) ) return hmac . compare_digest ( to_verify . encode ( ) , encoded . encode ( ) )
def validate_attr ( self , append ) : """validate that we have the same order as the existing & same dtype"""
if append : existing_fields = getattr ( self . attrs , self . kind_attr , None ) if ( existing_fields is not None and existing_fields != list ( self . values ) ) : raise ValueError ( "appended items do not match existing items" " in table!" ) existing_dtype = getattr ( self . attrs , self . dtype_at...
def chrome_setup_view ( request ) : """Set up a browser - side GCM session . This * requires * a valid login session . A " token " POST parameter is saved under the " gcm _ token " parameter in the logged in user ' s NotificationConfig ."""
logger . debug ( request . POST ) token = None if request . method == "POST" : if "token" in request . POST : token = request . POST . get ( "token" ) if not token : return HttpResponse ( '{"error":"Invalid data."}' , content_type = "text/json" ) ncfg , _ = NotificationConfig . objects . get_or_create (...
def step1 ( expnum , ccd , prefix = '' , version = 'p' , sex_thresh = _SEX_THRESHOLD , wave_thresh = _WAVE_THRESHOLD , maxcount = _MAX_COUNT , dry_run = False ) : """run the actual step1jmp / matt codes . expnum : the CFHT expousre to process ccd : which ccd in the mosaic to process fwhm : the image quality ,...
storage . get_file ( expnum , ccd , prefix = prefix , version = version , ext = 'mopheader' ) filename = storage . get_image ( expnum , ccd , version = version , prefix = prefix ) fwhm = storage . get_fwhm ( expnum , ccd , prefix = prefix , version = version ) basename = os . path . splitext ( filename ) [ 0 ] logging ...
def get_corresponding_lineno ( self , lineno ) : """Return the source line number of a line number in the generated bytecode as they are not in sync ."""
for template_line , code_line in reversed ( self . debug_info ) : if code_line <= lineno : return template_line return 1
def get_all_tasks ( self , course ) : """: return : a table containing taskid = > Task pairs"""
tasks = self . get_readable_tasks ( course ) output = { } for task in tasks : try : output [ task ] = self . get_task ( course , task ) except : pass return output
def _prefix_from_prefix_string ( cls , prefixlen_str ) : """Return prefix length from a numeric string Args : prefixlen _ str : The string to be converted Returns : An integer , the prefix length . Raises : NetmaskValueError : If the input is not a valid netmask"""
# int allows a leading + / - as well as surrounding whitespace , # so we ensure that isn ' t the case if not _BaseV4 . _DECIMAL_DIGITS . issuperset ( prefixlen_str ) : cls . _report_invalid_netmask ( prefixlen_str ) try : prefixlen = int ( prefixlen_str ) except ValueError : cls . _report_invalid_netmask ( ...
def _watch ( self ) : """Start an asynchronous watch against this model . See : meth : ` add _ observer ` to register an onchange callback ."""
async def _all_watcher ( ) : try : allwatcher = client . AllWatcherFacade . from_connection ( self . connection ( ) ) while not self . _watch_stopping . is_set ( ) : try : results = await utils . run_with_interrupt ( allwatcher . Next ( ) , self . _watch_stopping , loop =...
def replace ( needle , with_ = None , in_ = None ) : """Replace occurrences of string ( s ) with other string ( s ) in ( a ) string ( s ) . Unlike the built in : meth : ` str . replace ` method , this function provides clean API that clearly distinguishes the " needle " ( string to replace ) , the replacement...
if needle is None : raise TypeError ( "replacement needle cannot be None" ) if not needle : raise ValueError ( "replacement needle cannot be empty" ) if is_string ( needle ) : replacer = Replacer ( ( needle , ) ) else : ensure_iterable ( needle ) if not is_mapping ( needle ) : if all ( imap ...
def do_connect ( self , arg ) : '''Connect to the arm .'''
if self . arm . is_connected ( ) : print ( self . style . error ( 'Error: ' , 'Arm is already connected.' ) ) else : try : port = self . arm . connect ( ) print ( self . style . success ( 'Success: ' , 'Connected to \'{}\'.' . format ( port ) ) ) except r12 . ArmException as e : prin...
