kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def search(self): """Returns the list of brains that match with the request criteria """ brains = [] # TODO Legacy for name, adapter in getAdapters((self.context, self.request), IReferenceWidgetVocabulary): brains.extend(adapte...	[ "def", "search", "(", "self", ")", ":", "brains", "=", "[", "]", "# TODO Legacy", "for", "name", ",", "adapter", "in", "getAdapters", "(", "(", "self", ".", "context", ",", "self", ".", "request", ")", ",", "IReferenceWidgetVocabulary", ")", ":", "brains...	37.555556	16.111111
def delete(self, comment_id, issue_id=None, repo_slug=None): """ Delete an issue from one of your repositories. """ issue_id = issue_id or self.issue_id repo_slug = repo_slug or self.bitbucket.repo_slug or '' url = self.bitbucket.url('DELETE_COMMENT', ...	[ "def", "delete", "(", "self", ",", "comment_id", ",", "issue_id", "=", "None", ",", "repo_slug", "=", "None", ")", ":", "issue_id", "=", "issue_id", "or", "self", ".", "issue_id", "repo_slug", "=", "repo_slug", "or", "self", ".", "bitbucket", ".", "repo_...	53.636364	14.636364
def missing_intervals(startdate, enddate, start, end, dateconverter=None, parseinterval=None, intervals=None): '''Given a ``startdate`` and an ``enddate`` dates, evaluate the date intervals from which data is not available. It return a list of ...	[ "def", "missing_intervals", "(", "startdate", ",", "enddate", ",", "start", ",", "end", ",", "dateconverter", "=", "None", ",", "parseinterval", "=", "None", ",", "intervals", "=", "None", ")", ":", "parseinterval", "=", "parseinterval", "or", "default_parse_i...	38.619048	16.428571
def split_trailing_whitespace(word): """ This function takes a word, such as 'test\n\n' and returns ('test','\n\n') """ stripped_length = len(word.rstrip()) return word[0:stripped_length], word[stripped_length:]	[ "def", "split_trailing_whitespace", "(", "word", ")", ":", "stripped_length", "=", "len", "(", "word", ".", "rstrip", "(", ")", ")", "return", "word", "[", "0", ":", "stripped_length", "]", ",", "word", "[", "stripped_length", ":", "]" ]	37.666667	10
def proximal_arg_scaling(prox_factory, scaling): r"""Calculate the proximal of function F(x * scaling). Parameters ---------- prox_factory : callable A factory function that, when called with a step size, returns the proximal operator of ``F`` scaling : float or sequence of floats o...	[ "def", "proximal_arg_scaling", "(", "prox_factory", ",", "scaling", ")", ":", "# To begin, we could check for two things:", "# * Currently, we do not support complex scaling. We could therefore catch", "# nonempty imaginary parts.", "# * If some components of scaling are zero, then the follo...	36.297619	22.630952
def rename(self): """ rename_expr ::= rename param_start rename_parameters param_stop expression rename_parameters ::= relation_name \| paren_left attribute_list paren_right \| relation_name paren_left attribute_list paren_right """ params = sel...	[ "def", "rename", "(", "self", ")", ":", "params", "=", "self", ".", "relation_name", "^", "(", "Optional", "(", "self", ".", "relation_name", ")", "+", "self", ".", "parenthesize", "(", "self", ".", "attribute_list", ")", ")", "return", "self", ".", "p...	41.666667	20
def spectra(self, alpha=None, nmax=None, convention='power', unit='per_l', base=10.): """ Return the spectra of one or more Slepian functions. Usage ----- spectra = x.spectra([alpha, nmax, convention, unit, base]) Returns ------- spectra ...	[ "def", "spectra", "(", "self", ",", "alpha", "=", "None", ",", "nmax", "=", "None", ",", "convention", "=", "'power'", ",", "unit", "=", "'per_l'", ",", "base", "=", "10.", ")", ":", "if", "alpha", "is", "None", ":", "if", "nmax", "is", "None", "...	47.192308	25.384615
def positions(self, reverse=False): """returns a generator that walks the positions of this tree in DFO""" def Posgen(reverse): if reverse: lastrootsib = self.last_sibling_position(self.root) current = self.last_decendant(lastrootsib) while cur...	[ "def", "positions", "(", "self", ",", "reverse", "=", "False", ")", ":", "def", "Posgen", "(", "reverse", ")", ":", "if", "reverse", ":", "lastrootsib", "=", "self", ".", "last_sibling_position", "(", "self", ".", "root", ")", "current", "=", "self", "...	42.333333	11.266667
def add_url_rule(self, rule, endpoint=None, view_func=None, provide_automatic_options=None, register_with_babel=False, **options): """ Like :meth:`~flask.Flask.add_url_rule`, but if ``register_with_babel`` is True, then we also allow the Babel Bundle an ...	[ "def", "add_url_rule", "(", "self", ",", "rule", ",", "endpoint", "=", "None", ",", "view_func", "=", "None", ",", "provide_automatic_options", "=", "None", ",", "register_with_babel", "=", "False", ",", "", "", "options", ")", ":", "if", "self", ".", ...	55.928571	23.928571
def activate(locale): """ Override django's utils.translation.activate(). Django forces files to be named django.mo (http://code.djangoproject.com/ticket/6376). Since that's dumb and we want to be able to load different files depending on what part of the site the user is in, we'll make our own fu...	[ "def", "activate", "(", "locale", ")", ":", "if", "INSTALL_JINJA_TRANSLATIONS", ":", "install_jinja_translations", "(", ")", "if", "django", ".", "VERSION", ">=", "(", "1", ",", "3", ")", ":", "django_trans", ".", "_active", ".", "value", "=", "_activate", ...	41.666667	20.466667
def set_key_color(self, color: Tuple[int, int, int]) -> None: """Set a color to be transparent during blitting functions. Args: color (Union[Tuple[int, int, int], Sequence[int]]): An (r, g, b) sequence or Color instance. """ lib.TCOD_image_set_key_color(self....	[ "def", "set_key_color", "(", "self", ",", "color", ":", "Tuple", "[", "int", ",", "int", ",", "int", "]", ")", "->", "None", ":", "lib", ".", "TCOD_image_set_key_color", "(", "self", ".", "image_c", ",", "color", ")" ]	41	18
def get_hypervisor(): ''' Returns the name of the hypervisor running on this node or ``None``. Detected hypervisors: - kvm - xen - bhyve CLI Example: .. code-block:: bash salt '*' virt.get_hypervisor .. versionadded:: 2019.2.0 the function and the ``kvm``, ``xen...	[ "def", "get_hypervisor", "(", ")", ":", "# To add a new 'foo' hypervisor, add the _is_foo_hyper function,", "# add 'foo' to the list below and add it to the docstring with a .. versionadded::", "hypervisors", "=", "[", "'kvm'", ",", "'xen'", ",", "'bhyve'", "]", "result", "=", "[...	28.833333	29.25
