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hectorastrom
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test-worm-preprocess-standard

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neural activity

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train · ~42.8k rows (showing the first 42.8k)

source_dataset stringclasses 12 values	raw_data_file stringclasses 792 values	worm stringclasses 577 values	neuron stringclasses 358 values	slot int32 0 299	is_labeled_neuron bool 2 classes	is_unlabeled_neuron bool 2 classes	original_calcium_data sequencelengths 661 5.85k	calcium_data sequencelengths 693 8.78k	original_smooth_calcium_data sequencelengths 661 5.85k	smooth_calcium_data sequencelengths 693 8.78k	original_residual_calcium sequencelengths 661 5.85k	residual_calcium sequencelengths 693 8.78k	original_smooth_residual_calcium sequencelengths 661 5.85k	smooth_residual_calcium sequencelengths 693 8.78k	smooth_method stringclasses 1 value	interpolate_method stringclasses 1 value	original_time_in_seconds sequencelengths 661 5.85k	time_in_seconds sequencelengths 693 8.78k	original_dt sequencelengths 661 5.85k	dt sequencelengths 693 8.78k	original_median_dt float32 0.2 0.64	median_dt float32 0.33 0.33	original_max_timesteps int32 661 5.85k	max_timesteps int32 693 8.78k
Kato2015	opensource_neural_data/Kato2015/WT_Stim.mat	worm0	AFDL	8	true	false	[2.955078125,2.96875,2.9375,2.486328125,2.7109375,2.634765625,1.9833984375,2.798828125,3.1796875,3.1(...TRUNCATED)	[2.9609375,2.955078125,2.732421875,2.59375,2.673828125,2.3046875,2.41015625,3.00390625,3.166015625,3(...TRUNCATED)	[2.955078125,2.96875,2.9375,2.486328125,2.7109375,2.634765625,1.9833984375,2.798828125,3.1796875,3.1(...TRUNCATED)	[2.9609375,2.955078125,2.732421875,2.59375,2.673828125,2.3046875,2.41015625,3.00390625,3.166015625,3(...TRUNCATED)	[0.040191650390625,-0.0272979736328125,-0.73681640625,-0.344970703125,0.2255859375,-1.111328125,0.25(...TRUNCATED)	[0.0116119384765625,-0.339599609375,-0.5576171875,-0.07489013671875,-0.429443359375,-0.421630859375,(...TRUNCATED)	[0.040191650390625,-0.0272979736328125,-0.73681640625,-0.344970703125,0.2255859375,-1.111328125,0.25(...TRUNCATED)	[0.0116119384765625,-0.339599609375,-0.5576171875,-0.07489013671875,-0.429443359375,-0.421630859375,(...TRUNCATED)	none	linear	[0.0,0.32763671875,0.6552734375,0.98291015625,1.310546875,1.6376953125,1.9658203125,2.29296875,2.621(...TRUNCATED)	[0.0,0.3330078125,0.666015625,0.9990234375,1.33203125,1.6650390625,1.998046875,2.330078125,2.6640625(...TRUNCATED)	[0.0,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.327636718(...TRUNCATED)	[0.0,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.33(...TRUNCATED)	0.327576	0.333	2,198	2,161
