| Unnamed: 0,Gene.Symbol,Ranking,Annotation...reasoning,Additional.note |
| 1,FSTL4,1-50,More distinct marker than L5,markers ranked with cohen mean |
| 2,SATB2,1-50,abundant marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean |
| 3,KCNIP4,1-50,abundant marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean |
| 4,TAFA1,1-50,abundant marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 5,VAT1L,1-50,abundant marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 6,CBLN2,1-50,abundant marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 7,ARPP21,1-50,abundant marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean |
| 8,RAD52,1-50,abundant marker for astrocyte of the cerebral cortex,markers ranked with cohen mean |
| 9,PDK4,1-50,abundant marker for astrocyte of the cerebral cortex,markers ranked with cohen mean |
| 10,SEMA3B,1-50,abundant marker for astrocyte of the cerebral cortex,markers ranked with cohen mean |
| 11,ADARB2,1-50,abundant marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean |
| 12,SORCS3,1-50,abundant marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean |
| 13,CXCL14,1-50,abundant marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean |
| 14,MAD1L1,1-50,abundant marker for cerebral cortex endothelial cell,markers ranked with cohen mean |
| 15,CYP26B1,1-50,abundant marker for cerebral cortex endothelial cell,markers ranked with cohen mean |
| 16,CASP10,1-50,abundant marker for cerebral cortex endothelial cell,markers ranked with cohen mean |
| 17,ZNF536,1-50,abundant marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 18,ZNF385D,1-50,abundant marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 19,THSD7A,1-50,abundant marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 20,SEMA3E,1-50,abundant marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 21,EGFEM1P,1-50,abundant marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 22,LAMP5,1-50,abundant marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean |
| 23,FGF13,1-50,abundant marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean |
| 24,C1orf112,1-50,abundant marker for microglial cell,markers ranked with cohen mean |
| 25,CEACAM21,1-50,abundant marker for microglial cell,markers ranked with cohen mean |
| 26,TYROBP,1-50,abundant marker for microglial cell,markers ranked with cohen mean |
| 27,TSHZ2,1-50,abundant marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 28,HTR2C,1-50,abundant marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 29,GCFC2,1-50,abundant marker for oligodendrocyte,markers ranked with cohen mean |
| 30,LAMP2,1-50,abundant marker for oligodendrocyte,markers ranked with cohen mean |
| 31,TMEM98,1-50,abundant marker for oligodendrocyte,markers ranked with cohen mean |
| 32,HECW1,1-50,abundant marker for oligodendrocyte precursor cell,markers ranked with cohen mean |
| 33,KLHL13,1-50,abundant marker for oligodendrocyte precursor cell,markers ranked with cohen mean |
| 34,ATP1A2,1-50,abundant marker for oligodendrocyte precursor cell,markers ranked with cohen mean |
| 35,ABTB3,1-50,abundant marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 36,GCLC,1-50,abundant marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean |
| 37,HCCS,1-50,abundant marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean |
| 38,DPEP1,1-50,abundant marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean |
| 39,SST,1-50,abundant marker for sst GABAergic cortical interneuron,markers ranked with cohen mean |
| 40,GRIK1,1-50,abundant marker for sst GABAergic cortical interneuron,markers ranked with cohen mean |
| 41,SYNPR,1-50,abundant marker for sst GABAergic cortical interneuron,markers ranked with cohen mean |
| 42,ATP1A2,1-50,abundant marker for vascular leptomeningeal cell,markers ranked with cohen mean |
| 43,EBF1,1-50,abundant marker for vascular leptomeningeal cell,markers ranked with cohen mean |
| 44,PDGFRB,1-50,abundant marker for vascular leptomeningeal cell,markers ranked with cohen mean |
| 45,VIP,1-50,abundant marker for vip GABAergic cortical interneuron,markers ranked with cohen mean |
| 46,GALNTL6,1-50,abundant marker for vip GABAergic cortical interneuron,markers ranked with cohen mean |
| 47,CX3CR1,1-50,abundant marker for microglial cell,Known Marker |
| 48,DLGAP2,50-100,Less specific marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean |
| 49,STXBP5L,50-100,Less specific marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean |
| 50,CHRM3,50-100,Less specific marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean |
| 51,NRGN,50-100,Less specific marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 52,PDE1A,50-100,Less specific marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 53,RALYL,50-100,Less specific marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean |
| 54,PTPRR,50-100,Less specific marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean |
| 55,MARCHF1,50-100,Less specific marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean |
| 56,NKX2-2,50-100,Less specific marker for astrocyte of the cerebral cortex,markers ranked with cohen mean |
| 57,OBI1-AS1,50-100,Less specific marker for astrocyte of the cerebral cortex,markers ranked with cohen mean |
| 58,CRACD,50-100,Less specific marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean |
| 59,MYO16,50-100,Less specific marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean |
| 60,CACNA1B,50-100,Less specific marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean |
| 61,ID3,50-100,Less specific marker for cerebral cortex endothelial cell,markers ranked with cohen mean |
| 62,TBX3,50-100,Less specific marker for cerebral cortex endothelial cell,markers ranked with cohen mean |
| 63,PLXND1,50-100,Less specific marker for cerebral cortex endothelial cell,markers ranked with cohen mean |
| 64,TMEM132D,50-100,Less specific marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 65,TENM1,50-100,Less specific marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 66,SDK1,50-100,Less specific marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 67,CLSTN2,50-100,Less specific marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 68,RYR2,50-100,Less specific marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 69,NRG1,50-100,Less specific marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 70,NYAP2,50-100,Less specific marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean |
| 71,MTUS2,50-100,Less specific marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean |
| 72,LINC00299,50-100,Less specific marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean |
| 73,APBB1IP,50-100,Less specific marker for microglial cell,markers ranked with cohen mean |
| 74,SH3BP2,50-100,Less specific marker for microglial cell,markers ranked with cohen mean |
| 75,C1QC,50-100,Less specific marker for microglial cell,markers ranked with cohen mean |
| 76,FOXP2,50-100,Less specific marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 77,CHN2,50-100,Less specific marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 78,MED24,50-100,Less specific marker for oligodendrocyte,markers ranked with cohen mean |
| 79,DAPK2,50-100,Less specific marker for oligodendrocyte,markers ranked with cohen mean |
| 80,BCAS1,50-100,Less specific marker for oligodendrocyte,markers ranked with cohen mean |
| 81,CTNS,50-100,Less specific marker for oligodendrocyte precursor cell,markers ranked with cohen mean |
| 82,BCAS1,50-100,Less specific marker for oligodendrocyte precursor cell,markers ranked with cohen mean |
| 83,SOX6,50-100,Less specific marker for oligodendrocyte precursor cell,markers ranked with cohen mean |
| 84,ADAMTS17,50-100,Less specific marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 85,FGF12,50-100,Less specific marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 86,GRIP1,50-100,Less specific marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 87,KMO,50-100,Less specific marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean |
| 88,KCNK17,50-100,Less specific marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean |
| 89,STXBP6,50-100,Less specific marker for sst GABAergic cortical interneuron,markers ranked with cohen mean |
| 90,CDH9,50-100,Less specific marker for sst GABAergic cortical interneuron,markers ranked with cohen mean |
| 91,ELAVL2,50-100,Less specific marker for sst GABAergic cortical interneuron,markers ranked with cohen mean |
| 92,UTRN,50-100,Less specific marker for vascular leptomeningeal cell,markers ranked with cohen mean |
| 93,CALD1,50-100,Less specific marker for vascular leptomeningeal cell,markers ranked with cohen mean |
| 94,LAMA2,50-100,Less specific marker for vascular leptomeningeal cell,markers ranked with cohen mean |
| 95,GALNT13,50-100,Less specific marker for vip GABAergic cortical interneuron,markers ranked with cohen mean |
| 96,SNTG1,50-100,Less specific marker for vip GABAergic cortical interneuron,markers ranked with cohen mean |
| 97,LINC01480,100-150,de-enriched marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean |
| 98,AIF1,100-150,de-enriched marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean |
| 99,MGC16275,100-150,de-enriched marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 100,SALL3,100-150,de-enriched marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 101,FMO6P,100-150,de-enriched marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 102,GPRC5B,100-150,de-enriched marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean |
| 103,SEMA6A,100-150,de-enriched marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean |
| 104,CAPN2,100-150,de-enriched marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean |
| 105,IL1RAPL1,100-150,de-enriched marker for astrocyte of the cerebral cortex,markers ranked with cohen mean |
| 106,DSCAM,100-150,de-enriched marker for astrocyte of the cerebral cortex,markers ranked with cohen mean |
| 107,PPP1R13L,100-150,de-enriched marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean |
| 108,INPPL1,100-150,de-enriched marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean |
| 109,EXPH5,100-150,de-enriched marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean |
| 110,NCAM1,100-150,de-enriched marker for cerebral cortex endothelial cell,markers ranked with cohen mean |
| 111,GABRG3,100-150,de-enriched marker for cerebral cortex endothelial cell,markers ranked with cohen mean |
| 112,VRK2,100-150,de-enriched marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 113,TRPM3,100-150,de-enriched marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 114,CSGALNACT1,100-150,de-enriched marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 115,RND3,100-150,de-enriched marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 116,NOTCH2NLA,100-150,de-enriched marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 117,EGFR,100-150,de-enriched marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 118,DKKL1,100-150,de-enriched marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean |
| 119,TNFSF10,100-150,de-enriched marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean |
| 120,TRIB1,100-150,de-enriched marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean |
| 121,DOK6,100-150,de-enriched marker for microglial cell,markers ranked with cohen mean |
| 122,METTL6,100-150,de-enriched marker for microglial cell,markers ranked with cohen mean |
| 123,TRIM16,100-150,de-enriched marker for microglial cell,markers ranked with cohen mean |
| 124,HMOX1,100-150,de-enriched marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 125,ETS1,100-150,de-enriched marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 126,HERC2P4,100-150,de-enriched marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean |
| 127,MYO1F,100-150,de-enriched marker for oligodendrocyte,markers ranked with cohen mean |
| 128,GASK1B,100-150,de-enriched marker for oligodendrocyte,markers ranked with cohen mean |
| 129,RTCB,100-150,de-enriched marker for oligodendrocyte,markers ranked with cohen mean |
| 130,RBFOX3,100-150,de-enriched marker for oligodendrocyte precursor cell,markers ranked with cohen mean |
| 131,TMEM119,100-150,de-enriched marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 132,CAVIN2,100-150,de-enriched marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean |
| 133,GBGT1,100-150,de-enriched marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean |
| 134,IL6ST,100-150,de-enriched marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean |
| 135,SFMBT2,100-150,de-enriched marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean |
| 136,HS3ST6,100-150,de-enriched marker for sst GABAergic cortical interneuron,markers ranked with cohen mean |
| 137,EPHA2,100-150,de-enriched marker for sst GABAergic cortical interneuron,markers ranked with cohen mean |
| 138,CHST3,100-150,de-enriched marker for sst GABAergic cortical interneuron,markers ranked with cohen mean |
| 139,CNIH3,100-150,de-enriched marker for vascular leptomeningeal cell,markers ranked with cohen mean |
| 140,AGTPBP1,100-150,de-enriched marker for vascular leptomeningeal cell,markers ranked with cohen mean |
| 141,AFDN,100-150,de-enriched marker for vascular leptomeningeal cell,markers ranked with cohen mean |
| 142,MOBP,100-150,de-enriched marker for vip GABAergic cortical interneuron,markers ranked with cohen mean |
| 143,LINC01094,100-150,de-enriched marker for vip GABAergic cortical interneuron,markers ranked with cohen mean |
| 144,SAMD9L,100-150,de-enriched marker for vip GABAergic cortical interneuron,markers ranked with cohen mean |
| 145,ALDH1L1,1-50,known marker gene for astrocyte of the cerebral cortex,sourced from prior knowledge |
| 146,MBP,50-100,known marker gene for oligodendrocyte,sourced from prior knowledge |
| 147,GFAP,50-100,known marker gene for astrocyte,sourced from prior knowledge |
| 148,AQP4,1-50,known marker gene for astrocyte,sourced from prior knowledge |
| 149,PVALB,50-100,spcific marker for pvalb interneurons,sourced from prior knowledge |
| 150,SST,1-50,known marker gene SST interneurons,sourced from prior knowledge |
|
|