def requires_authentication(fn): """ Requires that the calling Subject be authenticated before allowing access. :raises UnauthenticatedException: indicating that the decorated method is not allowed to be executed because the ...	[ "def", "requires_authentication", "(", "fn", ")", ":", "@", "functools", ".", "wraps", "(", "fn", ")", "def", "wrap", "(", "", "args", ",", "", "*", "kwargs", ")", ":", "subject", "=", "Yosai", ".", "get_current_subject", "(", ")", "if", "not", "su...	37.368421	22.421053
def fetchEC2InstanceDict(regionNickname=None): """ Fetches EC2 instances types by region programmatically using the AWS pricing API. See: https://aws.amazon.com/blogs/aws/new-aws-price-list-api/ :return: A dict of InstanceType objects, where the key is the string: aws instance name (examp...	[ "def", "fetchEC2InstanceDict", "(", "regionNickname", "=", "None", ")", ":", "ec2Source", "=", "'https://pricing.us-east-1.amazonaws.com/offers/v1.0/aws/AmazonEC2/current/index.json'", "if", "regionNickname", "is", "None", ":", "regionNickname", "=", "'us-west-2'", "region", ...	42.296296	27.037037
def get_csv_from_metadata(dsn, d): """ Two goals. Get all csv from metadata, and return new metadata with generated filenames to match files. :param str dsn: Dataset name :param dict d: Metadata :return dict _csvs: Csv """ logger_csvs.info("enter get_csv_from_metadata") _csvs = OrderedD...	[ "def", "get_csv_from_metadata", "(", "dsn", ",", "d", ")", ":", "logger_csvs", ".", "info", "(", "\"enter get_csv_from_metadata\"", ")", "_csvs", "=", "OrderedDict", "(", ")", "_d", "=", "copy", ".", "deepcopy", "(", "d", ")", "try", ":", "if", "\"paleoDat...	34.423077	24.576923
def execute(self, arg_str='', **kwargs): """runs the passed in arguments and returns an iterator on the output of running command""" cmd = "{} {} {}".format(self.cmd_prefix, self.script, arg_str) expected_ret_code = kwargs.pop('code', 0) # any kwargs with all capital letters sho...	[ "def", "execute", "(", "self", ",", "arg_str", "=", "''", ",", "", "", "kwargs", ")", ":", "cmd", "=", "\"{} {} {}\"", ".", "format", "(", "self", ".", "cmd_prefix", ",", "self", ".", "script", ",", "arg_str", ")", "expected_ret_code", "=", "kwargs",...	33.915254	17.474576
def filter(self, source_file, encoding): # noqa A001 """Parse XML file.""" sources = [] for content, filename, enc in self.get_content(source_file): self.additional_context = self.get_context(filename) sources.extend(self._filter(content, source_file, enc)) retu...	[ "def", "filter", "(", "self", ",", "source_file", ",", "encoding", ")", ":", "# noqa A001", "sources", "=", "[", "]", "for", "content", ",", "filename", ",", "enc", "in", "self", ".", "get_content", "(", "source_file", ")", ":", "self", ".", "additional_...	40.375	21.25
def process_user_input(self): """ This overrides the method in ConsoleMenu to allow for comma-delimited and range inputs. Examples: All of the following inputs would have the same result: * 1,2,3,4 * 1-4 * 1-2,3-4 * 1 -...	[ "def", "process_user_input", "(", "self", ")", ":", "user_input", "=", "self", ".", "screen", ".", "input", "(", ")", "try", ":", "indexes", "=", "self", ".", "__parse_range_list", "(", "user_input", ")", "# Subtract 1 from each number for its actual index number", ...	33.68	19.6
def stop(state, host, ctid): ''' Stop OpenVZ containers. + ctid: CTID of the container to stop ''' args = ['{0}'.format(ctid)] yield 'vzctl stop {0}'.format(' '.join(args))	[ "def", "stop", "(", "state", ",", "host", ",", "ctid", ")", ":", "args", "=", "[", "'{0}'", ".", "format", "(", "ctid", ")", "]", "yield", "'vzctl stop {0}'", ".", "format", "(", "' '", ".", "join", "(", "args", ")", ")" ]	19	23
def parse_cfg(self): """ parses the given config file for experiments. """ self.cfgparser = ConfigParser() if not self.cfgparser.read(self.options.config): raise SystemExit('config file %s not found.'%self.options.config) # Change the current working directory to be relativ...	[ "def", "parse_cfg", "(", "self", ")", ":", "self", ".", "cfgparser", "=", "ConfigParser", "(", ")", "if", "not", "self", ".", "cfgparser", ".", "read", "(", "self", ".", "options", ".", "config", ")", ":", "raise", "SystemExit", "(", "'config file %s not...	46.9	19.4
def load_pickle(file_path): """ Unpickle some data from a given path. Input: - file_path: Target file path. Output: - data: The python object that was serialized and stored in disk. """ pkl_file = open(file_path, 'rb') data = pickle.load(pkl_file) pkl_file.close() return data	[ "def", "load_pickle", "(", "file_path", ")", ":", "pkl_file", "=", "open", "(", "file_path", ",", "'rb'", ")", "data", "=", "pickle", ".", "load", "(", "pkl_file", ")", "pkl_file", ".", "close", "(", ")", "return", "data" ]	25.333333	15.833333
def advance_to_checkpoint(self, checkpoint): """ Advance to the specified checkpoint, passing all preceding checkpoints including the specified checkpoint. """ if checkpoint in self._checkpoints: for cp in self._checkpoints: self.insert(cp) if ...	[ "def", "advance_to_checkpoint", "(", "self", ",", "checkpoint", ")", ":", "if", "checkpoint", "in", "self", ".", "_checkpoints", ":", "for", "cp", "in", "self", ".", "_checkpoints", ":", "self", ".", "insert", "(", "cp", ")", "if", "cp", "==", "checkpoin...	38.545455	13.090909
def want_release(self): """Does the user normally want to release this package. Some colleagues find it irritating to have to remember to answer the question "Check out the tag (for tweaks or pypi/distutils server upload)" with the non-default 'no' when in 99 percent of the case...	[ "def", "want_release", "(", "self", ")", ":", "default", "=", "True", "if", "self", ".", "config", "is", "None", ":", "return", "default", "try", ":", "result", "=", "self", ".", "config", ".", "getboolean", "(", "'zest.releaser'", ",", "'release'", ")",...	39.727273	22.818182
def gaussian1d_moments(data, mask=None): """ Estimate 1D Gaussian parameters from the moments of 1D data. This function can be useful for providing initial parameter values when fitting a 1D Gaussian to the ``data``. Parameters ---------- data : array_like (1D) The 1D array. m...	[ "def", "gaussian1d_moments", "(", "data", ",", "mask", "=", "None", ")", ":", "if", "np", ".", "any", "(", "~", "np", ".", "isfinite", "(", "data", ")", ")", ":", "data", "=", "np", ".", "ma", ".", "masked_invalid", "(", "data", ")", "warnings", ...	30.704545	21.113636
