page_content stringlengths 0 46.9k | metadata dict |
|---|---|
From https://community.rstudio.com/t/quarto-errors-out-when-calling-dt-inline/159894/3
This works in R Mardown
````markdown
---
title: "Test"
output: html_document
---
```{r da-table}
#| echo: false
#| essage: FALSE
atsi.need <- DT::datatable(iris)
```
Under ESSA student groups are identified for Ad... | {
"assignee": "cderv",
"comments": 0,
"created_at": "2023-02-17T11:10:51Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4402,
"state": "closed",
"title": "Inserting HTML widgets with knitr inline content is not working th... |
From https://community.rstudio.com/t/how-to-fix-the-title-banner-to-the-top-of-page/158650/2
> I am looking for a solution to fix the title banner to the top of the rendered html page, while the rest of the page remains scrollable.
Currently we have no option for that. This issue track the idea of adding one. Upv... | {
"assignee": null,
"comments": 3,
"created_at": "2023-02-17T09:26:41Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "Future",
"number": 4401,
"state": "open",
"title": "[FR] Allow a configuration to make the navbar sticky in Quart... |
I've been using Quarto for my personal page and blog for a few months now, but starting a few weeks back I haven't been able to access the internal preview feature from VS code. When I click render, the terminal executes the command
`quarto preview /Users/shio
nfukuzawa/shifubear.github.io/posts/lglar-ch3/index.qmd -... | {
"assignee": null,
"comments": 5,
"created_at": "2023-02-17T01:27:56Z",
"creator": "shifubear",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": null,
"number": 4408,
"state": "closed",
"title": "VS Code internal preview not working anymore",
"url": "https://github.com/quar... |
### Bug description
When using the multi-format feature, formats that resolve to the same file extension aren't distinguished. For example, for a file called `test.qmd` with both `html` and `revealjs` formats specified, the RevealJS link points to `test.html` and gets the HTML page, not the revealJS presentation.
... | {
"assignee": "dragonstyle",
"comments": 1,
"created_at": "2023-02-16T23:38:13Z",
"creator": "cwickham",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4398,
"state": "closed",
"title": "Multi-format links don't distinguish formats with same ex... |
I haven't been able to get this working. Here's a minimal repo: [https://github.com/andrewpbray/publish-profile](https://github.com/andrewpbray/publish-profile).
`quarto render --profile alternate` works just fine and `quarto publish` works just fine (it goes to `gh-pages`). But when I run `quarto publish --profile ... | {
"assignee": "jjallaire",
"comments": 2,
"created_at": "2023-02-16T21:47:46Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug",
"publishing"
],
"locked": false,
"milestone": "v1.3",
"number": 4396,
"state": "closed",
"title": "`quarto publish --profile` is not working",
... |
> Yes, while running quarto, it kept giving the message that deno upgrade is available
Oof, that's super annoying, I'm sorry. We're supposed to have a command-line flag to disable that warning, but clearly it's not working for you. @cderv do you see this upgrade nag on windows?
_Originally posted by @cscheid in h... | {
"assignee": "cderv",
"comments": 5,
"created_at": "2023-02-16T21:26:56Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"windows"
],
"locked": false,
"milestone": "v1.4",
"number": 4394,
"state": "closed",
"title": "Ensure deno upgrade warning deactivation works on Windows ",
... |
### Bug description
When wide tibbles are displayed in revealjs slides, they wrap onto a second line.
```` md
---
title: "Untitled"
format: revealjs
editor: visual
---
## A dataset
```{r}
library(dplyr)
bind_cols(mtcars, mtcars) |> as_tibble()
```
````
In the console, it looks like this:
![Screens... | {
"assignee": null,
"comments": 3,
"created_at": "2023-02-16T19:39:56Z",
"creator": "Aariq",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": null,
"number": 4392,
"state": "closed",
"title": "tibble width doesn't match display width in revealjs ",
"url": "https://github.com... |
### Bug description
This document renders correctly:
```
---
title: Here is a first title
author: Iam Author
format:
pdf:
mainfont: Latin Modern Roman
sansfont: Latin Modern Roman
#pdf-engine: pdflatex
---
# First section
Here is some body text
```
If I remove the hash in front of `pdf... | {
"assignee": "cwickham",
"comments": 3,
"created_at": "2023-02-16T18:22:36Z",
"creator": "rmcd1024",
"is_pull_request": false,
"labels": [
"bug",
"documentation"
],
"locked": false,
"milestone": "v1.4",
"number": 4390,
"state": "closed",
"title": "Font options don't work with pdflatex",... |
### Bug description
Is this a bug or am I doing something incorrect?
quarto version: 1.3.203
Windows 10
deno 1.30.3 (release, x86_64-pc-windows-msvc)
v8 10.9.194.5
typescript 4.9.4
1) Created a new book
```
C:\sw>quarto create-project qbook2 --type book
Creating project at G:\gdac\qbook2:
- Created _qu... | {
"assignee": "dragonstyle",
"comments": 6,
"created_at": "2023-02-16T16:45:19Z",
"creator": "fortunewalla",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4388,
"state": "closed",
"title": "quarto create-project new book preview breaks chapter... |
### Bug description
Setting: Quarto Website using a theme.
Objective: I would like to avoid downloading google fonts via the google api
Idea: Storing the fonts locally and include them via a custom scss file
`_quarto.yml`:
```yml
format:
html:
theme:
light: [flatly, light.scss]
```
`light... | {
"assignee": null,
"comments": 6,
"created_at": "2023-02-16T16:04:10Z",
"creator": "Klesel",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4387,
"state": "closed",
"title": "Quarto Website: Using local fonts (Google Fonts)",
"url": "https://g... |
```powershell
mkdir tests
cd tests
echo "# test" >> test.qmd
```
Rendering ok
```powershell
> quarto render test.qmd
pandoc
to: html
output-file: test.html
standalone: true
section-divs: true
html-math-method: mathjax
wrap: none
default-image-extension: png
metadata
document-css: fa... | {
"assignee": null,
"comments": 2,
"created_at": "2023-02-16T12:11:17Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug",
"publishing"
],
"locked": false,
"milestone": "v1.3",
"number": 4384,
"state": "closed",
"title": "publishing to quarto-pub does not work without a Qu... |
````markdown
---
title: "test"
format: html
keep-md: true
---
```{python}
import numpy as np
import pandas as pd
```
```{python}
#| label: fig-series
#| fig-cap: Tests Series
ts = pd.Series(np.random.randn(1000), index=pd.date_range('1/1/2000', periods=1000))
ts = ts.cumsum()
ts.plot()
```
````
... | {
"assignee": "cscheid",
"comments": 3,
"created_at": "2023-02-16T11:43:10Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug",
"third-party",
"crossref"
],
"locked": false,
"milestone": "v1.4",
"number": 4382,
"state": "open",
"title": "Correctly caption figures produ... |
### Bug description
When rendering a qmd document to pdf using Rstudio's (2022.12.0 Build 353) quarto engine (v. 1.2.269) from the command line and using keep-tex, the .tex file permissions are 600, rather than the directory default. This is problematic in my usage case because I rely on group permissions. Knitting / ... | {
"assignee": "cderv",
"comments": 7,
"created_at": "2023-02-16T11:40:58Z",
"creator": "ucpresearch",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4380,
"state": "closed",
"title": "Wrong linux permissions when rendering",
"url": "https://g... |
### Bug description
I have the following in `_extensions/resources_example`:
```
.
