page_content stringlengths 0 46.9k | metadata dict |
|---|---|
### Bug description
With Quarto 1.2.108 on macOS 12.5.1 (Intel):
1. Clone this repo: https://github.com/seeM/test-jupyter-widgets
2. Run `quarto render`
You'll see the following warning here. I'm not sure if its related:
```
WARNING: Malformed Jupyter Output Display Data found:
WARNING: {... | {
"assignee": null,
"comments": 2,
"created_at": "2022-09-15T01:18:45Z",
"creator": "seeM",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2445,
"state": "closed",
"title": "Embedded `ipywidgets` are not rendered",
"url": "https://github.com/... |
Instead of generating bad output, we should issue an error.
The real bug is here: #2266 . The fix for it is quite tricky, so we should at least disallow this broken usage for the moment. | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2022-09-14T15:22:49Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": "v1.2",
"number": 2440,
"state": "closed",
"title": "`output-file` shouldn't take paths",
"url": "https://github.com/quarto-de... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2413
<div type='discussions-op-text'>
<sup>Originally posted by **jordan-melendez** September 12, 2022</sup>
In certain journals it is common to format references to equations like `Eq. (1.1)` with parentheses around the equation number. Quart... | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2022-09-14T12:45:28Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"enhancement",
"crossref"
],
"locked": false,
"milestone": "v1.4",
"number": 2439,
"state": "open",
"title": "Option for parentheses around equation num... |
### Bug description
From https://stackoverflow.com/questions/73684948/how-to-prevent-mermaid-flow-charts-overflowing-in-quarto
````markdown
---
title: "Workflow"
authors: "Satya P"
format: pdf
---
```{mermaid}
%%| fig-height: 9
flowchart TB
1(Available Data)
1 --> 2(aaaaaaaaa)
1 --> 3(bbbbbbbbb... | {
"assignee": "cscheid",
"comments": 5,
"created_at": "2022-09-14T12:11:47Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug",
"windows",
"mermaid"
],
"locked": false,
"milestone": "v1.4",
"number": 2438,
"state": "open",
"title": "mermaid diagram is cropped in PDF ou... |
### Bug description
Using a proposition environment with `:::{#prp}` I get the spanish translation `Propocición` that is not correct. The correct translation is `Proposición`.
Example.
```
---
lang: es
---
:::{#prp-my-proposition}
Proposición de ejemplo.
:::
```
quarto version 1.1.189 on Arch linux
... | {
"assignee": null,
"comments": 1,
"created_at": "2022-09-14T07:46:15Z",
"creator": "asalber",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 2436,
"state": "closed",
"title": "Wrong spanish translation of propositions",
"url": "https://github.... |
### Bug description
In the following repo:
https://github.com/jph00/test-loop-preview
...typing `quarto preview` and then `touch index.ipynb` in another terminal results in an infinite loop.
```
Executing 'index.ipynb'
Cell 1/2...Done
Cell 2/2...Done
pandoc
to: html
output-file: index.html
... | {
"assignee": "jjallaire",
"comments": 2,
"created_at": "2022-09-14T04:22:44Z",
"creator": "jph00",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2435,
"state": "closed",
"title": "Infinite loop in `quarto preview`",
"url": "https://github.c... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2433
<div type='discussions-op-text'>
<sup>Originally posted by **AmeliaMN** September 13, 2022</sup>
I posted this on the [RStudio community](https://community.rstudio.com/t/more-helpful-error-messages-when-quarto-options-are-mis-specified/14... | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2022-09-13T23:01:05Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"bug",
"yaml-validation"
],
"locked": false,
"milestone": "v1.2",
"number": 2434,
"state": "closed",
"title": "More helpful error messages when Quarto... |
### plotly tooltip misaligned in quarto with revealjs
Rendering the following example results in an html file where the tooltip is off-center. You would need to position the pointer above and to the left of the point you want to select in order to view the information for that data point. I tried opening it in Micro... | {
"assignee": null,
"comments": 5,
"created_at": "2022-09-13T20:58:56Z",
"creator": "lizwillow",
"is_pull_request": false,
"labels": [
"bug",
"needs-discussion"
],
"locked": false,
"milestone": "Future",
"number": 2430,
"state": "closed",
"title": "With revealjs, plotly tooltip not align... |
### Bug description
Hello,
Apparently images ref completion does not work when using listings (**VSCode 1.71.0, Windows 10 64 bit**). Here is the message :
```
[Error - 15:06:20] Request textDocument/completion failed.
Message: Request textDocument/completion failed with message: Command failed:
Programs\... | {
"assignee": "jjallaire",
"comments": 3,
"created_at": "2022-09-13T13:17:54Z",
"creator": "RomanLF",
"is_pull_request": false,
"labels": [
"bug",
"needs-repro",
"crossref"
],
"locked": false,
"milestone": "v1.2",
"number": 2421,
"state": "closed",
"title": "cross-ref on VScode: figu... |
### Bug description
## To Reproduce The Error
### Step 1: Clone the minimal example
```bash
git clone https://github.com/hamelsmu/tquarto.git && cd tquarto
```
### Step 2: Run quarto through a subprocess
(You should look at the contents of this file, it is just two lines of code)
```bash
python run... | {
"assignee": "cscheid",
"comments": 16,
"created_at": "2022-09-13T00:15:41Z",
"creator": "hamelsmu",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 2420,
"state": "closed",
"title": "Quarto Preview Fails when run from `subprocess.run` in python ... |
### Bug description
I'm facing quite a series of challenges installing extensions. My specific use case is to distribute an extension that is hosted on a private enterprise GitLab server. This introduces a few challenges that I haven't been able to work through.
For now, my solution is to clone the extension as a s... | {
"assignee": "dragonstyle",
"comments": 2,
"created_at": "2022-09-12T21:12:31Z",
"creator": "dgkf",
"is_pull_request": false,
"labels": [
"bug",
"extensions"
],
"locked": false,
"milestone": "v1.2",
"number": 2419,
"state": "closed",
"title": "Installing extension from archive of non-Gi... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2415
<div type='discussions-op-text'>
<sup>Originally posted by **shabbychef** September 12, 2022</sup>
It seems that the options
```
#| out-width: "0.5\\textwidth"
#| out-height: "0.32\\textwidth"
```
have no effect on .pdf output: the f... | {
"assignee": "dragonstyle",
"comments": 7,
"created_at": "2022-09-12T20:19:00Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2417,
"state": "closed",
"title": "`out-width` and `out-height` for latex figures can't be set ... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2411
<div type='discussions-op-text'>
<sup>Originally posted by **shabbychef** September 12, 2022</sup>
Hi,
I _think_ in quarto I can set default options in the header YAML via something like:
```
format:
html:
out-width: "625px"
... | {
"assignee": "cscheid",
"comments": 6,
"created_at": "2022-09-12T20:15:58Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "Future",
"number": 2416,
"state": "open",
"title": "chunk options conditional to output format ? ",
"url":... |
### Bug description
This was an issue we discovered on RStudio Cloud but would apply to any RStudio Workbench installation.