def find(self, s): """Locates the leader of the set to which the element ``s`` belongs. Parameters ---------- s : object An object that the ``UnionFind`` contains. Returns ------- object The leader of the set that contains ``s``. ...	[ "def", "find", "(", "self", ",", "s", ")", ":", "pSet", "=", "[", "s", "]", "parent", "=", "self", ".", "_leader", "[", "s", "]", "while", "parent", "!=", "self", ".", "_leader", "[", "parent", "]", ":", "pSet", ".", "append", "(", "parent", ")...	23.68	19.32
def instruction_to_svg_dict(self, instruction_or_id, copy_result=True): """Return the SVG dict for the SVGBuilder. :param instruction_or_id: the instruction or id, see :meth:`get_instruction_id` :param bool copy_result: whether to copy the result :rtype: dict The resu...	[ "def", "instruction_to_svg_dict", "(", "self", ",", "instruction_or_id", ",", "copy_result", "=", "True", ")", ":", "instruction_id", "=", "self", ".", "get_instruction_id", "(", "instruction_or_id", ")", "if", "instruction_id", "in", "self", ".", "_cache", ":", ...	36.842105	16.894737
def visit(cls, value, value_type=None, **kwargs): """A value visitor, which visits instances (typically), applies :py:meth:`normalize.visitor.VisitorPattern.apply` to every attribute slot, and returns the reduced result. Like :py:func:`normalize.diff.diff`, this function accepts a serie...	[ "def", "visit", "(", "cls", ",", "value", ",", "value_type", "=", "None", ",", "", "", "kwargs", ")", ":", "visitor", "=", "cls", ".", "Visitor", "(", "cls", ".", "unpack", ",", "cls", ".", "apply", ",", "cls", ".", "aggregate", ",", "cls", "."...	40.973684	21.026316
def _is_target_region(self, stat, game_region): """Returns if the stat matches target game region. :param stat: Json of gameplay stat. :type stat: dict :param game_region: Target game region. :type game_region: str :return: return does the stat...	[ "def", "_is_target_region", "(", "self", ",", "stat", ",", "game_region", ")", ":", "if", "game_region", "==", "constants", ".", "GAME_REGION_WILDCARD", ":", "return", "True", "return", "stat", "[", "'Region'", "]", "==", "game_region" ]	38.846154	12.769231
def string_to_34_array(sou=None, pin=None, man=None, honors=None): """ Method to convert one line string tiles format to the 34 array We need it to increase readability of our tests """ results = TilesConverter.string_to_136_array(sou, pin, man, honors) results = TilesCon...	[ "def", "string_to_34_array", "(", "sou", "=", "None", ",", "pin", "=", "None", ",", "man", "=", "None", ",", "honors", "=", "None", ")", ":", "results", "=", "TilesConverter", ".", "string_to_136_array", "(", "sou", ",", "pin", ",", "man", ",", "honors...	45.375	17.125
def getSamplingStrategy(self, serviceName): """ Parameters: - serviceName """ self._seqid += 1 future = self._reqs[self._seqid] = concurrent.Future() self.send_getSamplingStrategy(serviceName) return future	[ "def", "getSamplingStrategy", "(", "self", ",", "serviceName", ")", ":", "self", ".", "_seqid", "+=", "1", "future", "=", "self", ".", "_reqs", "[", "self", ".", "_seqid", "]", "=", "concurrent", ".", "Future", "(", ")", "self", ".", "send_getSamplingStr...	25.666667	13
def iterfiles(service, name=None, mimeType=SHEET, order=FILEORDER): """Fetch and yield ``(id, name)`` pairs for Google drive files.""" params = {'orderBy': order, 'pageToken': None} q = [] if name is not None: q.append("name='%s'" % name) if mimeType is not None: q.append("mimeType='...	[ "def", "iterfiles", "(", "service", ",", "name", "=", "None", ",", "mimeType", "=", "SHEET", ",", "order", "=", "FILEORDER", ")", ":", "params", "=", "{", "'orderBy'", ":", "order", ",", "'pageToken'", ":", "None", "}", "q", "=", "[", "]", "if", "n...	33.315789	16.578947
def format_ubuntu_dialog(df): """ Print statements paired with replies, formatted for easy review """ s = '' for i, record in df.iterrows(): statement = list(split_turns(record.Context))[-1] # <1> reply = list(split_turns(record.Utterance))[-1] # <2> s += 'Statement: {}\n'.format(s...	[ "def", "format_ubuntu_dialog", "(", "df", ")", ":", "s", "=", "''", "for", "i", ",", "record", "in", "df", ".", "iterrows", "(", ")", ":", "statement", "=", "list", "(", "split_turns", "(", "record", ".", "Context", ")", ")", "[", "-", "1", "]", ...	41.888889	14.444444
def is_time_valid(self, timestamp): """Check if time is valid for this Timerange If sec_from_morning is not provided, get the value. :param timestamp: time to check :type timestamp: int :return: True if time is valid (in interval), False otherwise :rtype: bool "...	[ "def", "is_time_valid", "(", "self", ",", "timestamp", ")", ":", "sec_from_morning", "=", "get_sec_from_morning", "(", "timestamp", ")", "return", "(", "self", ".", "is_valid", "and", "self", ".", "hstart", "", "3600", "+", "self", ".", "mstart", "", "60...	36.333333	14.8
def set_baseline(self, version): """Set the baseline into the creation information table version: str The version of the current database to set in the information table. The baseline must be in the format x.x.x where x are numbers. """ pattern = re.compile(r"^\d...	[ "def", "set_baseline", "(", "self", ",", "version", ")", ":", "pattern", "=", "re", ".", "compile", "(", "r\"^\\d+\\.\\d+\\.\\d+$\"", ")", "if", "not", "re", ".", "match", "(", "pattern", ",", "version", ")", ":", "raise", "ValueError", "(", "'Wrong versio...	33.029412	13.735294
def _synthesize(self): """ Assigns all placeholder labels to actual values and implicitly declares the ``ro`` register for backwards compatibility. Changed in 1.9: Either all qubits must be defined or all undefined. If qubits are undefined, this method will not help you. You mus...	[ "def", "_synthesize", "(", "self", ")", ":", "self", ".", "_synthesized_instructions", "=", "instantiate_labels", "(", "self", ".", "_instructions", ")", "self", ".", "_synthesized_instructions", "=", "implicitly_declare_ro", "(", "self", ".", "_synthesized_instructio...	47.190476	29.285714
def bootstrap_isc(iscs, pairwise=False, summary_statistic='median', n_bootstraps=1000, ci_percentile=95, random_state=None): """One-sample group-level bootstrap hypothesis test for ISCs For ISCs from one more voxels or ROIs, resample subjects with replacement to construct a bootstrap dis...	[ "def", "bootstrap_isc", "(", "iscs", ",", "pairwise", "=", "False", ",", "summary_statistic", "=", "'median'", ",", "n_bootstraps", "=", "1000", ",", "ci_percentile", "=", "95", ",", "random_state", "=", "None", ")", ":", "# Standardize structure of input data", ...	39.763158	24.322368