├── _extension.yml
└── resources
└── test_file.pdf
```
`_extension.yml`:
```yaml
title: Quarto issue 4377
author: Toni
version: 1.0.0
quarto-required: ">=1.2.0"
contributes:
format:
common:
format... | {
"assignee": "dragonstyle",
"comments": 2,
"created_at": "2023-02-16T10:21:34Z",
"creator": "tverbeiren",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4377,
"state": "closed",
"title": "Using a directory in `format-resources` for extensions ... |
Following #3294 and its fix #3433
this is supposed to work
````yaml
---
title: "test"
format: html
keep-md: true
---
```{mermaid}
%%| fig-cap: Mermaid diagram
%%| fig-align: center
flowchart TB
a --> b
b --> c
```
````
However it is not.
This is because we do in JS now
https://github.co... | {
"assignee": "cscheid",
"comments": 1,
"created_at": "2023-02-16T08:48:39Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug",
"crossref",
"mermaid"
],
"locked": false,
"milestone": "v1.4",
"number": 4376,
"state": "open",
"title": "Center mermaid diagram in a html do... |
### Bug description
When using Python via `vscode` Jupyter Notebook, adding the `label` and `fig-cap` to respective code cell not rendering properly in website project.
Expected one caption per figure but website project renders like subcaption, see image below.
Reproducible notebook here:
https://github.com/l... | {
"assignee": "cscheid",
"comments": 8,
"created_at": "2023-02-16T04:15:00Z",
"creator": "lgonzalezsa",
"is_pull_request": false,
"labels": [
"bug",
"third-party"
],
"locked": false,
"milestone": "v1.4",
"number": 4374,
"state": "open",
"title": "Python figure cross-reference missing cap... |
### Bug description
I'm using a lua filter I got from [here](https://stackoverflow.com/a/73787848/13945974) to change the orientation of certain pages so that the figures within them end up larger, but they end up the same size as in the portrait pages. Increasing `out-width` doesn't help.
[2023-02-16_quarto.qmd.... | {
"assignee": "dragonstyle",
"comments": 1,
"created_at": "2023-02-16T00:43:04Z",
"creator": "shirdekel",
"is_pull_request": false,
"labels": [
"bug",
"triaged-to"
],
"locked": false,
"milestone": "v1.4",
"number": 4373,
"state": "open",
"title": "Figures not adapting width for landscape... |
### Bug description
Currently, with Quarto 1.3.203, publish options still list RStudio Connect:
```
quarto publish
❯ Quarto Pub
GitHub Pages
RStudio Connect
Netlify
```
That should be updated to Posit Connect. I _think_ these are the relevant spots: https://github.com/search?q=repo%3Aquarto-dev%2Fqua... | {
"assignee": "dragonstyle",
"comments": 0,
"created_at": "2023-02-15T20:23:32Z",
"creator": "mine-cetinkaya-rundel",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4371,
"state": "closed",
"title": "`quarto publish` RStudio -> Posit Connect",
... |
### Bug description
The following file seems to return an error (LaTeX Error: Not in outer par mode) only with `echo:false`. Tested on MacOS and Windows.
````
---
format: pdf
---
::: {#fig-12 layout-ncol=2}
```{r}
#| fig-cap: "f1"
#| echo: false
plot(1)
```
```{r}
#| fig-cap: "f2"
plot(2)
```
... | {
"assignee": "cscheid",
"comments": 1,
"created_at": "2023-02-15T18:43:17Z",
"creator": "AQLT",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.4",
"number": 4370,
"state": "open",
"title": "PDF side-by-side figure with caption error with echo: false",
"ur... |
### Bug description
I'm getting to the point in my book where I need to show algorithms. I couldn't get [Christophe Dervieux's Rmd instructions](https://rpubs.com/cderv/pseudocodejs) to work, so I made a reprex repo (reporex?).
https://github.com/topepo/quarto-pseudocode-test
https://topepo.github.io/quarto-pseud... | {
"assignee": "cderv",
"comments": 12,
"created_at": "2023-02-15T18:42:23Z",
"creator": "topepo",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "Future",
"number": 4369,
"state": "open",
"title": "pseudocode.js algorithms",
"url": "https://github.com/... |
From #4350, it seems that we can't set v8-flags with released versions of quarto (as opposed to versions running off of the git repo). This is a problem since setting v8-flags is how we increase the heap size.
Should we proactively set a larger max heap size based on a guess of the system's max memory? | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2023-02-15T18:30:24Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"bug",
"needs-repro"
],
"locked": false,
"milestone": "v1.3",
"number": 4368,
"state": "closed",
"title": "OOM workarounds: quarto releases don't appe... |
See #4356. We should detect these in a filter and either emit a warning or automatically enable `number-sections: true`. | {
"assignee": "cscheid",
"comments": 0,
"created_at": "2023-02-15T15:38:18Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"enhancement",
"crossref"
],
"locked": false,
"milestone": "v1.4",
"number": 4364,
"state": "open",
"title": "Section crossref in pdf format need `num... |
### Bug description
Running
```{r}
ojs_define(my_ojs = my_sw)
```
yields error message:
> Error in ojs_define(my_ojs = my_sw) :
could not find function "ojs_define"
I've tried this on
- Windows 10 Enterprise ; RStudio 2022.12.0 ; Quarto v 1.1.179
- Windows 10 Enterprise ; RStudio 2022.12.0+353 ; Qua... | {
"assignee": null,
"comments": 1,
"created_at": "2023-02-15T15:24:49Z",
"creator": "libjohn",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4363,
"state": "closed",
"title": "cannot find ojs_define function within RStudio quarto doc",
"url": ... |
### Bug description
````md
---
title: "Untitled"
format: pdf
editor: visual
---
Please see @ref1.
## Quarto {#ref1}
Quarto enables you to weave together content and executable code into a finished document. To learn more about Quarto see <https://quarto.org>.
````
I hope I'm not making a simple mis... | {
"assignee": null,
"comments": 2,
"created_at": "2023-02-15T00:35:19Z",
"creator": "matthewgson",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4356,
"state": "closed",
"title": "Cross reference does not work on headings (pdf)",
"url": "https... |
For a `revealjs` document format, Mathjax is configured as follows
```
math: {
mathjax: 'https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.0/MathJax.js',
...........