def _extract_readnum ( read_dict ) : """Extract read numbers from old - style fastqs . Handles read 1 and 2 specifications where naming is readname / 1 readname / 2"""
pat = re . compile ( r"(?P<readnum>/\d+)$" ) parts = pat . split ( read_dict [ "name" ] ) if len ( parts ) == 3 : name , readnum , endofline = parts read_dict [ "name" ] = name read_dict [ "readnum" ] = readnum else : read_dict [ "readnum" ] = "" return read_dict
def set_device_offset ( self , x_offset , y_offset ) : """Sets an offset that is added to the device coordinates determined by the CTM when drawing to surface . One use case for this method is when we want to create a : class : ` Surface ` that redirects drawing for a portion of an onscreen surface to an ...
cairo . cairo_surface_set_device_offset ( self . _pointer , x_offset , y_offset ) self . _check_status ( )
def close_authenticator ( self ) : """Close the CBS auth channel and session ."""
_logger . info ( "Shutting down CBS session on connection: %r." , self . _connection . container_id ) try : _logger . debug ( "Unlocked CBS to close on connection: %r." , self . _connection . container_id ) self . _cbs_auth . destroy ( ) _logger . info ( "Auth closed, destroying session on connection: %r." ...
def setup_datafind_from_pregenerated_lcf_files ( cp , ifos , outputDir , tags = None ) : """This function is used if you want to run with pregenerated lcf frame cache files . Parameters cp : ConfigParser . ConfigParser instance This contains a representation of the information stored within the workflow c...
if tags is None : tags = [ ] datafindcaches = [ ] for ifo in ifos : search_string = "datafind-pregenerated-cache-file-%s" % ( ifo . lower ( ) , ) frame_cache_file_name = cp . get_opt_tags ( "workflow-datafind" , search_string , tags = tags ) curr_cache = lal . Cache . fromfilenames ( [ frame_cache_file_...
def transformWith ( self , func , other , keepSerializer = False ) : """Return a new DStream in which each RDD is generated by applying a function on each RDD of this DStream and ' other ' DStream . ` func ` can have two arguments of ( ` rdd _ a ` , ` rdd _ b ` ) or have three arguments of ( ` time ` , ` rdd ...
if func . __code__ . co_argcount == 2 : oldfunc = func func = lambda t , a , b : oldfunc ( a , b ) assert func . __code__ . co_argcount == 3 , "func should take two or three arguments" jfunc = TransformFunction ( self . _sc , func , self . _jrdd_deserializer , other . _jrdd_deserializer ) dstream = self . _sc ....
def overall_statistics ( RACC , RACCU , TPR , PPV , TP , FN , FP , POP , P , TOP , jaccard_list , CEN_dict , MCEN_dict , AUC_dict , classes , table ) : """Return overall statistics . : param RACC : random accuracy : type RACC : dict : param TPR : sensitivity , recall , hit rate , or true positive rate : typ...
population = list ( POP . values ( ) ) [ 0 ] overall_accuracy = overall_accuracy_calc ( TP , population ) overall_random_accuracy_unbiased = overall_random_accuracy_calc ( RACCU ) overall_random_accuracy = overall_random_accuracy_calc ( RACC ) overall_kappa = reliability_calc ( overall_random_accuracy , overall_accurac...
def arguments ( function , extra_arguments = 0 ) : """Returns the name of all arguments a function takes"""
if not hasattr ( function , '__code__' ) : return ( ) return function . __code__ . co_varnames [ : function . __code__ . co_argcount + extra_arguments ]
def rm_pawn ( self , name , * args ) : """Remove the : class : ` Pawn ` by the given name ."""
if name not in self . pawn : raise KeyError ( "No Pawn named {}" . format ( name ) ) # Currently there ' s no way to connect Pawns with Arrows but I # think there will be , so , insurance self . rm_arrows_to_and_from ( name ) pwn = self . pawn . pop ( name ) if pwn in self . selection_candidates : self . select...
