kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def _configure_buffer_sizes(): """Set up module globals controlling buffer sizes""" global PIPE_BUF_BYTES global OS_PIPE_SZ PIPE_BUF_BYTES = 65536 OS_PIPE_SZ = None # Teach the 'fcntl' module about 'F_SETPIPE_SZ', which is a Linux-ism, # but a good one that can drastically reduce the numbe...	[ "def", "_configure_buffer_sizes", "(", ")", ":", "global", "PIPE_BUF_BYTES", "global", "OS_PIPE_SZ", "PIPE_BUF_BYTES", "=", "65536", "OS_PIPE_SZ", "=", "None", "# Teach the 'fcntl' module about 'F_SETPIPE_SZ', which is a Linux-ism,", "# but a good one that can drastically reduce the ...	36.296296	20.592593
def _compute_projection_pick(artist, path, xy): """ Project xy on path to obtain a `Selection` for artist. path is first transformed to screen coordinates using the artist transform, and the target of the returned `Selection` is transformed back to data coordinates using the artist axes i...	[ "def", "_compute_projection_pick", "(", "artist", ",", "path", ",", "xy", ")", ":", "transform", "=", "artist", ".", "get_transform", "(", ")", ".", "frozen", "(", ")", "tpath", "=", "(", "path", ".", "cleaned", "(", "transform", ")", "if", "transform", ...	44.865385	20.288462
def tx_xml(self): """ Return the ``<c:tx>`` (tx is short for 'text') element for this series as unicode text. This element contains the series name. """ return self._tx_tmpl.format(**{ 'wksht_ref': self._series.name_ref, 'series_name': self.name, ...	[ "def", "tx_xml", "(", "self", ")", ":", "return", "self", ".", "_tx_tmpl", ".", "format", "(", "", "", "{", "'wksht_ref'", ":", "self", ".", "_series", ".", "name_ref", ",", "'series_name'", ":", "self", ".", "name", ",", "'nsdecls'", ":", "''", ",...	34.5	13.7
def close(self): """ Mark the scope as closed, i.e. all symbols have been declared, and no further declarations should be done. """ if self._closed: raise ValueError('scope is already marked as closed') # By letting parent know which symbols this scope has l...	[ "def", "close", "(", "self", ")", ":", "if", "self", ".", "_closed", ":", "raise", "ValueError", "(", "'scope is already marked as closed'", ")", "# By letting parent know which symbols this scope has leaked, it", "# will let them reserve all lowest identifiers first.", "if", "...	34.1875	21.5625
def path_to_ls(fn): """ Converts an absolute path to an entry resembling the output of the ls command on most UNIX systems.""" st = os.stat(fn) full_mode = 'rwxrwxrwx' mode = '' file_time = '' d = '' for i in range(9): # Incrementally builds up the 9 character string, using c...	[ "def", "path_to_ls", "(", "fn", ")", ":", "st", "=", "os", ".", "stat", "(", "fn", ")", "full_mode", "=", "'rwxrwxrwx'", "mode", "=", "''", "file_time", "=", "''", "d", "=", "''", "for", "i", "in", "range", "(", "9", ")", ":", "# Incrementally buil...	45.8125	24.625
def estimate_cpd(self, node): """ Method to estimate the CPD for a given variable. Parameters ---------- node: int, string (any hashable python object) The name of the variable for which the CPD is to be estimated. Returns ------- CPD: Tabula...	[ "def", "estimate_cpd", "(", "self", ",", "node", ")", ":", "state_counts", "=", "self", ".", "state_counts", "(", "node", ")", "# if a column contains only `0`s (no states observed for some configuration", "# of parents' states) fill that column uniformly instead", "state_counts"...	37.410714	19.696429
async def commit_prepared(self, xid, *, is_prepared=True): """Commit prepared twophase transaction.""" if not is_prepared: await self.execute("XA END '%s'" % xid) await self.execute("XA COMMIT '%s'" % xid)	[ "async", "def", "commit_prepared", "(", "self", ",", "xid", ",", "*", ",", "is_prepared", "=", "True", ")", ":", "if", "not", "is_prepared", ":", "await", "self", ".", "execute", "(", "\"XA END '%s'\"", "%", "xid", ")", "await", "self", ".", "execute", ...	47.4	10.4
def _to_uniform_pwm(self, values): """ Convert raw pwm values to uniform values. :param values: The raw pwm values. :return: Converted, uniform pwm values (0.0-1.0). """ return [self._to_single_uniform_pwm(values[i]) for i in range(len(self._pins))]	[ "def", "_to_uniform_pwm", "(", "self", ",", "values", ")", ":", "return", "[", "self", ".", "_to_single_uniform_pwm", "(", "values", "[", "i", "]", ")", "for", "i", "in", "range", "(", "len", "(", "self", ".", "_pins", ")", ")", "]" ]	34	10.666667
def get_int_from_user(self, title="Enter integer value", cond_func=lambda i: i is not None): """Opens an integer entry dialog and returns integer Parameters ---------- title: String \tDialog title cond_func: Function \tIf cond_func of in...	[ "def", "get_int_from_user", "(", "self", ",", "title", "=", "\"Enter integer value\"", ",", "cond_func", "=", "lambda", "i", ":", "i", "is", "not", "None", ")", ":", "is_integer", "=", "False", "while", "not", "is_integer", ":", "dlg", "=", "wx", ".", "T...	24.138889	20.555556
def do_ls(self, subcmd, opts, folder=""): """${cmd_name}: list messages in the specified folder ${cmd_usage} ${cmd_option_list} SINCE can be used with epoch times, for example: md ls -s $(date '+%s') """ client = MdClient(self.maildir, filesystem=self.filesys...	[ "def", "do_ls", "(", "self", ",", "subcmd", ",", "opts", ",", "folder", "=", "\"\"", ")", ":", "client", "=", "MdClient", "(", "self", ".", "maildir", ",", "filesystem", "=", "self", ".", "filesystem", ")", "client", ".", "ls", "(", "foldername", "="...	34.222222	15.111111
def consult_hook(self, item_session: ItemSession, verdict: bool, reason: str, test_info: dict): '''Consult the scripting hook. Returns: tuple: (bool, str) ''' try: reasons = { 'filters': test_info['map'], 'reas...	[ "def", "consult_hook", "(", "self", ",", "item_session", ":", "ItemSession", ",", "verdict", ":", "bool", ",", "reason", ":", "str", ",", "test_info", ":", "dict", ")", ":", "try", ":", "reasons", "=", "{", "'filters'", ":", "test_info", "[", "'map'", ...	27.857143	19.952381
def parse_location(loc, default_port): ''' loc can be of the format http://<ip/domain>[:<port>] eg: http://localhost:8888 http://localhost/ return ip (str), port (int) >>> parse_location('http://localhost/', 6379) ('localhost', 6379) >>> parse_location('http://localhost:8888'...	[ "def", "parse_location", "(", "loc", ",", "default_port", ")", ":", "parsed", "=", "urlparse", "(", "loc", ")", "if", "':'", "in", "parsed", ".", "netloc", ":", "ip", ",", "port", "=", "parsed", ".", "netloc", ".", "split", "(", "':'", ")", "port", ...	24.681818	19.590909
def write_bed_with_trackline(bed, out, trackline, add_chr=False): """ Read a bed file and write a copy with a trackline. Here's a simple trackline example: 'track type=bed name="cool" description="A cool track."' Parameters ---------- bed : str Input bed file name. out : str ...	[ "def", "write_bed_with_trackline", "(", "bed", ",", "out", ",", "trackline", ",", "add_chr", "=", "False", ")", ":", "df", "=", "pd", ".", "read_table", "(", "bed", ",", "index_col", "=", "None", ",", "header", "=", "None", ")", "bt", "=", "pbt", "."...	33.36	19.84
def unread(thread, user): """ Check whether there are any unread messages for a particular thread for a user. """ return bool(thread.userthread_set.filter(user=user, unread=True))	[ "def", "unread", "(", "thread", ",", "user", ")", ":", "return", "bool", "(", "thread", ".", "userthread_set", ".", "filter", "(", "user", "=", "user", ",", "unread", "=", "True", ")", ")" ]	38.2	17.4
def get_message_definitions(self, msgid_or_symbol: str) -> list: """Returns the Message object for this message. :param str msgid_or_symbol: msgid_or_symbol may be either a numeric or symbolic id. :raises UnknownMessageError: if the message id is not defined. :rtype: List of MessageDefi...	[ "def", "get_message_definitions", "(", "self", ",", "msgid_or_symbol", ":", "str", ")", "->", "list", ":", "if", "msgid_or_symbol", "[", "1", ":", "]", ".", "isdigit", "(", ")", ":", "msgid_or_symbol", "=", "msgid_or_symbol", ".", "upper", "(", ")", "for",...	45.210526	19.315789
def get_or_none(cls, filter_kwargs): """ Returns a video or None. """ try: video = cls.objects.get(filter_kwargs) except cls.DoesNotExist: video = None return video	[ "def", "get_or_none", "(", "cls", ",", "", "", "filter_kwargs", ")", ":", "try", ":", "video", "=", "cls", ".", "objects", ".", "get", "(", "", "", "filter_kwargs", ")", "except", "cls", ".", "DoesNotExist", ":", "video", "=", "None", "return", "...	23.2	13.4
def init_original_response(self): """Get the original response for comparing, confirm is_cookie_necessary""" no_cookie_resp = None self.is_cookie_necessary = True if 'json' in self.request: self.request['data'] = json.dumps(self.request.pop('json')).encode( se...	[ "def", "init_original_response", "(", "self", ")", ":", "no_cookie_resp", "=", "None", "self", ".", "is_cookie_necessary", "=", "True", "if", "'json'", "in", "self", ".", "request", ":", "self", ".", "request", "[", "'data'", "]", "=", "json", ".", "dumps"...	47.259259	13.259259
def cli(ctx, feature_id, organism="", sequence=""): """Delete a feature Output: A standard apollo feature dictionary ({"features": [{...}]}) """ return ctx.gi.annotations.delete_feature(feature_id, organism=organism, sequence=sequence)	[ "def", "cli", "(", "ctx", ",", "feature_id", ",", "organism", "=", "\"\"", ",", "sequence", "=", "\"\"", ")", ":", "return", "ctx", ".", "gi", ".", "annotations", ".", "delete_feature", "(", "feature_id", ",", "organism", "=", "organism", ",", "sequence"...	30.75	25.25
def sample(self, nsims=1000): """ Samples from the posterior predictive distribution Parameters ---------- nsims : int (default : 1000) How many draws from the posterior predictive distribution Returns ---------- - np.ndarray of draws from the data ...	[ "def", "sample", "(", "self", ",", "nsims", "=", "1000", ")", ":", "if", "self", ".", "latent_variables", ".", "estimation_method", "not", "in", "[", "'BBVI'", ",", "'M-H'", "]", ":", "raise", "Exception", "(", "\"No latent variables estimated!\"", ")", "els...	43.894737	27.578947
def teetext(table, source=None, encoding=None, errors='strict', template=None, prologue=None, epilogue=None): """ Return a table that writes rows to a text file as they are iterated over. """ assert template is not None, 'template is required' return TeeTextView(table, source=source, e...	[ "def", "teetext", "(", "table", ",", "source", "=", "None", ",", "encoding", "=", "None", ",", "errors", "=", "'strict'", ",", "template", "=", "None", ",", "prologue", "=", "None", ",", "epilogue", "=", "None", ")", ":", "assert", "template", "is", ...	42.3	24.9