},
},
```
while for a `book`, we get a more recent version of MathJax
```
<script src="[https://cdn.jsdelivr.... | {
"assignee": "cderv",
"comments": 4,
"created_at": "2023-02-14T16:46:01Z",
"creator": "sbrisard",
"is_pull_request": false,
"labels": [
"upstream",
"revealjs"
],
"locked": false,
"milestone": "v1.4",
"number": 4493,
"state": "open",
"title": "Project format `revealjs` uses old version o... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/4349
<div type='discussions-op-text'>
<sup>Originally posted by **kris-brown** February 14, 2023</sup>
I'm not sure what the cause of this new behavior is, but after adding a couple hundred pages to my website (mostly text and quite short) I b... | {
"assignee": "cscheid",
"comments": 16,
"created_at": "2023-02-14T16:39:27Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4350,
"state": "closed",
"title": "Fatal javascript OOM in Ineffective mark-compacts near heap l... |
> Adding figure creation in the test qmd file, we can see that the the figure dir is in another folder containing format in the name
And so now I have it all covered. Probably another issue but related.
The directory with format in the name is created by **rmarkdown** when R chunks are added. I don't think Quart... | {
"assignee": "cderv",
"comments": 1,
"created_at": "2023-02-14T15:48:14Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.4",
"number": 4347,
"state": "open",
"title": "Specific handling for custom writer lua file for R Markdown processi... |
I am trying to render a pdf using the asc extention: https://github.com/quarto-journals/acs
I am running quarto version 1.2.335 on windowsWindows 10 Enterprise Version 10.0.19044 Build 19044 through Rstudio.
I set up a new dir containing the extention template:
`quarto use template quarto-journals/acs`
Then... | {
"assignee": "dragonstyle",
"comments": 3,
"created_at": "2023-02-14T10:46:16Z",
"creator": "M-Russell",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": null,
"number": 4346,
"state": "closed",
"title": "Extention filename incorrect OS error",
"url": "https://github.com/q... |
Quarto gives the option to make Python/R variables available to OJS via the `ojs_define()` function. However, when working inside a Jupyter notebook `ojs_define()` is obviously not defined. Current workaround requires converting to .qmd first then adding a Python/R snippet using `ojs_define()` and then rendering the .q... | {
"assignee": null,
"comments": 2,
"created_at": "2023-02-13T22:13:35Z",
"creator": "IliasAarab",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": null,
"number": 4344,
"state": "closed",
"title": "Using ojs_define() inside a Jupyter notebook",
"url": "https://github.com/qua... |
Qualified paths were added in https://github.com/quarto-dev/quarto-cli/pull/2429
* https://github.com/quarto-dev/quarto-cli/blob/main/src/core/qualified-path.ts
Currently, tests are not made for windows: https://github.com/quarto-dev/quarto-cli/blob/main/tests/unit/paths/qualified-path.test.ts
In #4099, I'll ... | {
"assignee": "cderv",
"comments": 0,
"created_at": "2023-02-13T19:45:06Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"windows"
],
"locked": false,
"milestone": "Future",
"number": 4339,
"state": "open",
"title": "Adapt tests for qualified paths for Windows",
"url": "https:... |
From our `tests` folder
````
quarto render docs\smoke-all\2023\01\05\notebook-preview-complex.qmd --to html
````
This throws an error
````
ERROR: La syntaxe du nom de fichier, de répertoire ou de volume est incorrecte. (os error 123), stat 'docs\smoke-all\2023\01\05\https:\www.kaggle.com\code\kanncaa1\data-scie... | {
"assignee": "dragonstyle",
"comments": 3,
"created_at": "2023-02-13T16:17:07Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug",
"windows"
],
"locked": false,
"milestone": "v1.3",
"number": 4337,
"state": "closed",
"title": "`notebook-view` appends URL to figure path so... |
### Bug description
I've been working on a custom code syntax theme and have run into a couple of limitations. I made [a repo with a basic blog website](https://github.com/gadenbuie/quarto-reprex/tree/website-syntax-styles) that demonstrates the problem. The links below are to specific commits or diffs (I also describ... | {
"assignee": "dragonstyle",
"comments": 1,
"created_at": "2023-02-13T14:10:59Z",
"creator": "gadenbuie",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4334,
"state": "closed",
"title": "Blog posts include inlined CSS styles that are hard to o... |
From https://github.com/quarto-dev/quarto-cli/discussions/2263#discussioncomment-4942301
See if we can integrate part of the doc of [reveal/multiplex](https://github.com/reveal/multiplex) about setting things up. | {
"assignee": "cderv",
"comments": 0,
"created_at": "2023-02-13T10:13:12Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"documentation"
],
"locked": false,
"milestone": "v1.4",
"number": 4495,
"state": "open",
"title": "Improve doc about multiplex revealjs extension",
"url": ... |
### Bug description
The search bar for Quarto websites ignores code before the first section heading.
**Reprex:** Create a template Quarto site and adjust the `.qmd` per below so that there is `library(dplyr)`, followed by a section heading, then `library(tidyr)`. After rendering, a site search for `lib` finds `l... | {
"assignee": null,
"comments": 0,
"created_at": "2023-02-12T21:00:57Z",
"creator": "cgoo4",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4329,
"state": "closed",
"title": "Site search results exclude code before a section heading",
"url": "h... |
### Bug description
When trying to insert paged table: the output is too big to fit on the screen:
[Source to reproduce](https://pastebin.com/A2zTMfqY)
Result with 100% page zoom:
Result with 50% p... | {
"assignee": null,
"comments": 2,
"created_at": "2023-02-12T18:48:22Z",
"creator": "davidbudzynski",
"is_pull_request": false,
"labels": [
"bug",
"duplicate",
"verify-fixed"
],
"locked": false,
"milestone": null,
"number": 4328,
"state": "closed",
"title": "Paged tables too big to f... |
To reproduce my error, run `quarto render` | {
"assignee": null,
"comments": 5,
"created_at": "2023-02-12T16:58:36Z",
"creator": "Waterkin",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": null,
"number": 4326,
"state": "closed",
"title": "LaTeX Error: Cannot determine size of graphic in loss.webp (no BoundingBox).",
... |
### Bug description
_No response_
### Checklist
- [X] Please include a minimal, fully reproducible example in a single .qmd file? Please provide the whole file rather than the snippet you believe is causing the issue.
