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for i in range(len(data['combined_text'])) : data['combined_text'][i] = remove_shortforms(data['combined_text'][i]) data['combined_text'][i] = remove_special_char(data['combined_text'][i]) data['combined_text'][i] = remove_wordswithnum(data['combined_text'][i]) data['combined_text'][i] = lowercase(data['combined_tex...
cosine_similarity(prediction_df.T )
Titanic - Machine Learning from Disaster
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cv = CountVectorizer(ngram_range=(1,3)) text_bow = cv.fit_transform(data['combined_text']) print(text_bow.shape )<split>
from keras.models import Sequential from keras.layers import Dense, Activation, Dropout from keras.optimizers import Adam from keras.regularizers import l2 from keras.callbacks import EarlyStopping from sklearn import preprocessing from keras import regularizers
Titanic - Machine Learning from Disaster
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train_text = text_bow[:train.shape[0]] test_text = text_bow[train.shape[0]:]<split>
Titanic - Machine Learning from Disaster
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X_train,X_test,Y_train,Y_test = train_test_split(train_text,Y,test_size=0.2) print(X_train.shape) print(X_test.shape) print(Y_train.shape) print(Y_test.shape )<compute_train_metric>
Titanic - Machine Learning from Disaster
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lr = LogisticRegression(C=1,penalty='l2',max_iter=2000) lr.fit(X_train,Y_train) pred = lr.predict(X_test) print("F1 score :",f1_score(Y_test,pred)) print("Classification Report :",classification_report(Y_test,pred))<categorify>
vote_est = [ ('ada', ensemble.AdaBoostClassifier()), ('bc', ensemble.BaggingClassifier()), ('etc',ensemble.ExtraTreesClassifier()), ('gbc', ensemble.GradientBoostingClassifier()), ('rfc', ensemble.RandomForestClassifier()), ('gpc', gaussian_process.GaussianProcessClassifier()), ('lr', linear_model.LogisticRegres...
Titanic - Machine Learning from Disaster
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tfidf = TfidfVectorizer(ngram_range=(1,3)) text_tfidf = tfidf.fit_transform(data['combined_text']) print(text_tfidf.shape )<split>
vote_ests = [vote_est, vote_est]
Titanic - Machine Learning from Disaster
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train_text = text_tfidf[:train.shape[0]] test_text = text_tfidf[train.shape[0]:]<split>
Titanic - Machine Learning from Disaster
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X_train,X_test,Y_train,Y_test = train_test_split(train_text,Y,test_size=0.2) print(X_train.shape) print(X_test.shape) print(Y_train.shape) print(Y_test.shape )<compute_train_metric>
Titanic - Machine Learning from Disaster
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lr = LogisticRegression(C=2,penalty='l2',max_iter=2000) lr.fit(X_train,Y_train) pred = lr.predict(X_test) print("F1 score :",f1_score(Y_test,pred)) print("Classification Report :",classification_report(Y_test,pred))<feature_engineering>
best_param = [[ [ {'learning_rate': 0.25, 'n_estimators': 300, 'random_state': 0} ], [ {'max_samples': 0.5, 'n_estimators': 300, 'random_state': 0} ], [ {'criterion': 'entropy', 'max_depth': 8, 'n_estimators': 50, 'random_state': 0} ], [ {'learning_rate': 0.05, 'max_depth': 2, 'n_estimators': 300, 'random_state': 0} ],...
Titanic - Machine Learning from Disaster
3,808,829
print('Loading word vectors...') word2vec = {} with open(os.path.join('.. /input/glove-global-vectors-for-word-representation/glove.6B.200d.txt'), encoding = "utf-8")as f: for line in f: values = line.split() word = values[0] vec = np.asarray(values[1:], dtype='float32') word2vec[word] = vec print('Found %s word vect...
for i in range(len(vote_ests)) : for clf, param in zip(vote_ests[i], best_param[i]): print('The best parameter for {} is {}'.format(clf[1].__class__.__name__, param[0])) clf[1].set_params(**param[0] )
Titanic - Machine Learning from Disaster
3,808,829
train = pd.read_csv(r'/kaggle/input/nlp-getting-started/train.csv') test = pd.read_csv(r'/kaggle/input/nlp-getting-started/test.csv' )<prepare_x_and_y>
grid_hards = [] for i in range(len(vote_ests)) : grid_hard = ensemble.VotingClassifier(estimators = vote_ests[i], voting = 'hard') grid_hard_cv = model_selection.cross_validate(grid_hard, X_trains[i], y_train, cv = cv_split) grid_hard.fit(X_trains[i], y_train) grid_hards.append(grid_hard) print("Hard Voting w/Tuned...
Titanic - Machine Learning from Disaster
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<train_model><EOS>
alg_name = 'GridHardVoting' feature_index = 0 prediction = grid_hards[feature_index].predict(X_tests[feature_index]) temp = {'PassengerID': passenger_id, 'Survived': prediction.astype(int)} result = pd.DataFrame(temp) result.to_csv('result_%s_feature%s.csv'%(alg_name, feature_index), index=False) prediction_df[alg_n...