Once a user renders a quarto document, the background job that starts to support the preview will run until killed. This will prevent the user's workbench session from going idle.
This was ... | {
"assignee": "jjallaire",
"comments": 4,
"created_at": "2022-09-12T19:18:14Z",
"creator": "samperman",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 2414,
"state": "closed",
"title": "quarto background job runs too long in the background",
... |
### Bug description
Unnumbered headers, e.g., `# References {-}`, are translated to `\chapter*` by pandoc. The starred sectioning commands in LaTeX have the side-effect of not updating the marks used for the page heads, which can have unintended effects. See., e.g., jgm/pandoc#1632 and rstudio/bookdown#1382. Pandoc tr... | {
"assignee": "dragonstyle",
"comments": 1,
"created_at": "2022-09-12T17:22:18Z",
"creator": "tarleb",
"is_pull_request": false,
"labels": [
"bug",
"crossref"
],
"locked": false,
"milestone": "v1.2",
"number": 2412,
"state": "closed",
"title": "Unnumbered sections do not show up in page ... |
### Bug description
## Description
Using the sidebar auto generation feature, I get different results between Windows and Linux. I have two nested folder structures with `index.qmd` files along content files for each section. On Windows, the index pages are added to the sidebar as expected, while on Linux, they are... | {
"assignee": null,
"comments": 3,
"created_at": "2022-09-12T15:28:25Z",
"creator": "RalfG",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "Future",
"number": 2409,
"state": "open",
"title": "Website sidebar auto generation renders differently on Window... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2406
<div type='discussions-op-text'>
<sup>Originally posted by **ericvmai** September 12, 2022</sup>
I keep trying to render a quarto html and pdf but rstudio tells me: No TeX installation was detected.
But when I enter quarto install tool... | {
"assignee": null,
"comments": 22,
"created_at": "2022-09-12T14:35:01Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "v1.2",
"number": 2408,
"state": "closed",
"title": "No TeX installation detected when trying to render pdf",
"... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2387
<div type='discussions-op-text'>
<sup>Originally posted by **Cghlewis** September 9, 2022</sup>
Hi!
I am wondering if there is a way to highlight code output (not the code itself-just the output) in a Quarto Revealjs presentation? I use... | {
"assignee": "cderv",
"comments": 0,
"created_at": "2022-09-11T10:57:02Z",
"creator": "mcanouil",
"is_pull_request": false,
"labels": [
"enhancement",
"revealjs"
],
"locked": false,
"milestone": "v1.4",
"number": 2399,
"state": "open",
"title": "[Feature Request] Extend `code-lines-numb... |
### Bug description
I am trying to create a quarto book in RStudio. When I add date-format field in the YAML, the book cannot be rendered. When I remove the date-format field, I can render it successfully. A sample YAML specification (in` _quarto.yml` file of the project) is as follows:
```
project:
type: book
... | {
"assignee": "cscheid",
"comments": 5,
"created_at": "2022-09-11T05:53:09Z",
"creator": "bhattmaulik",
"is_pull_request": false,
"labels": [
"bug",
"yaml-validation"
],
"locked": false,
"milestone": null,
"number": 2398,
"state": "closed",
"title": "Quarto doesn't accept date-format in ... |
### Bug description
I'm not quite sure what is going on, but for fairly basic documents, I see the Bibliography items place twice:
I am using macOS 12.5.1 and Quarto 1.1... | {
"assignee": "dragonstyle",
"comments": 2,
"created_at": "2022-09-10T14:51:59Z",
"creator": "iandol",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2393,
"state": "closed",
"title": "Bibliography Items are Repeated Twice",
"url": "https://g... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2173
<div type='discussions-op-text'>
<sup>Originally posted by **nickjhathaway** August 28, 2022</sup>
When creating a Quarto website project with the code copy to the clipboard turned on I noticed that I couldn't actually get to the copy but... | {
"assignee": "dragonstyle",
"comments": 0,
"created_at": "2022-09-09T22:30:50Z",
"creator": "dragonstyle",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2388,
"state": "closed",
"title": "Quarto Website: Prevent margin-sidebar from blocking c... |
(via mark sellors, thank you!)
````
---
title: "Posit Connect Scheduled Jobs Runner Architecture"
Author: "Mark Sellors"
Date: 2022-09-09
format:
html:
mermaid-format: png
---
## Architecture
In this architecture, Connect is configured as a cluster. However, one or more instances of Connect are l... | {
"assignee": "cscheid",
"comments": 0,
"created_at": "2022-09-09T16:52:25Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"bug",
"mermaid"
],
"locked": false,
"milestone": "v1.2",
"number": 2383,
"state": "closed",
"title": "mermaid diagrams rendered as PNG in HTML format... |
### Bug description
I've tried both book and website projects (essentially the same, I know) on both my work and home systems. Both projects build successfully on local storage. Attempting to preview or render the projects on the SMB share fail with different error messages. Rendering individual files succeeds on the ... | {
"assignee": "dragonstyle",
"comments": 15,
"created_at": "2022-09-09T16:39:51Z",
"creator": "guslipkin",
"is_pull_request": false,
"labels": [
"bug",
"windows",
"file-systems"
],
"locked": false,
"milestone": "v1.4",
"number": 2380,
"state": "open",
"title": "Build and Render fail ... |
### Bug description
If I have a project setup like this:
Structure:
```bash
.
|____quarto_files
| |____example.qmd
|_____quarto.yml
```
With `_quarto.yml` having the following configuration:
```yaml
project:
title: GitHub Issue
execute-dir: file
render:
- "**/*.qmd"
format: gfm
```
And... | {
"assignee": "jjallaire",
"comments": 5,
"created_at": "2022-09-09T01:35:31Z",
"creator": "Victor-Botelho",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2376,
"state": "closed",
"title": "`project.execute-dir: file` isn't respected",
"url"... |
### Bug description
Rendering outputs to parent directories using the `output-file` metadata parameter is not intuitive. Suppose I have the following structure:
```bash
.
|____quarto_files
| |____example.qmd
|_____quarto.yml
```
and in the `example.qmd` header I've set `output-file: TUTORIAL`.
Desired... | {
"assignee": null,
"comments": 1,
"created_at": "2022-09-09T00:34:46Z",
"creator": "Victor-Botelho",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "Future",
"number": 2375,
"state": "open",
"title": "`output-file` parameter follows file location, not project (... |
Recently I knew that I needed to update `quarto-cli` on my windows machine because `RStudio` ran into error with something like `python -null` which prevented me from creating a new project. Then found out it was due to Quarto. After I updated the `quarto-cli` to the latest version, the error disappeared.