- [X] Please [format your issue](https://quarto.org/bug-reports.html#formatting-make-githubs-markdo... | {
"assignee": "dragonstyle",
"comments": 2,
"created_at": "2023-02-12T03:24:25Z",
"creator": "mikheyev",
"is_pull_request": false,
"labels": [
"bug",
"articles"
],
"locked": false,
"milestone": "v1.3",
"number": 4324,
"state": "closed",
"title": "Table endnotes don't work in margins",
... |
I would like to figure out a way to make presenter notes for my Quarto presentations kept private and something I could add to my .gitignore. Perhaps the notes could be created in a child document that can be rendered with the main presentation, but I don't have to bare my soul (and all the reminders to myself) in the ... | {
"assignee": null,
"comments": 6,
"created_at": "2023-02-10T19:38:52Z",
"creator": "kmasiello",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "Future",
"number": 4318,
"state": "open",
"title": "FR: Allow for presenter notes in Quarto presentations to ... |
````
---
format: html
---
```{r}
#| include: false
library(tidyverse)
library(gt)
```
```{r}
#| echo: false
#| tbl-cap: "Caption"
#| label: tbl-test
dat <- tribble(~a, ~x, ~y, ~z,
"A", 1, 12, 13,
"B", 2, 9, 11)
dat %>%
gt() %>%
tab_spanner(
label = "Subheader",
columns = c(x,... | {
"assignee": "cscheid",
"comments": 10,
"created_at": "2023-02-10T17:21:00Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"bug",
"tables"
],
"locked": false,
"milestone": "v1.3",
"number": 4316,
"state": "closed",
"title": "gt table spanners and quarto captions",
"url"... |
### Bug description
Hello,
I try to center all figures in my document with a YAML argument so I tried the generic option `fig-align`
````
---
title: "Untitled"
format: html
fig-align: center
---
```{r}
knitr::opts_chunk$get("fig.align")
```
````
But it is not used. However, with the "old" syntax
... | {
"assignee": "cscheid",
"comments": 4,
"created_at": "2023-02-10T15:30:55Z",
"creator": "abichat",
"is_pull_request": false,
"labels": [
"bug",
"crossref"
],
"locked": false,
"milestone": "v1.4",
"number": 4315,
"state": "open",
"title": "fig-align in YAML doesn't work",
"url": "https... |
`ojs_define()` is a function that can be used in Quarto cells for R Julia and Python. When used in such chunk, one can't execute the cell interactively because the function only works when rendering the whole document.
However, maybe it would be easier for our integrated tool (IDE, VSCODE, ...) to "ignore" the ojs_... | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2023-02-10T15:30:01Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "v1.4",
"number": 4314,
"state": "open",
"title": "Don't fail running chunk interactively in IDE or VSCODE wh... |
### Bug description
I am trying to preview a simple docusaurus website on windows 10 thought VSCode but I got the following error:
``` console
$quarto preview
Preparing to preview
Watching files for changes
ERROR: NotFound: program not found
```
I have to say I have no clue which program is not found.
I tr... | {
"assignee": "cderv",
"comments": 11,
"created_at": "2023-02-10T10:51:58Z",
"creator": "FabienSe",
"is_pull_request": false,
"labels": [
"bug",
"windows"
],
"locked": false,
"milestone": null,
"number": 4312,
"state": "closed",
"title": "Impossible to start preview of docusaurus website... |
In Quarto website
Internal links to level 3 titles leads to the paragraph that follows the title and not to the title itself. | {
"assignee": null,
"comments": 1,
"created_at": "2023-02-10T10:42:29Z",
"creator": "wilcar",
"is_pull_request": false,
"labels": [
"bug",
"needs-repro"
],
"locked": false,
"milestone": null,
"number": 4311,
"state": "closed",
"title": "internal link offset",
"url": "https://github.com... |
### Bug description
Hi,
I have this input qmd file
~~~~
---
title: "Test Kakumbi 2018-2020"
format:
html:
toc-depth: 5
toc-location: left
footnotes-hover: true
---
<img src="file:///home/aborruso/lavagna/tmp file.png" style="width: 100%;"/>
~~~~
And this setting file
~~~~
sideb... | {
"assignee": null,
"comments": 2,
"created_at": "2023-02-10T10:03:32Z",
"creator": "aborruso",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.4",
"number": 4310,
"state": "closed",
"title": "spaces in filenames don't seem to always be handled correctly: a s... |
* Remove IJulia from your environment `import Pkg; Pkg.rm("IJulia")`
* Run a document with Julia in command line
````markdown
---
title: Julia
format: html
jupyter: julia-1.8
---
```{julia}
b = 2
```
````
```
> quarto render test.qmd
Starting julia-1.8 kernel...ERROR:
Kernel died before replying t... | {
"assignee": "cscheid",
"comments": 0,
"created_at": "2023-02-10T10:02:51Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": "v1.4",
"number": 4309,
"state": "open",
"title": "Show missing IJulia package error when daemon is used to and not only when `no-... |
For what it's worth I've found RStudio to be _currently_ inconsistent with chunk label prefixes as shown in the following ASCII encoded MWEs. I don't have chromium or tinytex installed on `quarto tools check`. Hopefully this is going to be fixed soon.
````markdown
---
title: "MWE 1"
format: html
---
### Envi... | {
"assignee": null,
"comments": 1,
"created_at": "2023-02-10T09:39:26Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": null,
"number": 4308,
"state": "closed",
"title": "dot diagram inconsistency with chunk label prefixes",
"url": "https://github.com/q... |
### Bug description
Searching `_*` in Quarto book crashes the browser tab. To reproduce the issue:
1. Go to https://r-pkgs.org/.
1. Type `_*` in the search box.
1. Click any result in the dropdown.
1. In Chrome, the browser tab crashes, showing
```
Aw, Snap!
Something went wrong while displaying this webpag... | {
"assignee": "dragonstyle",
"comments": 0,
"created_at": "2023-02-10T07:20:02Z",
"creator": "nanxstats",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4307,
"state": "closed",
"title": "Searching `_*` in Quarto book crashes browser",
"url":... |
### Bug description
This issue came up earlier today when a student was having problems identifying why their quarto document wasn't able to be rendered.
In particular, the student accidentally spaced the code chunk option one extra, that is:
````
```{sql}
#| label: test multiqueries -5
#| connection: db
... | {
"assignee": "cderv",
"comments": 9,
"created_at": "2023-02-10T06:08:38Z",
"creator": "coatless",
"is_pull_request": false,
"labels": [
"documentation",
"enhancement",
"upstream"
],
"locked": false,
"milestone": "v1.4",
"number": 4306,
"state": "open",
"title": "Unclear error messag... |
I hope this is not an issue specific to my machine/setup, but I have observed the following behavior. When quarto (via `quarto run`) is used to install the rmarkdown package on a windows machine, it seems to freeze up indefinitely. Other packages (e.g., magrittr) install fine via `quarto run`.
Call: `quarto run cod... | {
"assignee": null,
"comments": 3,
"created_at": "2023-02-09T17:09:09Z",
"creator": "pecanka",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": null,
"number": 4300,
"state": "closed",
"title": "Quarto run freezes when used to install rmarkdown (via quarto run)",
"url": "htt... |
### Bug description
When working with centered slides in RevealJS, aside and footnote sections overlap with content.
See the example and screenshot below.
Workaround: add a couple `<br>` blocks. :/
Operating system: macOS
````md
---
format:
revealjs:
transition: slide
controls: true
con... | {
"assignee": "dragonstyle",
"comments": 0,
"created_at": "2023-02-09T16:23:37Z",
"creator": "sagikazarmark",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4297,
"state": "closed",
"title": "Centered reveal slide content overlap with aside and... |
### Bug description
I'm not exactly sure what is the culprit.
Steps to reproduce:
- Clone `fastai/nbdev`
- Install nbdev if you don't have it already.