def parse_yes_no_str(bool_str): """Parse a string serialization of boolean data as yes (Y) or no (N). Prase a string serialization of boolean data where True is "Y" and False is "N" case-insensitive. @param bool_str: The string to parse. @type bool_str: str @return: The interpreted string. ...	[ "def", "parse_yes_no_str", "(", "bool_str", ")", ":", "lower_bool_str", "=", "bool_str", ".", "lower", "(", ")", "if", "lower_bool_str", "==", "'n'", ":", "return", "False", "elif", "lower_bool_str", "==", "'y'", ":", "return", "True", "else", ":", "raise", ...	32.35	18.25
def write_groovy_script_and_configs( filename, content, job_configs, view_configs=None): """Write out the groovy script and configs to file. This writes the reconfigure script to the file location and places the expanded configs in subdirectories 'view_configs' / 'job_configs' that the script c...	[ "def", "write_groovy_script_and_configs", "(", "filename", ",", "content", ",", "job_configs", ",", "view_configs", "=", "None", ")", ":", "with", "open", "(", "filename", ",", "'w'", ")", "as", "h", ":", "h", ".", "write", "(", "content", ")", "if", "vi...	42.090909	17.30303
def graph( model, format='raw', prog='dot', path=None, name=None, consts=False, legend=False, collapse_deterministics=False, collapse_potentials=False, label_edges=True): """ graph( model, format='raw', prog='dot', path=None, name=None, co...	[ "def", "graph", "(", "model", ",", "format", "=", "'raw'", ",", "prog", "=", "'dot'", ",", "path", "=", "None", ",", "name", "=", "None", ",", "consts", "=", "False", ",", "legend", "=", "False", ",", "collapse_deterministics", "=", "False", ",", "co...	36.229787	17.293617
def iteritems(self, multi=False): """Like :meth:`items` but returns an iterator.""" for key, values in dict.iteritems(self): if multi: for value in values: yield key, value else: yield key, values[0]	[ "def", "iteritems", "(", "self", ",", "multi", "=", "False", ")", ":", "for", "key", ",", "values", "in", "dict", ".", "iteritems", "(", "self", ")", ":", "if", "multi", ":", "for", "value", "in", "values", ":", "yield", "key", ",", "value", "else"...	35.5	8.625
def _post_connect(self): """Initialize authentication when the connection is established and we are the initiator.""" if not self.initiator: if "plain" in self.auth_methods or "digest" in self.auth_methods: self.set_iq_get_handler("query","jabber:iq:auth", ...	[ "def", "_post_connect", "(", "self", ")", ":", "if", "not", "self", ".", "initiator", ":", "if", "\"plain\"", "in", "self", ".", "auth_methods", "or", "\"digest\"", "in", "self", ".", "auth_methods", ":", "self", ".", "set_iq_get_handler", "(", "\"query\"", ...	47.8125	14.25
def init_logs(): """Initiate log file.""" start_time = dt.fromtimestamp(time.time()).strftime('%Y%m%d_%H%M') logname = os.path.join(os.path.expanduser("~") + "/nanoGUI_" + start_time + ".log") handlers = [logging.FileHandler(logname)] logging.basicConfig( format='%(asctime)s %(message)s', ...	[ "def", "init_logs", "(", ")", ":", "start_time", "=", "dt", ".", "fromtimestamp", "(", "time", ".", "time", "(", ")", ")", ".", "strftime", "(", "'%Y%m%d_%H%M'", ")", "logname", "=", "os", ".", "path", ".", "join", "(", "os", ".", "path", ".", "exp...	46.583333	22.416667
def session(self): """ Creates a context with an open SQLAlchemy session. """ engine = self.engine connection = engine.connect() db_session = scoped_session( sessionmaker(autocommit=False, autoflush=True, bind=engine)) yield db_session db_session.close...	[ "def", "session", "(", "self", ")", ":", "engine", "=", "self", ".", "engine", "connection", "=", "engine", ".", "connect", "(", ")", "db_session", "=", "scoped_session", "(", "sessionmaker", "(", "autocommit", "=", "False", ",", "autoflush", "=", "True", ...	34	11.7
def domain_create(self, domain, master=True, **kwargs): """ Registers a new Domain on the acting user's account. Make sure to point your registrar to Linode's nameservers so that Linode's DNS manager will correctly serve your domain. :param domain: The domain to register to Lin...	[ "def", "domain_create", "(", "self", ",", "domain", ",", "master", "=", "True", ",", "", "", "kwargs", ")", ":", "params", "=", "{", "'domain'", ":", "domain", ",", "'type'", ":", "'master'", "if", "master", "else", "'slave'", ",", "}", "params", "...	33.37037	22.185185
def GetParent(self): """Constructs a path info corresponding to the parent of current path. The root path (represented by an empty list of components, corresponds to `/` on Unix-like systems) does not have a parent. Returns: Instance of `rdf_objects.PathInfo` or `None` if parent does not exist. ...	[ "def", "GetParent", "(", "self", ")", ":", "if", "self", ".", "root", ":", "return", "None", "return", "PathInfo", "(", "components", "=", "self", ".", "components", "[", ":", "-", "1", "]", ",", "path_type", "=", "self", ".", "path_type", ",", "dire...	29.3125	21.5
def create(dataset, target, features=None, max_iterations=10, validation_set='auto', class_weights = None, max_depth=6, step_size=0.3, min_loss_reduction=0.0, min_child_weight=0.1, row_subsample=1.0, column_subsample=1.0, verbose=True, ...	[ "def", "create", "(", "dataset", ",", "target", ",", "features", "=", "None", ",", "max_iterations", "=", "10", ",", "validation_set", "=", "'auto'", ",", "class_weights", "=", "None", ",", "max_depth", "=", "6", ",", "step_size", "=", "0.3", ",", "min_l...	46.322751	25.634921
def to_json(content, indent=None): """ Serializes a python object as JSON This method uses the DJangoJSONEncoder to to ensure that python objects such as Decimal objects are properly serialized. It can also serialize Django QuerySet objects. """ if isinstance(content, QuerySet): jso...	[ "def", "to_json", "(", "content", ",", "indent", "=", "None", ")", ":", "if", "isinstance", "(", "content", ",", "QuerySet", ")", ":", "json_serializer", "=", "serializers", ".", "get_serializer", "(", "'json'", ")", "(", ")", "serialized_content", "=", "j...	42.277778	23.277778
def health_check(self): """ Pull health and alarm information from the device. Purpose: Grab the cpu/mem usage, system/chassis alarms, top 5 \| processes, and states if the primary/backup partitions are on \| different versions. @returns: The output that should be s...	[ "def", "health_check", "(", "self", ")", ":", "output", "=", "'Chassis Alarms:\\n\\t'", "# Grab chassis alarms, system alarms, show chassis routing-engine,", "# 'show system processes extensive', and also xpath to the", "# relevant nodes on each.", "chassis_alarms", "=", "self", ".", ...	50.382979	20.446809