def get_request(self, request): """Get a list of DownloadRequests for all data that are under the given field in the table of a Geopedia layer. :return: list of items which have to be downloaded :rtype: list(DownloadRequest) """ request.layer = self._parse_layer(request.layer, r...	[ "def", "get_request", "(", "self", ",", "request", ")", ":", "request", ".", "layer", "=", "self", ".", "_parse_layer", "(", "request", ".", "layer", ",", "return_wms_name", "=", "True", ")", "return", "super", "(", ")", ".", "get_request", "(", "request...	41.888889	16.777778
def match_lang(self, el, langs): """Match languages.""" match = False has_ns = self.supports_namespaces() root = self.root has_html_namespace = self.has_html_namespace # Walk parents looking for `lang` (HTML) or `xml:lang` XML property. parent = el found...	[ "def", "match_lang", "(", "self", ",", "el", ",", "langs", ")", ":", "match", "=", "False", "has_ns", "=", "self", ".", "supports_namespaces", "(", ")", "root", "=", "self", ".", "root", "has_html_namespace", "=", "self", ".", "has_html_namespace", "# Walk...	39.694118	19.388235
def output_vm(gandi, vm, datacenters, output_keys, justify=10): """ Helper to output a vm information.""" output_generic(gandi, vm, output_keys, justify) if 'datacenter' in output_keys: for dc in datacenters: if dc['id'] == vm['datacenter_id']: dc_name = dc.get('dc_code'...	[ "def", "output_vm", "(", "gandi", ",", "vm", ",", "datacenters", ",", "output_keys", ",", "justify", "=", "10", ")", ":", "output_generic", "(", "gandi", ",", "vm", ",", "output_keys", ",", "justify", ")", "if", "'datacenter'", "in", "output_keys", ":", ...	34.47619	19.952381
def delete_item_list(self, item_list_url): """ Delete an Item List on the server :type item_list_url: String or ItemList :param item_list_url: the URL of the list to which to add the items, or an ItemList object :rtype: Boolean :returns: True if the item list was de...	[ "def", "delete_item_list", "(", "self", ",", "item_list_url", ")", ":", "try", ":", "resp", "=", "self", ".", "api_request", "(", "str", "(", "item_list_url", ")", ",", "method", "=", "\"DELETE\"", ")", "# all good if it says success", "if", "'success'", "in",...	31.153846	19.692308
def visit_NameConstant(self, node: AST, dfltChaining: bool = True) -> str: """Return `node`s name as string.""" return str(node.value)	[ "def", "visit_NameConstant", "(", "self", ",", "node", ":", "AST", ",", "dfltChaining", ":", "bool", "=", "True", ")", "->", "str", ":", "return", "str", "(", "node", ".", "value", ")" ]	49.333333	14.666667
def replace_seqres(self, pdb, update_atoms = True): """Replace SEQRES lines with a new sequence, optionally removing mutated sidechains""" newpdb = PDB() inserted_seqres = False entries_before_seqres = set(["HEADER", "OBSLTE", "TITLE", "CAVEAT", "COMPND", "SOURCE", ...	[ "def", "replace_seqres", "(", "self", ",", "pdb", ",", "update_atoms", "=", "True", ")", ":", "newpdb", "=", "PDB", "(", ")", "inserted_seqres", "=", "False", "entries_before_seqres", "=", "set", "(", "[", "\"HEADER\"", ",", "\"OBSLTE\"", ",", "\"TITLE\"", ...	33.391304	19.478261
def delete(self, template_name): """Delete a template""" template = db.Template.find_one(template_name=template_name) if not template: return self.make_response('No such template found', HTTP.NOT_FOUND) db.session.delete(template) db.session.commit() auditlog...	[ "def", "delete", "(", "self", ",", "template_name", ")", ":", "template", "=", "db", ".", "Template", ".", "find_one", "(", "template_name", "=", "template_name", ")", "if", "not", "template", ":", "return", "self", ".", "make_response", "(", "'No such templ...	38.928571	22
def send_invoice(self): """ Pay and send the customer's latest invoice. :returns: True if an invoice was able to be created and paid, False otherwise (typically if there was nothing to invoice). """ from .billing import Invoice try: invoice = Invoice._api_create(customer=self.id) invoice.pay() ...	[ "def", "send_invoice", "(", "self", ")", ":", "from", ".", "billing", "import", "Invoice", "try", ":", "invoice", "=", "Invoice", ".", "_api_create", "(", "customer", "=", "self", ".", "id", ")", "invoice", ".", "pay", "(", ")", "return", "True", "exce...	27.933333	21.4
def htmlListToTR(l,trClass=None,tdClass=None,td1Class=None): """ turns a list into a <tr><td>something</td></tr> call this when generating HTML tables dynamically. """ html="<tr>" for item in l: if 'array' in str(type(item)): item=item[0] #TODO: why is this needed htm...	[ "def", "htmlListToTR", "(", "l", ",", "trClass", "=", "None", ",", "tdClass", "=", "None", ",", "td1Class", "=", "None", ")", ":", "html", "=", "\"<tr>\"", "for", "item", "in", "l", ":", "if", "'array'", "in", "str", "(", "type", "(", "item", ")", ...	29.5	18.7
def parse_attr_signature(sig): """ Parse an attribute signature """ match = ATTR_SIG_RE.match(sig.strip()) if not match: raise RuntimeError('Attribute signature invalid, got ' + sig) name, _, params = match.groups() if params is not None and params.strip() != '': params = split_sig(p...	[ "def", "parse_attr_signature", "(", "sig", ")", ":", "match", "=", "ATTR_SIG_RE", ".", "match", "(", "sig", ".", "strip", "(", ")", ")", "if", "not", "match", ":", "raise", "RuntimeError", "(", "'Attribute signature invalid, got '", "+", "sig", ")", "name", ...	35.916667	14.25
def get_current_thread_id(thread): ''' Note: the difference from get_current_thread_id to get_thread_id is that for the current thread we can get the thread id while the thread.ident is still not set in the Thread instance. ''' try: # Fast path without getting lock. tid = thread....	[ "def", "get_current_thread_id", "(", "thread", ")", ":", "try", ":", "# Fast path without getting lock.", "tid", "=", "thread", ".", "__pydevd_id__", "if", "tid", "is", "None", ":", "# Fix for https://www.brainwy.com/tracker/PyDev/645", "# if __pydevd_id__ is None, recalculat...	41.277778	24.944444
def _execute_handler(self, p_command, p_todo_id=None, p_output=None): """ Executes a command, given as a string. """ p_output = p_output or self._output self._console_visible = False self._last_cmd = (p_command, p_output == self._output) try: p_comma...	[ "def", "_execute_handler", "(", "self", ",", "p_command", ",", "p_todo_id", "=", "None", ",", "p_output", "=", "None", ")", ":", "p_output", "=", "p_output", "or", "self", ".", "_output", "self", ".", "_console_visible", "=", "False", "self", ".", "_last_c...	30.946429	19.303571
def mesh_to_BVH(mesh): """ Create a BVHModel object from a Trimesh object Parameters ----------- mesh : Trimesh Input geometry Returns ------------ bvh : fcl.BVHModel BVH of input geometry """ bvh = fcl.BVHModel() bvh.beginModel(num_tris_=len(mesh.faces), ...	[ "def", "mesh_to_BVH", "(", "mesh", ")", ":", "bvh", "=", "fcl", ".", "BVHModel", "(", ")", "bvh", ".", "beginModel", "(", "num_tris_", "=", "len", "(", "mesh", ".", "faces", ")", ",", "num_vertices_", "=", "len", "(", "mesh", ".", "vertices", ")", ...	22.047619	17.47619
def forward_filter(self, x, mask=None): """Run a Kalman filter over a provided sequence of outputs. Note that the returned values `filtered_means`, `predicted_means`, and `observation_means` depend on the observed time series `x`, while the corresponding covariances are independent of the observed seri...	[ "def", "forward_filter", "(", "self", ",", "x", ",", "mask", "=", "None", ")", ":", "with", "tf", ".", "name_scope", "(", "\"forward_filter\"", ")", ":", "x", "=", "tf", ".", "convert_to_tensor", "(", "value", "=", "x", ",", "name", "=", "\"x\"", ")"...	50.009217	20.562212
def should_stale_item_be_fetched_synchronously(self, delta, args, *kwargs): """ Return whether to refresh an item synchronously when it is found in the cache but stale """ if self.fetch_on_stale_threshold is None: return False return delta > (self.fetch_on_s...	[ "def", "should_stale_item_be_fetched_synchronously", "(", "self", ",", "delta", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "if", "self", ".", "fetch_on_stale_threshold", "is", "None", ":", "return", "False", "return", "delta", ">", "(", "self", "."...	43	18.5
def flags(self, value): """ Setter for self.__flags attribute. :param value: Attribute value. :type value: int """ if value is not None: assert type(value) is int, "'{0}' attribute: '{1}' type is not 'int'!".format("flags", value) self.__flags = ...	[ "def", "flags", "(", "self", ",", "value", ")", ":", "if", "value", "is", "not", "None", ":", "assert", "type", "(", "value", ")", "is", "int", ",", "\"'{0}' attribute: '{1}' type is not 'int'!\"", ".", "format", "(", "\"flags\"", ",", "value", ")", "self"...	28.636364	19
def to_reminders(self, ical, label=None, priority=None, tags=None, tail=None, sep=" ", postdate=None, posttime=None): """Return Remind commands for all events of a iCalendar""" if not hasattr(ical, 'vevent_list'): return '' reminders = [self.to_remind(vevent, la...	[ "def", "to_reminders", "(", "self", ",", "ical", ",", "label", "=", "None", ",", "priority", "=", "None", ",", "tags", "=", "None", ",", "tail", "=", "None", ",", "sep", "=", "\" \"", ",", "postdate", "=", "None", ",", "posttime", "=", "None", ")",...	48.5	19.1
def beep(self): """Make dimmer beep. Not all devices support this""" self.logger.info("Dimmer %s beep", self.device_id) self.hub.direct_command(self.device_id, '30', '00') success = self.hub.check_success(self.device_id, '30', '00') return success	[ "def", "beep", "(", "self", ")", ":", "self", ".", "logger", ".", "info", "(", "\"Dimmer %s beep\"", ",", "self", ".", "device_id", ")", "self", ".", "hub", ".", "direct_command", "(", "self", ".", "device_id", ",", "'30'", ",", "'00'", ")", "success",...	31.333333	25.333333
def wrap_object(obj, decorator): """ Decorates the given object with the decorator function. If obj is a method, the method is decorated with the decorator function and returned. If obj is a class (i.e., a class based view), the methods in the class corresponding to HTTP methods will be decorated a...	[ "def", "wrap_object", "(", "obj", ",", "decorator", ")", ":", "actual_decorator", "=", "method_decorator", "(", "decorator", ")", "if", "inspect", ".", "isfunction", "(", "obj", ")", ":", "wrapped_obj", "=", "actual_decorator", "(", "obj", ")", "update_wrapper...	42.538462	21.307692