- `pip install -e .[dev]` in the `nbdev` directory.
- run `nbdev_docs`. It will fail towards the end:
```
[ 1/42] index.qmd
[ 2/42] explanations/index.qmd... | {
"assignee": "cscheid",
"comments": 4,
"created_at": "2023-02-09T14:31:41Z",
"creator": "xl0",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4295,
"state": "closed",
"title": "Quarto fails for `nbdev` starting with 1.3.181",
"url": "https:/... |
### Bug description
The inline citations of literature resources sometimes, wrongly, keeps the initials or first name with the last name, for some authors, where it shouldn't. Wrong:
![Screenshot from 2023-02-09 14-40-51](https://user-images.githubusercontent.com/520851/217829425-ec102af4-7d0e-47b0-baf0-7bcce0b1cdf... | {
"assignee": null,
"comments": 3,
"created_at": "2023-02-09T13:50:32Z",
"creator": "edzer",
"is_pull_request": false,
"labels": [
"bug",
"crossref"
],
"locked": false,
"milestone": null,
"number": 4294,
"state": "closed",
"title": "citations in tex sometimes keep first name or initials"... |
### Bug description
Hi,
TOC is rendered invalid from Jupyter notebook, when raw contains HTML comment.
See:
Attaching the notebook:
(I added additional suffix *.txt, so it can be uploaded. Remove it, before testing)
[Lekcia 08 - Webove stranky a HTML.ipynb.txt](https://github.com/quarto-dev/quarto-cli/fil... | {
"assignee": null,
"comments": 1,
"created_at": "2023-02-09T11:18:25Z",
"creator": "stefansimik",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4292,
"state": "closed",
"title": "Bad TOC rendering - HTML comment",
"url": "https://github.com/q... |
### Bug description
I would like to use "include" to generate a list with info I will use across the document.
The rendering, however, is an empty bullet.
Example:
Assume the file `warehousing_course_ilo_explain.qmd` has the content `ILO1`.
Then, the following:
```
Upon finishing the MSc Warehousing cour... | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2023-02-09T09:58:16Z",
"creator": "brenobeirigo",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "v1.4",
"number": 4291,
"state": "open",
"title": "Add error message when `{{< include >}}` is used in... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/4265
<div type='discussions-op-text'>
<sup>Originally posted by **KaiWaldrant** February 7, 2023</sup>
We are creating a website with quarto and wanted to make use of the auto generating side bar navigation. Because we want to define the orde... | {
"assignee": null,
"comments": 3,
"created_at": "2023-02-09T09:30:12Z",
"creator": "KaiWaldrant",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": null,
"number": 4290,
"state": "closed",
"title": "auto generate ordered side navigation with subfolders",
"url": "https://gith... |
On Windows
````
> quarto --version
1.3.184
> echo 'console.log("hello")' > test.js
> quarto run test.js
WARNING: Specified QUARTO_DENO does not exist, using built in deno
hello
> $ENV:QUARTO_DENO
````
See the warning but `QUARTO_DENO` is not set on the system. Something is off.
@dragonstyle I need your... | {
"assignee": "dragonstyle",
"comments": 4,
"created_at": "2023-02-08T16:03:45Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug",
"windows"
],
"locked": false,
"milestone": null,
"number": 4281,
"state": "closed",
"title": "QUARTO_DENO wrongly set internally in `quarto.e... |
### Bug description
Given this document:
```markdown
---
title: Example Title
format:
gfm:
markdown-headings: atx
---
# Heading
Here's some text.
## Heading 2
Here's some more text.
```
I receive the following output:
```markdown
Example Title
================
# Heading
... | {
"assignee": "dragonstyle",
"comments": 4,
"created_at": "2023-02-08T14:23:59Z",
"creator": "tomshafer",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4280,
"state": "closed",
"title": "Quarto does not render titles as atx-style H1s in Markdo... |
I think the CSS rules in the following lines, which are applied on website pages with the title block banned enabled, are either missing a `>` combinator or one of the `:first-of-type` should be a `:first-child` selector.
https://github.com/quarto-dev/quarto-cli/blob/0f622d36eee8b4998dbe8c17bf59abd8b229d0e1/src/reso... | {
"assignee": "dragonstyle",
"comments": 2,
"created_at": "2023-02-08T13:51:48Z",
"creator": "gadenbuie",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": "v1.3",
"number": 4279,
"state": "closed",
"title": "Website title block banner heading margin applied throughout post",
... |
It appears that when I'm publishing my Jupyter notebooks to quartopub, the OG/twitter preview image urls are wrong.
Code in jupyter/qmd:
```
{.preview-image}
```
What is rendered in html:
```html
<meta property="og:image" content="https://quartopub.com/sites/ddobr... | {
"assignee": "dragonstyle",
"comments": 2,
"created_at": "2023-02-08T13:28:48Z",
"creator": "ddobrinskiy",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": "v1.3",
"number": 4278,
"state": "closed",
"title": "Wrong URL for twitter cards/open graph",
"url": "https://github.c... |
### Bug description
If I am:
- working in RStudio Desktop 2023.03.0-daily+301
- in a .qmd file, in visual editor mode
- then take a windows screenshot, directed to the clipboard, and
- copy it into the visual editor window
Then, instead of getting the expected image of the screenshot, I get a broken link, such ... | {
"assignee": null,
"comments": 2,
"created_at": "2023-02-08T13:05:16Z",
"creator": "donboyd5",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4277,
"state": "closed",
"title": "Cannot paste Windows screenshot into qmd file, in visual editor, in ... |
### Bug description
This may also affect csl (not sure)
If you use the simple book generated by `quarto create` and then switch the bibliography to an absolute path you get the following for HTML rendering:
```bash
jjallaire@jjallairesmbp2 bookwithbib % quarto render --to html
[1/4] index.qmd
[2/4] in... | {
"assignee": "dragonstyle",
"comments": 0,
"created_at": "2023-02-08T12:57:57Z",
"creator": "jjallaire",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4276,
"state": "closed",
"title": "trouble rendering html books with bibliographies that us... |
### Bug description
The following code yields different results for Quarto versions 1.1 and 1.3.154. In 1.1 it renders fine, caption shows and cross-referencing works. In 1.3.154 neither captioning nor cross-referencing works. Moreover, the styling of the tables is very different.