def get_parse ( self , show = True , proxy = None , timeout = 0 ) : """GET MediaWiki : API action = parse request https : / / en . wikipedia . org / w / api . php ? action = help & modules = parse Required { params } : title OR pageid - title : < str > article title - pageid : < int > Wikipedia database ID ...
if not self . params . get ( 'title' ) and not self . params . get ( 'pageid' ) : raise ValueError ( "get_parse needs title or pageid" ) self . _get ( 'parse' , show , proxy , timeout ) return self
def create ( self , argv ) : """Create a search job ."""
opts = cmdline ( argv , FLAGS_CREATE ) if len ( opts . args ) != 1 : error ( "Command requires a search expression" , 2 ) query = opts . args [ 0 ] job = self . service . jobs . create ( opts . args [ 0 ] , ** opts . kwargs ) print ( job . sid )
def build ( self ) : """The decoder computational graph consists of three components : (1 ) the input node ` decoder _ input ` (2 ) the embedding node ` decoder _ embed ` (3 ) the recurrent ( RNN ) part ` decoder _ rnn ` (4 ) the output of the decoder RNN ` decoder _ output ` (5 ) the classification outpu...
# Grab hyperparameters from self . config : hidden_dim = self . config [ 'encoding-layer-width' ] recurrent_unit = self . config [ 'recurrent-unit-type' ] bidirectional = False # self . config [ ' encoding - layer - bidirectional ' ] vocab_size = self . data . properties . vocab_size embedding_dim = math . ceil ( math ...
def wrap ( self , req , result ) : """Wrap method return results . The return value of the action method and of the action extensions is passed through this method before being returned to the caller . Instances of ` webob . Response ` are thrown , to abort the rest of action and extension processing ; othe...
if isinstance ( result , webob . exc . HTTPException ) : # It ' s a webob HTTP exception ; use raise to bail out # immediately and pass it upstream raise result elif isinstance ( result , webob . Response ) : # Straight - up webob Response object ; we raise # AppathyResponse to bail out raise exceptions . Appat...
def app_main ( self , experiment = None , last = False , new = False , verbose = False , verbosity_level = None , no_modification = False , match = False ) : """The main function for parsing global arguments Parameters experiment : str The id of the experiment to use last : bool If True , the last experim...
if match : patt = re . compile ( experiment ) matches = list ( filter ( patt . search , self . config . experiments ) ) if len ( matches ) > 1 : raise ValueError ( "Found multiple matches for %s: %s" % ( experiment , matches ) ) elif len ( matches ) == 0 : raise ValueError ( "No experime...
def setattr ( self , name , val ) : """Change the attribute value of the UI element . Not all attributes can be casted to text . If changing the immutable attributes or attributes which do not exist , the InvalidOperationException exception is raised . Args : name : attribute name val : new attribute value ...
nodes = self . _do_query ( multiple = False ) try : return self . poco . agent . hierarchy . setAttr ( nodes , name , val ) except UnableToSetAttributeException as e : raise InvalidOperationException ( '"{}" of "{}"' . format ( str ( e ) , self ) )
def _set_redistribute_ospf ( self , v , load = False ) : """Setter method for redistribute _ ospf , mapped from YANG variable / rbridge _ id / ipv6 / router / ospf / redistribute / redistribute _ ospf ( container ) If this variable is read - only ( config : false ) in the source YANG file , then _ set _ redistr...
if hasattr ( v , "_utype" ) : v = v . _utype ( v ) try : t = YANGDynClass ( v , base = redistribute_ospf . redistribute_ospf , is_container = 'container' , presence = True , yang_name = "redistribute-ospf" , rest_name = "ospf" , parent = self , path_helper = self . _path_helper , extmethods = self . _extmethods...
def push_pos ( self , * args ) : """Set my current position , expressed as proportions of the board ' s width and height , into the ` ` _ x ` ` and ` ` _ y ` ` keys of the entity in my ` ` proxy ` ` property , such that it will be recorded in the database ."""
self . proxy [ '_x' ] = self . x / self . board . width self . proxy [ '_y' ] = self . y / self . board . height
def AssertIterableType ( iterable , expected_item_type ) : """Ensures that given iterable container has certain type . Args : iterable : An iterable container to assert the type for . expected _ item _ type : An expected type of the container items . Raises : TypeError : If given container does is not an ...