def fixpoint_runner(self): """Work list algorithm that runs the fixpoint algorithm.""" q = self.cfg.nodes while q != []: x_i = constraint_table[q[0]] # x_i = q[0].old_constraint self.analysis.fixpointmethod(q[0]) # y = F_i(x_1, ..., x_n); y = constraint_tab...	[ "def", "fixpoint_runner", "(", "self", ")", ":", "q", "=", "self", ".", "cfg", ".", "nodes", "while", "q", "!=", "[", "]", ":", "x_i", "=", "constraint_table", "[", "q", "[", "0", "]", "]", "# x_i = q[0].old_constraint", "self", ".", "analysis", ".", ...	43.928571	25
def add_tag(self, key, value=''): """ Add a tag to this object. Tag's are stored by AWS and can be used to organize and filter resources. Adding a tag involves a round-trip to the EC2 service. :type key: str :param key: The key or name of the tag being stored. ...	[ "def", "add_tag", "(", "self", ",", "key", ",", "value", "=", "''", ")", ":", "status", "=", "self", ".", "connection", ".", "create_tags", "(", "[", "self", ".", "id", "]", ",", "{", "key", ":", "value", "}", ")", "if", "self", ".", "tags", "i...	38.666667	20
def search_gallery(self, q): """Search the gallery with the given query string.""" url = self._base_url + "/3/gallery/search?q={0}".format(q) resp = self._send_request(url) return [_get_album_or_image(thing, self) for thing in resp]	[ "def", "search_gallery", "(", "self", ",", "q", ")", ":", "url", "=", "self", ".", "_base_url", "+", "\"/3/gallery/search?q={0}\"", ".", "format", "(", "q", ")", "resp", "=", "self", ".", "_send_request", "(", "url", ")", "return", "[", "_get_album_or_imag...	52	13.4
def _set_tasks_state(self, value): """ Purpose: Set state of all tasks of the current stage. :arguments: String """ if value not in states.state_numbers.keys(): raise ValueError(obj=self._uid, attribute='set_tasks_state', ...	[ "def", "_set_tasks_state", "(", "self", ",", "value", ")", ":", "if", "value", "not", "in", "states", ".", "state_numbers", ".", "keys", "(", ")", ":", "raise", "ValueError", "(", "obj", "=", "self", ".", "_uid", ",", "attribute", "=", "'set_tasks_state'...	34.071429	15.071429
def _merge_relative_path(dst_path, rel_path): """Merge a relative tar file to a destination (which can be "gs://...").""" # Convert rel_path to be relative and normalize it to remove ".", "..", "//", # which are valid directories in fileystems like "gs://". norm_rel_path = os.path.normpath(rel_path.lstrip("/"))...	[ "def", "_merge_relative_path", "(", "dst_path", ",", "rel_path", ")", ":", "# Convert rel_path to be relative and normalize it to remove \".\", \"..\", \"//\",", "# which are valid directories in fileystems like \"gs://\".", "norm_rel_path", "=", "os", ".", "path", ".", "normpath", ...	40.05	22.1
def length_from_nodelist(self, nodelist): """Returns the route length (cost) from the first to the last node in nodelist""" cost = 0 for n1, n2 in zip(nodelist[0:len(nodelist) - 1], nodelist[1:len(nodelist)]): cost += self._problem.distance(n1, n2) return cost	[ "def", "length_from_nodelist", "(", "self", ",", "nodelist", ")", ":", "cost", "=", "0", "for", "n1", ",", "n2", "in", "zip", "(", "nodelist", "[", "0", ":", "len", "(", "nodelist", ")", "-", "1", "]", ",", "nodelist", "[", "1", ":", "len", "(", ...	37.375	22.5
def create(self, request, project): """ POST method implementation """ JobNote.objects.create( job=Job.objects.get(repository__name=project, id=int(request.data['job_id'])), failure_classification_id=int(request.data['failure_classi...	[ "def", "create", "(", "self", ",", "request", ",", "project", ")", ":", "JobNote", ".", "objects", ".", "create", "(", "job", "=", "Job", ".", "objects", ".", "get", "(", "repository__name", "=", "project", ",", "id", "=", "int", "(", "request", ".",...	34.125	15.875
def instruction_ROL_memory(self, opcode, ea, m): """ Rotate memory left """ r = self.ROL(m) # log.debug("$%x ROL memory value $%x << 1 \| Carry = $%x and write it to $%x \t\| %s" % ( # self.program_counter, # m, r, ea, # self.cfg.mem_info.get_shortest(ea) # )...	[ "def", "instruction_ROL_memory", "(", "self", ",", "opcode", ",", "ea", ",", "m", ")", ":", "r", "=", "self", ".", "ROL", "(", "m", ")", "# log.debug(\"$%x ROL memory value $%x << 1 \| Carry = $%x and write it to $%x \\t\| %s\" % (", "# self.program_counter,...	37.888889	17
def get_protein_data(peptide, pdata, headerfields, accfield): """These fields are currently not pool dependent so headerfields is ignored""" report = get_proteins(peptide, pdata, headerfields) return get_cov_descriptions(peptide, pdata, report)	[ "def", "get_protein_data", "(", "peptide", ",", "pdata", ",", "headerfields", ",", "accfield", ")", ":", "report", "=", "get_proteins", "(", "peptide", ",", "pdata", ",", "headerfields", ")", "return", "get_cov_descriptions", "(", "peptide", ",", "pdata", ",",...	51.2	10.2
def comment_count(object): """ Usage: {% comment_count obj %} or {% comment_count obj as var %} """ return Comment.objects.filter( object_id=object.pk, content_type=ContentType.objects.get_for_model(object) ).count()	[ "def", "comment_count", "(", "object", ")", ":", "return", "Comment", ".", "objects", ".", "filter", "(", "object_id", "=", "object", ".", "pk", ",", "content_type", "=", "ContentType", ".", "objects", ".", "get_for_model", "(", "object", ")", ")", ".", ...	23.818182	14.181818
def tagrefs(self): """Get the tags and reference numbers of all the vgroup members. Args:: no argument Returns:: list of (tag,ref) tuples, one for each vgroup member C library equivalent : Vgettagrefs ...	[ "def", "tagrefs", "(", "self", ")", ":", "n", "=", "self", ".", "_nmembers", "ret", "=", "[", "]", "if", "n", ":", "tags", "=", "_C", ".", "array_int32", "(", "n", ")", "refs", "=", "_C", ".", "array_int32", "(", "n", ")", "k", "=", "_C", "."...	26.12	21.16
def use_plenary_gradebook_view(self): """Pass through to provider GradeSystemGradebookSession.use_plenary_gradebook_view""" self._gradebook_view = PLENARY # self._get_provider_session('grade_system_gradebook_session') # To make sure the session is tracked for session in self._get_provide...	[ "def", "use_plenary_gradebook_view", "(", "self", ")", ":", "self", ".", "_gradebook_view", "=", "PLENARY", "# self._get_provider_session('grade_system_gradebook_session') # To make sure the session is tracked", "for", "session", "in", "self", ".", "_get_provider_sessions", "(", ...	50.111111	16.444444
def get_resource(self, device_id, resource_path): """Get a resource. :param str device_id: ID of the device (Required) :param str path: Path of the resource to get (Required) :returns: Device resource :rtype Resource """ resources = self.list_resources(device_id...	[ "def", "get_resource", "(", "self", ",", "device_id", ",", "resource_path", ")", ":", "resources", "=", "self", ".", "list_resources", "(", "device_id", ")", "for", "r", "in", "resources", ":", "if", "r", ".", "path", "==", "resource_path", ":", "return", ...	32.5	14.714286
def buckingham_potential(self, structure, val_dict=None): """ Generate species, buckingham, and spring options for an oxide structure using the parameters in default libraries. Ref: 1. G.V. Lewis and C.R.A. Catlow, J. Phys. C: Solid State Phys., 18, 1149-1161 ...	[ "def", "buckingham_potential", "(", "self", ",", "structure", ",", "val_dict", "=", "None", ")", ":", "if", "not", "val_dict", ":", "try", ":", "#If structure is oxidation state decorated, use that first.", "el", "=", "[", "site", ".", "specie", ".", "symbol", "...	39.471429	14.442857
def process_superclass(self, entity: List[dict]) -> List[dict]: """ Replaces ILX ID with superclass ID """ superclass = entity.pop('superclass') label = entity['label'] if not superclass.get('ilx_id'): raise self.SuperClassDoesNotExistError( f'Superclass not g...	[ "def", "process_superclass", "(", "self", ",", "entity", ":", "List", "[", "dict", "]", ")", "->", "List", "[", "dict", "]", ":", "superclass", "=", "entity", ".", "pop", "(", "'superclass'", ")", "label", "=", "entity", "[", "'label'", "]", "if", "n...	52.714286	16.428571
def setRandomParams(self): """ set random hyperparameters """ params = sp.randn(self.getNumberParams()) self.setParams(params)	[ "def", "setRandomParams", "(", "self", ")", ":", "params", "=", "sp", ".", "randn", "(", "self", ".", "getNumberParams", "(", ")", ")", "self", ".", "setParams", "(", "params", ")" ]	26.833333	6.5
def list_from_metadata(cls, url, metadata): '''return a list of DatalakeRecords for the url and metadata''' key = cls._get_key(url) metadata = Metadata(**metadata) ct = cls._get_create_time(key) time_buckets = cls.get_time_buckets_from_metadata(metadata) return [cls(url, ...	[ "def", "list_from_metadata", "(", "cls", ",", "url", ",", "metadata", ")", ":", "key", "=", "cls", ".", "_get_key", "(", "url", ")", "metadata", "=", "Metadata", "(", "", "", "metadata", ")", "ct", "=", "cls", ".", "_get_create_time", "(", "key", "...	51.857143	15.285714
def _get_enum(self, source, bitarray): ''' Get enum value, based on the data in XML ''' raw_value = self._get_raw(source, bitarray) # Find value description. value_desc = source.find('item', {'value': str(raw_value)}) or self._get_rangeitem(source, raw_value) return { ...	[ "def", "_get_enum", "(", "self", ",", "source", ",", "bitarray", ")", ":", "raw_value", "=", "self", ".", "_get_raw", "(", "source", ",", "bitarray", ")", "# Find value description.", "value_desc", "=", "source", ".", "find", "(", "'item'", ",", "{", "'val...	38.4	22.266667
def get_object(self, queryset=None): """ Implement cache on ``get_object`` method to avoid repetitive calls, in POST. """ if self._cached_object is None: self._cached_object = super(EntryCacheMixin, self).get_object( queryset) return self._cach...	[ "def", "get_object", "(", "self", ",", "queryset", "=", "None", ")", ":", "if", "self", ".", "_cached_object", "is", "None", ":", "self", ".", "_cached_object", "=", "super", "(", "EntryCacheMixin", ",", "self", ")", ".", "get_object", "(", "queryset", "...	35.666667	7.888889
def proxy_schema(self): """ Get the Proxy-Schema option of a request. :return: the Proxy-Schema values or None if not specified by the request :rtype : String """ for option in self.options: if option.number == defines.OptionRegistry.PROXY_SCHEME.number: ...	[ "def", "proxy_schema", "(", "self", ")", ":", "for", "option", "in", "self", ".", "options", ":", "if", "option", ".", "number", "==", "defines", ".", "OptionRegistry", ".", "PROXY_SCHEME", ".", "number", ":", "return", "option", ".", "value", "return", ...	32.818182	17.181818
def is_string(val): """Determines whether the passed value is a string, safe for 2/3.""" try: basestring except NameError: return isinstance(val, str) return isinstance(val, basestring)	[ "def", "is_string", "(", "val", ")", ":", "try", ":", "basestring", "except", "NameError", ":", "return", "isinstance", "(", "val", ",", "str", ")", "return", "isinstance", "(", "val", ",", "basestring", ")" ]	30.142857	14.428571