---
format: html
---
``... | {
"assignee": "cscheid",
"comments": 10,
"created_at": "2023-02-08T06:29:32Z",
"creator": "snhansen",
"is_pull_request": false,
"labels": [
"bug",
"tables"
],
"locked": false,
"milestone": null,
"number": 4272,
"state": "closed",
"title": "Table caption doesn't work with gt-tables on new... |
### Bug description
After updating to 1.3.178 on Windows 10, previews of PDFs fail for my book project. See the MWE at https://github.com/fuhrmanator/quarto-test
It a git bash terminal, I usually type `quarto preview --to pdf` and it builds the PDF in `_book/book-pdf` (I think the subdir for the PDF is new?). Whe... | {
"assignee": "dragonstyle",
"comments": 3,
"created_at": "2023-02-08T05:19:18Z",
"creator": "fuhrmanator",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4271,
"state": "closed",
"title": "Quarto preview of PDF fails in Windows 1.3.178",
"ur... |
For example:
* What version of quarto to use: dev
* To build site locally:
```
quarto render
```
* How to generate reference section (based on assumptions about location of `quarto-cli`:
```
quarto run tools/reference.ts
```
* Actions that publish website (I'm not familiar with... | {
"assignee": "cwickham",
"comments": 5,
"created_at": "2023-02-08T01:07:22Z",
"creator": "cwickham",
"is_pull_request": false,
"labels": [
"documentation"
],
"locked": false,
"milestone": "v1.4",
"number": 4496,
"state": "open",
"title": "Add build instructions for quarto-web to README",
... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/4266
<div type='discussions-op-text'>
<sup>Originally posted by **michiexile** February 7, 2023</sup>
I'm writing a sequence of slides using Quarto and revealjs, and want to include an index file for my slides directory - both to be able to l... | {
"assignee": "dragonstyle",
"comments": 1,
"created_at": "2023-02-07T22:51:09Z",
"creator": "dragonstyle",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": "v1.3",
"number": 4267,
"state": "closed",
"title": "No Listing generated (listing glob issue?)",
"url": "https://gith... |
https://fluidsyndicate.com
very simple website, but using an advanced R tool for visualisation, and listing page for non-blog content.
an open source art project :) | {
"assignee": "cwickham",
"comments": 4,
"created_at": "2023-02-07T20:45:58Z",
"creator": "jcolomb",
"is_pull_request": false,
"labels": [
"documentation",
"websites"
],
"locked": false,
"milestone": null,
"number": 4506,
"state": "closed",
"title": "added another exampe to the gallery (... |
Here is the issue with traceback
````
[smoke] > quarto render docs\smoke-all\2022\09\30\custom-writer-emulation\customwriter-yaml.qmd --to customformat.lua => ./test.ts:126:72
error: AssertionError: Failed assertion:
--------------------------------------------------------------------------------
[smoke] > quar... | {
"assignee": "cderv",
"comments": 4,
"created_at": "2023-02-07T17:00:44Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": "v1.3",
"number": 4260,
"state": "closed",
"title": "Wrong figure folder built using custom format due to mutation",
"url": "https... |
This issue is here to track improvement ideas for ou tests suites
- [ ] Scheduled test on our latest build version (would help surface https://github.com/quarto-dev/quarto-cli/issues/4257 maybe)
- [ ] Testing with latest versions of R, Python and Julia packages
- [ ] Testing with dev versions of some R, Python an... | {
"assignee": null,
"comments": 1,
"created_at": "2023-02-07T15:51:01Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"enhancement"
],
"locked": false,
"milestone": "Future",
"number": 4259,
"state": "open",
"title": "Tests suite improvement ideas ",
"url": "https://github.com... |
### Bug description
It happens inconsistenlty, but sometimes when I preview a revealjs presentation, the Speaker View ("S") command doesn't work. If I type "?" for the list of keys, it's not available.
... | {
"assignee": "cderv",
"comments": 6,
"created_at": "2023-02-07T14:48:28Z",
"creator": "fuhrmanator",
"is_pull_request": false,
"labels": [
"bug",
"revealjs"
],
"locked": false,
"milestone": "v1.4",
"number": 4258,
"state": "open",
"title": "Quarto preview of revealjs sometimes doesn't h... |
This is the issue I get when using latest prerelease
````
cannot open C:\Users\chris\scoop\apps\quarto-prerelease\current\share\filters\customwriter\customwriter.lua: No such file or directory
````
`customwriter` folder is not in the `share` folder of my quarto installation.
This happens in the context of c... | {
"assignee": "dragonstyle",
"comments": 3,
"created_at": "2023-02-07T14:35:55Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4257,
"state": "closed",
"title": "customwriter.lua missing from share resource in quarto-preleas... |
Test I did based on discussion below:
* Clone project https://github.com/dmbates/plotdemo which has a `_freeze` folder and use Julia.
* Delete the `docs` folder which is the output to recreate and I don't have Julia setup on my environment.
* Rendering locally with `quarto preview` -> Julia is not needed. The f... | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2023-02-07T08:52:08Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug",
"duplicate"
],
"locked": false,
"milestone": "v1.3",
"number": 4252,
"state": "closed",
"title": "Jupyter kernel needed for publish github action... |
### Bug description
This code:
```r
library(rvest)
url <- "https://trace.tennessee.edu/utk_graddiss/index.html"
diss_html <- read_html(url)
diss <- diss_html %>% html_elements(".article-listing")
```
works without any problem in the R REPL or in Emacs ESS.
In Quarto, I get:
> Error in xml_ns.xml_doc... | {
"assignee": null,
"comments": 14,
"created_at": "2023-02-07T06:00:25Z",
"creator": "prosoitos",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4249,
"state": "closed",
"title": "Conflict between the rvest package and the knitr cache used by Qua... |
### Bug description
I'm getting a strange behaviour with `resources: project/wood/appfiles/` in my `quarto_yml` in recent pre-release versions (first noticed in 1.3.146 and persisting in 1.3.158). When I build my website, some of the files are not found per the output below even though the files are there per the scre... | {
"assignee": "dragonstyle",
"comments": 7,
"created_at": "2023-02-06T16:25:00Z",
"creator": "cgoo4",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4245,
"state": "closed",
"title": "Strange behaviour using `resources` in recent pre-releases",... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/4243
<div type='discussions-op-text'>
<sup>Originally posted by **thegilpatrick** February 6, 2023</sup>
I rendered an HTML page and uploaded it on GitHub pages. Here is the [link to the webpage](https://thegilpatrick.com/blog/tidyTuesday/2... | {
"assignee": "dragonstyle",
"comments": 0,
"created_at": "2023-02-06T14:54:01Z",
"creator": "dragonstyle",
"is_pull_request": false,
"labels": [],
"locked": false,
"milestone": "v1.3",
"number": 4244,
"state": "closed",
"title": "Interactivity of rendered HTML page not working on mobile browsers"... |
### Bug description
I rendered an HTML page and uploaded it on GitHub pages. Here is the [link to the webpage](https://thegilpatrick.com/blog/tidyTuesday/2023-01-31/Pet_Cats_UK.html).