def fun_as_arg(self, x, args): """``fun_as_arg(x, fun, more_args)`` calls ``fun(x, *more_args)``. Use case:: fmin(cma.fun_as_arg, args=(fun,), gradf=grad_numerical) calls fun_as_args(x, args) and grad_numerical(x, fun, args=args) """ fun = args[0] more_a...	[ "def", "fun_as_arg", "(", "self", ",", "x", ",", "*", "args", ")", ":", "fun", "=", "args", "[", "0", "]", "more_args", "=", "args", "[", "1", ":", "]", "if", "len", "(", "args", ")", ">", "1", "else", "(", ")", "return", "fun", "(", "x", "...	29.307692	22.230769
def run_process(cwd, args): """Executes an external process via subprocess.Popen""" try: process = check_output(args, cwd=cwd, stderr=STDOUT) return process except CalledProcessError as e: log('Uh oh, the teapot broke again! Error:', e, type(e), lvl=verbose, pretty=True) log...	[ "def", "run_process", "(", "cwd", ",", "args", ")", ":", "try", ":", "process", "=", "check_output", "(", "args", ",", "cwd", "=", "cwd", ",", "stderr", "=", "STDOUT", ")", "return", "process", "except", "CalledProcessError", "as", "e", ":", "log", "("...	37.9	21
def new_kitchen(): """Create LittleChef directory structure (Kitchen)""" def _mkdir(d, content=""): if not os.path.exists(d): os.mkdir(d) # Add a README so that it can be added to version control readme_path = os.path.join(d, 'README') if not os.path.exist...	[ "def", "new_kitchen", "(", ")", ":", "def", "_mkdir", "(", "d", ",", "content", "=", "\"\"", ")", ":", "if", "not", "os", ".", "path", ".", "exists", "(", "d", ")", ":", "os", ".", "mkdir", "(", "d", ")", "# Add a README so that it can be added to vers...	41.230769	13.769231
def bear(a1, b1, a2, b2): """Find bearing/position angle between two points on a unit sphere. Parameters ---------- a1, b1 : float Longitude-like and latitude-like angles defining the first point. Both are in radians. a2, b2 : float Longitude-like and latitude-like angles d...	[ "def", "bear", "(", "a1", ",", "b1", ",", "a2", ",", "b2", ")", ":", "# Find perpendicular to the plane containing the base and", "# z-axis. Then find the perpendicular to the plane containing", "# the base and the target. The angle between these two is the", "# position angle or beari...	30	24.215054
def _create_auth(team, timeout=None): """ Reads the credentials, updates the access token if necessary, and returns it. """ url = get_registry_url(team) contents = _load_auth() auth = contents.get(url) if auth is not None: # If the access token expires within a minute, update it. ...	[ "def", "_create_auth", "(", "team", ",", "timeout", "=", "None", ")", ":", "url", "=", "get_registry_url", "(", "team", ")", "contents", "=", "_load_auth", "(", ")", "auth", "=", "contents", ".", "get", "(", "url", ")", "if", "auth", "is", "not", "No...	34.772727	17.863636
def get_base_info(self, obj): """Returns the base info of an object """ if obj is None: return {} info = { "id": obj.getId(), "uid": obj.UID(), "title": obj.Title(), "description": obj.Description(), "url": obj.abso...	[ "def", "get_base_info", "(", "self", ",", "obj", ")", ":", "if", "obj", "is", "None", ":", "return", "{", "}", "info", "=", "{", "\"id\"", ":", "obj", ".", "getId", "(", ")", ",", "\"uid\"", ":", "obj", ".", "UID", "(", ")", ",", "\"title\"", "...	23.2	15.866667
def _process_neg_flux(self, x, y): """Remove negative flux.""" if self._keep_neg: # Nothing to do return y old_y = None if np.isscalar(y): # pragma: no cover if y < 0: n_neg = 1 old_x = x old_y = y ...	[ "def", "_process_neg_flux", "(", "self", ",", "x", ",", "y", ")", ":", "if", "self", ".", "_keep_neg", ":", "# Nothing to do", "return", "y", "old_y", "=", "None", "if", "np", ".", "isscalar", "(", "y", ")", ":", "# pragma: no cover", "if", "y", "<", ...	30.666667	19.727273
def scoped_format(txt, **objects): """Format a string with respect to a set of objects' attributes. Example: >>> Class Foo(object): >>> def __init__(self): >>> self.name = "Dave" >>> print scoped_format("hello {foo.name}", foo=Foo()) hello Dave Args: ...	[ "def", "scoped_format", "(", "txt", ",", "", "", "objects", ")", ":", "pretty", "=", "objects", ".", "pop", "(", "\"pretty\"", ",", "RecursiveAttribute", ".", "format_pretty", ")", "expand", "=", "objects", ".", "pop", "(", "\"expand\"", ",", "RecursiveA...	38.521739	19.869565
def reconnect(self, conn_retries=None): ''' Connects to Redis with a exponential waiting (3**n) ''' if conn_retries is None: conn_retries = self.conn_retries count = 0 if self.logger: self.logger.info('Connecting to Redis..') while count < conn_re...	[ "def", "reconnect", "(", "self", ",", "conn_retries", "=", "None", ")", ":", "if", "conn_retries", "is", "None", ":", "conn_retries", "=", "self", ".", "conn_retries", "count", "=", "0", "if", "self", ".", "logger", ":", "self", ".", "logger", ".", "in...	37.818182	18
def all(self, query=None, **kwargs): """ Gets all organizations. """ return super(OrganizationsProxy, self).all(query=query)	[ "def", "all", "(", "self", ",", "query", "=", "None", ",", "", "", "kwargs", ")", ":", "return", "super", "(", "OrganizationsProxy", ",", "self", ")", ".", "all", "(", "query", "=", "query", ")" ]	25.333333	12.666667
def user(self): """ Return a (deferred) cached Koji user name for this change. """ # Note, do any tasks really have an "owner_id", or are they all # "owner"? owner_id = getattr(self.task, 'owner_id', self.task.owner) return self.task.connection.cache.user_name(owner_id)	[ "def", "user", "(", "self", ")", ":", "# Note, do any tasks really have an \"owner_id\", or are they all", "# \"owner\"?", "owner_id", "=", "getattr", "(", "self", ".", "task", ",", "'owner_id'", ",", "self", ".", "task", ".", "owner", ")", "return", "self", ".", ...	50.833333	20.833333
def split_path_and_file(s): """ Given a full path to a file, split and return a path and filename :param str s: Path :return str _path: Directory Path :return str _filename: Filename """ _path = s _filename = "" try: x = os.path.split(s) _path = x[0] _filenam...	[ "def", "split_path_and_file", "(", "s", ")", ":", "_path", "=", "s", "_filename", "=", "\"\"", "try", ":", "x", "=", "os", ".", "path", ".", "split", "(", "s", ")", "_path", "=", "x", "[", "0", "]", "_filename", "=", "x", "[", "1", "]", "except...	22.611111	17.388889