Titanic - Machine Learning from Disaster
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<SOS> metric: categorizationaccuracy Kaggle data source: titanic-machine-learning-from-disaster<count_unique_values>
import numpy as np import pandas as pd
Titanic - Machine Learning from Disaster
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word2index = tokenizer.word_index print("Number of unique tokens : ",len(word2index))<prepare_x_and_y>
train_data = pd.read_csv('/kaggle/input/titanic/train.csv') test_data = pd.read_csv('/kaggle/input/titanic/test.csv' )
Titanic - Machine Learning from Disaster
12,521,033
train_pad = data_padded[:train.shape[0]] test_pad = data_padded[train.shape[0]:]<categorify>
women = train_data[train_data['Sex'] == 'female']['Survived'] rate_women = sum(women)/len(women) print('% of women who survived:', rate_women )
Titanic - Machine Learning from Disaster
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embedding_matrix = np.zeros(( len(word2index)+1,200)) embedding_vec=[] for word, i in tqdm(word2index.items()): embedding_vec = word2vec.get(word) if embedding_vec is not None: embedding_matrix[i] = embedding_vec<choose_model_class>
men = train_data[train_data.Sex == 'male']['Survived'] rate_men = sum(men)/len(men) print('% of men who survived:', rate_men )
Titanic - Machine Learning from Disaster
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model1 = keras.models.Sequential([ keras.layers.Embedding(len(word2index)+1,200,weights=[embedding_matrix],input_length=100,trainable=False), keras.layers.LSTM(100,return_sequences=True), keras.layers.LSTM(200), keras.layers.Dropout(0.5), keras.layers.Dense(1,activation='sigmoid') ] )<choose_model_class>
train_data[['Sex', 'Survived']].groupby(['Sex'] ).mean()
Titanic - Machine Learning from Disaster
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model1.compile( loss='binary_crossentropy', optimizer='adam', metrics=['accuracy'], )<train_model>
train_data[['Pclass', 'Survived']].groupby(['Pclass'] ).mean()
Titanic - Machine Learning from Disaster
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history1 = model1.fit(train_pad,Y, batch_size=64, epochs=10, validation_split=0.2 )<choose_model_class>
women_count = 0 women_survived_count = 0 for idx, row in train_data.iterrows() : if row['Sex'] == 'female': women_count += 1 if row['Survived'] == 1: women_survived_count += 1 women_survived_count / women_count
Titanic - Machine Learning from Disaster
12,521,033
model2 = keras.models.Sequential([ keras.layers.Embedding(len(word2index)+1,200,weights=[embedding_matrix],input_length=100,trainable=False), keras.layers.GRU(100,return_sequences=True), keras.layers.GRU(200), keras.layers.Dropout(0.5), keras.layers.Dense(1,activation='sigmoid') ] )<choose_model_class>
predictions = [] for idx, row in test_data.iterrows() : if(row['Pclass'] == 1 or row['Pclass'] == 2)and row['Sex'] == 'female': predictions.append(1) elif row['Age'] < 13 and row['Pclass'] != 3: predictions.append(1) else: predictions.append(0 )
Titanic - Machine Learning from Disaster
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model2.compile( loss='binary_crossentropy', optimizer='adam', metrics=['accuracy'], )<train_model>
test_data['Survived'] = predictions
Titanic - Machine Learning from Disaster
12,521,033
<choose_model_class><EOS>
test_data[['PassengerId', 'Survived']].to_csv('submission.csv', index=False )
Titanic - Machine Learning from Disaster
12,362,302
<SOS> metric: categorizationaccuracy Kaggle data source: titanic-machine-learning-from-disaster<choose_model_class>
import numpy as np import pandas as pd
Titanic - Machine Learning from Disaster
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model3.compile( loss='binary_crossentropy', optimizer='adam', metrics=['accuracy'], )<train_model>
train_data = pd.read_csv('/kaggle/input/titanic/train.csv') test_data = pd.read_csv('/kaggle/input/titanic/test.csv' )
Titanic - Machine Learning from Disaster
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history3 = model3.fit(train_pad,Y, batch_size=64, epochs=10, validation_split=0.2 )<choose_model_class>
women = train_data[train_data['Sex'] == 'female']['Survived'] rate_women = sum(women)/len(women) print('% of women who survived:', rate_women )
Titanic - Machine Learning from Disaster
12,362,302
es = tf.keras.callbacks.EarlyStopping(monitor='val_accuracy',mode='max',verbose=1,patience=3 )<train_model>
men = train_data[train_data.Sex == 'male']['Survived'] rate_men = sum(men)/len(men) print('% of men who survived:', rate_men )
Titanic - Machine Learning from Disaster
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history = model3.fit(train_pad,Y, batch_size=64, epochs=30, validation_split=0.2, callbacks=[es] )<predict_on_test>
train_data[['Sex', 'Survived']].groupby(['Sex'] ).mean()
Titanic - Machine Learning from Disaster
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submit = pd.DataFrame(test['id'],columns=['id']) predictions = model3.predict(test_pad) submit['target_prob'] = predictions submit.head()<data_type_conversions>
train_data[['Pclass', 'Survived']].groupby(['Pclass'] ).mean()
Titanic - Machine Learning from Disaster
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target = [None]*len(submit) for i in range(len(submit)) : target[i] = np.round(submit['target_prob'][i] ).astype(int) submit['target'] = target submit.head()<save_to_csv>
women_count = 0 women_survived_count = 0 for idx, row in train_data.iterrows() : if row['Sex'] == 'female': women_count += 1 if row['Survived'] == 1: women_survived_count += 1 women_survived_count / women_count
Titanic - Machine Learning from Disaster
12,362,302
submit = submit.drop('target_prob',axis=1) submit.to_csv('real-nlp_lstm.csv',index=False )<load_from_csv>
count1w = 0 count1m = 0 count2w = 0 count2m = 0 count3w = 0 count3m = 0 countm = 0 countw = 0 for idx, row in train_data.iterrows() : if row['Pclass'] == 1: if row['Sex'] == 'female': count1w += 1 else: count1m += 1 elif row['Pclass'] == 2: if row['Sex'] == 'female': count2w += 1 else: count2m += 1 else: if row['Sex'] ...
Titanic - Machine Learning from Disaster
12,362,302
train = pd.read_csv(r'/kaggle/input/nlp-getting-started/train.csv') test = pd.read_csv(r'/kaggle/input/nlp-getting-started/test.csv' )<prepare_x_and_y>
predictions = [] for idx, row in test_data.iterrows() : if row['Sex'] == 'female': if row['Pclass'] == 1 or row['Pclass'] == 2 or row['Age'] < 25.0: predictions.append(1) else: predictions.append(0) else: if row['Age'] < 18.0 and row['Pclass'] == 1: predictions.append(1) else: predictions.append(0) print(prediction...