Since Qu... | {
"assignee": "dragonstyle",
"comments": 4,
"created_at": "2022-09-08T23:47:27Z",
"creator": "Fred-Wu",
"is_pull_request": false,
"labels": [
"bug",
"enhancement"
],
"locked": false,
"milestone": "v1.4",
"number": 2374,
"state": "open",
"title": "How can I know I need to update Quarto-Cl... |
### Bug description
In LaTeX, it's common to define display equations that are within one paragraph and do not create a new paragraph. For example, if I write
```latex
The conditional intensity function can be written as
$$\lambda(t) = \lim_{\Delta t \to 0} \mathbb{E}\left[\frac{N(t + \Delta t) - N(t)}{\Delta t}... | {
"assignee": "cscheid",
"comments": 5,
"created_at": "2022-09-08T23:29:04Z",
"creator": "capnrefsmmat",
"is_pull_request": false,
"labels": [
"bug",
"needs-repro"
],
"locked": false,
"milestone": "v1.2",
"number": 2373,
"state": "closed",
"title": "Display equations should not automatic... |
### Bug description
👋 thank you _so_ much for this project. I am so grateful to be using it.
Something that is very handy is to iterate through a variable and then dynamically create tabs based on values of that variable (here `sex`). There is some strange interaction with the {gt} package whereby I can only m... | {
"assignee": null,
"comments": 18,
"created_at": "2022-09-08T22:21:58Z",
"creator": "boshek",
"is_pull_request": false,
"labels": [
"documentation",
"tables"
],
"locked": false,
"milestone": "v1.3",
"number": 2370,
"state": "closed",
"title": "gt::as_raw_html, purrr::walk and quarto int... |
### Bug description
For `format: pdf`, the default is `number-sections: false`. This works fine for `scrartcl` document class but not for `scrbook`. When `number-sections: false`, this is being put in the tex header.
```
\setcounter{secnumdepth}{-\maxdimen}
```
But that just doesn't work for book classes because o... | {
"assignee": "dragonstyle",
"comments": 1,
"created_at": "2022-09-08T22:06:58Z",
"creator": "eeholmes",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2369,
"state": "closed",
"title": "`number-sections: false` not set correctly for `documentc... |
### Bug description
I have been having trouble when writing a `.qmd` file that I want to have a static table of contents at the beginning with all the levels.
I am including the following yaml options at the beginning of the focument.
```yaml
---
title: "My document"
format: html
editor: visual
params:
... | {
"assignee": "dragonstyle",
"comments": 3,
"created_at": "2022-09-08T20:09:34Z",
"creator": "juan-g-p",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2366,
"state": "closed",
"title": "Static table of contents not showing all the levels",
"... |
### Bug description
In VSCode (v1.71.0) I'm trying to convert a .qmd file to html which contains both `Julia` and `python` code blocks.
This generates an html file that executes only the language block which is encountered first, and the second block is not executed. Reversing the order changes the language that su... | {
"assignee": null,
"comments": 1,
"created_at": "2022-09-08T20:09:25Z",
"creator": "JMLuther",
"is_pull_request": false,
"labels": [
"bug",
"wontfix"
],
"locked": false,
"milestone": null,
"number": 2365,
"state": "closed",
"title": "qmd won't run mixed Julia and Python blocks (to html)... |
### Bug description
Using embed-resources to contain output in a single html doesn't work when rendering from rstudio (2022.07.1 Build 554), but does work when using render on the command line (ubuntu 20.04): `quarto render test.qmd --output test.html`
````md
---
title: "param test"
format:
html:
embed-r... | {
"assignee": null,
"comments": 17,
"created_at": "2022-09-08T17:42:35Z",
"creator": "mikerspencer",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 2364,
"state": "closed",
"title": "embed-resources works from command line, not from rstudio",
"... |
### Bug description
When rendering a qmd file from the command line the resources folder is named after the qmd file, rather than the html output. This makes it impossible to parameterise output file names.
|type|expected|actual|
|---|---|---|
|source|test.qmd|test.qmd|
|resources|test_1_files|test_files|
|ou... | {
"assignee": "cscheid",
"comments": 7,
"created_at": "2022-09-08T17:35:31Z",
"creator": "mikerspencer",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.5",
"number": 2363,
"state": "open",
"title": "Render to a new file name stores resources in directory wit... |
### Bug description
Trying to do a book layout with margin content always on the right-side:
Here is my `_quarto.yml` file:
```
project:
type: book
book:
title: "tempMWE"
chapters:
- index.qmd
bibliography: references.bib
format:
pdf:
keep-tex: true
documentclass: scrbook
... | {
"assignee": "dragonstyle",
"comments": 1,
"created_at": "2022-09-08T17:25:48Z",
"creator": "flyaflya",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2362,
"state": "closed",
"title": "Quarto not respecting twoside=semi for scrbook",
"url":... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2345
<div type='discussions-op-text'>
<sup>Originally posted by **rgaiacs** September 7, 2022</sup>
It's common for academic articles to have "supplementary material"/"supporting information" that publishers process as a different document. T... | {
"assignee": "cscheid",
"comments": 0,
"created_at": "2022-09-08T15:01:37Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"crossref"
],
"locked": false,
"milestone": "v1.4",
"number": 2356,
"state": "open",
"title": "FR: customization options for cross references in book proj... |
### Bug description
```
:::{.callout-note icon="false"}
## response
some text
{#fig-multiple-version-r}
:::
```
in html looks fine
... | {
"assignee": "dragonstyle",
"comments": 7,
"created_at": "2022-09-08T13:22:02Z",
"creator": "dpastoor",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2354,
"state": "closed",
"title": "crossref inside a callout causes latex failure (but works... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2344
<div type='discussions-op-text'>
<sup>Originally posted by **allisonhorst** September 8, 2022</sup>
Hi there! Thanks for everything you all do, Quarto is amazing!