The page loads fine, but none of the interactivity works on mobile (Safari or Chrome) (except for the show code button). I have some... | {
"assignee": null,
"comments": 0,
"created_at": "2023-02-06T14:33:39Z",
"creator": "thegilpatrick",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4242,
"state": "closed",
"title": "Rendered HTML page interactivity not working on mobile browsers... |
### Bug description
```
pandoc
to: latex
output-file: README.tex
standalone: true
pdf-engine: xelatex
variables:
graphics: true
tables: true
default-image-extension: pdf
metadata
documentclass: scrartcl
classoption:
- DIV=11
- numbers=noendperiod
papersize: letter
... | {
"assignee": "cwickham",
"comments": 9,
"created_at": "2023-02-06T10:53:54Z",
"creator": "FloraCanou",
"is_pull_request": false,
"labels": [
"documentation"
],
"locked": false,
"milestone": "Future",
"number": 4241,
"state": "open",
"title": "\"LaTeX Error: File `footnote.sty' not found\" o... |
### Bug description
Some RevealJS themes (beige, league, sky) don't support animation of code line number highlighting per https://quarto.org/docs/presentations/revealjs/#line-highlighting (see the example where one can advance with space-bar to show highlighted lines). In the faulty themes, it seems the "background" ... | {
"assignee": "cderv",
"comments": 2,
"created_at": "2023-02-05T17:34:25Z",
"creator": "fuhrmanator",
"is_pull_request": false,
"labels": [
"bug",
"revealjs"
],
"locked": false,
"milestone": "v1.4",
"number": 4233,
"state": "open",
"title": "RevealJS code block animations not working on ... |
### Bug description
I have been copying and running the same qmd file week in and week out. This week when I ran it, it printed:
::: panel tabset
:::
Instead of creating tabs it worked only as headers, but when I threw in some dummy tabs elsewhere in the document, tabs were created, ie.
::: panel tabset... | {
"assignee": null,
"comments": 12,
"created_at": "2023-02-05T10:57:50Z",
"creator": "racing-focus",
"is_pull_request": false,
"labels": [
"bug",
"needs-repro"
],
"locked": false,
"milestone": null,
"number": 4230,
"state": "closed",
"title": "Quarto - Panel Tabset",
"url": "https://gi... |
It might make sense for us to leverage cell magics to support (eg) a native `sql` cell in the same way that knitr does it.
Pros:
- it's a popular request
- it would us get closer to matching the behavior in the `knitr` engine
Cons:
- it would make it even harder for beginners to reason about what engine is res... | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2023-02-04T20:09:40Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"enhancement",
"jupyter"
],
"locked": false,
"milestone": "v1.4",
"number": 4227,
"state": "open",
"title": "SQL cell (and others?) in jupyter engine ... |
### Bug description
Compiling a qmd file to PDF doesn't work if it contains an R HTML widget. Here is a minimal reproducible example with a leaflet map (but the behavior is the same with a visNetwork graph for example) :
````md
---
format:
pdf:
prefer-html: false
---
# Leaflet test
```{r}
library(... | {
"assignee": "cderv",
"comments": 4,
"created_at": "2023-02-04T19:18:23Z",
"creator": "juba",
"is_pull_request": false,
"labels": [
"documentation"
],
"locked": false,
"milestone": "v1.4",
"number": 4225,
"state": "open",
"title": "Can't compile to PDF when including an R HTML widget",
"u... |
### Bug description
_No response_
### Checklist
- [ ] Please include a minimal, fully reproducible example in a single .qmd file? Please provide the whole file rather than the snippet you believe is causing the issue.
- [ ] Please [format your issue](https://quarto.org/bug-reports.html#formatting-make-githubs-markdo... | {
"assignee": null,
"comments": 4,
"created_at": "2023-02-04T18:40:54Z",
"creator": "mroberts1",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4224,
"state": "closed",
"title": "Other formats not posting in margin",
"url": "https://github.com/... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/4217
<div type='discussions-op-text'>
<sup>Originally posted by **aborruso** February 4, 2023</sup>
Hi,
I would like to add a paginated html simple table in a quarto HTML output.
I was thinking of using [itables](https://mwouts.github.io/it... | {
"assignee": "cscheid",
"comments": 0,
"created_at": "2023-02-04T17:35:14Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"enhancement",
"jupyter"
],
"locked": false,
"milestone": "v1.4",
"number": 4223,
"state": "open",
"title": "\"trusted notebook execution\"",
"url":... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/4220
<div type='discussions-op-text'>
<sup>Originally posted by **aborruso** February 4, 2023</sup>
Hi,
I have read the documentation, and this should work
~~~~
```{python}
#| echo: false
#| label: tbl-ref
#| tbl-cap: "Main Caption"
... | {
"assignee": "cscheid",
"comments": 1,
"created_at": "2023-02-04T17:30:59Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"bug",
"tables"
],
"locked": false,
"milestone": "v1.3",
"number": 4222,
"state": "closed",
"title": "How to render in python table caption, for html ... |
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/4216
<div type='discussions-op-text'>
<sup>Originally posted by **aborruso** February 4, 2023</sup>
Hi,
I have the below sample code.
~~~~
```{ojs}
//| echo: false
//| column: page
data = FileAttachment("input.csv").csv({ typed: true ... | {
"assignee": "cscheid",
"comments": 5,
"created_at": "2023-02-04T17:29:35Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"bug",
"ojs-engine"
],
"locked": false,
"milestone": "v1.4",
"number": 4221,
"state": "open",
"title": "Observable and article layout: is it possible ... |
### Bug description
_No response_
### Checklist
- [ ] Please include a minimal, fully reproducible example in a single .qmd file? Please provide the whole file rather than the snippet you believe is causing the issue.
- [ ] Please [format your issue](https://quarto.org/bug-reports.html#formatting-make-githubs-markdo... | {
"assignee": null,
"comments": 1,
"created_at": "2023-02-04T13:48:44Z",
"creator": "mroberts1",
"is_pull_request": false,
"labels": [
"bug",
"needs-repro"
],
"locked": false,
"milestone": null,
"number": 4218,
"state": "closed",
"title": "Other Formats links not appearing in margin",
... |
### Bug description
I'd like to ask if there are any plans to support arm64 for Linux?
Quarto not being available for arm64 currently blocks a full-fledged Posit Workbench arm64 setup.
AFAICS one blocking issue is that `deno` is not yet available for arm64? https://github.com/denoland/deno/issues/1846
### Che... | {
"assignee": "dragonstyle",
"comments": 17,
"created_at": "2023-02-04T11:47:02Z",
"creator": "pat-s",
"is_pull_request": false,
"labels": [
"bug",
"early-in-release"
],
"locked": false,
"milestone": "v1.4",
"number": 4215,
"state": "closed",
"title": "Support for arm64 arch",
"url": "... |
### Bug description
I'm testing the new code annotations feature in Quarto pre-release 1.3.154 (MacOS; RStudio IDE Version 2022.12.0+353 (2022.12.0+353)) in a Reveal JS presentation.