Titanic - Machine Learning from Disaster
12,362,302
Y = train['target'] train = train.drop('target',axis=1) text_data_train = train['text'] text_data_test = test['text']<count_values>
test_data['Survived'] = predictions
Titanic - Machine Learning from Disaster
12,362,302
<load_pretrained><EOS>
test_data[['PassengerId', 'Survived']].to_csv('submission.csv', index=False )
Titanic - Machine Learning from Disaster
12,424,800
<SOS> metric: categorizationaccuracy Kaggle data source: titanic-machine-learning-from-disaster<categorify>
import numpy as np import pandas as pd
Titanic - Machine Learning from Disaster
12,424,800
def bert_encode(data,maximum_length): input_ids = [] attention_masks = [] for i in range(len(data)) : encoded = tokenizer.encode_plus( data[i], add_special_tokens=True, max_length=maximum_length, pad_to_max_length=True, return_attention_mask=True, ) input_ids.append(encoded['input_ids']) attention_masks.append(enco...
train_data = pd.read_csv('/kaggle/input/titanic/train.csv') test_data = pd.read_csv('/kaggle/input/titanic/test.csv' )
Titanic - Machine Learning from Disaster
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train_input_ids,train_attention_masks = bert_encode(text_data_train,100) test_input_ids,test_attention_masks = bert_encode(text_data_test,100 )<choose_model_class>
women = train_data[train_data['Sex'] == 'female']['Survived'] rate_women = sum(women)/len(women) print('% of women who survived:', rate_women )
Titanic - Machine Learning from Disaster
12,424,800
def create_model(bert_model): input_ids = tf.keras.Input(shape=(100,),dtype='int32') attention_masks = tf.keras.Input(shape=(100,),dtype='int32') output = bert_model([input_ids,attention_masks]) output = output[1] output = tf.keras.layers.Dense(1,activation='sigmoid' )(output) model = tf.keras.models.Model(inputs =...
men = train_data[train_data.Sex == 'male']['Survived'] rate_men = sum(men)/len(men) print('% of men who survived:', rate_men )
Titanic - Machine Learning from Disaster
12,424,800
history = model.fit([train_input_ids,train_attention_masks],Y, validation_split=0.2, epochs=3, batch_size=5 )<predict_on_test>
train_data[['Sex', 'Survived']].groupby(['Sex'] ).mean()
Titanic - Machine Learning from Disaster
12,424,800
result = model.predict([test_input_ids,test_attention_masks]) result = np.round(result ).astype(int) submit = pd.DataFrame(test['id'],columns=['id']) submit['target'] = result submit.head()<save_to_csv>
train_data[['Pclass', 'Survived']].groupby(['Pclass'] ).mean()
Titanic - Machine Learning from Disaster
12,424,800
submit.to_csv('real_nlp_bert.csv',index=False )<load_from_csv>
women_count = 0 women_survived_count = 0 for idx, row in train_data.iterrows() : if row['Sex'] == 'female': women_count += 1 if row['Survived'] == 1: women_survived_count += 1 women_survived_count / women_count
Titanic - Machine Learning from Disaster
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DATA_DIR = '.. /input/aptos2019-blindness-detection' train_dir = join(DATA_DIR, 'train_images') label_df = pd.read_csv(join(DATA_DIR, 'train.csv')) def train_validation_split(df, val_fraction=0.1): val_ids = np.random.choice(df.id_code, size=int(len(df)* val_fraction)) val_df = df.query('id_code in @val_ids') train_d...
predictions = [] for idx, row in test_data.iterrows() : if(row['Pclass'] == 1 or row['Pclass'] == 2)and row['Sex'] == 'female': predictions.append(1) elif row['Age'] < 15 and row['Pclass'] == 1: predictions.append(1) else: predictions.append(0 )
Titanic - Machine Learning from Disaster
12,424,800
%%time class Diabetic_Retionopathy_Data(Dataset): def __init__(self, image_dir: str, label_df: pd.DataFrame, train=True, transform=transforms.ToTensor() , sample_n=None, in_memory=False, write_images=False): self.image_dir = image_dir self.transform = transform self.train = train self.in_memory = in_memory if sample_...
test_data['Survived'] = predictions
Titanic - Machine Learning from Disaster
12,424,800
def count_parameters(model: nn.Module): return sum([np.prod(x.shape)for x in model.parameters() ]) def print_lr_schedule(lr: float, decay: float, num_epochs=20): print(' learning-rate schedule:') for i in range(num_epochs): if i % 2 == 0: print(f'{i}\t{lr:.6f}') lr = lr* decay net = EfficientNet.from_name('efficient...
test_data[['PassengerId', 'Survived']].to_csv('submission.csv', index=False )
Titanic - Machine Learning from Disaster
6,637,182
%%time best_epoch_score = np.inf print('epoch\ttrain-MSE\tval-MSE\tq-kappa\tlr\t\ttime [min]') print('------------------------------------------------------------------') for epoch in range(25): start = time.time() train_loss = [] for i,(X, y, id_)in enumerate(train_loader): net.train() optimizer.zero_grad() out = ne...
sns.set(style="ticks", context="talk")
Titanic - Machine Learning from Disaster
6,637,182
test_dir = join(DATA_DIR, 'test_images') test_df = pd.read_csv(join(DATA_DIR, 'test.csv')) test_df.head(3 )<categorify>
testing = pd.read_csv('/kaggle/input/titanic/test.csv') train = pd.read_csv('/kaggle/input/titanic/train.csv') target = 'Survived' test = testing.copy() test.info() print('-'*70) train.info() print('-'*70) train.tail(10 )
Titanic - Machine Learning from Disaster
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def sample_images(train_dir: str, test_dir: str, n=10): train_files = choice(os.listdir(train_dir), size=n) test_files = choice(os.listdir(test_dir), size=n) images = [] for train_f, test_f in zip(train_files, test_files): train_img = Image.open(join(train_dir, train_f)) test_img = Image.open(join(test_dir, test_f)...
print(train[['Pclass', 'Survived']].groupby(['Pclass'], as_index=False ).mean().sort_values(by='Survived', ascending=False ).round(2), ' ', train[['Sex', 'Survived']].groupby(['Sex'], as_index=False ).mean().sort_values(by='Survived', ascending=False ).round(2))
Titanic - Machine Learning from Disaster
6,637,182
test_transform = transforms.Compose([ transforms.Resize(( 256, 256)) , transforms.RandomHorizontalFlip() , transforms.RandomRotation(( -20, 20)) , transforms.ToTensor() , transforms.Normalize([0.485, 0.456, 0.406], [0.229, 0.224, 0.225]) ]) test_ds = Diabetic_Retionopathy_Data(test_dir, test_df, transform=test_transf...