I'm starting to work in some `{ojs}` cells in Quarto. When I use `#| ec... | {
"assignee": "cscheid",
"comments": 3,
"created_at": "2022-09-08T12:53:56Z",
"creator": "allenmanning",
"is_pull_request": false,
"labels": [
"upstream"
],
"locked": false,
"milestone": null,
"number": 2353,
"state": "closed",
"title": "`//| echo: fenced` option remains in rendered OJS code... |
Let's say I have this structure:
````
> tree
C:\USERS\CHRIS\APPDATA\LOCAL\TEMP\TEST-LIGHTBOX
└───lightbox
├───example_files
│ └───mediabag
├───images
└───_extensions
└───quarto-ext
└───lightbox
└───resources
├───css
... | {
"assignee": "dragonstyle",
"comments": 2,
"created_at": "2022-09-08T11:56:16Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug",
"extensions"
],
"locked": false,
"milestone": "v1.2",
"number": 2351,
"state": "closed",
"title": "Extension not found when parent folder is ... |
### Bug description
On my [quarto page](https://github.com/schochastics/quarto-schochastics), I have utterance activated on 2 docs. On these two pages I have the following in my yaml header which has worked at least until quarto 1.1.128
``` yaml
comments:
utterances:
repo: schochastics/quarto-schochastics... | {
"assignee": "cscheid",
"comments": 6,
"created_at": "2022-09-08T06:53:06Z",
"creator": "schochastics",
"is_pull_request": false,
"labels": [
"bug",
"yaml-validation"
],
"locked": false,
"milestone": null,
"number": 2349,
"state": "closed",
"title": "Bad error message on invalid YAML",
... |
### Bug description
This is on `nbdev` side and I meant to post it [there](https://github.com/fastai/nbdev/issues/1020), not here (late night brainfart). Feel free to close.
I edited `_quarto.yml` file to change a CSS theme:
```
format:
html:
page-layout: article
theme:
light: flatly
... | {
"assignee": null,
"comments": 0,
"created_at": "2022-09-08T06:34:44Z",
"creator": "liquidcarbon",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 2348,
"state": "closed",
"title": "Quarto config file is changed by nbdev_docs",
"url": "https://... |
### Bug description
## Issue:
Cell attachments are rendered by Quarto properly w/ Jupyter Lab but not Jupyter Classic
To reproduce this error:
1. Clone [this repo](https://github.com/hamelsmu/attachments_quarto), which is an minimal quarto project
2. Run quarto preview
3. Start **Jupyter Lab**, and in `nb.i... | {
"assignee": "jjallaire",
"comments": 1,
"created_at": "2022-09-08T06:06:22Z",
"creator": "hamelsmu",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2347,
"state": "closed",
"title": "Cell Attachments Are Duplicated In Jupyter Classic",
"url... |
### Bug description
Consider the minimal working example:
``````
---
title: "MWE"
format:
docx:
toc: false
number-sections: false
---
Some text
::: callout-tip
## Solution
```{r}
1 + 1
```
:::
``````
Render the document gives
```
processing file: callout.qmd
|.................... | {
"assignee": null,
"comments": 2,
"created_at": "2022-09-08T03:35:54Z",
"creator": "rgaiacs",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 2346,
"state": "closed",
"title": "Render document with R code block inside callout to DOCX fail",
"ur... |
### Bug description
For HTML pages in website projects, the vertical position of `.column-margin` containers changes when refreshing a page from below the margin content.
When the [Article Layout](https://quarto.org/docs/authoring/article-layout.html) page is initially accessed, the column margin divs are anchore... | {
"assignee": "dragonstyle",
"comments": 1,
"created_at": "2022-09-07T19:44:14Z",
"creator": "jasonratcliff",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2341,
"state": "closed",
"title": "Margin content vertical position changes with HTML p... |
### Bug description
I am writing a book and I found that the HTML version's citation hover is broken when I use `nature.csl`. Maybe it's for all superscript citation styles?
To reproduce:
- create book
```shell
quarto create-project hover-bug --type book
```
- add `csl: science.csl` to `_quarto.yml`
... | {
"assignee": "dragonstyle",
"comments": 1,
"created_at": "2022-09-07T19:32:43Z",
"creator": "kjohnsen",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2340,
"state": "closed",
"title": "Hover tooltip broken for some citation styles",
"url": ... |
It looks like we're not suppressing the HTML output from OJS in PDF formats. At the very least we should be emitting a better error message.
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2334
<div type='discussions-op-text'>
<sup>Originally posted by **Eline2020** September 7, 2022</su... | {
"assignee": "cscheid",
"comments": 0,
"created_at": "2022-09-07T16:29:30Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"bug",
"ojs-engine"
],
"locked": false,
"milestone": "v1.2",
"number": 2338,
"state": "closed",
"title": "Issue with ojs_define and rendering PDF",
... |
### Bug description
This is from https://github.com/quarto-dev/quarto-cli/discussions/2333#discussioncomment-3586142
A user was trying to use Quarto with R, but default install with apt installed **knitr** 1.28.
The error thrown by quarto is
````
Error: 'hooks_markdown' is not an exported object from 'namesp... | {
"assignee": "cderv",
"comments": 0,
"created_at": "2022-09-07T15:31:41Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": "v1.3",
"number": 2336,
"state": "closed",
"title": "Check and inform about R packages minimum version requirement",
"url": "https... |
### Bug description
OS: macOS BigSur
Following the build instructions:
- clone the repo
- run `./configure.sh`
results in
```
error: Expected ';', '}' or <eof> at file:///opt/quarto-cli/src/resources/editor/tools/yaml/tree-sitter-yaml.json:1:8
+ return_code=1
+ set -e
+ [[ 1 -ne 0 ]]
+ echo 'deno v... | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2022-09-07T13:32:12Z",
"creator": "wood-chris",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 2332,
"state": "closed",
"title": "Building from source fails on Mac",
"url": "https://github.... |
I looked into this from a question in https://community.rstudio.com/t/setting-up-rss-feed-for-a-category-in-quarto-blog/146489/2
It seems from https://github.com/quarto-dev/quarto-cli/discussions/772#discussioncomment-2667075 that it is already possible to create RSS feed by categories. Right @dragonstyle ?
If... | {
"assignee": "dragonstyle",
"comments": 1,
"created_at": "2022-09-07T09:34:12Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"documentation"
],
"locked": false,
"milestone": "v1.2",
"number": 2330,
"state": "closed",
"title": "Document RSS feed by categories",
"url": "https:... |
### Bug description
Hello!
The issues are ....