Kato2015	opensource_neural_data/Kato2015/WT_Stim.mat	worm0	AIBL	12	true	false	[4.359375,3.609375,3.1484375,2.771484375,2.48828125,2.123046875,1.9501953125,1.88671875,1.8193359375(...TRUNCATED)	[4.04296875,3.40625,2.9765625,2.63671875,2.30859375,2.03515625,1.9169921875,1.8505859375,1.75390625,(...TRUNCATED)	[4.359375,3.609375,3.1484375,2.771484375,2.48828125,2.123046875,1.9501953125,1.88671875,1.8193359375(...TRUNCATED)	[4.04296875,3.40625,2.9765625,2.63671875,2.30859375,2.03515625,1.9169921875,1.8505859375,1.75390625,(...TRUNCATED)	[-2.287109375,-1.8466796875,-1.28125,-1.0078125,-0.98974609375,-0.822265625,-0.360107421875,-0.19873(...TRUNCATED)	[-2.099609375,-1.59765625,-1.15625,-0.9990234375,-0.90771484375,-0.58837890625,-0.275634765625,-0.24(...TRUNCATED)	[-2.287109375,-1.8466796875,-1.28125,-1.0078125,-0.98974609375,-0.822265625,-0.360107421875,-0.19873(...TRUNCATED)	[-2.099609375,-1.59765625,-1.15625,-0.9990234375,-0.90771484375,-0.58837890625,-0.275634765625,-0.24(...TRUNCATED)	none	linear	[0.0,0.32763671875,0.6552734375,0.98291015625,1.310546875,1.6376953125,1.9658203125,2.29296875,2.621(...TRUNCATED)	[0.0,0.3330078125,0.666015625,0.9990234375,1.33203125,1.6650390625,1.998046875,2.330078125,2.6640625(...TRUNCATED)	[0.0,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.327636718(...TRUNCATED)	[0.0,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.33(...TRUNCATED)	0.327576	0.333	2,198	2,161
Kato2015	opensource_neural_data/Kato2015/WT_Stim.mat	worm0	AIBR	13	true	false	[4.53125,4.3671875,3.697265625,3.37109375,3.021484375,2.619140625,2.671875,2.55078125,2.46484375,2.6(...TRUNCATED)	[4.4609375,4.0703125,3.548828125,3.205078125,2.82421875,2.646484375,2.609375,2.50390625,2.568359375,(...TRUNCATED)	[4.53125,4.3671875,3.697265625,3.37109375,3.021484375,2.619140625,2.671875,2.55078125,2.46484375,2.6(...TRUNCATED)	[4.4609375,4.0703125,3.548828125,3.205078125,2.82421875,2.646484375,2.609375,2.50390625,2.568359375,(...TRUNCATED)	[-0.50634765625,-1.275390625,-1.51953125,-1.03125,-1.1474609375,-0.5322265625,-0.1046142578125,-0.31(...TRUNCATED)	[-0.83203125,-1.3828125,-1.296875,-1.0859375,-0.84619140625,-0.315673828125,-0.21630859375,-0.064514(...TRUNCATED)	[-0.50634765625,-1.275390625,-1.51953125,-1.03125,-1.1474609375,-0.5322265625,-0.1046142578125,-0.31(...TRUNCATED)	[-0.83203125,-1.3828125,-1.296875,-1.0859375,-0.84619140625,-0.315673828125,-0.21630859375,-0.064514(...TRUNCATED)	none	linear	[0.0,0.32763671875,0.6552734375,0.98291015625,1.310546875,1.6376953125,1.9658203125,2.29296875,2.621(...TRUNCATED)	[0.0,0.3330078125,0.666015625,0.9990234375,1.33203125,1.6650390625,1.998046875,2.330078125,2.6640625(...TRUNCATED)	[0.0,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.327636718(...TRUNCATED)	[0.0,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.33(...TRUNCATED)	0.327576	0.333	2,198	2,161
Kato2015	opensource_neural_data/Kato2015/WT_Stim.mat	worm0	ALA	22	true	false	[10.3515625,9.25,8.7265625,8.1953125,8.09375,7.4765625,7.1640625,6.4296875,6.05859375,5.4609375,5.32(...TRUNCATED)	[9.8828125,9.0234375,8.484375,8.1484375,7.79296875,7.3203125,6.78125,6.23046875,5.7265625,5.3828125,(...TRUNCATED)	[10.3515625,9.25,8.7265625,8.1953125,8.09375,7.4765625,7.1640625,6.4296875,6.05859375,5.4609375,5.32(...TRUNCATED)	[9.8828125,9.0234375,8.484375,8.1484375,7.79296875,7.3203125,6.78125,6.23046875,5.7265625,5.3828125,(...TRUNCATED)	[-3.3515625,-2.4765625,-1.6103515625,-0.96044921875,-1.1005859375,-1.421875,-1.595703125,-1.69042968(...TRUNCATED)	[-2.982421875,-2.095703125,-1.3134765625,-1.02734375,-1.2578125,-1.509765625,-1.6455078125,-1.577148(...TRUNCATED)	