train['agebucket'] = pd.cut(train['Age'], 5) test['agebucket'] = pd.cut(test['Age'], 5) train[['agebucket', 'Survived']].groupby(['agebucket'] ).mean().sort_values(by='agebucket', ascending=True ).round(2 )
Titanic - Machine Learning from Disaster
6,637,182
net.load_state_dict(torch.load('state_dict_best.pt')) net.eval() net.cuda() id2prediction = {} for i,(X, id_)in enumerate(test_loader): out = net(X.cuda()) preds = out.detach().cpu().numpy().ravel() id2prediction = {**id2prediction, **dict(zip(id_, preds.round().astype(int ).tolist())) }<save_to_csv>
for dataset in [train, test]: dataset.loc[ dataset['Age'] <= 16, 'Age'] = 0 dataset.loc[(dataset['Age'] > 16)&(dataset['Age'] <= 32), 'Age'] = 1 dataset.loc[(dataset['Age'] > 32)&(dataset['Age'] <= 48), 'Age'] = 2 dataset.loc[(dataset['Age'] > 48)&(dataset['Age'] <= 64), 'Age'] = 3 dataset.loc[ dataset['Age'] > 64, 'Ag...
Titanic - Machine Learning from Disaster
6,637,182
submission_df = pd.read_csv(join(DATA_DIR, 'sample_submission.csv')) submission_df.diagnosis = submission_df.id_code.map(id2prediction) submission_df.diagnosis = submission_df.diagnosis.map(lambda p: max(p, 0)) submission_df.diagnosis = submission_df.diagnosis.map(lambda p: min(p, 4)) submission_df.to_csv('submission....
print(train[['Family', 'Survived']].groupby(['Family'], as_index=False ).mean().sort_values(by='Survived', ascending=False ).round(2), ' ', train[['Title', 'Survived']].groupby(['Title'], as_index=False ).mean().sort_values(by='Survived', ascending=False ).round(2))
Titanic - Machine Learning from Disaster
6,637,182
!pip install -U '.. /input/install/efficientnet-0.0.3-py2.py3-none-any.whl'<load_from_csv>
train['isalone'] = [1 if x == 1 else 0 for x in train['Family']] test['isalone'] = [1 if x == 1 else 0 for x in test['Family']] train[['isalone', 'Survived']].groupby(['isalone'] ).mean().sort_values(by='Survived', ascending=False ).round(2 )
Titanic - Machine Learning from Disaster
6,637,182
TEST_IMG_PATH = '.. /input/aptos2019-blindness-detection/test_images/' test_df = pd.read_csv('.. /input/aptos2019-blindness-detection/test.csv') print(test_df.shape) original_names = test_df['id_code'].values test_df['id_code'] = test_df['id_code'] + ".png" test_df['diagnosis'] = np.zeros(test_df.shape[0]) display(t...
dummy_features = ['Sex','Title', 'isalone'] drop_features = ['Embarked', 'PassengerId', 'Ticket', 'Name', 'Cabin','Parch','SibSp', 'agebucket'] train = pd.concat([train, pd.get_dummies(train[dummy_features])], axis = 1, sort = False) train.drop(columns = train[dummy_features], inplace = True) train.drop(columns = tra...
Titanic - Machine Learning from Disaster
6,637,182
HEIGHT = 300 WIDTH = 300 COEFF = [0.5,1.5,2.5,3.5] efficientnetb3 = EfficientNetB3( weights=None, input_shape=(HEIGHT,WIDTH,3), include_top=False ) def build_model() : model = Sequential() model.add(efficientnetb3) model.add(layers.GlobalAveragePooling2D()) model.add(layers.Dropout(0.5)) model.add(layers.Dense(5, ...
y = train[target] x = train.drop(columns = target) x_train, x_test, y_train, y_test = train_test_split(x, y, test_size=0.25, random_state = 42 )
Titanic - Machine Learning from Disaster
6,637,182
tta_steps = 4 predictions = [] for i in tqdm(range(tta_steps)) : test_generator = ImageDataGenerator(rescale=1./255, horizontal_flip=True, rotation_range= 90, vertical_flip=True, brightness_range=(0.5,2), zoom_range= 0.2, fill_mode='constant', cval = 0 ).flow_from_dataframe(test_df, x_col='id_code', y_col = 'diagnosis'...
RF = ensemble.RandomForestClassifier() RF_params = { 'n_estimators':[n for n in range(60,140,10)], 'max_depth':[n for n in range(3, 6)], 'max_features' : ['sqrt', 'log2', None], 'random_state' : [42] } RF_model = GridSearchCV(RF, param_grid = RF_params, cv = 5, n_jobs = -1 ).fit(x_train, y_train) print("Best Hyper Par...
Titanic - Machine Learning from Disaster
6,637,182
del model gc.collect()<choose_model_class>
GBT = ensemble.GradientBoostingClassifier() GBT_params = { 'n_estimators':[n for n in range(180, 240, 20)], 'max_depth':[n for n in range(3, 6)], 'learning_rate': [0.1, 0.25, 0.5], 'random_state' : [42] } GBT_model = GridSearchCV(GBT, param_grid = GBT_params, cv = 5, n_jobs = -1) GBT_model.fit(x_train, y_train) print...
Titanic - Machine Learning from Disaster
6,637,182
HEIGHT = 320 WIDTH = 320 COEFF = [0.53164905, 1.37748383, 2.60330927, 3.40191179] def build_model() : efficientnetb3 = EfficientNetB3( weights=None, input_shape=(HEIGHT,WIDTH,3), include_top=False ) model = Sequential() model.add(efficientnetb3) model.add(layers.GlobalAveragePooling2D()) model.add(layers.Dropout(0...
print("GBT cohen_kappa_score: %.3f" % cohen_kappa_score(y_test, GBT_predictions)) print("RF cohen_kappa_score: %.3f" % cohen_kappa_score(y_test, RF_predictions))
Titanic - Machine Learning from Disaster
6,637,182
tta_steps = 4 predictions = [] for i in tqdm(range(tta_steps)) : test_generator = ImageDataGenerator(rescale=1./255, horizontal_flip=True, rotation_range= 90, vertical_flip=True, brightness_range=(0.5,2), zoom_range= 0.2, fill_mode='constant', preprocessing_function=preprocess_image, cval = 0 ).flow_from_dataframe(test...
print("GBT", classification_report(y_test, GBT_predictions)) print("-"*100) print("RF", classification_report(y_test, RF_predictions))
Titanic - Machine Learning from Disaster
6,637,182
del model gc.collect()<define_variables>
predict_RF = RF_model.predict(test) predict_GBT = GBT_model.predict(test) submit_RF = pd.DataFrame({'PassengerId':testing['PassengerId'],'Survived':predict_RF}) submit_GBT = pd.DataFrame({'PassengerId':testing['PassengerId'],'Survived':predict_GBT}) filename_RF = 'Titanic Prediction RF.csv' submit_RF.to_csv(filenam...