# We do not consider iterators to be iterables even though Python does . An # " iterable " should be a type that can be iterated ( that is : an iterator can # be constructed for them ) . Iterators should not be considered to be iterable # because it makes no sense to construct an iterator for iterator . The most # impo...
def __f2d ( frac_coords , v ) : """Converts fractional coordinates to discrete coordinates with respect to the grid size of v"""
# frac _ coords = frac _ coords % 1 return np . array ( [ int ( frac_coords [ 0 ] * v . shape [ 0 ] ) , int ( frac_coords [ 1 ] * v . shape [ 1 ] ) , int ( frac_coords [ 2 ] * v . shape [ 2 ] ) ] )
def register_view ( self , view ) : """Called when the View was registered Can be used e . g . to connect signals . Here , the destroy signal is connected to close the application"""
super ( StateEditorController , self ) . register_view ( view ) view . prepare_the_labels ( ) # the preparation of the labels is done here to take into account plugin hook changes view [ 'add_input_port_button' ] . connect ( 'clicked' , self . inputs_ctrl . on_add ) view [ 'add_output_port_button' ] . connect ( 'clicke...
def sinkhorn_lpl1_mm ( a , labels_a , b , M , reg , eta = 0.1 , numItermax = 10 , numInnerItermax = 200 , stopInnerThr = 1e-9 , verbose = False , log = False , to_numpy = True ) : """Solve the entropic regularization optimal transport problem with nonconvex group lasso regularization on GPU If the input matrix ...
a , labels_a , b , M = utils . to_gpu ( a , labels_a , b , M ) p = 0.5 epsilon = 1e-3 indices_labels = [ ] labels_a2 = cp . asnumpy ( labels_a ) classes = npp . unique ( labels_a2 ) for c in classes : idxc , = utils . to_gpu ( npp . where ( labels_a2 == c ) ) indices_labels . append ( idxc ) W = np . zeros ( M ...
def clip ( self , lower = 0 , upper = 127 ) : """Clip the pianorolls of all tracks by the given lower and upper bounds . Parameters lower : int or float The lower bound to clip the pianorolls . Defaults to 0. upper : int or float The upper bound to clip the pianorolls . Defaults to 127."""
for track in self . tracks : track . clip ( lower , upper )
def _get_service_info ( service ) : '''return details about given connman service'''
service_info = pyconnman . ConnService ( os . path . join ( SERVICE_PATH , service ) ) data = { 'label' : service , 'wireless' : service_info . get_property ( 'Type' ) == 'wifi' , 'connectionid' : six . text_type ( service_info . get_property ( 'Ethernet' ) [ 'Interface' ] ) , 'hwaddr' : six . text_type ( service_info ...
def on_change_checkout ( self ) : '''When you change checkin _ date or checkout _ date it will checked it and update the qty of hotel folio line @ param self : object pointer'''
configured_addition_hours = 0 fwhouse_id = self . folio_id . warehouse_id fwc_id = fwhouse_id or fwhouse_id . company_id if fwc_id : configured_addition_hours = fwhouse_id . company_id . additional_hours myduration = 0 if not self . checkin_date : self . checkin_date = time . strftime ( DEFAULT_SERVER_DATETIME_...
def _gssa ( self , initial_conditions , t_max ) : """This function is inspired from Yoav Ram ' s code available at : http : / / nbviewer . ipython . org / github / yoavram / ipython - notebooks / blob / master / GSSA . ipynb : param initial _ conditions : the initial conditions of the system : param t _ max :...