def build_signature(self, user_api_key, user_secret, request): """Return the signature for the request.""" path = request.get_full_path() sent_signature = request.META.get( self.header_canonical('Authorization')) signature_headers = self.get_headers_from_signature(sent_signat...	[ "def", "build_signature", "(", "self", ",", "user_api_key", ",", "user_secret", ",", "request", ")", ":", "path", "=", "request", ".", "get_full_path", "(", ")", "sent_signature", "=", "request", ".", "META", ".", "get", "(", "self", ".", "header_canonical",...	48.5	16.285714
def lookup_key(self): """Build a key from the "important" parts of a selector: elements, classes, ids. """ parts = set() for node in self.simple_selectors: for token in node.tokens: if token[0] not in ':[': parts.add(token) ...	[ "def", "lookup_key", "(", "self", ")", ":", "parts", "=", "set", "(", ")", "for", "node", "in", "self", ".", "simple_selectors", ":", "for", "token", "in", "node", ".", "tokens", ":", "if", "token", "[", "0", "]", "not", "in", "':['", ":", "parts",...	34.647059	16.117647
def head_account(self, headers=None, query=None, cdn=False): """ HEADs the account and returns the results. Useful headers returned are: =========================== ================================= x-account-bytes-used Object storage used for the ...	[ "def", "head_account", "(", "self", ",", "headers", "=", "None", ",", "query", "=", "None", ",", "cdn", "=", "False", ")", ":", "return", "self", ".", "request", "(", "'HEAD'", ",", "''", ",", "''", ",", "headers", ",", "query", "=", "query", ",", ...	43.657143	22.228571
def multiloss(losses, logging_namespace="multiloss", exclude_from_weighting=[]): """ Create a loss from multiple losses my mixing them. This multi-loss implementation is inspired by the Paper "Multi-Task Learning Using Uncertainty to Weight Losses for Scene Geometry and Semantics" by Kendall, Gal and Ci...	[ "def", "multiloss", "(", "losses", ",", "logging_namespace", "=", "\"multiloss\"", ",", "exclude_from_weighting", "=", "[", "]", ")", ":", "with", "tf", ".", "variable_scope", "(", "logging_namespace", ")", ":", "sum_loss", "=", "0", "for", "loss_name", ",", ...	50.842105	22.842105
def list_users(self, instance, limit=None, marker=None): """Returns all users for the specified instance.""" return instance.list_users(limit=limit, marker=marker)	[ "def", "list_users", "(", "self", ",", "instance", ",", "limit", "=", "None", ",", "marker", "=", "None", ")", ":", "return", "instance", ".", "list_users", "(", "limit", "=", "limit", ",", "marker", "=", "marker", ")" ]	59	12.666667
def infix(*kinds): """Decorate a method as handling infix tokens of the given kinds""" def wrap(fn): try: fn.infix_kinds.extend(kinds) except AttributeError: fn.infix_kinds = list(kinds) return fn return wrap	[ "def", "infix", "(", "*", "kinds", ")", ":", "def", "wrap", "(", "fn", ")", ":", "try", ":", "fn", ".", "infix_kinds", ".", "extend", "(", "kinds", ")", "except", "AttributeError", ":", "fn", ".", "infix_kinds", "=", "list", "(", "kinds", ")", "ret...	28.888889	14.555556
def wif(self, is_compressed=None): """ Return the WIF representation of this key, if available. """ secret_exponent = self.secret_exponent() if secret_exponent is None: return None if is_compressed is None: is_compressed = self.is_compressed() ...	[ "def", "wif", "(", "self", ",", "is_compressed", "=", "None", ")", ":", "secret_exponent", "=", "self", ".", "secret_exponent", "(", ")", "if", "secret_exponent", "is", "None", ":", "return", "None", "if", "is_compressed", "is", "None", ":", "is_compressed",...	34.461538	8.769231
def stop(self, timeout = 10.0): """ Send all pending messages, close connection. Returns True if no message left to sent. False if dirty. - timeout: seconds to wait for sending remaining messages. disconnect immedately if None. """ if (self._send_greenlet is not None) and \ (self._send_queue.qsiz...	[ "def", "stop", "(", "self", ",", "timeout", "=", "10.0", ")", ":", "if", "(", "self", ".", "_send_greenlet", "is", "not", "None", ")", "and", "(", "self", ".", "_send_queue", ".", "qsize", "(", ")", ">", "0", ")", ":", "self", ".", "wait_send", "...	30.913043	11.26087
def get_data_view_service_status(self, data_view_id): """ Retrieves the status for all of the services associated with a data view: - predict - experimental_design - data_reports - model_reports :param data_view_id: The ID number of the data view ...	[ "def", "get_data_view_service_status", "(", "self", ",", "data_view_id", ")", ":", "url", "=", "\"data_views/{}/status\"", ".", "format", "(", "data_view_id", ")", "response", "=", "self", ".", "_get", "(", "url", ")", ".", "json", "(", ")", "result", "=", ...	37.923077	21.461538
def matrix_directed_unweighted(user): """ Returns a directed, unweighted matrix where an edge exists if there is at least one call or text. """ matrix = _interaction_matrix(user, interaction=None) for a in range(len(matrix)): for b in range(len(matrix)): if matrix[a][b] is no...	[ "def", "matrix_directed_unweighted", "(", "user", ")", ":", "matrix", "=", "_interaction_matrix", "(", "user", ",", "interaction", "=", "None", ")", "for", "a", "in", "range", "(", "len", "(", "matrix", ")", ")", ":", "for", "b", "in", "range", "(", "l...	32.416667	14.416667
def check_if_branch_exist(db, root_hash, key_prefix): """ Given a key prefix, return whether this prefix is the prefix of an existing key in the trie. """ validate_is_bytes(key_prefix) return _check_if_branch_exist(db, root_hash, encode_to_bin(key_prefix))	[ "def", "check_if_branch_exist", "(", "db", ",", "root_hash", ",", "key_prefix", ")", ":", "validate_is_bytes", "(", "key_prefix", ")", "return", "_check_if_branch_exist", "(", "db", ",", "root_hash", ",", "encode_to_bin", "(", "key_prefix", ")", ")" ]	34.25	14.25
def _on_changed(self): """ Update the tree items """ self._updating = True to_collapse = [] self.clear() if self._editor and self._outline_mode and self._folding_panel: items, to_collapse = self.to_tree_widget_items( self._outline_mode....	[ "def", "_on_changed", "(", "self", ")", ":", "self", ".", "_updating", "=", "True", "to_collapse", "=", "[", "]", "self", ".", "clear", "(", ")", "if", "self", ".", "_editor", "and", "self", ".", "_outline_mode", "and", "self", ".", "_folding_panel", "...	33.962963	13.592593
async def request(self, method, url, query_params=None, headers=None, body=None, post_params=None, _preload_content=True, _request_timeout=None): """Execute request :param method: http request method :param url: http request url :param query_p...	[ "async", "def", "request", "(", "self", ",", "method", ",", "url", ",", "query_params", "=", "None", ",", "headers", "=", "None", ",", "body", "=", "None", ",", "post_params", "=", "None", ",", "_preload_content", "=", "True", ",", "_request_timeout", "=...	41.520408	18.591837
def to_text(self, tree, force_root=False): """ Extract text from tags. Skip any selectors specified and include attributes if specified. Ignored tags will not have their attributes scanned either. """ self.extract_tag_metadata(tree) text = [] attributes...	[ "def", "to_text", "(", "self", ",", "tree", ",", "force_root", "=", "False", ")", ":", "self", ".", "extract_tag_metadata", "(", "tree", ")", "text", "=", "[", "]", "attributes", "=", "[", "]", "comments", "=", "[", "]", "blocks", "=", "[", "]", "i...	40.666667	17.933333
def is_installable_file(path): # type: (PipfileType) -> bool """Determine if a path can potentially be installed""" from packaging import specifiers if isinstance(path, Mapping): path = convert_entry_to_path(path) # If the string starts with a valid specifier operator, test if it is a vali...	[ "def", "is_installable_file", "(", "path", ")", ":", "# type: (PipfileType) -> bool", "from", "packaging", "import", "specifiers", "if", "isinstance", "(", "path", ",", "Mapping", ")", ":", "path", "=", "convert_entry_to_path", "(", "path", ")", "# If the string sta...	33.880952	21.738095
def simple_write(self, s, frame, node=None): """Simple shortcut for start_write + write + end_write.""" self.start_write(frame, node) self.write(s) self.end_write(frame)	[ "def", "simple_write", "(", "self", ",", "s", ",", "frame", ",", "node", "=", "None", ")", ":", "self", ".", "start_write", "(", "frame", ",", "node", ")", "self", ".", "write", "(", "s", ")", "self", ".", "end_write", "(", "frame", ")" ]	39.4	7.4
def get_resource(self): """Return the associated resource.""" references = {"resource_id": None, "parent_id": None, "grandparent_id": None} for model_cls, regexp in self._regexp.iteritems(): match = regexp.search(self.resource_ref) if match is not No...	[ "def", "get_resource", "(", "self", ")", ":", "references", "=", "{", "\"resource_id\"", ":", "None", ",", "\"parent_id\"", ":", "None", ",", "\"grandparent_id\"", ":", "None", "}", "for", "model_cls", ",", "regexp", "in", "self", ".", "_regexp", ".", "ite...	46.5	16.75
def _fix_channels(self, op, attrs, inputs): """A workaround for getting 'channels' or 'units' since onnx don't provide these attributes. We check the shape of weights provided to get the number. """ if op not in [mx.sym.Convolution, mx.sym.Deconvolution, mx.sym.FullyConnected]: ...	[ "def", "_fix_channels", "(", "self", ",", "op", ",", "attrs", ",", "inputs", ")", ":", "if", "op", "not", "in", "[", "mx", ".", "sym", ".", "Convolution", ",", "mx", ".", "sym", ".", "Deconvolution", ",", "mx", ".", "sym", ".", "FullyConnected", "]...	51.16	20.72
def __validation_property_range(self, p): """ if p.sub_property_of(q) then for every y in included_ranges(p) we have y is subclass of some r in included_ranges(q) -- for object properties """ for y in p.included_ranges(): superclasses = y.super_classes_closure...	[ "def", "__validation_property_range", "(", "self", ",", "p", ")", ":", "for", "y", "in", "p", ".", "included_ranges", "(", ")", ":", "superclasses", "=", "y", ".", "super_classes_closure", "(", ")", "for", "q", "in", "p", ".", "super_properties", "(", ")...	56.857143	22
def save(self, **kwargs): """Overrides models.Model.save. - Generates slug. - Saves image file. """ if not self.width or not self.height: self.width, self.height = self.image.width, self.image.height # prefill the slug with the ID, it requires double save ...	[ "def", "save", "(", "self", ",", "", "", "kwargs", ")", ":", "if", "not", "self", ".", "width", "or", "not", "self", ".", "height", ":", "self", ".", "width", ",", "self", ".", "height", "=", "self", ".", "image", ".", "width", ",", "self", "...	36.418605	18.27907