Titanic - Machine Learning from Disaster
7,481,879
tta_steps = 3 predictions = [] for i in tqdm(range(tta_steps)) : test_generator = ImageDataGenerator(horizontal_flip=True, vertical_flip=True, brightness_range=(0.5,2), zoom_range= 0.2, fill_mode='constant', cval = 0 ).flow_from_dataframe(test_df, x_col='id_code', y_col = 'diagnosis', directory = TEST_IMG_PATH, target_...
from sklearn.ensemble import GradientBoostingClassifier from sklearn.model_selection import train_test_split from sklearn.preprocessing import LabelEncoder
Titanic - Machine Learning from Disaster
7,481,879
K.clear_session() cuda.select_device(0) cuda.close()<set_options>
def extract(m): m = m.split(',')[1] m = m.split('.')[0] return m[1:]
Titanic - Machine Learning from Disaster
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! nvidia-smi<set_options>
path = '/kaggle/input/titanic/train.csv' df = pd.read_csv(path) df['Name'] = df['Name'].apply(extract) df['Name'] = df['Name'].apply(lambda x: x if x in ['Mr','Mrs','Miss','Master'] else 'Others') df['Parch'] = df['Parch'].apply(lambda x: x if x in [0,1,2] else 4.5)
Titanic - Machine Learning from Disaster
7,481,879
%reload_ext autoreload %autoreload 2 %matplotlib inline warnings.filterwarnings("ignore") %matplotlib inline warnings.filterwarnings('ignore') GlobalParams = collections.namedtuple('GlobalParams', [ 'batch_norm_momentum', 'batch_norm_epsilon', 'dropout_rate', 'num_classes', 'width_coefficient', 'depth_coefficient', '...
df = df.fillna(df.mean()) df['Embarked'] = df['Embarked'].apply(lambda x : x if(x=='C' or x=='Q')else 'S') df['Embarked'].unique() print(df.count()) le = LabelEncoder() le.fit(df['Sex']) df['Sex'] = le.transform(df['Sex']) le.fit(df['Name']) df['Name'] = le.transform(df['Name']) le.fit(df['Embarked']) df['Embar...
Titanic - Machine Learning from Disaster
7,481,879
md_ef = EfficientNet.from_pretrained('efficientnet-b5', num_classes=1) !mkdir models !cp '.. /input/kaggle-public/abcdef.pth' 'models'<categorify>
features = ['Pclass','Sex','SibSp','Parch','Fare','Embarked','Name'] y = df['Survived'] X = df[features]
Titanic - Machine Learning from Disaster
7,481,879
tta = 3 bs = 64 tfms = get_transforms(do_flip=True,flip_vert=True) sz = 256 data =(ImageList.from_df(df=df,path='./',cols='path') .split_by_rand_pct(0.2) .label_from_df(cols='diagnosis',label_cls=FloatList) .transform(tfms,size=sz,resize_method=ResizeMethod.SQUISH,padding_mode='zeros') .databunch(bs=bs,num_workers=4) ...
for i in range(1): X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2, random_state=42) model = GradientBoostingClassifier(n_estimators = 200, max_depth = 3) model.fit(X_train,y_train) print(i,(model.predict(X_train)-y_train==0 ).sum() *100/len(y_train)) print(( model.predict(X_test)-y_test==0 )...
Titanic - Machine Learning from Disaster
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y_test_4 = opt.predict(preds, coef=[0.5, 1.5, 2.5, 3.5]) y_test_4 = y_test_4.flatten()<train_model>
df3 = pd.read_csv('/kaggle/input/titanic/gender_submission.csv') df3
Titanic - Machine Learning from Disaster
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def train_model(tfms,bs,sz): data =(ImageList.from_df(df=df,path='./',cols='path') .split_by_rand_pct(0.2) .label_from_df(cols='diagnosis',label_cls=FloatList) .transform(tfms,size=sz,resize_method=ResizeMethod.SQUISH,padding_mode='reflection') .databunch(bs=bs,num_workers=4) .normalize(imagenet_stats) ) learn = Learn...
model.fit(X,y) df2 = pd.read_csv('/kaggle/input/titanic/test.csv') df2['Name'] = df2['Name'].apply(extract) df2['Name'] = df2['Name'].apply(lambda x: x if x in ['Mr','Mrs','Miss','Master'] else 'Others') df2['Parch'] = df2['Parch'].apply(lambda x: x if x in [0,1,2] else 4.5) df2 = df2.fillna(df.mean()) df2['Embar...
Titanic - Machine Learning from Disaster
7,481,879
<compute_test_metric><EOS>
sub.to_csv('Submission.csv',index=False )
Titanic - Machine Learning from Disaster
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<SOS> metric: categorizationaccuracy Kaggle data source: titanic-machine-learning-from-disaster<categorify>
sns.set() %matplotlib inline warnings.filterwarnings('ignore')
Titanic - Machine Learning from Disaster
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COEFF = [0.5, 1.5, 2.5, 3.5] for i, pred in enumerate(y_test): if pred < COEFF[0]: y_test[i] = 0 elif pred >= COEFF[0] and pred < COEFF[1]: y_test[i] = 1 elif pred >= COEFF[1] and pred < COEFF[2]: y_test[i] = 2 elif pred >= COEFF[2] and pred < COEFF[3]: y_test[i] = 3 else: y_test[i] = 4<save_to_csv>
path_train = '.. /input/train.csv' path_test = '.. /input/test.csv'
Titanic - Machine Learning from Disaster
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test_df['diagnosis'] = y_test.astype(int) test_df['id_code'] = test_df['id_code'].str.replace(r'.png$', '') test_df.to_csv('submission.csv',index=False) print("Submission Distribution:") print(round(test_df.diagnosis.value_counts() /len(test_df)*100,4))<define_variables>
train_df_raw = pd.read_csv(path_train) train_df_raw.head()
Titanic - Machine Learning from Disaster
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DEVICE = torch.device("cuda:0") DATA_SOURCE = os.path.join(".. ","input","aptos2019-blindness-detection") MODEL_SOURCE = os.path.join(".. ","input","densenet161-1-18-v2-pth") MODEL_SIZE = 224<prepare_x_and_y>
draw_missing_data_table(train_df_raw )
Titanic - Machine Learning from Disaster
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def crop_image(img,tol=7): w, h = img.shape[1],img.shape[0] gray_img = cv2.cvtColor(img, cv2.COLOR_RGB2GRAY) gray_img = cv2.blur(gray_img,(5,5)) shape = gray_img.shape gray_img = gray_img.reshape(-1,1) quant = quantile_transform(gray_img, n_quantiles=256, random_state=0, copy=True) quant =(quant*256 ).astype(int) g...