# set the initial conditions and t0 = 0. species_over_time = [ np . array ( initial_conditions ) . astype ( "int16" ) ] t = 0 time_points = [ t ] while t < t_max and species_over_time [ - 1 ] . sum ( ) > 0 : last = species_over_time [ - 1 ] e , dt = self . _draw ( last ) t += dt species_over_time . appe...
def write_pdb ( self , path ) : """Outputs a PDB file with the current contents of the system"""
if self . master is None and self . positions is None : raise ValueError ( 'Topology and positions are needed to write output files.' ) with open ( path , 'w' ) as f : PDBFile . writeFile ( self . topology , self . positions , f )
def __create_image ( self , inpt , hashfun ) : """Creates the avatar based on the input and the chosen hash function ."""
if hashfun not in generator . HASHES . keys ( ) : print ( "Unknown or unsupported hash function. Using default: %s" % self . DEFAULT_HASHFUN ) algo = self . DEFAULT_HASHFUN else : algo = hashfun return generator . generate ( inpt , algo )
def _get_os ( self ) : '''Get operating system summary'''
return { 'name' : self . _grain ( 'os' ) , 'family' : self . _grain ( 'os_family' ) , 'arch' : self . _grain ( 'osarch' ) , 'release' : self . _grain ( 'osrelease' ) , }
def cake ( return_X_y = True ) : """cake dataset Parameters return _ X _ y : bool , if True , returns a model - ready tuple of data ( X , y ) otherwise , returns a Pandas DataFrame Returns model - ready tuple of data ( X , y ) OR Pandas DataFrame Notes X contains the category of recipe used tran...
# y is real # recommend LinearGAM cake = pd . read_csv ( PATH + '/cake.csv' , index_col = 0 ) if return_X_y : X = cake [ [ 'recipe' , 'replicate' , 'temperature' ] ] . values X [ : , 0 ] = np . unique ( cake . values [ : , 1 ] , return_inverse = True ) [ 1 ] X [ : , 1 ] -= 1 y = cake [ 'angle' ] . value...
def transact ( self , transaction = None ) : """Customize calling smart contract transaction functions to use ` personal _ sendTransaction ` instead of ` eth _ sendTransaction ` and to estimate gas limit . This function is largely copied from web3 ContractFunction with important addition . Note : will fallbac...
if transaction is None : transact_transaction = { } else : transact_transaction = dict ( ** transaction ) if 'data' in transact_transaction : raise ValueError ( "Cannot set data in transact transaction" ) cf = self . _contract_function if cf . address is not None : transact_transaction . setdefault ( 't...
def file2abspath ( filename , this_file = __file__ ) : """generate absolute path for the given file and base dir"""
return os . path . abspath ( os . path . join ( os . path . dirname ( os . path . abspath ( this_file ) ) , filename ) )
def _fast_dataset ( variables : 'OrderedDict[Any, Variable]' , coord_variables : Mapping [ Any , Variable ] , ) -> 'Dataset' : """Create a dataset as quickly as possible . Beware : the ` variables ` OrderedDict is modified INPLACE ."""
from . dataset import Dataset variables . update ( coord_variables ) coord_names = set ( coord_variables ) return Dataset . _from_vars_and_coord_names ( variables , coord_names )
def from_signed_raw ( cls : Type [ PeerType ] , raw : str ) -> PeerType : """Return a Peer instance from a signed raw format string : param raw : Signed raw format string : return :"""
lines = raw . splitlines ( True ) n = 0 version = int ( Peer . parse_field ( "Version" , lines [ n ] ) ) n += 1 Peer . parse_field ( "Type" , lines [ n ] ) n += 1 currency = Peer . parse_field ( "Currency" , lines [ n ] ) n += 1 pubkey = Peer . parse_field ( "Pubkey" , lines [ n ] ) n += 1 block_uid = BlockUID . from_s...
def _var_bounds ( self ) : """Returns bounds on the optimisation variables ."""
x0 = array ( [ ] ) xmin = array ( [ ] ) xmax = array ( [ ] ) for var in self . om . vars : x0 = r_ [ x0 , var . v0 ] xmin = r_ [ xmin , var . vl ] xmax = r_ [ xmax , var . vu ] return x0 , xmin , xmax
def increment_extension_daily_stat ( self , publisher_name , extension_name , version , stat_type ) : """IncrementExtensionDailyStat . [ Preview API ] Increments a daily statistic associated with the extension : param str publisher _ name : Name of the publisher : param str extension _ name : Name of the exte...