def _link_to_img(self): """ Generates a link to the user's Gravatar. >>> Gravatar('gridaphobe@gmail.com')._link_to_img() 'http://www.gravatar.com/avatar/16b87da510d278999c892cdbdd55c1b6?s=80&r=g' """ # make sure options are valid if self.rating.lower() no...	[ "def", "_link_to_img", "(", "self", ")", ":", "# make sure options are valid", "if", "self", ".", "rating", ".", "lower", "(", ")", "not", "in", "RATINGS", ":", "raise", "InvalidRatingError", "(", "self", ".", "rating", ")", "if", "not", "(", "MIN_SIZE", "...	32.791667	15.208333
def to_json(self): ''' Returns the JSON representation of this graph. ''' roots = [] for r in self.roots: roots.append(r.to_json()) return {'roots': roots}	[ "def", "to_json", "(", "self", ")", ":", "roots", "=", "[", "]", "for", "r", "in", "self", ".", "roots", ":", "roots", ".", "append", "(", "r", ".", "to_json", "(", ")", ")", "return", "{", "'roots'", ":", "roots", "}" ]	32.333333	15
def block_resource_fitnesses(self, block: block.Block): """Returns a map of nodename to average fitness value for this block. Assumes that required resources have been checked on all nodes.""" # Short-circuit! My algorithm is terrible, so it doesn't work well for the edge case where # t...	[ "def", "block_resource_fitnesses", "(", "self", ",", "block", ":", "block", ".", "Block", ")", ":", "# Short-circuit! My algorithm is terrible, so it doesn't work well for the edge case where", "# the block has no requirements", "if", "not", "block", ".", "resources", ":", "r...	35.555556	21.240741
def get_groupnames(self, sgs): """Get servicegroups list :return: comma separated list of servicegroups :rtype: str """ return ','.join([sgs[sg].get_name() for sg in self.servicegroups])	[ "def", "get_groupnames", "(", "self", ",", "sgs", ")", ":", "return", "','", ".", "join", "(", "[", "sgs", "[", "sg", "]", ".", "get_name", "(", ")", "for", "sg", "in", "self", ".", "servicegroups", "]", ")" ]	31.571429	17
def _check_and_change_state_before_execution( self, verbose=True, ignore_all_deps=False, ignore_depends_on_past=False, ignore_task_deps=False, ignore_ti_state=False, mark_success=False, test_mode=False, job_id=No...	[ "def", "_check_and_change_state_before_execution", "(", "self", ",", "verbose", "=", "True", ",", "ignore_all_deps", "=", "False", ",", "ignore_depends_on_past", "=", "False", ",", "ignore_task_deps", "=", "False", ",", "ignore_ti_state", "=", "False", ",", "mark_su...	39.954887	18.195489
def dumpu(self, data, url, kwargs): """ opens url and passes to load() kwargs are passed to both open and dump """ return self.dump(data, self.open(url, 'w', kwargs), **kwargs)	[ "def", "dumpu", "(", "self", ",", "data", ",", "url", ",", "", "", "kwargs", ")", ":", "return", "self", ".", "dump", "(", "data", ",", "self", ".", "open", "(", "url", ",", "'w'", ",", "", "", "kwargs", ")", ",", "", "", "kwargs", ")" ...	35.833333	7.166667
def child_done(self, task, result, count): """Acquire the condition variable for the compound task object. Decrement the thread count. If we are the last thread to finish, release compound task thread, which is blocked in execute(). """ with self.regcond: self.logger...	[ "def", "child_done", "(", "self", ",", "task", ",", "result", ",", "count", ")", ":", "with", "self", ".", "regcond", ":", "self", ".", "logger", ".", "debug", "(", "'Concurrent task %d/%d has completed'", "%", "(", "self", ".", "count", ",", "self", "."...	45.785714	11.214286
def fit_results_to_dict(fit_results, min_bound=None, max_bound=None): '''Create a JSON-comparable dict from a FitResults object Parameters: fit_results (FitResults): object containing fit parameters,\ errors and type min_bound: optional min value to add to dictionary if min isn't\ ...	[ "def", "fit_results_to_dict", "(", "fit_results", ",", "min_bound", "=", "None", ",", "max_bound", "=", "None", ")", ":", "type_map", "=", "{", "'norm'", ":", "'normal'", ",", "'expon'", ":", "'exponential'", ",", "'uniform'", ":", "'uniform'", "}", "param_m...	35.59375	25.96875
def _itraj(self, value): """ Reader-internal property that tracks the upcoming trajectory index. Should not be used within iterator loop. Parameters ---------- value : int The upcoming trajectory index. """ if value != self._selected_itraj: ...	[ "def", "_itraj", "(", "self", ",", "value", ")", ":", "if", "value", "!=", "self", ".", "_selected_itraj", ":", "self", ".", "state", ".", "itraj", "=", "value", "# TODO: this side effect is unexpected.", "self", ".", "state", ".", "t", "=", "0" ]	34.583333	15.583333
def add_to_group(self, group, user): """ Add a user to a group :type user: str :param user: User's email :type group: str :param group: Group name :rtype: dict :return: an empty dictionary """ data = {'group': group, 'user': user} ...	[ "def", "add_to_group", "(", "self", ",", "group", ",", "user", ")", ":", "data", "=", "{", "'group'", ":", "group", ",", "'user'", ":", "user", "}", "return", "self", ".", "post", "(", "'addUserToGroup'", ",", "data", ")" ]	23.2	14.666667
def pickle_matpower_cases(case_paths, case_format=2): """ Parses the MATPOWER case files at the given paths and pickles the resulting Case objects to the same directory. """ import pylon.io if isinstance(case_paths, basestring): case_paths = [case_paths] for case_path in case_paths...	[ "def", "pickle_matpower_cases", "(", "case_paths", ",", "case_format", "=", "2", ")", ":", "import", "pylon", ".", "io", "if", "isinstance", "(", "case_paths", ",", "basestring", ")", ":", "case_paths", "=", "[", "case_paths", "]", "for", "case_path", "in", ...	38.571429	17.428571
def delete_item(self, item): """Delete an object in DynamoDB. :param item: Unpacked into kwargs for :func:`boto3.DynamoDB.Client.delete_item`. :raises bloop.exceptions.ConstraintViolation: if the condition (or atomic) is not met. """ try: self.dynamodb_client.delete_...	[ "def", "delete_item", "(", "self", ",", "item", ")", ":", "try", ":", "self", ".", "dynamodb_client", ".", "delete_item", "(", "", "", "item", ")", "except", "botocore", ".", "exceptions", ".", "ClientError", "as", "error", ":", "handle_constraint_violatio...	42.7	21.6
def aggregation_result_extractor(impact_report, component_metadata): """Extracting aggregation result of breakdown from the impact layer. :param impact_report: the impact report that acts as a proxy to fetch all the data that extractor needed :type impact_report: safe.report.impact_report.ImpactRep...	[ "def", "aggregation_result_extractor", "(", "impact_report", ",", "component_metadata", ")", ":", "context", "=", "{", "}", "\"\"\"Initializations.\"\"\"", "extra_args", "=", "component_metadata", ".", "extra_args", "# Find out aggregation report type", "analysis_layer", "=",...	36.586777	17.520661
def residue_network(): """The network for the residue example. Current and previous state are all nodes OFF. Diagram:: +~~~~~~~+ +~~~~~~~+ \| A \| \| B \| +~~>\| (AND) \| \| (AND) \|<~~+ \| +~~~~~~~+ +~~~~~~~+ \| ...	[ "def", "residue_network", "(", ")", ":", "tpm", "=", "np", ".", "array", "(", "[", "[", "int", "(", "s", ")", "for", "s", "in", "bin", "(", "x", ")", "[", "2", ":", "]", ".", "zfill", "(", "5", ")", "[", ":", ":", "-", "1", "]", "]", "f...	31.469388	16.489796
def grab_idx(x,i,batch_first:bool=True): "Grab the `i`-th batch in `x`, `batch_first` stating the batch dimension." if batch_first: return ([o[i].cpu() for o in x] if is_listy(x) else x[i].cpu()) else: return ([o[:,i].cpu() for o in x] if is_listy(x) else x[:,i].cpu())	[ "def", "grab_idx", "(", "x", ",", "i", ",", "batch_first", ":", "bool", "=", "True", ")", ":", "if", "batch_first", ":", "return", "(", "[", "o", "[", "i", "]", ".", "cpu", "(", ")", "for", "o", "in", "x", "]", "if", "is_listy", "(", "x", ")"...	72.5	32.5
def getConParams(virtualhost): """ Connection object builder. Args: virtualhost (str): selected virtualhost in rabbitmq Returns: pika.ConnectionParameters: object filled by `constants` from :class:`edeposit.amqp.settings`. """ return pika.ConnectionParameters( h...	[ "def", "getConParams", "(", "virtualhost", ")", ":", "return", "pika", ".", "ConnectionParameters", "(", "host", "=", "settings", ".", "RABBITMQ_HOST", ",", "port", "=", "int", "(", "settings", ".", "RABBITMQ_PORT", ")", ",", "virtual_host", "=", "virtualhost"...	27.4	14.6
def initialize_library(self, library, lib_type=VERSION_STORE, **kwargs): """ Create an Arctic Library or a particular type. Parameters ---------- library : `str` The name of the library. e.g. 'library' or 'user.library' lib_type : `str` The type ...	[ "def", "initialize_library", "(", "self", ",", "library", ",", "lib_type", "=", "VERSION_STORE", ",", "", "", "kwargs", ")", ":", "lib", "=", "ArcticLibraryBinding", "(", "self", ",", "library", ")", "# check that we don't create too many namespaces", "# can be di...	45.580645	25
def execute(self, command, args, *kw): """Executes redis command in a free connection and returns future waiting for result. Picks connection from free pool and send command through that connection. If no connection is found, returns coroutine waiting for free connecti...	[ "def", "execute", "(", "self", ",", "command", ",", "", "args", ",", "", "*", "kw", ")", ":", "conn", ",", "address", "=", "self", ".", "get_connection", "(", "command", ",", "args", ")", "if", "conn", "is", "not", "None", ":", "fut", "=", "con...	42.8125	15.625
def unregisterMachine(self, machineName): """ This operation unregisters a portal machine from a portal site. The operation can only performed when there are two machines participating in a portal site. """ url = self._url + "/machines/unregister" params = { ...	[ "def", "unregisterMachine", "(", "self", ",", "machineName", ")", ":", "url", "=", "self", ".", "_url", "+", "\"/machines/unregister\"", "params", "=", "{", "\"f\"", ":", "\"json\"", ",", "\"machineName\"", ":", "machineName", "}", "return", "self", ".", "_p...	37.6	11.6
def create(cls, collection): """ Creates document object without really creating it in the collection. :param collection Collection instance :returns Document """ api = Client.instance().api doc = Document( id='', key='', ...	[ "def", "create", "(", "cls", ",", "collection", ")", ":", "api", "=", "Client", ".", "instance", "(", ")", ".", "api", "doc", "=", "Document", "(", "id", "=", "''", ",", "key", "=", "''", ",", "collection", "=", "collection", ".", "name", ",", "a...	20.526316	21.684211