1. When rendering a document to markdown format and such document generates images, the directory with the images is not moved to the output directory with the output file
2. When rendering a document with the `--output-dir` argument, it is ignored. (output is... | {
"assignee": "jjallaire",
"comments": 5,
"created_at": "2022-09-07T06:53:51Z",
"creator": "jspaezp",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2329,
"state": "closed",
"title": "Render does not move companion files to output directory",
... |
### Bug description
I followed the instructions in the tutorial here: https://quarto.org/docs/get-started/hello/vscode.html
It said to execute this command:
```
python3 -m pip install jupyter matplotlib plotly_express
```
I executed it and I got the following error output:
```
Traceback (most recent call las... | {
"assignee": "cscheid",
"comments": 5,
"created_at": "2022-09-06T21:04:48Z",
"creator": "mudgen",
"is_pull_request": false,
"labels": [
"documentation",
"upstream"
],
"locked": false,
"milestone": "Future",
"number": 2327,
"state": "open",
"title": "Installing \"python3 -m pip install j... |
#### Hi everyone, recently I migrated my website using Quarto and I would like customise the width and height of Open Graph. 👇
<img src="https://user-images.githubusercontent.com/23284899/188705141-cc7b15a3-ec74-474e-9dee-1b9516c79e89.PNG" width="500px"/>
#### My quarto.yml is the following 👇
<img src="https:/... | {
"assignee": "dragonstyle",
"comments": 6,
"created_at": "2022-09-06T17:53:00Z",
"creator": "ambarja",
"is_pull_request": false,
"labels": [
"needs-repro"
],
"locked": false,
"milestone": "v1.2",
"number": 2325,
"state": "closed",
"title": "How to customise the width and height of Open Grap... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2319
<div type='discussions-op-text'>
<sup>Originally posted by **11rchitwood** September 6, 2022</sup>
Let's say I have a post whose first code chunk is:
```r
plot(cars)
```
How can I make this be the preview image for the post?</div... | {
"assignee": "cscheid",
"comments": 9,
"created_at": "2022-09-06T17:48:51Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "v1.4",
"number": 2324,
"state": "open",
"title": "Use plot as blog post image",
"url": "https://github.c... |
This is a good way to tame the path behavior of includes. | {
"assignee": "cscheid",
"comments": 0,
"created_at": "2022-09-06T16:02:21Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2320,
"state": "closed",
"title": "Includes should support absolute paths",
"url": "https://git... |
### Bug description
If I have an R figure section with
```
```{r fig-xyz}
#| fig.cap: "Local Moran's I at $\alpha=0.005$"
plot(1)
```
(the closing back-quotes won't render) it errors with: `ERROR: SyntaxError: Unexpected token a in JSON at position 22` (not pointing to file/line). I would like to actually use ... | {
"assignee": "cscheid",
"comments": 7,
"created_at": "2022-09-06T15:42:34Z",
"creator": "edzer",
"is_pull_request": false,
"labels": [
"enhancement",
"yaml-validation"
],
"locked": false,
"milestone": "v1.2",
"number": 2317,
"state": "closed",
"title": "single quote + math equation in f... |
### Bug description
I have been unable to render my document in versions 1.1.179 or 1.1.189. I am on Windows 10 using VS Code but I have replicated the issue in CLI with Powershell and CMD. I have seen the following error:
```powershell
└─$ quarto render .\test.qmd --to html
ERROR: NotFound: The system cannot fin... | {
"assignee": "cderv",
"comments": 11,
"created_at": "2022-09-06T15:36:50Z",
"creator": "white-c",
"is_pull_request": false,
"labels": [
"bug",
"needs-repro",
"windows",
"file-systems"
],
"locked": false,
"milestone": "v1.3",
"number": 2316,
"state": "closed",
"title": "NotFound ... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2312
<div type='discussions-op-text'>
<sup>Originally posted by **plessl** September 6, 2022</sup>
Hi Quarto community.
I recently discovered Quarto and I'm very impressed by this wonderful software.
I'm currently preparing a companion ... | {
"assignee": "cscheid",
"comments": 8,
"created_at": "2022-09-06T12:56:39Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 2314,
"state": "closed",
"title": "Include file contents in code block is not working",
"url": "h... |
### Bug description
I have simple Quarto document with one R and one Python chunk. I want to access R variables in the python chunk via reticulate (`reticulate::repl_python()`) which works fine when I work with the document in RStudio.
```
---
title: "Example"
format: html
engine: knitr
---
```
```{r}
#... | {
"assignee": null,
"comments": 7,
"created_at": "2022-09-06T12:54:42Z",
"creator": "schae211",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "Future",
"number": 2313,
"state": "open",
"title": "Using reticulate in VSCode when dynamically executing quar... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2308
<div type='discussions-op-text'>
<sup>Originally posted by **emmansh** September 5, 2022</sup>
I'm trying to set up a quarto website with some SQL code chunks. Trying to reproduce some DB code from [R4DS book](https://r4ds.hadley.nz/data... | {
"assignee": "cderv",
"comments": 14,
"created_at": "2022-09-06T09:11:45Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 2310,
"state": "closed",
"title": "`Error: No method for S4 class:duckdb_connection` when incorporatin... |
I am not sure if it's the right place to ask this question. Many issues are about bugs. But any comment is appreciated.
In quarto, the qmd file may contain bit of latex syntax witch can be treated later by pandoc itself or additional filters. The function of filter is introduced by [quarto online guide](https://quar... | {
"assignee": null,
"comments": 2,
"created_at": "2022-09-06T03:42:11Z",
"creator": "Serenade600",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": null,
"number": 2309,
"state": "closed",
"title": "Can quarto specify input format like --read= in pandoc?",
"url": "https://gi... |
## Edited
All images in <https://quarto.org/docs/authoring/figures.html#figure-basics> highlight center-aligne caption while the current design is to left-align captions as mentioned in the documentation.
Images should be updated to be consistent with the current design, thus exhibit caption left-aligned.
##... | {
"assignee": "cwickham",
"comments": 6,
"created_at": "2022-09-05T18:18:50Z",
"creator": "mcanouil",
"is_pull_request": false,
"labels": [
"documentation"
],
"locked": false,
"milestone": "v1.4",
"number": 2306,
"state": "open",
"title": "Update images in documentation to highlight left-ali... |
### Bug description
It could be useful to add one alias for all slides output in our the format detection utility function (https://quarto.org/docs/extensions/lua.html#format-detection) so that it is easy to target slides in a Lua filter only for slides.
Example: Removing Pause syntax
````lua
Para = function... | {
"assignee": "cderv",
"comments": 0,
"created_at": "2022-09-05T15:40:38Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "Future",
"number": 2305,
"state": "open",
"title": "Add an alias to target all slides format in `quarto.doc.is... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2300
<div type='discussions-op-text'>
<sup>Originally posted by **mlarocca-git** September 5, 2022</sup>
I have been a Rmarkdown user for a long time. Recently I switched all Rmarkdown projects to Quarto.
I have a minor problem and haven'... | {
"assignee": null,
"comments": 6,
"created_at": "2022-09-05T14:36:33Z",
"creator": "allenmanning",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 2302,
"state": "closed",
"title": "Pause within slides in revealjs",
"url": "https://github.com/q... |
### Bug description
Citations in captions provided inside R chunks are properly resolved for **figures** (which is amazing, many thanks), but not for gt **tables**.