def arrow_head(document, x0, y0, x1, y1, arrowshape): "make arrow head at (x1,y1), arrowshape is tuple (d1, d2, d3)" import math dx = x1 - x0 dy = y1 - y0 poly = document.createElement('polygon') d = math.sqrt(dxdx + dydy) if d == 0.0: # XXX: equal, no "close enough" return poly try: d1, d2, d3 = l...	[ "def", "arrow_head", "(", "document", ",", "x0", ",", "y0", ",", "x1", ",", "y1", ",", "arrowshape", ")", ":", "import", "math", "dx", "=", "x1", "-", "x0", "dy", "=", "y1", "-", "y0", "poly", "=", "document", ".", "createElement", "(", "'polygon'"...	19.058824	24.823529
def handleEvent(self, event): """This method should be called every time through the main loop. It handles all of the keyboard key actions Parameters: \| eventObj - the event object obtained by calling pygame.event.get() Returns: \| False most of the tim...	[ "def", "handleEvent", "(", "self", ",", "event", ")", ":", "if", "not", "self", ".", "isEnabled", ":", "return", "False", "if", "(", "event", ".", "type", "==", "pygame", ".", "MOUSEBUTTONDOWN", ")", "and", "(", "event", ".", "button", "==", "1", ")"...	41.666667	25
def _construct_end_index( spansStartingFrom ): ''' Creates an index which stores all annotations (from spansStartingFrom) by their end position in text (annotation[END]). Each start position (in the index) is associated with a list of annotation objects (annotations ending at that...	[ "def", "_construct_end_index", "(", "spansStartingFrom", ")", ":", "endIndex", "=", "{", "}", "for", "i", "in", "spansStartingFrom", ":", "for", "span1", "in", "spansStartingFrom", "[", "i", "]", ":", "# keep the record of endTags, start positions (for determining the l...	48.711111	20.444444
def CopyToPath(self): """Copies the shell items to a path. Returns: str: converted shell item list path or None. """ number_of_path_segments = len(self._path_segments) if number_of_path_segments == 0: return None strings = [self._path_segments[0]] number_of_path_segments -= 1 ...	[ "def", "CopyToPath", "(", "self", ")", ":", "number_of_path_segments", "=", "len", "(", "self", ".", "_path_segments", ")", "if", "number_of_path_segments", "==", "0", ":", "return", "None", "strings", "=", "[", "self", ".", "_path_segments", "[", "0", "]", ...	33.333333	17
def analyze_modules(project, task_handle=taskhandle.NullTaskHandle()): """Perform static object analysis on all python files in the project Note that this might be really time consuming. """ resources = project.get_python_files() job_set = task_handle.create_jobset('Analyzing Modules', len(resource...	[ "def", "analyze_modules", "(", "project", ",", "task_handle", "=", "taskhandle", ".", "NullTaskHandle", "(", ")", ")", ":", "resources", "=", "project", ".", "get_python_files", "(", ")", "job_set", "=", "task_handle", ".", "create_jobset", "(", "'Analyzing Modu...	41.818182	12.818182
def cli(env): """Print environment variables.""" filtered_vars = dict([(k, v) for k, v in env.vars.items() if not k.startswith('_')]) env.fout(formatting.iter_to_table(filtered_vars))	[ "def", "cli", "(", "env", ")", ":", "filtered_vars", "=", "dict", "(", "[", "(", "k", ",", "v", ")", "for", "k", ",", "v", "in", "env", ".", "vars", ".", "items", "(", ")", "if", "not", "k", ".", "startswith", "(", "'_'", ")", "]", ")", "en...	40.333333	12.333333
def metal_complexation(metals, metal_binding_lig, metal_binding_bs): """Find all metal complexes between metals and appropriate groups in both protein and ligand, as well as water""" data = namedtuple('metal_complex', 'metal metal_orig_idx metal_type target target_orig_idx target_type ' ...	[ "def", "metal_complexation", "(", "metals", ",", "metal_binding_lig", ",", "metal_binding_bs", ")", ":", "data", "=", "namedtuple", "(", "'metal_complex'", ",", "'metal metal_orig_idx metal_type target target_orig_idx target_type '", "'coordination_num distance resnr restype '", ...	60.738562	30.026144
def do_workers(self, args): '''list all known workers''' workers = self.task_master.workers(alive=not args.all) for k in sorted(workers.iterkeys()): self.stdout.write('{0} ({1})\n'.format(k, workers[k])) if args.details: heartbeat = self.task_master.get_he...	[ "def", "do_workers", "(", "self", ",", "args", ")", ":", "workers", "=", "self", ".", "task_master", ".", "workers", "(", "alive", "=", "not", "args", ".", "all", ")", "for", "k", "in", "sorted", "(", "workers", ".", "iterkeys", "(", ")", ")", ":",...	49.333333	15.777778
def add_lb_secgroup(self, lb_name, hosts, port): """ Used by the load balancer deployer to register a hostname for a load balancer, in order that security group rules can be applied later. This is multiprocess-safe, but since keys are accessed only be a single load balancer deplo...	[ "def", "add_lb_secgroup", "(", "self", ",", "lb_name", ",", "hosts", ",", "port", ")", ":", "self", ".", "lb_sec_groups", ".", "merge", "(", "lb_name", ",", "{", "'hosts'", ":", "hosts", ",", "'port'", ":", "port", "}", ")" ]	43.6	26
def get_commit(self, sha): """ :calls: `GET /repos/:owner/:repo/commits/:sha <http://developer.github.com/v3/repos/commits>`_ :param sha: string :rtype: :class:`github.Commit.Commit` """ assert isinstance(sha, (str, unicode)), sha headers, data = self._requester.r...	[ "def", "get_commit", "(", "self", ",", "sha", ")", ":", "assert", "isinstance", "(", "sha", ",", "(", "str", ",", "unicode", ")", ")", ",", "sha", "headers", ",", "data", "=", "self", ".", "_requester", ".", "requestJsonAndCheck", "(", "\"GET\"", ",", ...	40.166667	18.5
def length(self): """Gets length :return: How many items in linked list of linked list """ item = self.head counter = 0 while item is not None: counter += 1 item = item.next_node return counter	[ "def", "length", "(", "self", ")", ":", "item", "=", "self", ".", "head", "counter", "=", "0", "while", "item", "is", "not", "None", ":", "counter", "+=", "1", "item", "=", "item", ".", "next_node", "return", "counter" ]	20.307692	19.307692
def get_current_roles(): """ Determines the list of roles, that the current host is assigned to. If ``env.roledefs`` is not set, an empty list is returned. :return: List of roles of the current host. :rtype: list """ current_host = env.host_string roledefs = env.get('roledefs') if r...	[ "def", "get_current_roles", "(", ")", ":", "current_host", "=", "env", ".", "host_string", "roledefs", "=", "env", ".", "get", "(", "'roledefs'", ")", "if", "roledefs", ":", "return", "[", "role", "for", "role", ",", "hosts", "in", "six", ".", "iteritems...	32.307692	23.076923