def _configure_buffer_sizes(): """Set up module globals controlling buffer sizes""" global PIPE_BUF_BYTES global OS_PIPE_SZ PIPE_BUF_BYTES = 65536 OS_PIPE_SZ = None # Teach the 'fcntl' module about 'F_SETPIPE_SZ', which is a Linux-ism, # but a good one that can drastically reduce the numbe...

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36.296296

20.592593

def _compute_projection_pick(artist, path, xy): """ Project *xy* on *path* to obtain a `Selection` for *artist*. *path* is first transformed to screen coordinates using the artist transform, and the target of the returned `Selection` is transformed back to data coordinates using the artist *axes* i...

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44.865385

20.288462

def tx_xml(self): """ Return the ``<c:tx>`` (tx is short for 'text') element for this series as unicode text. This element contains the series name. """ return self._tx_tmpl.format(**{ 'wksht_ref': self._series.name_ref, 'series_name': self.name, ...

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34.5

13.7

def close(self): """ Mark the scope as closed, i.e. all symbols have been declared, and no further declarations should be done. """ if self._closed: raise ValueError('scope is already marked as closed') # By letting parent know which symbols this scope has l...

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34.1875

21.5625

def path_to_ls(fn): """ Converts an absolute path to an entry resembling the output of the ls command on most UNIX systems.""" st = os.stat(fn) full_mode = 'rwxrwxrwx' mode = '' file_time = '' d = '' for i in range(9): # Incrementally builds up the 9 character string, using c...

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45.8125

24.625

def estimate_cpd(self, node): """ Method to estimate the CPD for a given variable. Parameters ---------- node: int, string (any hashable python object) The name of the variable for which the CPD is to be estimated. Returns ------- CPD: Tabula...

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37.410714

19.696429

async def commit_prepared(self, xid, *, is_prepared=True): """Commit prepared twophase transaction.""" if not is_prepared: await self.execute("XA END '%s'" % xid) await self.execute("XA COMMIT '%s'" % xid)

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47.4

10.4

def _to_uniform_pwm(self, values): """ Convert raw pwm values to uniform values. :param values: The raw pwm values. :return: Converted, uniform pwm values (0.0-1.0). """ return [self._to_single_uniform_pwm(values[i]) for i in range(len(self._pins))]

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34

10.666667

def get_int_from_user(self, title="Enter integer value", cond_func=lambda i: i is not None): """Opens an integer entry dialog and returns integer Parameters ---------- title: String \tDialog title cond_func: Function \tIf cond_func of in...

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24.138889

20.555556

def do_ls(self, subcmd, opts, folder=""): """${cmd_name}: list messages in the specified folder ${cmd_usage} ${cmd_option_list} SINCE can be used with epoch times, for example: md ls -s $(date '+%s') """ client = MdClient(self.maildir, filesystem=self.filesys...

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34.222222

15.111111

def consult_hook(self, item_session: ItemSession, verdict: bool, reason: str, test_info: dict): '''Consult the scripting hook. Returns: tuple: (bool, str) ''' try: reasons = { 'filters': test_info['map'], 'reas...

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27.857143

19.952381

def parse_location(loc, default_port): ''' loc can be of the format http://<ip/domain>[:<port>] eg: http://localhost:8888 http://localhost/ return ip (str), port (int) >>> parse_location('http://localhost/', 6379) ('localhost', 6379) >>> parse_location('http://localhost:8888'...

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24.681818

19.590909

def write_bed_with_trackline(bed, out, trackline, add_chr=False): """ Read a bed file and write a copy with a trackline. Here's a simple trackline example: 'track type=bed name="cool" description="A cool track."' Parameters ---------- bed : str Input bed file name. out : str ...

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33.36

19.84

def unread(thread, user): """ Check whether there are any unread messages for a particular thread for a user. """ return bool(thread.userthread_set.filter(user=user, unread=True))

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38.2

17.4

def get_message_definitions(self, msgid_or_symbol: str) -> list: """Returns the Message object for this message. :param str msgid_or_symbol: msgid_or_symbol may be either a numeric or symbolic id. :raises UnknownMessageError: if the message id is not defined. :rtype: List of MessageDefi...

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45.210526

19.315789

def get_or_none(cls, **filter_kwargs): """ Returns a video or None. """ try: video = cls.objects.get(**filter_kwargs) except cls.DoesNotExist: video = None return video

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23.2

13.4

def init_original_response(self): """Get the original response for comparing, confirm is_cookie_necessary""" no_cookie_resp = None self.is_cookie_necessary = True if 'json' in self.request: self.request['data'] = json.dumps(self.request.pop('json')).encode( se...

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47.259259

13.259259

def cli(ctx, feature_id, organism="", sequence=""): """Delete a feature Output: A standard apollo feature dictionary ({"features": [{...}]}) """ return ctx.gi.annotations.delete_feature(feature_id, organism=organism, sequence=sequence)

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30.75

25.25

def sample(self, nsims=1000): """ Samples from the posterior predictive distribution Parameters ---------- nsims : int (default : 1000) How many draws from the posterior predictive distribution Returns ---------- - np.ndarray of draws from the data ...

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43.894737

27.578947

def teetext(table, source=None, encoding=None, errors='strict', template=None, prologue=None, epilogue=None): """ Return a table that writes rows to a text file as they are iterated over. """ assert template is not None, 'template is required' return TeeTextView(table, source=source, e...