[-3.3515625,-2.4765625,-1.6103515625,-0.96044921875,-1.1005859375,-1.421875,-1.595703125,-1.69042968(...TRUNCATED)	[-2.982421875,-2.095703125,-1.3134765625,-1.02734375,-1.2578125,-1.509765625,-1.6455078125,-1.577148(...TRUNCATED)	none	linear	[0.0,0.32763671875,0.6552734375,0.98291015625,1.310546875,1.6376953125,1.9658203125,2.29296875,2.621(...TRUNCATED)	[0.0,0.3330078125,0.666015625,0.9990234375,1.33203125,1.6650390625,1.998046875,2.330078125,2.6640625(...TRUNCATED)	[0.0,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.327636718(...TRUNCATED)	[0.0,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.33(...TRUNCATED)	0.327576	0.333	2,198	2,161
Kato2015	opensource_neural_data/Kato2015/WT_Stim.mat	worm0	ASKL	49	true	false	[3.244140625,3.49609375,4.19140625,4.3828125,3.962890625,3.6484375,2.87109375,3.857421875,3.34765625(...TRUNCATED)	[3.3515625,3.80078125,4.27734375,4.18359375,3.80859375,3.255859375,3.38671875,3.58203125,3.794921875(...TRUNCATED)	[3.244140625,3.49609375,4.19140625,4.3828125,3.962890625,3.6484375,2.87109375,3.857421875,3.34765625(...TRUNCATED)	[3.3515625,3.80078125,4.27734375,4.18359375,3.80859375,3.255859375,3.38671875,3.58203125,3.794921875(...TRUNCATED)	[0.7646484375,1.4443359375,1.3525390625,-0.347900390625,-1.1171875,-1.666015625,0.31787109375,0.7260(...TRUNCATED)	[1.052734375,1.4033203125,0.57568359375,-0.71240234375,-1.3857421875,-0.6611328125,0.53125,0.5761718(...TRUNCATED)	[0.7646484375,1.4443359375,1.3525390625,-0.347900390625,-1.1171875,-1.666015625,0.31787109375,0.7260(...TRUNCATED)	[1.052734375,1.4033203125,0.57568359375,-0.71240234375,-1.3857421875,-0.6611328125,0.53125,0.5761718(...TRUNCATED)	none	linear	[0.0,0.32763671875,0.6552734375,0.98291015625,1.310546875,1.6376953125,1.9658203125,2.29296875,2.621(...TRUNCATED)	[0.0,0.3330078125,0.666015625,0.9990234375,1.33203125,1.6650390625,1.998046875,2.330078125,2.6640625(...TRUNCATED)	[0.0,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.327636718(...TRUNCATED)	[0.0,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.33(...TRUNCATED)	0.327576	0.333	2,198	2,161
Kato2015	opensource_neural_data/Kato2015/WT_Stim.mat	worm0	ASKR	50	true	false	[7.40234375,6.671875,6.0703125,5.58984375,5.26171875,4.3828125,4.4453125,4.2109375,4.37890625,4.2187(...TRUNCATED)	[7.09375,6.40625,5.8515625,5.4375,4.83203125,4.4140625,4.32421875,4.30078125,4.2890625,4.234375,4.13(...TRUNCATED)	[7.40234375,6.671875,6.0703125,5.58984375,5.26171875,4.3828125,4.4453125,4.2109375,4.37890625,4.2187(...TRUNCATED)	[7.09375,6.40625,5.8515625,5.4375,4.83203125,4.4140625,4.32421875,4.30078125,4.2890625,4.234375,4.13(...TRUNCATED)	[-2.224609375,-2.033203125,-1.650390625,-1.2294921875,-1.84765625,-1.24609375,-0.25732421875,-0.1069(...TRUNCATED)	[-2.14453125,-1.8642578125,-1.4580078125,-1.5224609375,-1.552734375,-0.7451171875,-0.1785888671875,-(...TRUNCATED)	[-2.224609375,-2.033203125,-1.650390625,-1.2294921875,-1.84765625,-1.24609375,-0.25732421875,-0.1069(...TRUNCATED)	[-2.14453125,-1.8642578125,-1.4580078125,-1.5224609375,-1.552734375,-0.7451171875,-0.1785888671875,-(...TRUNCATED)	none	linear	[0.0,0.32763671875,0.6552734375,0.98291015625,1.310546875,1.6376953125,1.9658203125,2.29296875,2.621(...TRUNCATED)	[0.0,0.3330078125,0.666015625,0.9990234375,1.33203125,1.6650390625,1.998046875,2.330078125,2.6640625(...TRUNCATED)	[0.0,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.327636718(...TRUNCATED)	[0.0,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.33(...TRUNCATED)	0.327576	0.333	2,198	2,161