Example:
````
---
format: html
references:
- id: author:2015
author:
- family: Author
given: Ann
edition: '2'
issued:
... | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2022-09-05T11:54:22Z",
"creator": "njbart",
"is_pull_request": false,
"labels": [
"bug",
"crossref"
],
"locked": false,
"milestone": "v1.4",
"number": 2297,
"state": "open",
"title": "Citations in gt table captions not resolved",
"... |
@jph00 reports:
I just tried it with the latest quarto, and in a directory with just a single ipynb and a minimal _quarto.yml I got this error:
```
$ RUST_BACKTRACE=full quarto render
assertion failed [block != nullptr]: BasicBlock requested for unrecognized address
(BuilderBase.h:550 block_for_offset)
thread... | {
"assignee": "jjallaire",
"comments": 7,
"created_at": "2022-09-05T10:46:29Z",
"creator": "jjallaire",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": "v1.2",
"number": 2296,
"state": "closed",
"title": "rust launcher: crash on retrieving exit code from deno",
"url": "http... |
### Bug description
````markdown
---
format: pdf
keep-md: true
keep-tex: true
---
```{r}
#| label: tbl-iris
#| tbl-cap: "Iris Data"
library(knitr)
kable(head(iris), format = "latex", table.envir = "table", position = "h!")
```
````
**knitr** will generate table in LaTeX, with a specific table option... | {
"assignee": "cderv",
"comments": 0,
"created_at": "2022-09-05T09:00:20Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 2295,
"state": "closed",
"title": "Table caption inserted in wrong place in LaTeX table",
"url": "htt... |
### Bug description
This report describes an issue with obtaining bibliographic data directly from Zotero, bypassing the need for exporting `.bib`, `.json`, or `.yaml` bibliographic data, by using the Zotero add-on [zotxt](https://github.com/egh/zotxt) and the associated pandoc filter [pandoc-zotxt.lua](https://gith... | {
"assignee": "cscheid",
"comments": 8,
"created_at": "2022-09-05T08:51:16Z",
"creator": "njbart",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 2294,
"state": "closed",
"title": "citeproc settings in YAML metadata block: Problems when using pan... |
### Bug description
A simple quarto file with the following lines:
````qmd
---
title: "test"
format: html
editor: visual
---
+------------------------------------+-----------------------------------------------------+
| 读，再读，反复读 | 经验丰富的研究者通常有一份不断完善的 “文献目录”。大约五十页到一百页左右。这份文献目录集里集中了他们所在专业的... | {
"assignee": "jjallaire",
"comments": 2,
"created_at": "2022-09-05T04:00:49Z",
"creator": "psychelzh",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2292,
"state": "closed",
"title": "Grid table with different row lengths are not properly ren... |
I was hunting an error in one of my extensions today and it took me a very long time to understand what was going wrong. The error message I was getting was `ERROR: Source and destination cannot be the same.`
This was caused by a missing format ressource I had listed under `format-resources`. Would it be possible to... | {
"assignee": null,
"comments": 1,
"created_at": "2022-09-04T19:57:15Z",
"creator": "Nenuial",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": null,
"number": 2291,
"state": "closed",
"title": "More informative error when format-resources isn't found",
... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2289
<div type='discussions-op-text'>
<sup>Originally posted by **andrewpbray** September 4, 2022</sup>
I have been setting `code-folding: true` for my html doc, but I find the "Code" text next to the toggle triangle to be somewhat distractin... | {
"assignee": "dragonstyle",
"comments": 0,
"created_at": "2022-09-04T16:42:18Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2290,
"state": "closed",
"title": "Leaving code-summary empty",
"url": "https://github.com/... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2282
<div type='discussions-op-text'>
<sup>Originally posted by **produnis** September 4, 2022</sup>
Hi there,
I am creating a book, and I added a "description" in the _quarto.yaml file.
Now, the HTML file contains a META Descritpion entry... | {
"assignee": "dragonstyle",
"comments": 0,
"created_at": "2022-09-04T14:50:00Z",
"creator": "dragonstyle",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": "v1.2",
"number": 2286,
"state": "closed",
"title": "Book description displayed on every page.",
"url": "https://githu... |
When the `lang` is specified under a format, like:
```
format:
html:
lang: zh
```
We don't respect that lang when rendering a book (it must instead be at the root level).
See #251 | {
"assignee": "dragonstyle",
"comments": 3,
"created_at": "2022-09-04T13:37:45Z",
"creator": "dragonstyle",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": "v1.4",
"number": 2285,
"state": "open",
"title": "`lang` provided under `format` key not respected when rendering books... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2283
<div type='discussions-op-text'>
<sup>Originally posted by **jhchou** September 4, 2022</sup>
Is there a way to specify `target="_blank` in `href`'s in YAML's, for example in `about.qmd` or the `navbar:` in `_quarto.yml`?
As mentioned... | {
"assignee": "dragonstyle",
"comments": 1,
"created_at": "2022-09-04T13:14:32Z",
"creator": "dragonstyle",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "v1.3",
"number": 2284,
"state": "closed",
"title": "Support `target` for NavItems (e.g. about page... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/2278
<div type='discussions-op-text'>
<sup>Originally posted by **mavam** September 3, 2022</sup>
I'm outputting my qmd in GFM, which puts code and output adjacent to each other. I would like to wrap *only the code* in a `<details>` section:
... | {
"assignee": "jjallaire",
"comments": 4,
"created_at": "2022-09-03T23:17:41Z",
"creator": "mcanouil",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "v1.2",
"number": 2279,
"state": "closed",
"title": "[FR] Extend `code-fold: true` to other formats such... |
### Bug description
[Following pandoc's documentation](https://pandoc.org/MANUAL#on-all-slides-beamer-reveal.js-pptx), I have been using the following code in a qmd document I want to be rendered as a revealjs and where I want the title's slide having a specific background.
```qmd
---
title: "My Fancy title"
t... | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2022-09-03T16:06:39Z",
"creator": "ccamara",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 2277,
"state": "closed",
"title": "`data-background-color` property stopped working in quarto 1.1.1... |
### Bug description
I am struggling to label multiple equations placed within `$$ \begin{align} ... \end{align} $$`.
This works flawlessly...
```
$$
\begin{align}
a &= 0+1 \\
b &= 2+3 \\
c &= 4+5
\end{align}
$$ {#eq-abc}
see @eq-abc.