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42.3

24.9

def get_request(self, request): """Get a list of DownloadRequests for all data that are under the given field in the table of a Geopedia layer. :return: list of items which have to be downloaded :rtype: list(DownloadRequest) """ request.layer = self._parse_layer(request.layer, r...

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41.888889

16.777778

def match_lang(self, el, langs): """Match languages.""" match = False has_ns = self.supports_namespaces() root = self.root has_html_namespace = self.has_html_namespace # Walk parents looking for `lang` (HTML) or `xml:lang` XML property. parent = el found...

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39.694118

19.388235

def output_vm(gandi, vm, datacenters, output_keys, justify=10): """ Helper to output a vm information.""" output_generic(gandi, vm, output_keys, justify) if 'datacenter' in output_keys: for dc in datacenters: if dc['id'] == vm['datacenter_id']: dc_name = dc.get('dc_code'...

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34.47619

19.952381

def delete_item_list(self, item_list_url): """ Delete an Item List on the server :type item_list_url: String or ItemList :param item_list_url: the URL of the list to which to add the items, or an ItemList object :rtype: Boolean :returns: True if the item list was de...

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31.153846

19.692308

def visit_NameConstant(self, node: AST, dfltChaining: bool = True) -> str: """Return `node`s name as string.""" return str(node.value)

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49.333333

14.666667

def replace_seqres(self, pdb, update_atoms = True): """Replace SEQRES lines with a new sequence, optionally removing mutated sidechains""" newpdb = PDB() inserted_seqres = False entries_before_seqres = set(["HEADER", "OBSLTE", "TITLE", "CAVEAT", "COMPND", "SOURCE", ...

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33.391304

19.478261

def delete(self, template_name): """Delete a template""" template = db.Template.find_one(template_name=template_name) if not template: return self.make_response('No such template found', HTTP.NOT_FOUND) db.session.delete(template) db.session.commit() auditlog...

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38.928571

22

def send_invoice(self): """ Pay and send the customer's latest invoice. :returns: True if an invoice was able to be created and paid, False otherwise (typically if there was nothing to invoice). """ from .billing import Invoice try: invoice = Invoice._api_create(customer=self.id) invoice.pay() ...

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27.933333

21.4

def htmlListToTR(l,trClass=None,tdClass=None,td1Class=None): """ turns a list into a <tr><td>something</td></tr> call this when generating HTML tables dynamically. """ html="<tr>" for item in l: if 'array' in str(type(item)): item=item[0] #TODO: why is this needed htm...

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29.5

18.7

def parse_attr_signature(sig): """ Parse an attribute signature """ match = ATTR_SIG_RE.match(sig.strip()) if not match: raise RuntimeError('Attribute signature invalid, got ' + sig) name, _, params = match.groups() if params is not None and params.strip() != '': params = split_sig(p...

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35.916667

14.25

def get_current_thread_id(thread): ''' Note: the difference from get_current_thread_id to get_thread_id is that for the current thread we can get the thread id while the thread.ident is still not set in the Thread instance. ''' try: # Fast path without getting lock. tid = thread....

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41.277778

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def _execute_handler(self, p_command, p_todo_id=None, p_output=None): """ Executes a command, given as a string. """ p_output = p_output or self._output self._console_visible = False self._last_cmd = (p_command, p_output == self._output) try: p_comma...

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def mesh_to_BVH(mesh): """ Create a BVHModel object from a Trimesh object Parameters ----------- mesh : Trimesh Input geometry Returns ------------ bvh : fcl.BVHModel BVH of input geometry """ bvh = fcl.BVHModel() bvh.beginModel(num_tris_=len(mesh.faces), ...

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22.047619

17.47619

def forward_filter(self, x, mask=None): """Run a Kalman filter over a provided sequence of outputs. Note that the returned values `filtered_means`, `predicted_means`, and `observation_means` depend on the observed time series `x`, while the corresponding covariances are independent of the observed seri...

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50.009217

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def should_stale_item_be_fetched_synchronously(self, delta, *args, **kwargs): """ Return whether to refresh an item synchronously when it is found in the cache but stale """ if self.fetch_on_stale_threshold is None: return False return delta > (self.fetch_on_s...

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43

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def flags(self, value): """ Setter for **self.__flags** attribute. :param value: Attribute value. :type value: int """ if value is not None: assert type(value) is int, "'{0}' attribute: '{1}' type is not 'int'!".format("flags", value) self.__flags = ...

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19

def to_reminders(self, ical, label=None, priority=None, tags=None, tail=None, sep=" ", postdate=None, posttime=None): """Return Remind commands for all events of a iCalendar""" if not hasattr(ical, 'vevent_list'): return '' reminders = [self.to_remind(vevent, la...

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48.5

19.1

def beep(self): """Make dimmer beep. Not all devices support this""" self.logger.info("Dimmer %s beep", self.device_id) self.hub.direct_command(self.device_id, '30', '00') success = self.hub.check_success(self.device_id, '30', '00') return success

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31.333333

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def wrap_object(obj, decorator): """ Decorates the given object with the decorator function. If obj is a method, the method is decorated with the decorator function and returned. If obj is a class (i.e., a class based view), the methods in the class corresponding to HTTP methods will be decorated a...

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def fixpoint_runner(self): """Work list algorithm that runs the fixpoint algorithm.""" q = self.cfg.nodes while q != []: x_i = constraint_table[q[0]] # x_i = q[0].old_constraint self.analysis.fixpointmethod(q[0]) # y = F_i(x_1, ..., x_n); y = constraint_tab...

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43.928571

25

def add_tag(self, key, value=''): """ Add a tag to this object. Tag's are stored by AWS and can be used to organize and filter resources. Adding a tag involves a round-trip to the EC2 service. :type key: str :param key: The key or name of the tag being stored. ...

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38.666667

20

def search_gallery(self, q): """Search the gallery with the given query string.""" url = self._base_url + "/3/gallery/search?q={0}".format(q) resp = self._send_request(url) return [_get_album_or_image(thing, self) for thing in resp]

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52

13.4

def _set_tasks_state(self, value): """ Purpose: Set state of all tasks of the current stage. :arguments: String """ if value not in states.state_numbers.keys(): raise ValueError(obj=self._uid, attribute='set_tasks_state', ...

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34.071429

15.071429

def _merge_relative_path(dst_path, rel_path): """Merge a relative tar file to a destination (which can be "gs://...").""" # Convert rel_path to be relative and normalize it to remove ".", "..", "//", # which are valid directories in fileystems like "gs://". norm_rel_path = os.path.normpath(rel_path.lstrip("/"))...

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40.05

22.1

def length_from_nodelist(self, nodelist): """Returns the route length (cost) from the first to the last node in nodelist""" cost = 0 for n1, n2 in zip(nodelist[0:len(nodelist) - 1], nodelist[1:len(nodelist)]): cost += self._problem.distance(n1, n2) return cost

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37.375

22.5

def create(self, request, project): """ POST method implementation """ JobNote.objects.create( job=Job.objects.get(repository__name=project, id=int(request.data['job_id'])), failure_classification_id=int(request.data['failure_classi...

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34.125

15.875

def instruction_ROL_memory(self, opcode, ea, m): """ Rotate memory left """ r = self.ROL(m) # log.debug("$%x ROL memory value $%x << 1 | Carry = $%x and write it to $%x \t| %s" % ( # self.program_counter, # m, r, ea, # self.cfg.mem_info.get_shortest(ea) # )...

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37.888889

17

def get_protein_data(peptide, pdata, headerfields, accfield): """These fields are currently not pool dependent so headerfields is ignored""" report = get_proteins(peptide, pdata, headerfields) return get_cov_descriptions(peptide, pdata, report)

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51.2

10.2

def comment_count(object): """ Usage: {% comment_count obj %} or {% comment_count obj as var %} """ return Comment.objects.filter( object_id=object.pk, content_type=ContentType.objects.get_for_model(object) ).count()

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23.818182

14.181818

def tagrefs(self): """Get the tags and reference numbers of all the vgroup members. Args:: no argument Returns:: list of (tag,ref) tuples, one for each vgroup member C library equivalent : Vgettagrefs ...

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26.12

21.16

def use_plenary_gradebook_view(self): """Pass through to provider GradeSystemGradebookSession.use_plenary_gradebook_view""" self._gradebook_view = PLENARY # self._get_provider_session('grade_system_gradebook_session') # To make sure the session is tracked for session in self._get_provide...

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50.111111

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def get_resource(self, device_id, resource_path): """Get a resource. :param str device_id: ID of the device (Required) :param str path: Path of the resource to get (Required) :returns: Device resource :rtype Resource """ resources = self.list_resources(device_id...

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32.5

14.714286

def buckingham_potential(self, structure, val_dict=None): """ Generate species, buckingham, and spring options for an oxide structure using the parameters in default libraries. Ref: 1. G.V. Lewis and C.R.A. Catlow, J. Phys. C: Solid State Phys., 18, 1149-1161 ...

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39.471429

14.442857

def process_superclass(self, entity: List[dict]) -> List[dict]: """ Replaces ILX ID with superclass ID """ superclass = entity.pop('superclass') label = entity['label'] if not superclass.get('ilx_id'): raise self.SuperClassDoesNotExistError( f'Superclass not g...

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52.714286

16.428571

def setRandomParams(self): """ set random hyperparameters """ params = sp.randn(self.getNumberParams()) self.setParams(params)

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26.833333

6.5

def list_from_metadata(cls, url, metadata): '''return a list of DatalakeRecords for the url and metadata''' key = cls._get_key(url) metadata = Metadata(**metadata) ct = cls._get_create_time(key) time_buckets = cls.get_time_buckets_from_metadata(metadata) return [cls(url, ...

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51.857143

15.285714

def _get_enum(self, source, bitarray): ''' Get enum value, based on the data in XML ''' raw_value = self._get_raw(source, bitarray) # Find value description. value_desc = source.find('item', {'value': str(raw_value)}) or self._get_rangeitem(source, raw_value) return { ...

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38.4

22.266667

def get_object(self, queryset=None): """ Implement cache on ``get_object`` method to avoid repetitive calls, in POST. """ if self._cached_object is None: self._cached_object = super(EntryCacheMixin, self).get_object( queryset) return self._cach...

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35.666667

7.888889

def proxy_schema(self): """ Get the Proxy-Schema option of a request. :return: the Proxy-Schema values or None if not specified by the request :rtype : String """ for option in self.options: if option.number == defines.OptionRegistry.PROXY_SCHEME.number: ...