Kato2015	opensource_neural_data/Kato2015/WT_Stim.mat	worm0	AVAL	53	true	false	[1.744140625,1.341796875,0.978515625,0.763671875,0.50830078125,0.3359375,0.0628662109375,-0.05822753(...TRUNCATED)	[1.57421875,1.181640625,0.88037109375,0.64306640625,0.423828125,0.1976318359375,-0.00047016143798828(...TRUNCATED)	[1.744140625,1.341796875,0.978515625,0.763671875,0.50830078125,0.3359375,0.0628662109375,-0.05822753(...TRUNCATED)	[1.57421875,1.181640625,0.88037109375,0.64306640625,0.423828125,0.1976318359375,-0.00047016143798828(...TRUNCATED)	[-1.23046875,-1.1689453125,-0.8818359375,-0.7177734375,-0.6533203125,-0.6796875,-0.6015625,-0.338134(...TRUNCATED)	[-1.2041015625,-1.04296875,-0.80712890625,-0.68701171875,-0.666015625,-0.64013671875,-0.4638671875,-(...TRUNCATED)	[-1.23046875,-1.1689453125,-0.8818359375,-0.7177734375,-0.6533203125,-0.6796875,-0.6015625,-0.338134(...TRUNCATED)	[-1.2041015625,-1.04296875,-0.80712890625,-0.68701171875,-0.666015625,-0.64013671875,-0.4638671875,-(...TRUNCATED)	none	linear	[0.0,0.32763671875,0.6552734375,0.98291015625,1.310546875,1.6376953125,1.9658203125,2.29296875,2.621(...TRUNCATED)	[0.0,0.3330078125,0.666015625,0.9990234375,1.33203125,1.6650390625,1.998046875,2.330078125,2.6640625(...TRUNCATED)	[0.0,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.327636718(...TRUNCATED)	[0.0,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.33(...TRUNCATED)	0.327576	0.333	2,198	2,161
Kato2015	opensource_neural_data/Kato2015/WT_Stim.mat	worm0	AVAR	54	true	false	[2.265625,1.734375,1.3291015625,1.1220703125,0.857421875,0.68359375,0.3701171875,0.40087890625,0.404(...TRUNCATED)	[2.041015625,1.5556640625,1.234375,0.9970703125,0.7724609375,0.52490234375,0.38623046875,0.402832031(...TRUNCATED)	[2.265625,1.734375,1.3291015625,1.1220703125,0.857421875,0.68359375,0.3701171875,0.40087890625,0.404(...TRUNCATED)	[2.041015625,1.5556640625,1.234375,0.9970703125,0.7724609375,0.52490234375,0.38623046875,0.402832031(...TRUNCATED)	[-1.623046875,-1.4296875,-0.93359375,-0.7197265625,-0.669921875,-0.744140625,-0.431640625,0.05224609(...TRUNCATED)	[-1.541015625,-1.2119140625,-0.8359375,-0.69580078125,-0.7060546875,-0.5859375,-0.1785888671875,0.04(...TRUNCATED)	[-1.623046875,-1.4296875,-0.93359375,-0.7197265625,-0.669921875,-0.744140625,-0.431640625,0.05224609(...TRUNCATED)	[-1.541015625,-1.2119140625,-0.8359375,-0.69580078125,-0.7060546875,-0.5859375,-0.1785888671875,0.04(...TRUNCATED)	none	linear	[0.0,0.32763671875,0.6552734375,0.98291015625,1.310546875,1.6376953125,1.9658203125,2.29296875,2.621(...TRUNCATED)	[0.0,0.3330078125,0.666015625,0.9990234375,1.33203125,1.6650390625,1.998046875,2.330078125,2.6640625(...TRUNCATED)	[0.0,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.327636718(...TRUNCATED)	[0.0,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.33(...TRUNCATED)	0.327576	0.333	2,198	2,161