route_values = { } if publisher_name is not None : route_values [ 'publisherName' ] = self . _serialize . url ( 'publisher_name' , publisher_name , 'str' ) if extension_name is not None : route_values [ 'extensionName' ] = self . _serialize . url ( 'extension_name' , extension_name , 'str' ) if version is not N...
def filter_curriculum ( curriculum , week , weekday = None ) : """筛选出指定星期 [ 和指定星期几 ] 的课程 : param curriculum : 课程表数据 : param week : 需要筛选的周数 , 是一个代表周数的正整数 : param weekday : 星期几 , 是一个代表星期的整数 , 1-7 对应周一到周日 : return : 如果 weekday 参数没给出 , 返回的格式与原课表一致 , 但只包括了在指定周数的课程 , 否则返回指定周数和星期几的当天课程"""
if weekday : c = [ deepcopy ( curriculum [ weekday - 1 ] ) ] else : c = deepcopy ( curriculum ) for d in c : l = len ( d ) for t_idx in range ( l ) : t = d [ t_idx ] if t is None : continue # 一般同一时间课程不会重复 , 重复时给出警告 t = list ( filter ( lambda k : week in k [ '上...
def get_local_client ( c_path = os . path . join ( syspaths . CONFIG_DIR , 'master' ) , mopts = None , skip_perm_errors = False , io_loop = None , auto_reconnect = False ) : '''. . versionadded : : 2014.7.0 Read in the config and return the correct LocalClient object based on the configured transport : param ...
if mopts : opts = mopts else : # Late import to prevent circular import import salt . config opts = salt . config . client_config ( c_path ) # TODO : AIO core is separate from transport return LocalClient ( mopts = opts , skip_perm_errors = skip_perm_errors , io_loop = io_loop , auto_reconnect = auto_reconn...
def call ( napalm_device , method , * args , ** kwargs ) : '''Calls arbitrary methods from the network driver instance . Please check the readthedocs _ page for the updated list of getters . . . _ readthedocs : http : / / napalm . readthedocs . org / en / latest / support / index . html # getters - support - ma...
result = False out = None opts = napalm_device . get ( '__opts__' , { } ) retry = kwargs . pop ( '__retry' , True ) # retry executing the task ? force_reconnect = kwargs . get ( 'force_reconnect' , False ) if force_reconnect : log . debug ( 'Forced reconnection initiated' ) log . debug ( 'The current opts (unde...
def discover ( timeout = 5 ) : """Convenience method to discover UPnP devices on the network . Returns a list of ` upnp . Device ` instances . Any invalid servers are silently ignored ."""
devices = { } for entry in scan ( timeout ) : if entry . location in devices : continue try : devices [ entry . location ] = Device ( entry . location ) except Exception as exc : log = _getLogger ( "ssdp" ) log . error ( 'Error \'%s\' for %s' , exc , entry . location ) return...
def loop_until_closed ( self , suppress_warning = False ) : '''Execute a blocking loop that runs and executes event callbacks until the connection is closed ( e . g . by hitting Ctrl - C ) . While this method can be used to run Bokeh application code " outside " the Bokeh server , this practice is HIGHLY DISC...
suppress_warning # shut up flake from bokeh . util . deprecation import deprecated deprecated ( "ClientSession.loop_until_closed is deprecated, and will be removed in an eventual 2.0 release. " "Run Bokeh applications directly on a Bokeh server instead. See:\n\n" " https//docs.bokeh.org/en/latest/docs/user_guide/ser...
def search ( self , song_title , limit = 1 ) : """根据歌曲名搜索歌曲 : params : song _ title : 歌曲名 limit : 搜索数量"""
url = "http://music.163.com/api/search/pc" headers = { 'Cookie' : 'appver=1.5.2' , 'Referer' : 'http://music.163.com' } payload = { 's' : song_title , 'limit' : limit , 'type' : 1 } r = requests . post ( url , params = payload , headers = headers ) data = json . loads ( r . text ) if data [ 'code' ] == 200 : return...