def write_zip( src_fs, # type: FS file, # type: Union[Text, BinaryIO] compression=zipfile.ZIP_DEFLATED, # type: int encoding="utf-8", # type: Text walker=None, # type: Optional[Walker] ): # type: (...) -> None """Write the contents of a filesystem to a zip file. Arguments: ...	[ "def", "write_zip", "(", "src_fs", ",", "# type: FS", "file", ",", "# type: Union[Text, BinaryIO]", "compression", "=", "zipfile", ".", "ZIP_DEFLATED", ",", "# type: int", "encoding", "=", "\"utf-8\"", ",", "# type: Text", "walker", "=", "None", ",", "# type: Option...	42.297297	19.472973
def schema(self, schema): """Specifies the input schema. Some data sources (e.g. JSON) can infer the input schema automatically from data. By specifying the schema here, the underlying data source can skip the schema inference step, and thus speed up data loading. :param schema...	[ "def", "schema", "(", "self", ",", "schema", ")", ":", "from", "pyspark", ".", "sql", "import", "SparkSession", "spark", "=", "SparkSession", ".", "builder", ".", "getOrCreate", "(", ")", "if", "isinstance", "(", "schema", ",", "StructType", ")", ":", "j...	44.681818	22.727273
def from_file(cls, fmt, filename=None, structure_file=None, are_coops=False): """ Creates a CompleteCohp object from an output file of a COHP calculation. Valid formats are either LMTO (for the Stuttgart LMTO-ASA code) or LOBSTER (for the LOBSTER code). Args: ...	[ "def", "from_file", "(", "cls", ",", "fmt", ",", "filename", "=", "None", ",", "structure_file", "=", "None", ",", "are_coops", "=", "False", ")", ":", "fmt", "=", "fmt", ".", "upper", "(", ")", "if", "fmt", "==", "\"LMTO\"", ":", "# LMTO COOPs and orb...	45.29661	20.398305
def _init_valid_functions(action_dimensions): """Initialize ValidFunctions and set up the callbacks.""" sizes = { "screen": tuple(int(i) for i in action_dimensions.screen), "screen2": tuple(int(i) for i in action_dimensions.screen), "minimap": tuple(int(i) for i in action_dimensions.minimap), } ...	[ "def", "_init_valid_functions", "(", "action_dimensions", ")", ":", "sizes", "=", "{", "\"screen\"", ":", "tuple", "(", "int", "(", "i", ")", "for", "i", "in", "action_dimensions", ".", "screen", ")", ",", "\"screen2\"", ":", "tuple", "(", "int", "(", "i...	37.470588	22.117647
def process_response(self, req, resp, resource): """ Serializes ``req.context['result']`` to resp.body as JSON. If :attr:`~zengine.settings.DEBUG` is True, ``sys._debug_db_queries`` (set by pyoko) added to response. """ if 'result' not in req.context: return...	[ "def", "process_response", "(", "self", ",", "req", ",", "resp", ",", "resource", ")", ":", "if", "'result'", "not", "in", "req", ".", "context", ":", "return", "req", ".", "context", "[", "'result'", "]", "[", "'is_login'", "]", "=", "'user_id'", "in"...	36.714286	19.666667
def get_by_name(self, name): """ Gets a SAN Manager by name. Args: name: Name of the SAN Manager Returns: dict: SAN Manager. """ san_managers = self._client.get_all() result = [x for x in san_managers if x['name'] == name] return ...	[ "def", "get_by_name", "(", "self", ",", "name", ")", ":", "san_managers", "=", "self", ".", "_client", ".", "get_all", "(", ")", "result", "=", "[", "x", "for", "x", "in", "san_managers", "if", "x", "[", "'name'", "]", "==", "name", "]", "return", ...	25.923077	14.692308
def metadata(func): """Add metadata to an item. Decorator that adds metadata to a given item such as the gelk revision used. """ @functools.wraps(func) def decorator(self, args, kwargs): eitem = func(self, args, **kwargs) metadata = { 'metadata__gelk_version': s...	[ "def", "metadata", "(", "func", ")", ":", "@", "functools", ".", "wraps", "(", "func", ")", "def", "decorator", "(", "self", ",", "", "args", ",", "", "", "kwargs", ")", ":", "eitem", "=", "func", "(", "self", ",", "", "args", ",", "", ""...	29.888889	17.666667
def wrapper__ignore(self, type_): """ Selectively ignore certain types when wrapping attributes. :param class type: The class/type definition to ignore. :rtype list(type): The current list of ignored types """ if type_ not in self.__exclusion_list: self.__ex...	[ "def", "wrapper__ignore", "(", "self", ",", "type_", ")", ":", "if", "type_", "not", "in", "self", ".", "__exclusion_list", ":", "self", ".", "__exclusion_list", ".", "append", "(", "type_", ")", "return", "self", ".", "__exclusion_list" ]	33.909091	15.727273
def is_data_value(searchpath, searchtree, dtype = None, empty_is_false = False): """ Follow searchpath through the datatree in searchtree and report if there exists a value of type dtype searchpath is a list of keys/indices If dtype is None check for any value you can also supply a tuple to dty...	[ "def", "is_data_value", "(", "searchpath", ",", "searchtree", ",", "dtype", "=", "None", ",", "empty_is_false", "=", "False", ")", ":", "if", "isinstance", "(", "searchpath", ",", "(", "str", ",", "unicode", ",", "int", ")", ")", ":", "searchpath", "=", ...	29.310345	19.068966
def save_institute(self, institute): """ Called when institute is created/updated. """ name = institute.name logger.debug("save_institute '%s'" % name) # institute created # institute updated if institute.is_active: # date_deleted is not set, user should exi...	[ "def", "save_institute", "(", "self", ",", "institute", ")", ":", "name", "=", "institute", ".", "name", "logger", ".", "debug", "(", "\"save_institute '%s'\"", "%", "name", ")", "# institute created", "# institute updated", "if", "institute", ".", "is_active", ...	35.130435	19.695652
def obj2bunch(data, commdct, obj): """make a new bunch object using the data object""" dtls = data.dtls key = obj[0].upper() key_i = dtls.index(key) abunch = makeabunch(commdct, obj, key_i) return abunch	[ "def", "obj2bunch", "(", "data", ",", "commdct", ",", "obj", ")", ":", "dtls", "=", "data", ".", "dtls", "key", "=", "obj", "[", "0", "]", ".", "upper", "(", ")", "key_i", "=", "dtls", ".", "index", "(", "key", ")", "abunch", "=", "makeabunch", ...	31.571429	11.714286
def is_bad_chunk(self, chunk_meta, grp, pug, chk): """Check the chunk is offline or not""" meta = self.get_chunk_meta_item(chunk_meta, grp, pug, chk) if meta.CS & 0x8 != 0: return True return False	[ "def", "is_bad_chunk", "(", "self", ",", "chunk_meta", ",", "grp", ",", "pug", ",", "chk", ")", ":", "meta", "=", "self", ".", "get_chunk_meta_item", "(", "chunk_meta", ",", "grp", ",", "pug", ",", "chk", ")", "if", "meta", ".", "CS", "&", "0x8", "...	39.333333	13.833333