When using the `output-location: slide` option, the annotations appear on the output slide rather than on the slide associated with... | {
"assignee": "dragonstyle",
"comments": 0,
"created_at": "2023-02-04T01:03:59Z",
"creator": "pmagwene",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4213,
"state": "closed",
"title": "Code annotations don't work well with `output-location: s... |
### Bug description
Environment: Arch Linux
Deno: 1.30.1
RStudio vesion: irrelevant
AUR Package: quarto-cli-pre-release (I'm maintainer)
Since 1.29 Deno has dropped some API calls, in particular, `Deno.spawnSync`. As result the following error has thrown when I'm trying to build `quarto-cli-pre-release`:
```
... | {
"assignee": null,
"comments": 5,
"created_at": "2023-02-03T21:14:35Z",
"creator": "trap000d",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4212,
"state": "closed",
"title": "Won't build with Deno >=1.29 ",
"url": "https://github.com/quarto-... |
### Bug description
With quarto version 1.2.335, I tried to use `keep-yaml` to preserve the yaml frontmatter in quarto outputs. This does not work for markdown formats such as `gfm` and `commonmark`.
``` r
frontmatter <- paste0(readLines("frontmatter"), collapse = "\n")
cat(frontmatter)
#> ---
#> title: hello ... | {
"assignee": "cderv",
"comments": 14,
"created_at": "2023-02-03T19:34:34Z",
"creator": "qiushiyan",
"is_pull_request": false,
"labels": [
"documentation"
],
"locked": false,
"milestone": "v1.4",
"number": 4210,
"state": "open",
"title": "`keep-yaml` not working for markdown formats",
"url... |
### Bug description
I'm having issues rendering the shinylive example document described [here](https://github.com/quarto-ext/shinylive). I followed the instructions for installing the extension which seemed successful. However, when I try to render the following example document:
```
---
title: Shinylive in Quarto... | {
"assignee": null,
"comments": 1,
"created_at": "2023-02-03T17:17:11Z",
"creator": "snhansen",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4207,
"state": "closed",
"title": "Error rendering document with the shinylive extension",
"url": "ht... |
### Bug description
Currently when an `error` is rendered in the output, the ascii escape codes are also printed out
This is what it looks like in the terminal:
![image](https://user-images.githubuse... | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2023-02-03T13:01:45Z",
"creator": "kdheepak",
"is_pull_request": false,
"labels": [
"bug",
"julia",
"triaged-to"
],
"locked": false,
"milestone": "v1.4",
"number": 4204,
"state": "open",
"title": "When an error is rendered in the... |
### Bug description
I'm getting an error when trying to install the `parse-latex` extension available [here](https://github.com/tarleb/parse-latex).
Here is the error message from running `quarto install extension tarleb/parse-latex`:
```
Quarto extensions may execute code when documents are rendered. If you do n... | {
"assignee": "cderv",
"comments": 16,
"created_at": "2023-02-03T12:57:07Z",
"creator": "snhansen",
"is_pull_request": false,
"labels": [
"bug",
"windows"
],
"locked": false,
"milestone": "v1.3",
"number": 4203,
"state": "closed",
"title": "Error installing Quarto extension",
"url": "h... |
### Bug description
[`code-filename`](https://quarto.org/docs/output-formats/html-code.html#code-filename) is not working for latest pre-release [version 1.3.151](https://quarto.org/docs/download/prerelease.html) for pdf output format but works for html format. But `code-filename` was working for both formats in previ... | {
"assignee": "cscheid",
"comments": 2,
"created_at": "2023-02-03T11:18:11Z",
"creator": "shafayetShafee",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4200,
"state": "closed",
"title": "code filename is not working for pre-release Quarto ver... |
Some part of v8's startup process mmaps an 8GB chunk of memory. We need to allow users to configure that. | {
"assignee": "cscheid",
"comments": 7,
"created_at": "2023-02-03T00:51:49Z",
"creator": "cscheid",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.4",
"number": 4197,
"state": "open",
"title": "limited environments run into deno memory issues",
"url": "htt... |
### Bug description
Code annotations disable the "copy code" button.
````
---
format: html
---
Code without annotation - has code copy button on hover:
```r
1 + 1
```
Code with annotation - no code copy button:
```r
1 + 1 # <1>
```
1. Arithmetic
````
I think it makes sense for the copy to exclud... | {
"assignee": "dragonstyle",
"comments": 2,
"created_at": "2023-02-02T19:53:08Z",
"creator": "cwickham",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.3",
"number": 4196,
"state": "closed",
"title": "Code annotation disables copy code button",
"url": "htt... |
### Bug description
From #3847, it seems like it should be possible to use fenced divs to indicate that a section of Markdown in .qmd should be converted into two separate Markdown cells in Jupyter, but this does not seem to be the case.
Tested on Quarto v1.2.335, on both Arch Linux and Ubuntu 22.04.
Here is a s... | {
"assignee": null,
"comments": 6,
"created_at": "2023-02-02T19:21:33Z",
"creator": "syclops",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4195,
"state": "closed",
"title": "Cannot generate separate Markdown cells in Jupyter",
"url": "https:... |
Test error
````
[smoke] > quarto render docs\project\site -o - => ./test.ts:121:72
error: AssertionError: Failed assertion:
--------------------------------------------------------------------------------
[smoke] > quarto render docs\project\site -o -
run-tests.psl ..\..\..\..\..\..\C:\Users\chris\... | {
"assignee": "cscheid",
"comments": 4,
"created_at": "2023-02-02T18:15:57Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": "v1.4",
"number": 4194,
"state": "open",
"title": "Removing empty dir is not working as wrong path is created (when o... |
Opening this to think about it further. See discussion
### Discussed in https://github.com/quarto-dev/quarto-cli/discussions/4182
<div type='discussions-op-text'>
<sup>Originally posted by **sagikazarmark** February 1, 2023</sup>
I want to include a certain piece of CSS in all of my slides (regardless of th... | {
"assignee": "cderv",
"comments": 4,
"created_at": "2023-02-02T17:28:53Z",
"creator": "cderv",
"is_pull_request": false,
"labels": [
"enhancement",
"revealjs"
],
"locked": false,
"milestone": "v1.4",
"number": 4193,
"state": "open",
"title": "[revealjs] Global custom theme configuration... |
### Bug description
TLDR: When using a custom Julia system image in a project, the first format renders fine, but subsequent try to use a different kernel w/o the system image. This works locally but not in CI. I *think* it may be due to daemon handling without TTY.
I have a project using Julia with a custom system... | {
"assignee": null,
"comments": 2,
"created_at": "2023-02-02T17:11:45Z",
"creator": "agerlach",
"is_pull_request": false,
"labels": [
"bug",
"needs-repro"
],
"locked": false,
"milestone": null,
"number": 4192,
"state": "closed",
"title": "Projects w/ multiple output formats uses differen... |
### Bug description
Speaker notes print in pdf output. They are appropriately hidden in html output. This illustrates the issue:
````
---
title: Test
format: pdf
---
# A section head
Some text
::: {.notes}
Hidden speaker notes
:::
````
Attached are a qmd file and output:
[quarto-issue-speaker-note... | {
"assignee": null,
"comments": 1,
"created_at": "2023-02-02T03:35:45Z",
"creator": "rmcd1024",
"is_pull_request": false,
"labels": [
"bug"
],
"locked": false,
"milestone": null,
"number": 4189,
"state": "closed",
"title": "Speaker notes are printed in pdf output",
"url": "https://github.c... |
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