def create ( self , type , friendly_name = values . unset , certificate = values . unset , private_key = values . unset , sandbox = values . unset , api_key = values . unset , secret = values . unset ) : """Create a new CredentialInstance : param CredentialInstance . PushService type : The Credential type : par...
data = values . of ( { 'Type' : type , 'FriendlyName' : friendly_name , 'Certificate' : certificate , 'PrivateKey' : private_key , 'Sandbox' : sandbox , 'ApiKey' : api_key , 'Secret' : secret , } ) payload = self . _version . create ( 'POST' , self . _uri , data = data , ) return CredentialInstance ( self . _version , ...
def get_extents ( self , element , ranges , range_type = 'combined' ) : """Make adjustments to plot extents by computing stacked bar heights , adjusting the bar baseline and forcing the x - axis to be categorical ."""
if self . batched : overlay = self . current_frame element = Bars ( overlay . table ( ) , kdims = element . kdims + overlay . kdims , vdims = element . vdims ) for kd in overlay . kdims : ranges [ kd . name ] [ 'combined' ] = overlay . range ( kd ) extents = super ( BarPlot , self ) . get_extents ( ...
def log_response ( handler ) : """Acturally , logging response is not a server ' s responsibility , you should use http tools like Chrome Developer Tools to analyse the response . Although this function and its setting ( LOG _ RESPONSE ) is not recommended to use , if you are laze as I was and working in deve...
content_type = handler . _headers . get ( 'Content-Type' , None ) headers_str = handler . _generate_headers ( ) block = 'Response Infomations:\n' + headers_str . strip ( ) if content_type and ( 'text' in content_type or 'json' in content_type ) : limit = 0 if 'LOG_RESPONSE_LINE_LIMIT' in settings : limi...
def _getError ( self , device , message ) : """Get the error message or value stored in the Qik hardware . : Parameters : device : ` int ` The device is the integer number of the hardware devices ID and is only used with the Pololu Protocol . message : ` bool ` If set to ` True ` a text message will be ...
cmd = self . _COMMAND . get ( 'get-error' ) self . _writeData ( cmd , device ) result = [ ] bits = [ ] try : num = self . _serial . read ( size = 1 ) num = ord ( num ) except serial . SerialException as e : self . _log and self . _log . error ( "Error: %s" , e , exc_info = True ) raise e except TypeErro...
def generate ( self , text ) : """Generate and save avatars , return a list of file name : [ filename _ s , filename _ m , filename _ l ] . : param text : The text used to generate image ."""
sizes = current_app . config [ 'AVATARS_SIZE_TUPLE' ] path = current_app . config [ 'AVATARS_SAVE_PATH' ] suffix = { sizes [ 0 ] : 's' , sizes [ 1 ] : 'm' , sizes [ 2 ] : 'l' } for size in sizes : image_byte_array = self . get_image ( string = str ( text ) , width = int ( size ) , height = int ( size ) , pad = int ...
def is_valid ( hal_id ) : """Check that a given HAL id is a valid one . : param hal _ id : The HAL id to be checked . : returns : Boolean indicating whether the HAL id is valid or not . > > > is _ valid ( " hal - 01258754 , version 1 " ) True > > > is _ valid ( " hal - 01258754 " ) True > > > is _ val...
match = REGEX . match ( hal_id ) return ( match is not None ) and ( match . group ( 0 ) == hal_id )
def _GetChunkForReading ( self , chunk ) : """Returns the relevant chunk from the datastore and reads ahead ."""
try : return self . chunk_cache . Get ( chunk ) except KeyError : pass # We don ' t have this chunk already cached . The most common read # access pattern is contiguous reading so since we have to go to # the data store already , we read ahead to reduce round trips . missing_chunks = [ ] for chunk_number in ran...