```
...but neither of these work:
```
$$
\begin{align}
a &= ... | {
"assignee": "cscheid",
"comments": 5,
"created_at": "2022-09-03T09:26:30Z",
"creator": "HelenaLC",
"is_pull_request": false,
"labels": [
"bug",
"crossref"
],
"locked": false,
"milestone": "v1.4",
"number": 2275,
"state": "open",
"title": "referencing equations inside `$$ \\begin{align}... |
Hello, I am using quarto to build a blog. I have a problem. I need the URL address of each article. How can I solve it? I can only get the title of the article through meta, eg:`{{< meta date >}}`, but I can't find the data related to the URL address
| {
"assignee": null,
"comments": 3,
"created_at": "2022-09-03T02:52:44Z",
"creator": "zoushucai",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": null,
"number": 3381,
"state": "closed",
"title": "How to get the URL of a web page",
"url": "https://github.com/quarto-dev/quart... |
### Bug description
Issue taken from [Stack Overflow](https://stackoverflow.com/questions/73548259/tabsets-not-rendering-datatables-properly-for-quarto-revealjs-presentation) and is reproducible on my system (macOS, latest) with Quarto `1.1.179`. Problem is that in later slides some of the DT tables aren't rendered (u... | {
"assignee": "jjallaire",
"comments": 8,
"created_at": "2022-09-02T14:58:11Z",
"creator": "rich-iannone",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2271,
"state": "closed",
"title": "Issue rendering multiple DT tables in multiple `panel-t... |
### Bug description
Taken from [Community](https://community.rstudio.com/t/rstudioapi-askforpassword-function-in-quarto/146254) (2022-01-01):
When running RMD documents I use the rstudioapi::askForPassword function to push passwords to databases. This works both in interactive mode and when knitting.
However whe... | {
"assignee": "jjallaire",
"comments": 3,
"created_at": "2022-09-02T13:22:44Z",
"creator": "rich-iannone",
"is_pull_request": false,
"labels": [
"bug",
"upstream"
],
"locked": false,
"milestone": "Future",
"number": 2269,
"state": "closed",
"title": "Cannot use `rstudioapi::askForPasswor... |
### Bug description
When I'm trying to save a self-contained HTML file to a specific file, it appears that it doesn't contain any CSS. Everything is file when `output-file` is not specified:
without output-file in the YAML header:
![image](https://user-images.githubusercontent.com/56514985/188110451-4e9de7b1-baf9-... | {
"assignee": "dragonstyle",
"comments": 3,
"created_at": "2022-09-02T09:39:01Z",
"creator": "davidbudzynski",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 2266,
"state": "closed",
"title": "Self-contained feature does not include CSS when ou... |
Beamer reference from [here](https://quarto.org/docs/reference/formats/presentations/beamer.html) does not list the `theme` format option, but it does exist, i.e. the following works:
```
format:
beamer:
theme: Madrid
```
The reference should be updated to include `theme`. | {
"assignee": "cscheid",
"comments": 0,
"created_at": "2022-09-01T21:31:41Z",
"creator": "nikcleju",
"is_pull_request": false,
"labels": [
"enhancement",
"yaml-validation"
],
"locked": false,
"milestone": "v1.3",
"number": 3377,
"state": "closed",
"title": "Beamer reference does not list... |
Looks like we're either blocked on pandoc here: https://github.com/jgm/pandoc/issues/8268, or we have to ask users to install Python2 via homebrew etc. | {
"assignee": "cscheid",
"comments": 1,
"created_at": "2022-09-01T17:44:11Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": "v1.2",
"number": 2259,
"state": "closed",
"title": "Python filters don't work on Monterey 12.3 and later",
"url": "https://gi... |
### Bug description
I'm working on some course materials where I would like to embed stan models in a quarto document but currently models that I can successfully compile interactively will fail when rendering the document. The issue appears to be that since quarto is an x86 executable it is causing confusion with sta... | {
"assignee": "cscheid",
"comments": 11,
"created_at": "2022-09-01T16:48:28Z",
"creator": "rundel",
"is_pull_request": false,
"labels": [
"bug",
"needs-repro"
],
"locked": false,
"milestone": "v1.2",
"number": 2258,
"state": "closed",
"title": "quarto + stan + m1 compilation issue",
"u... |
it is - in principle - possible to test different versions with the [Windows Sandbox (& winget)](https://github.com/microsoft/winget-pkgs/blob/master/doc/tools/SandboxTest.md). I say "in principle" because it does not seem to work for quarto at the moment. `quarto -V` or `quarto check` don't show any output in the Sand... | {
"assignee": null,
"comments": 12,
"created_at": "2022-09-01T16:00:52Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug",
"windows"
],
"locked": false,
"milestone": "v1.2",
"number": 2255,
"state": "closed",
"title": "Running Quarto in Windows Sandbox does not work",
"... |
{
"assignee": "cscheid",
"comments": 2,
"created_at": "2022-09-01T14:55:19Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"enhancement",
"pandoc-lua"
],
"locked": false,
"milestone": "Future",
"number": 2254,
"state": "closed",
"title": "`quarto.utils.dump` doesn't work w... | |
We get this on the latest IPython:
```
/var/folders/nm/m64n9_z9307305n0xtzpp54m0000gn/T/ipykernel_5300/1749505576.py:69: DeprecationWarning: Importing display from IPython.core.display is deprecated since IPython 7.14, please import from IPython display
from IPython.core.display import display, HTML
``` | {
"assignee": "cscheid",
"comments": 0,
"created_at": "2022-09-01T14:36:43Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": null,
"number": 2253,
"state": "closed",
"title": "Deprecation message on IPython 7.14",
"url": "https://... |
### Bug description
```md
## Example
I'm going to pull in some dates calculated after this markdown block with Observable.
This works fine:
* Begin date: ${the_dates[0]}
* End date ${the_dates[1]}
So does this:
**${the_dates[1]}**
But this does **not** work!
The range is between **${the_da... | {
"assignee": "cscheid",
"comments": 10,
"created_at": "2022-09-01T13:23:25Z",
"creator": "astrowonk",
"is_pull_request": false,
"labels": [
"bug",
"wontfix"
],
"locked": false,
"milestone": "v1.3",
"number": 2252,
"state": "closed",
"title": "Markdown formatting around observable inline... |
### Bug description
# repex
**.qmd:**
````
```{r}
url1 <- "https://www.haustier-news.de/welpen/wp-content/uploads/2020/09/pomeranian.jpg"
url2 <- "https://www.allthingsdogs.com/wp-content/uploads/2020/01/White-Pomeranian-Feature-678x381.jpg"
```
# this works
```{r}
#| label: a-pomeranian
#| out-width... | {
"assignee": "cscheid",
"comments": 9,
"created_at": "2022-09-01T12:51:34Z",
"creator": "HelenaLC",
"is_pull_request": false,
"labels": [
"bug",
"crossref"
],
"locked": false,
"milestone": "v1.4",
"number": 2251,
"state": "open",
"title": "`#| out/fig-width:` ignored when specifying `#|... |
I ran into this problem while deploying a quarto website to Rstudio Connect, but it may be useful for any site that's rendered with a cron job. Basically my site relies on long-running computation that I only want to render on Rstudio Connect The behaviour I'm after is:
1) Document uses frozen output when `quarto r... | {
"assignee": null,
"comments": 11,
"created_at": "2022-09-01T12:48:49Z",
"creator": "GShotwell",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "v1.2",
"number": 2250,
"state": "closed",
"title": "Config-based freezing",
"url": "https://github.com/qua... |
Just opening this to track idea from https://github.com/quarto-dev/quarto-cli/discussions/2230
Maybe we could add a feature to add a `quarto.utils.input_files()` (or similar) to easily access the source `.qmd` from a Lua filter.
