| --- |
| pretty_name: Hepatic Cleaned |
| tags: |
| - chemistry |
| - pharmacokinetics |
| - tabular |
| --- |
| |
| # Hepatic Cleaned |
|
|
| This dataset contains 17,637 accepted finite scalar measurement children from the |
| versioned canonical-base pipeline. A parent row with several unambiguous measurements |
| can produce several child rows. Rejected, malformed, ambiguous, bounded, range-only, |
| TDC-overlapping, and endpoint-unassignable records are not published here. |
|
|
| ## Cleaning |
|
|
| The following source columns are replaced in place with validated canonical or lexical |
| normalizations: |
|
|
| - `smiles` → `canonical_smiles` |
| - `metric_type` → `canonical_endpoint_key` |
| - `assay_system` → `assay_system_normalized` |
| - `species` → `species_normalized` |
| - `molecular_form` → `molecular_form_normalized` |
| - `reported_units` → `unit_normalized` |
| - `enzyme_or_pathway` → `enzyme_or_pathway_normalized` |
| - `qualifying_conditions` → `qualifying_conditions_normalized` |
| - `reported_value` → `scalar_value` |
|
|
| The public column names on the left are retained; the names on the right identify the |
| validated internal values used to replace them. Columns omitted from this dataset: |
|
|
| - `extraction_id`: `internal_identifier` |
| - `global_identifier`: `internal_identifier` |
| - `direction`: `all_null_in_dataset` |
| - `auc_window`: `all_null_in_dataset` |
|
|
| `canonical_endpoint_key` is the endpoint identity field. No `condition_key` is added. |
| `species_exact` is populated only for explicit, unambiguous species references. Narrative |
| and other source fields without a validated normalization remain source text. |
|
|