def preprocess_data(df): processed_df = df processed_df['Embarked'].fillna('C', inplace=True) processed_df['Age'] = processed_df.groupby(['Pclass','Sex','Parch','SibSp'])['Age'].transform(lambda x: x.fillna(x.mean())) processed_df['Age'] = processed_df.groupby(['Pclass','Sex','Parch'])['Age'].transform(lambda x: x.fil...
Titanic - Machine Learning from Disaster
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class RetinopathyDataset(Dataset): def __init__(self, transform, is_test=False): self.transform = transform self.base_transform = transforms.Resize(( MODEL_SIZE, MODEL_SIZE)) self.is_test = is_test if not os.path.exists("cache"): os.mkdir("cache") if is_test : file = "test.csv" else : file = "train.csv" csv_file = os....
train_df = train_df_raw.copy() X = train_df.drop(['Survived'], 1) Y = train_df['Survived'] X = preprocess_data(X) sc = StandardScaler() X = pd.DataFrame(sc.fit_transform(X.values), index=X.index, columns=X.columns) X_train, X_test, Y_train, Y_test = train_test_split(X, Y, test_size=0.2, random_state=42) X_train.hea...
Titanic - Machine Learning from Disaster
1,759,840
NUM_FOLDS = 5 data_augmentation = transforms.Compose([ transforms.RandomRotation(( -15, 15)) , transforms.Resize(224), transforms.RandomHorizontalFlip() , transforms.RandomVerticalFlip() , transforms.ToTensor() , transforms.Normalize([0.485, 0.456, 0.406], [0.229, 0.224, 0.225]) ]) DATA = RetinopathyDataset(data_augm...
lg = LogisticRegression(solver='lbfgs', random_state=42) lg.fit(X_train, Y_train) logistic_prediction = lg.predict(X_test) score = metrics.accuracy_score(Y_test, logistic_prediction) display_confusion_matrix(Y_test, logistic_prediction, score=score )
Titanic - Machine Learning from Disaster
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def get_dataloader_for_fold(n, data, train_data, eval_data, batch_size): train_sampler = SubsetRandomSampler(train_data[n]) valid_sampler = SubsetRandomSampler(eval_data[n]) data_loader_train = torch.utils.data.DataLoader(data, batch_size=batch_size, drop_last=False, sampler=train_sampler) data_loader_eval = torch...
dt = DecisionTreeClassifier(min_samples_split=15, min_samples_leaf=20, random_state=42) dt.fit(X_train, Y_train) dt_prediction = dt.predict(X_test) score = metrics.accuracy_score(Y_test, dt_prediction) display_confusion_matrix(Y_test, dt_prediction, score=score )
Titanic - Machine Learning from Disaster
1,759,840
class Classificator0(nn.Module): def __init__(self, size=128): super(Classificator0, self ).__init__() self.size = size self.network = nn.Sequential( nn.BatchNorm1d(size), nn.Dropout(p=0.3), nn.Linear(in_features=size, out_features=5, bias=True), ) def forward(self, x): return self.network(x) class Classificator(...
svm = SVC(gamma='auto', random_state=42) svm.fit(X_train, Y_train) svm_prediction = svm.predict(X_test) score = metrics.accuracy_score(Y_test, svm_prediction) display_confusion_matrix(Y_test, svm_prediction, score=score )
Titanic - Machine Learning from Disaster
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def get_base_model() : model = torchvision.models.densenet161(pretrained=False) in_features = model.classifier.in_features model.classifier = Classificator0(in_features) model_path = os.path.join(MODEL_SOURCE, "densenet161.1.18.v2.pth") model.load_state_dict(torch.load(model_path)) model.classifier = Classificator...
rf = RandomForestClassifier(n_estimators=200, random_state=42) rf.fit(X_train, Y_train) rf_prediction = rf.predict(X_test) score = metrics.accuracy_score(Y_test, rf_prediction) display_confusion_matrix(Y_test, rf_prediction, score=score )
Titanic - Machine Learning from Disaster
1,759,840
def train_model(model, optimizer, scheduler, train_data_loader, eval_data_loader, file_name, num_epochs = 50, patience = 7, prev_loss = 1000.00): criterion = nn.CrossEntropyLoss() countdown = patience best_loss = 1000.00 since = time.time() for epoch in range(num_epochs): running_loss = 0.0 counter = 0 for bi, d in e...
def build_ann(optimizer='adam'): ann = Sequential() ann.add(Dense(units=32, kernel_initializer='glorot_uniform', activation='relu', input_shape=(13,))) ann.add(Dense(units=64, kernel_initializer='glorot_uniform', activation='relu')) ann.add(Dropout(rate=0.5)) ann.add(Dense(units=64, kernel_initializer='glorot_uniform'...