Kato2015	opensource_neural_data/Kato2015/WT_Stim.mat	worm0	AVBL	55	true	false	[1.0078125,1.763671875,1.462890625,1.669921875,1.59765625,1.763671875,1.2763671875,1.171875,1.064453(...TRUNCATED)	[1.328125,1.630859375,1.5576171875,1.6357421875,1.6787109375,1.5166015625,1.2216796875,1.11328125,1.(...TRUNCATED)	[1.0078125,1.763671875,1.462890625,1.669921875,1.59765625,1.763671875,1.2763671875,1.171875,1.064453(...TRUNCATED)	[1.328125,1.630859375,1.5576171875,1.6357421875,1.6787109375,1.5166015625,1.2216796875,1.11328125,1.(...TRUNCATED)	[2.3046875,0.6943359375,-0.142822265625,0.205078125,0.142822265625,-0.489990234375,-0.90234375,-0.32(...TRUNCATED)	[1.623046875,0.325927734375,0.01605224609375,0.1756591796875,-0.1671142578125,-0.69873046875,-0.6000(...TRUNCATED)	[2.3046875,0.6943359375,-0.142822265625,0.205078125,0.142822265625,-0.489990234375,-0.90234375,-0.32(...TRUNCATED)	[1.623046875,0.325927734375,0.01605224609375,0.1756591796875,-0.1671142578125,-0.69873046875,-0.6000(...TRUNCATED)	none	linear	[0.0,0.32763671875,0.6552734375,0.98291015625,1.310546875,1.6376953125,1.9658203125,2.29296875,2.621(...TRUNCATED)	[0.0,0.3330078125,0.666015625,0.9990234375,1.33203125,1.6650390625,1.998046875,2.330078125,2.6640625(...TRUNCATED)	[0.0,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.327636718(...TRUNCATED)	[0.0,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.33(...TRUNCATED)	0.327576	0.333	2,198	2,161
Kato2015	opensource_neural_data/Kato2015/WT_Stim.mat	worm0	AVBR	56	true	false	[2.287109375,2.03125,2.443359375,2.078125,2.560546875,2.150390625,2.244140625,2.55078125,3.26953125,(...TRUNCATED)	[2.177734375,2.212890625,2.27734375,2.306640625,2.359375,2.197265625,2.404296875,2.939453125,2.66601(...TRUNCATED)	[2.287109375,2.03125,2.443359375,2.078125,2.560546875,2.150390625,2.244140625,2.55078125,3.26953125,(...TRUNCATED)	[2.177734375,2.212890625,2.27734375,2.306640625,2.359375,2.197265625,2.404296875,2.939453125,2.66601(...TRUNCATED)	[-0.77978515625,0.24072265625,0.072998046875,0.1763916015625,0.109130859375,-0.482666015625,0.612304(...TRUNCATED)	[-0.347412109375,0.1668701171875,0.1202392578125,0.14453125,-0.1807861328125,0.07183837890625,1.1113(...TRUNCATED)	[-0.77978515625,0.24072265625,0.072998046875,0.1763916015625,0.109130859375,-0.482666015625,0.612304(...TRUNCATED)	[-0.347412109375,0.1668701171875,0.1202392578125,0.14453125,-0.1807861328125,0.07183837890625,1.1113(...TRUNCATED)	none	linear	[0.0,0.32763671875,0.6552734375,0.98291015625,1.310546875,1.6376953125,1.9658203125,2.29296875,2.621(...TRUNCATED)	[0.0,0.3330078125,0.666015625,0.9990234375,1.33203125,1.6650390625,1.998046875,2.330078125,2.6640625(...TRUNCATED)	[0.0,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.32763671875,0.327636718(...TRUNCATED)	[0.0,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.3330078125,0.33(...TRUNCATED)	0.327576	0.333	2,198	2,161

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Description

This dataset is part of ongoing research in the MIT Brain and Cognitive Sciences department to collect, homogenize, and open-source C. elegans neural activity data.

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