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32.818182

17.181818

def is_string(val): """Determines whether the passed value is a string, safe for 2/3.""" try: basestring except NameError: return isinstance(val, str) return isinstance(val, basestring)

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30.142857

14.428571

def build_signature(self, user_api_key, user_secret, request): """Return the signature for the request.""" path = request.get_full_path() sent_signature = request.META.get( self.header_canonical('Authorization')) signature_headers = self.get_headers_from_signature(sent_signat...

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48.5

16.285714

def lookup_key(self): """Build a key from the "important" parts of a selector: elements, classes, ids. """ parts = set() for node in self.simple_selectors: for token in node.tokens: if token[0] not in ':[': parts.add(token) ...

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34.647059

16.117647

def head_account(self, headers=None, query=None, cdn=False): """ HEADs the account and returns the results. Useful headers returned are: =========================== ================================= x-account-bytes-used Object storage used for the ...

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43.657143

22.228571

def multiloss(losses, logging_namespace="multiloss", exclude_from_weighting=[]): """ Create a loss from multiple losses my mixing them. This multi-loss implementation is inspired by the Paper "Multi-Task Learning Using Uncertainty to Weight Losses for Scene Geometry and Semantics" by Kendall, Gal and Ci...

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50.842105

22.842105

def list_users(self, instance, limit=None, marker=None): """Returns all users for the specified instance.""" return instance.list_users(limit=limit, marker=marker)

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59

12.666667

def infix(*kinds): """Decorate a method as handling infix tokens of the given kinds""" def wrap(fn): try: fn.infix_kinds.extend(kinds) except AttributeError: fn.infix_kinds = list(kinds) return fn return wrap

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28.888889

14.555556

def wif(self, is_compressed=None): """ Return the WIF representation of this key, if available. """ secret_exponent = self.secret_exponent() if secret_exponent is None: return None if is_compressed is None: is_compressed = self.is_compressed() ...

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34.461538

8.769231

def stop(self, timeout = 10.0): """ Send all pending messages, close connection. Returns True if no message left to sent. False if dirty. - timeout: seconds to wait for sending remaining messages. disconnect immedately if None. """ if (self._send_greenlet is not None) and \ (self._send_queue.qsiz...

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30.913043

11.26087

def get_data_view_service_status(self, data_view_id): """ Retrieves the status for all of the services associated with a data view: - predict - experimental_design - data_reports - model_reports :param data_view_id: The ID number of the data view ...

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37.923077

21.461538

def matrix_directed_unweighted(user): """ Returns a directed, unweighted matrix where an edge exists if there is at least one call or text. """ matrix = _interaction_matrix(user, interaction=None) for a in range(len(matrix)): for b in range(len(matrix)): if matrix[a][b] is no...

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32.416667

14.416667

def check_if_branch_exist(db, root_hash, key_prefix): """ Given a key prefix, return whether this prefix is the prefix of an existing key in the trie. """ validate_is_bytes(key_prefix) return _check_if_branch_exist(db, root_hash, encode_to_bin(key_prefix))

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34.25

14.25

def _on_changed(self): """ Update the tree items """ self._updating = True to_collapse = [] self.clear() if self._editor and self._outline_mode and self._folding_panel: items, to_collapse = self.to_tree_widget_items( self._outline_mode....

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33.962963

13.592593

async def request(self, method, url, query_params=None, headers=None, body=None, post_params=None, _preload_content=True, _request_timeout=None): """Execute request :param method: http request method :param url: http request url :param query_p...

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41.520408

18.591837

def to_text(self, tree, force_root=False): """ Extract text from tags. Skip any selectors specified and include attributes if specified. Ignored tags will not have their attributes scanned either. """ self.extract_tag_metadata(tree) text = [] attributes...

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40.666667

17.933333

def is_installable_file(path): # type: (PipfileType) -> bool """Determine if a path can potentially be installed""" from packaging import specifiers if isinstance(path, Mapping): path = convert_entry_to_path(path) # If the string starts with a valid specifier operator, test if it is a vali...

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33.880952

21.738095

def simple_write(self, s, frame, node=None): """Simple shortcut for start_write + write + end_write.""" self.start_write(frame, node) self.write(s) self.end_write(frame)

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39.4

7.4

def get_resource(self): """Return the associated resource.""" references = {"resource_id": None, "parent_id": None, "grandparent_id": None} for model_cls, regexp in self._regexp.iteritems(): match = regexp.search(self.resource_ref) if match is not No...

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46.5

16.75

def _fix_channels(self, op, attrs, inputs): """A workaround for getting 'channels' or 'units' since onnx don't provide these attributes. We check the shape of weights provided to get the number. """ if op not in [mx.sym.Convolution, mx.sym.Deconvolution, mx.sym.FullyConnected]: ...

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51.16

20.72

def __validation_property_range(self, p): """ if p.sub_property_of(q) then for every y in included_ranges(p) we have y is subclass of some r in included_ranges(q) -- for object properties """ for y in p.included_ranges(): superclasses = y.super_classes_closure...

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56.857143

22

def save(self, **kwargs): """Overrides models.Model.save. - Generates slug. - Saves image file. """ if not self.width or not self.height: self.width, self.height = self.image.width, self.image.height # prefill the slug with the ID, it requires double save ...

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36.418605

18.27907

def _link_to_img(self): """ Generates a link to the user's Gravatar. >>> Gravatar('gridaphobe@gmail.com')._link_to_img() 'http://www.gravatar.com/avatar/16b87da510d278999c892cdbdd55c1b6?s=80&r=g' """ # make sure options are valid if self.rating.lower() no...

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32.791667

15.208333

def to_json(self): ''' Returns the JSON representation of this graph. ''' roots = [] for r in self.roots: roots.append(r.to_json()) return {'roots': roots}

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32.333333

15

def block_resource_fitnesses(self, block: block.Block): """Returns a map of nodename to average fitness value for this block. Assumes that required resources have been checked on all nodes.""" # Short-circuit! My algorithm is terrible, so it doesn't work well for the edge case where # t...

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35.555556

21.240741

def get_groupnames(self, sgs): """Get servicegroups list :return: comma separated list of servicegroups :rtype: str """ return ','.join([sgs[sg].get_name() for sg in self.servicegroups])

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31.571429

17

def _check_and_change_state_before_execution( self, verbose=True, ignore_all_deps=False, ignore_depends_on_past=False, ignore_task_deps=False, ignore_ti_state=False, mark_success=False, test_mode=False, job_id=No...

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39.954887

18.195489

def dumpu(self, data, url, **kwargs): """ opens url and passes to load() kwargs are passed to both open and dump """ return self.dump(data, self.open(url, 'w', **kwargs), **kwargs)

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35.833333

7.166667

def child_done(self, task, result, count): """Acquire the condition variable for the compound task object. Decrement the thread count. If we are the last thread to finish, release compound task thread, which is blocked in execute(). """ with self.regcond: self.logger...

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45.785714

11.214286

def fit_results_to_dict(fit_results, min_bound=None, max_bound=None): '''Create a JSON-comparable dict from a FitResults object Parameters: fit_results (FitResults): object containing fit parameters,\ errors and type min_bound: optional min value to add to dictionary if min isn't\ ...

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35.59375

25.96875

def _itraj(self, value): """ Reader-internal property that tracks the upcoming trajectory index. Should not be used within iterator loop. Parameters ---------- value : int The upcoming trajectory index. """ if value != self._selected_itraj: ...

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34.583333

15.583333

def add_to_group(self, group, user): """ Add a user to a group :type user: str :param user: User's email :type group: str :param group: Group name :rtype: dict :return: an empty dictionary """ data = {'group': group, 'user': user} ...

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23.2

14.666667

def pickle_matpower_cases(case_paths, case_format=2): """ Parses the MATPOWER case files at the given paths and pickles the resulting Case objects to the same directory. """ import pylon.io if isinstance(case_paths, basestring): case_paths = [case_paths] for case_path in case_paths...

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38.571429

17.428571

def delete_item(self, item): """Delete an object in DynamoDB. :param item: Unpacked into kwargs for :func:`boto3.DynamoDB.Client.delete_item`. :raises bloop.exceptions.ConstraintViolation: if the condition (or atomic) is not met. """ try: self.dynamodb_client.delete_...

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42.7

21.6

def aggregation_result_extractor(impact_report, component_metadata): """Extracting aggregation result of breakdown from the impact layer. :param impact_report: the impact report that acts as a proxy to fetch all the data that extractor needed :type impact_report: safe.report.impact_report.ImpactRep...

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36.586777

17.520661

def residue_network(): """The network for the residue example. Current and previous state are all nodes OFF. Diagram:: +~~~~~~~+ +~~~~~~~+ | A | | B | +~~>| (AND) | | (AND) |<~~+ | +~~~~~~~+ +~~~~~~~+ | ...

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31.469388

16.489796

def grab_idx(x,i,batch_first:bool=True): "Grab the `i`-th batch in `x`, `batch_first` stating the batch dimension." if batch_first: return ([o[i].cpu() for o in x] if is_listy(x) else x[i].cpu()) else: return ([o[:,i].cpu() for o in x] if is_listy(x) else x[:,i].cpu())

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72.5

32.5

def getConParams(virtualhost): """ Connection object builder. Args: virtualhost (str): selected virtualhost in rabbitmq Returns: pika.ConnectionParameters: object filled by `constants` from :class:`edeposit.amqp.settings`. """ return pika.ConnectionParameters( h...

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27.4

14.6

def initialize_library(self, library, lib_type=VERSION_STORE, **kwargs): """ Create an Arctic Library or a particular type. Parameters ---------- library : `str` The name of the library. e.g. 'library' or 'user.library' lib_type : `str` The type ...

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45.580645

25

def execute(self, command, *args, **kw): """Executes redis command in a free connection and returns future waiting for result. Picks connection from free pool and send command through that connection. If no connection is found, returns coroutine waiting for free connecti...

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42.8125

15.625

def unregisterMachine(self, machineName): """ This operation unregisters a portal machine from a portal site. The operation can only performed when there are two machines participating in a portal site. """ url = self._url + "/machines/unregister" params = { ...

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37.6

11.6

def create(cls, collection): """ Creates document object without really creating it in the collection. :param collection Collection instance :returns Document """ api = Client.instance().api doc = Document( id='', key='', ...

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20.526316

21.684211