Titanic - Machine Learning from Disaster
1,759,840
batch_size = 56 num_round_per_fold = 2 for no in range(NUM_FOLDS): print("-"*22, "fold",no) bst_loss = 10000.00 for r in range(num_round_per_fold): print("-"*11,"round",r) data_loader_train, data_loader_eval = get_dataloader_for_fold(no, DATA, data_train, data_eval, batch_size) model = get_base_model() plist = [{"pa...
opt = optimizers.Adam(lr=0.001) ann = build_ann(opt) history = ann.fit(X_train, Y_train, batch_size=16, epochs=30, validation_data=(X_test, Y_test))
Titanic - Machine Learning from Disaster
1,759,840
def get_trained_model(no): extractor = torchvision.models.densenet161(pretrained=False) in_features = extractor.classifier.in_features extractor.classifier = Classificator(in_features) model_path = os.path.join("tmp"+str(no)+".pth") extractor.load_state_dict(torch.load(model_path)) extractor = extractor.to(DEVICE)...
ann_prediction = ann.predict(X_test) ann_prediction =(ann_prediction > 0.5) score = metrics.accuracy_score(Y_test, ann_prediction) display_confusion_matrix(Y_test, ann_prediction, score=score )
Titanic - Machine Learning from Disaster
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def get_extractor_model(no): extractor = get_trained_model(no) extractor.classifier = nn.Identity() extractor = extractor.to(DEVICE) extractor.eval() return extractor<categorify>
n_folds = 10 cv_score_lg = cross_val_score(estimator=lg, X=X_train, y=Y_train, cv=n_folds, n_jobs=-1) cv_score_dt = cross_val_score(estimator=dt, X=X_train, y=Y_train, cv=n_folds, n_jobs=-1) cv_score_svm = cross_val_score(estimator=svm, X=X_train, y=Y_train, cv=n_folds, n_jobs=-1) cv_score_rf = cross_val_score(estim...
Titanic - Machine Learning from Disaster
1,759,840
def get_train_features(data_loader, extractor): for bi, d in enumerate(data_loader): print(".", end="") img_tensor = d["image"].to(DEVICE) target = d["label"].numpy() with torch.no_grad() : feature = extractor(img_tensor) feature = feature.cpu().detach().squeeze(0 ).numpy() if bi == 0 : features = feature targets ...
cv_result = {'lg': cv_score_lg, 'dt': cv_score_dt, 'svm': cv_score_svm, 'rf': cv_score_rf, 'ann': cv_score_ann} cv_data = {model: [score.mean() , score.std() ] for model, score in cv_result.items() } cv_df = pd.DataFrame(cv_data, index=['Mean_accuracy', 'Variance']) cv_df
Titanic - Machine Learning from Disaster
1,759,840
XGBOOST_PARAM = { "random_state" : 42, "n_estimators" : 200, "objective" : "multi:softmax", "num_class" : 5, "eval_metric" : "mlogloss", }<feature_engineering>
class EsemblingClassifier: def __init__(self, verbose=True): self.ann = build_ann(optimizer=optimizers.Adam(lr=0.001)) self.rf = RandomForestClassifier(n_estimators=300, max_depth=11, random_state=42) self.svm = SVC(random_state=42) self.trained = False self.verbose = verbose def fit(self, X, y): if self.verbose: pri...
Titanic - Machine Learning from Disaster
1,759,840
batch_size = 64 eval_set = [] for no in range(NUM_FOLDS): print("-"*22, "fold",no) data_loader_train, data_loader_eval = get_dataloader_for_fold(no, DATA, data_train, data_eval, batch_size) extractor = get_extractor_model(no) print("...........|.............................................|") features_eval, targets...
ens = EsemblingClassifier() ens.fit(X_train, Y_train) ens_prediction = ens.predict(X_test) score = metrics.accuracy_score(Y_test, ens_prediction) display_confusion_matrix(Y_test, ens_prediction, score=score )
Titanic - Machine Learning from Disaster
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base_transform = transforms.Compose([ transforms.Resize(224), transforms.ToTensor() , transforms.Normalize([0.485, 0.456, 0.406], [0.229, 0.224, 0.225]) ]) DATA.transform = base_transform<categorify>
test_df_raw = pd.read_csv(path_test) test = test_df_raw.copy() test = preprocess_data(test) test = pd.DataFrame(sc.fit_transform(test.values), index=test.index, columns=test.columns) test.head()
Titanic - Machine Learning from Disaster
1,759,840
<choose_model_class><EOS>
model_test = EsemblingClassifier() model_test.fit(X, Y) prediction = model_test.predict(test) result_df = test_df_raw.copy() result_df['Survived'] = prediction result_df.to_csv('submission.csv', columns=['PassengerId', 'Survived'], index=False )
Titanic - Machine Learning from Disaster
7,677,885
<SOS> metric: categorizationaccuracy Kaggle data source: titanic-machine-learning-from-disaster<create_dataframe>
%matplotlib inline
Titanic - Machine Learning from Disaster
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base_transform = transforms.Compose([ transforms.Resize(224), transforms.ToTensor() , transforms.Normalize([0.485, 0.456, 0.406], [0.229, 0.224, 0.225]) ]) data_test = RetinopathyDataset(base_transform, is_test=True) data_loader = torch.utils.data.DataLoader(data_test, batch_size=16, shuffle=False, num_workers=0, dr...
train_file_path = ".. /input/titanic/train.csv" test_file_path = ".. /input/titanic/test.csv" train_data = pd.read_csv(train_file_path) test_data = pd.read_csv(test_file_path )
Titanic - Machine Learning from Disaster
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print("................................ v") predictions = np.zeros(( len(data_test),5)) for tta in range(1): print("............ tta"+str(tta)+"................ ") for no in range(NUM_FOLDS): extractor = get_extractor_model(no) features = get_test_features(data_loader, extractor) print("",no) xgb_model = xgb.XGBCl...
train_data.groupby(by=['Pclass'] ).count()
Titanic - Machine Learning from Disaster
7,677,885
batch_size = 8 data_augmentation = transforms.Compose([ transforms.Resize(( MODEL_SIZE, MODEL_SIZE)) , transforms.RandomHorizontalFlip() , transforms.RandomVerticalFlip() , transforms.ToTensor() , transforms.Normalize([0.485, 0.456, 0.406], [0.229, 0.224, 0.225]) ]) data_test = RetinopathyDataset(data_augmentation, i...
perc = train_data[['Pclass', 'Survived']].groupby(['Pclass'], as_index=False ).mean().sort_values(by='Survived', ascending=False) perc*100
Titanic - Machine Learning from Disaster
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softmax = nn.Softmax(dim=1) for tta in range(4): print("............ tta"+str(tta)+"...............") for no in range(NUM_FOLDS): model = get_trained_model(no) batch_slice =(0, 0) for bi, d in enumerate(data_loader): if bi %(64//batch_size)== 0 : print(".", end="") img_tensor = d["image"].to(DEVICE, dtype=torch.fl...
def extract_title(name): for string in name.split() : if '.' in string: return string[:-1] train_data['Title'] = train_data['Name'].apply(lambda n: extract_title(n)) test_data['Title'] = test_data['Name'].apply(lambda n: extract_title(n)) print(test_data['Title'].value_counts() ,' ',train_data['Title'].value_counts()...