Could be useful in certain case, and `PANDOC_STATE.input_files` can probably help fo... | {
"assignee": "cscheid",
"comments": 21,
"created_at": "2022-09-01T12:34:30Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"enhancement",
"pandoc-lua"
],
"locked": false,
"milestone": "v1.3",
"number": 2249,
"state": "closed",
"title": "[FR] New Lua utility function to acce... |
### Bug description
using the element below in _quarto.yml
```
format:
html:
theme:
dark: darkly
light: flatly
```
the page shows in dark mode per default, but if toggled to light mode, the site goes back to dark mode when navigating to a different page.
(This does not happen if light ... | {
"assignee": "dragonstyle",
"comments": 2,
"created_at": "2022-09-01T10:40:22Z",
"creator": "jcolomb",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2248,
"state": "closed",
"title": "website: dark mode as default: toggle to light mode not ke... |
### Bug description
**current behavior:**
- `#| fig-cap-location: margin` has no effect in code chunks that render multiple plots
**expected/desired behavior:**
- the main caption is placed in the margin
- sub-captions (a)-(z) are placed in the margin, underneath the main caption
- alternatively, these stay... | {
"assignee": "dragonstyle",
"comments": 0,
"created_at": "2022-09-01T10:17:47Z",
"creator": "HelenaLC",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2247,
"state": "closed",
"title": "`#| fig-cap-location:` is ignored by multi-plot code chun... |
### Bug description
# summary
**current behavior:**
- a code chunk that renders multiple plots with `#| fig-cap:` set duplicates the caption
- consequently, the figure counter is incremented twice
**expected/desired behavior:**
- sub-captions are optional: not specifying `#| fig-subcap:` gives a main capt... | {
"assignee": "dragonstyle",
"comments": 3,
"created_at": "2022-09-01T10:11:32Z",
"creator": "HelenaLC",
"is_pull_request": false,
"labels": [
"bug",
"crossref"
],
"locked": false,
"milestone": "v1.4",
"number": 2246,
"state": "open",
"title": "Float crossrefs with unlabeled subfloats",
... |
### Bug description
Hi Guys
Everytime I try to render a Quarto documento to PDF I got an error about LaTeX and xelatex, could you help me with that?
Working with Windows 10, R 4.2.1, RStudio 2022.07.1
... | {
"assignee": null,
"comments": 5,
"created_at": "2022-09-01T04:21:18Z",
"creator": "lightbluetitan",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "Future",
"number": 2245,
"state": "open",
"title": "Can't render Quarto to PDF",
"url": "https://github.com/qu... |
### Bug description
Admittedly complicated notebooks not rendering correctly.
The image below shows part of the render of
https://gitlab.com/ea42gh/elementary-linear-algebra/-/blob/master/notebooks/04_MatrixAlgebra.ipynb
The directory contains a number of notebooks that all fail...
![foo](https://user-images.git... | {
"assignee": null,
"comments": 1,
"created_at": "2022-08-31T22:00:30Z",
"creator": "ea42gh",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": null,
"number": 2243,
"state": "closed",
"title": "Jupiter notebook to html render problems",
"url": "https://github.com/quarto-dev/... |
### Bug description
When using the YAML options `code-block-bg` and `code-block-border-left`, I obtain different behavior in HTML and PDF. The HTML version has the expected behavior, while the PDF does not.
## Code
### HTML Document
````
---
title: "test_html"
format:
html:
code-block-bg: "#f3f3f... | {
"assignee": "dragonstyle",
"comments": 1,
"created_at": "2022-08-31T18:56:28Z",
"creator": "maxdrohde",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 2242,
"state": "closed",
"title": "Different code block color behavior in HTML and PDF outp... |
In order to have numbered callouts (e.g., for cross-referenceable exercises and solutions), I have attempted to
- set callout captions to be empty via the *_quarto.yml* file
- use "#exr-" (or similar) as headers in the callouts
with the somewhat unexpected result that
- printed names (here, "Exercise") are re... | {
"assignee": "cscheid",
"comments": 1,
"created_at": "2022-08-31T17:58:27Z",
"creator": "HelenaLC",
"is_pull_request": false,
"labels": [
"enhancement",
"crossref"
],
"locked": false,
"milestone": "v1.4",
"number": 2241,
"state": "open",
"title": "unexpected behavior in callouts using `... |
We would like to place various contents inside collapsable callouts. Often, these include margin contents (e.g., notes via `[...]{.aside}`, figures, etc.). At the moments,
1. callouts are expanded to full page width
2. the collapse option is broken
Ideally, we would like
- margin-content to be placed in the mar... | {
"assignee": null,
"comments": 0,
"created_at": "2022-08-31T17:53:32Z",
"creator": "HelenaLC",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "v1.2",
"number": 2240,
"state": "closed",
"title": "margin content expands callouts to full page width",
"ur... |
In order to obtain numbered callouts (e.g., for cross-referenceable exercises and solutions), I have attempted to
- set callout captions to be empty via `callout-x-caption: ""`
- use `#exr-` (or similar) to get numbered captions instead
with the following unexpected outcome:
1. The printed name (here, "Exerci... | {
"assignee": null,
"comments": 3,
"created_at": "2022-08-31T17:22:43Z",
"creator": "HelenaLC",
"is_pull_request": false,
"labels": [
"crossref"
],
"locked": false,
"milestone": "v1.2",
"number": 2239,
"state": "closed",
"title": "unexpected behavior with callout using `#xxx-` label as heade... |
https://github.com/quarto-dev/quarto-cli/blob/main/package/src/common/archive-binary-dependencies.ts#L113-L123
This needs to fail on a bad URL, otherwise we archive a bad dependency. | {
"assignee": "jjallaire",
"comments": 0,
"created_at": "2022-08-31T17:22:34Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2238,
"state": "closed",
"title": "archive-binary-dependencies needs to check for response stat... |
### Bug description
While there are no partials in the revealjs pandoc template directory, there *seems* to be some support for them. In particular, if you try to specify a template partial in the document YAML header, such as:
````yaml
format:
revealjs:
template-partials:
- my-partial.html
````
... | {
"assignee": "dragonstyle",
"comments": 4,
"created_at": "2022-08-31T16:27:06Z",
"creator": "ryanraaum",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.2",
"number": 2236,
"state": "closed",
"title": "Support for revealjs template partials?",
"url": "http... |
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