Add file with all license info from commit 4886e4df catalog-media

Add licenses file to LFS tracking

Add file with merged catalog and media manifest, missing owners added.

Update to accept snakecase license_name for futher compatibility.

Add printout of licenses that don't have URL.

Add script to generate licenses.csv file by adding license URLs to media catalog files.

Add script to match EOL citation data and missing owners to catalog.

Makes file with media manifest content IDs not in predicted catalog for MD5 checks.

File with all (July 26) media manifest content IDs that aren't matching to content IDs in predicted catalog.

Add file with all images that are duplicated (their Medium Source URLs match, but other identifiers are distinct).

Notebooks to explore mismatch between catalog files and media manifest they should represent.

We may have a content/page ID mismatch.

Update file paths to match data move and read in EOL content/page ID cols as ints.

Move EOL-related files to designated subfolder of data.

Update gitattributes for lfs tracking of eol files in new folder.

Make manifests of missing pages

Add data files with page IDs and all associated URLs for missing content IDs.

Add manifest of pages with missing content IDs from jul26 and dec6 to git lfs storage.

ToL IDs with taxa, content IDs and completely missing page IDs (152 not in the newer Dec6 manifest).

ToL IDs with taxa and number of missing content IDs per page id, content ID included is just the first instance of such a content ID.

Explore content of newer media manifest (Dec. 6 download in EOL repo) and compare earlier media manifest.

Merge and organize git lfs files.

v3.3 update visualizations (#4)

Compare content IDs from Media Cargo (all downloaded images).

Merge branch 'main' of https://huggingface.co/datasets/imageomics/ToL-EDA into pr/5

v3.3 Dataset Diversity Overlap Analysis (#6)

Distinguish EOL source data files in gitattributes.

Add data files with missing content IDs to git lfs tracking.

Add list of cargo filenames broken down into constituents of Content ID, Page ID, and URL Type

Add data files with missing content IDs, one with taxa info too.

Look at some of the taxa distribution of images missing from the media manifest.

Confirmed that content IDs that don't match to media manifest are in both TreeOfLife-10M and Rare Species datasets.

Check media manifests from July 6 and 26 to confirm coverage of all listed images; 113K missing link to media manifest.

Add file with all media manifest images that are missing Copyright Owner information for matching with info from Jen.

Remove train_small duplication and add file indicating images missing owner of licenses.

Add LFS tracking for missing owner csv

Analysis of EOL license file, missing content and some missing licenses.

Add EOL license file Sam generated.

Generate csv to store license files for all predicted images in dataset from EOL. This will include Rare Species as well.

Track large license file with LFS.

v3.3 EDA update (#3)

v3.2 EDA Update (#2)

Updated EDA (#1)

Smaller CSV for testing taxa check script.

Merge branch 'main' of https://huggingface.co/datasets/imageomics/ToL-EDA

Updated count information to include all values that should show up as warnings when running check_taxa.

Add yaml metadata to reduce warnings

Generated CSV for testing check_taxa script (auto-check for filled-in taxonomic hierarchy).

Add visuals generated of the dataset distributions for paper (phyla-focused) and histograms of other taxa.

Add notebooks analyzing the dataset contents, taxa distributions, etc. and generating visualizations.