def isBlockComment ( self , line , column ) : """Check if text at given position is a block comment . If language is not known , or text is not parsed yet , ` ` False ` ` is returned"""
return self . _highlighter is not None and self . _highlighter . isBlockComment ( self . document ( ) . findBlockByNumber ( line ) , column )
def to_pickle ( self , filepath ) : """Parameters filepath : str . Should end in . pkl . If it does not , " . pkl " will be appended to the passed string . Returns None . Saves the model object to the location specified by ` filepath ` ."""
if not isinstance ( filepath , str ) : raise ValueError ( "filepath must be a string." ) if not filepath . endswith ( ".pkl" ) : filepath = filepath + ".pkl" with open ( filepath , "wb" ) as f : pickle . dump ( self , f ) print ( "Model saved to {}" . format ( filepath ) ) return None
def hourly_dew_point ( self ) : """A data collection containing hourly dew points over they day ."""
dpt_data = self . _humidity_condition . hourly_dew_point_values ( self . _dry_bulb_condition ) return self . _get_daily_data_collections ( temperature . DewPointTemperature ( ) , 'C' , dpt_data )
def _encode_query ( query ) : """Quote all values of a query string ."""
if query == '' : return query query_args = [ ] for query_kv in query . split ( '&' ) : k , v = query_kv . split ( '=' ) query_args . append ( k + "=" + quote ( v . encode ( 'utf-8' ) ) ) return '&' . join ( query_args )
def update ( self ) : """Update this ` ~ photutils . isophote . EllipseSample ` instance with the intensity integrated at the ( x0 , y0 ) center position using bilinear integration . The local gradient is set to ` None ` ."""
s = self . extract ( ) self . mean = s [ 2 ] [ 0 ] self . gradient = None self . gradient_error = None self . gradient_relative_error = None
def restriction ( lam , mu , orbitals , U , beta ) : """Equation that determines the restriction on lagrange multipier"""
return 2 * orbitals * fermi_dist ( - ( mu + lam ) , beta ) - expected_filling ( - 1 * lam , orbitals , U , beta )
def sha256_digest ( instr ) : '''Generate a sha256 hash of a given string .'''
return salt . utils . stringutils . to_unicode ( hashlib . sha256 ( salt . utils . stringutils . to_bytes ( instr ) ) . hexdigest ( ) )
def mxmt ( m1 , m2 ) : """Multiply a 3x3 matrix and the transpose of another 3x3 matrix . http : / / naif . jpl . nasa . gov / pub / naif / toolkit _ docs / C / cspice / mxmt _ c . html : param m1 : 3x3 double precision matrix . : type m1 : 3x3 - Element Array of floats : param m2 : 3x3 double precision mat...
m1 = stypes . toDoubleMatrix ( m1 ) m2 = stypes . toDoubleMatrix ( m2 ) mout = stypes . emptyDoubleMatrix ( ) libspice . mxmt_c ( m1 , m2 , mout ) return stypes . cMatrixToNumpy ( mout )
def find_file ( search_dir , file_pattern ) : """Search for a file in a directory , and return the first match . If the file is not found return an empty string Args : search _ dir : The root directory to search in file _ pattern : A unix - style wildcard pattern representing the file to find Returns : ...
for root , dirnames , fnames in os . walk ( search_dir ) : for fname in fnames : if fnmatch . fnmatch ( fname , file_pattern ) : return os . path . join ( root , fname ) return ""
def attachment_show ( self , id , ** kwargs ) : "https : / / developer . zendesk . com / rest _ api / docs / core / attachments # show - attachment"
api_path = "/api/v2/attachments/{id}.json" api_path = api_path . format ( id = id ) return self . call ( api_path , ** kwargs )
def run ( self ) : """Starts the blotter Connects to the TWS / GW , processes and logs market data , and broadcast it over TCP via ZeroMQ ( which algo subscribe to )"""
self . _check_unique_blotter ( ) # connect to mysql self . mysql_connect ( ) self . context = zmq . Context ( zmq . REP ) self . socket = self . context . socket ( zmq . PUB ) self . socket . bind ( "tcp://*:" + str ( self . args [ 'zmqport' ] ) ) db_modified = 0 contracts = [ ] prev_contracts = [ ] first_run = True se...