Titanic - Machine Learning from Disaster
7,677,885
prediction_final = predictions.argmax(axis=1) csv_file = os.path.join(DATA_SOURCE, "sample_submission.csv") df = pd.read_csv(csv_file) df["diagnosis"] = prediction_final df.to_csv('submission.csv',index=False )<feature_engineering>
for dataframe in [train_data, test_data]: dataframe['Title'] = dataframe['Title'].replace('Mlle', 'Miss') dataframe['Title'] = dataframe['Title'].replace('Ms', 'Miss') dataframe['Title'] = dataframe['Title'].replace('Mme', 'Mrs') dataframe['Title'] = dataframe['Title'].replace(['Lady', 'Capt', 'Col','Don', 'Dr', 'Ma...
Titanic - Machine Learning from Disaster
7,677,885
t_start = time.time()<define_variables>
print('% of survived females:', train_data['Survived'][train_data['Sex'] == 'female'].value_counts(normalize = True)[1]*100) print('% of survived males:', train_data['Survived'][train_data['Sex'] == 'male'].value_counts(normalize = True)[1]*100)
Titanic - Machine Learning from Disaster
7,677,885
IMG_WIDTH = 456 IMG_HEIGHT = 456 CHANNEL = 3 BATCH_SIZE = 4 EPOCHS_OLD_DATA = 10 WARMUP_EPOCHS = 3 NUM_CLASSES = 5 SEED = 2 LEARNING_RATE = 1e-4 WARMUP_LEARNING_RATE = 1e-3 ES_PATIENCE = 5 RLROP_PATIENCE = 3 DECAY_DROP = 0.5<define_variables>
train_data[['Sex', 'Survived']].groupby(['Sex'], as_index=False ).mean().sort_values(by='Survived', ascending=False )
Titanic - Machine Learning from Disaster
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BASE_DIR = '/kaggle/input/aptos2019-blindness-detection/' TRAIN_DIR = '/kaggle/input/aptos2019-blindness-detection/train_images' TEST_DIR = '/kaggle/input/aptos2019-blindness-detection/test_images' TRAIN_DIR = '/kaggle/input/diabetic-retinopathy-resized/resized_train/resized_train'<load_from_csv>
train_data['FamilySize'] = train_data['SibSp'] + train_data['Parch'] test_data['FamilySize'] = train_data['SibSp'] + train_data['Parch'] train_data['IsAlone'] = train_data['FamilySize'].apply(lambda fs: 1 if fs == 0 else 0) test_data['IsAlone'] = test_data['FamilySize'].apply(lambda fs: 1 if fs == 0 else 0 )
Titanic - Machine Learning from Disaster
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TRAIN_DF = pd.read_csv(BASE_DIR + "train.csv",dtype='object') TEST_DF = pd.read_csv(BASE_DIR + "test.csv",dtype='object') TRAIN_DF = pd.read_csv("/kaggle/input/diabetic-retinopathy-resized/trainLabels.csv",dtype='object') X_COL='id_code' Y_COL='diagnosis'<rename_columns>
train_data[['FamilySize', 'Survived']].groupby('FamilySize', as_index=False ).mean().sort_values(by='Survived', ascending=False )
Titanic - Machine Learning from Disaster
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TRAIN_DF.columns = ['id_code', 'diagnosis'] <categorify>
train_data.drop(['Parch', 'SibSp'], axis=1, inplace=True) test_data.drop(['Parch', 'SibSp'], axis=1, inplace=True )
Titanic - Machine Learning from Disaster
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def append_file_ext(file_name): return file_name + ".png" def append_file_ext_jpeg(file_name): return file_name.replace(".png",".jpeg" )<feature_engineering>
train_data[['Ticket', 'PassengerId']].groupby('Ticket', as_index=False ).count().sort_values('PassengerId', ascending=False )
Titanic - Machine Learning from Disaster
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TRAIN_DF[X_COL] = TRAIN_DF[X_COL].apply(append_file_ext) TEST_DF[X_COL] = TEST_DF[X_COL].apply(append_file_ext) TRAIN_DF[X_COL] = TRAIN_DF[X_COL].apply(append_file_ext_jpeg )<concatenate>
train_data['TicketGroupSize'] = train_data.groupby(['Ticket'])['PassengerId'].transform('count') test_data['TicketGroupSize'] = test_data.groupby(['Ticket'])['PassengerId'].transform('count' )
Titanic - Machine Learning from Disaster
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df0 = TRAIN_DF.loc[TRAIN_DF['diagnosis'] == '0'] df1 = TRAIN_DF.loc[TRAIN_DF['diagnosis'] == '1'] df2 = TRAIN_DF.loc[TRAIN_DF['diagnosis'] == '2'] df3 = TRAIN_DF.loc[TRAIN_DF['diagnosis'] == '3'] df4 = TRAIN_DF.loc[TRAIN_DF['diagnosis'] == '4'] df0 = df0.head(2000) df1 = df1.head(2000) df2 = df2.head(2000) TRAIN_DF ...
train_data.drop('Ticket', axis=1, inplace=True) test_data.drop('Ticket', axis=1, inplace=True )
Titanic - Machine Learning from Disaster
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def create_model(input_shape, n_out): input_tensor = Input(shape=input_shape) base_model = EfficientNetB5(weights=None, include_top=False, input_tensor=input_tensor) base_model.load_weights('/kaggle/input/efficientnet-keras-weights-b0b5/efficientnet-b5_imagenet_1000_notop.h5') x = GlobalAveragePooling2D()(base_model...
fare_median = test_data['Fare'].median() test_data['Fare'] = test_data['Fare'].fillna(fare_median )
Titanic - Machine Learning from Disaster