def send_request(self, message): """Send message request to HANA db and return reply message :param message: Instance of Message object containing segments and parts of a HANA db request :returns: Instance of reply Message object """ payload = message.pack() # obtain BytesIO ins...	[ "def", "send_request", "(", "self", ",", "message", ")", ":", "payload", "=", "message", ".", "pack", "(", ")", "# obtain BytesIO instance", "return", "self", ".", "__send_message_recv_reply", "(", "payload", ".", "getvalue", "(", ")", ")" ]	55	17.571429
def arrange_plots_on_one_canvas(FigureAxTupleArray, title='', SubtitleArray = [], show_fig=True): """ Arranges plots, given in an array of tuples consisting of fig and axs, onto a subplot-figure consisting of 2 horizontal times the lenght of the passed (fig,axs)-array divided by 2 vertical subplots ...	[ "def", "arrange_plots_on_one_canvas", "(", "FigureAxTupleArray", ",", "title", "=", "''", ",", "SubtitleArray", "=", "[", "]", ",", "show_fig", "=", "True", ")", ":", "if", "SubtitleArray", "==", "[", "]", ":", "SubtitleArray", "=", "[", "\"Plot {}\"", ".", ...	42.333333	19.166667
def _competition(self, x): """! @brief Calculates neuron winner (distance, neuron index). @param[in] x (list): Input pattern from the input data set, for example it can be coordinates of point. @return (uint) Returns index of neuron that is winner. ...	[ "def", "_competition", "(", "self", ",", "x", ")", ":", "index", "=", "0", "minimum", "=", "euclidean_distance_square", "(", "self", ".", "_weights", "[", "0", "]", ",", "x", ")", "for", "i", "in", "range", "(", "1", ",", "self", ".", "_size", ",",...	33.05	22.1
def rpcexec(self, payload): """ Manual execute a command on API (internally used) param str payload: The payload containing the request return: Servers answer to the query rtype: json raises RPCConnection: if no connction can be made raises Unauthoriz...	[ "def", "rpcexec", "(", "self", ",", "payload", ")", ":", "try", ":", "response", "=", "requests", ".", "post", "(", "\"http://{}:{}/rpc\"", ".", "format", "(", "self", ".", "host", ",", "self", ".", "port", ")", ",", "data", "=", "json", ".", "dumps"...	41.682927	17.731707
def download_image(self, handle, dest): """ Downloads the image from the http server Args: handle (str): url from the `self.baseurl` to the remote template dest (str): Path to store the downloaded url to, must be a file path Returns: ...	[ "def", "download_image", "(", "self", ",", "handle", ",", "dest", ")", ":", "with", "log_utils", ".", "LogTask", "(", "'Download image %s'", "%", "handle", ",", "logger", "=", "LOGGER", ")", ":", "self", ".", "open_url", "(", "url", "=", "handle", ",", ...	30.25	21.5
def start(self, show_exit_option=None): """ Start the menu in a new thread and allow the user to interact with it. The thread is a daemon, so :meth:`join()<consolemenu.ConsoleMenu.join>` should be called if there's a possibility that the main thread will exit before the menu is done ...	[ "def", "start", "(", "self", ",", "show_exit_option", "=", "None", ")", ":", "self", ".", "previous_active_menu", "=", "ConsoleMenu", ".", "currently_active_menu", "ConsoleMenu", ".", "currently_active_menu", "=", "None", "self", ".", "should_exit", "=", "False", ...	35	24.870968
def _pop_indent_stack(self, node, node_type=None, action=None): """Get callable full name.""" indent = self._get_indent(node) indent_stack = copy.deepcopy(self._indent_stack) # Find enclosing scope while (len(indent_stack) > 1) and ( ( (indent <= inden...	[ "def", "_pop_indent_stack", "(", "self", ",", "node", ",", "node_type", "=", "None", ",", "action", "=", "None", ")", ":", "indent", "=", "self", ".", "_get_indent", "(", "node", ")", "indent_stack", "=", "copy", ".", "deepcopy", "(", "self", ".", "_in...	33.022222	13.577778
def main(): """Main entry point.""" # Build default paths for files. dirs = appdirs.AppDirs('hangups', 'hangups') default_log_path = os.path.join(dirs.user_log_dir, 'hangups.log') default_token_path = os.path.join(dirs.user_cache_dir, 'refresh_token.txt') default_config_path = 'hangups.conf' ...	[ "def", "main", "(", ")", ":", "# Build default paths for files.", "dirs", "=", "appdirs", ".", "AppDirs", "(", "'hangups'", ",", "'hangups'", ")", "default_log_path", "=", "os", ".", "path", ".", "join", "(", "dirs", ".", "user_log_dir", ",", "'hangups.log'", ...	45.204545	19
def synchronise(func): """ If task already queued, running, or finished, don't restart. """ def inner(request, *args): lock_id = '%s-%s-built-%s' % ( datetime.date.today(), func.__name__, ",".join([str(a) for a in args])) if cache.add(lock_id, 'true', LOCK_EXPIRE): ...	[ "def", "synchronise", "(", "func", ")", ":", "def", "inner", "(", "request", ",", "*", "args", ")", ":", "lock_id", "=", "'%s-%s-built-%s'", "%", "(", "datetime", ".", "date", ".", "today", "(", ")", ",", "func", ".", "__name__", ",", "\",\"", ".", ...	32.090909	12.818182
def normalize_arxiv_category(category): """Normalize arXiv category to be schema compliant. This properly capitalizes the category and replaces the dash by a dot if needed. If the category is obsolete, it also gets converted it to its current equivalent. Example: >>> from inspire_schemas.u...	[ "def", "normalize_arxiv_category", "(", "category", ")", ":", "category", "=", "_NEW_CATEGORIES", ".", "get", "(", "category", ".", "lower", "(", ")", ",", "category", ")", "for", "valid_category", "in", "valid_arxiv_categories", "(", ")", ":", "if", "(", "c...	38.894737	22.578947
def installFS(rh, vaddr, mode, fileSystem, diskType): """ Install a filesystem on a virtual machine's dasd. Input: Request Handle: userid - Userid that owns the disk Virtual address as known to the owning system. Access mode to use to get the disk. Disk Type - 3390 or ...	[ "def", "installFS", "(", "rh", ",", "vaddr", ",", "mode", ",", "fileSystem", ",", "diskType", ")", ":", "rh", ".", "printSysLog", "(", "\"Enter vmUtils.installFS, userid: \"", "+", "rh", ".", "userid", "+", "\", vaddr: \"", "+", "str", "(", "vaddr", ")", "...	37.759197	12.280936
def Unlock(fd, path): """Release the lock on the file. Args: fd: int, the file descriptor of the file to unlock. path: string, the name of the file to lock. Raises: IOError, raised from flock while attempting to release a file lock. """ try: fcntl.flock(fd, fcntl.LOCK_UN \| fcntl.LOCK_NB) e...	[ "def", "Unlock", "(", "fd", ",", "path", ")", ":", "try", ":", "fcntl", ".", "flock", "(", "fd", ",", "fcntl", ".", "LOCK_UN", "\|", "fcntl", ".", "LOCK_NB", ")", "except", "IOError", "as", "e", ":", "if", "e", ".", "errno", "==", "errno", ".", ...	30.529412	22.352941
def fit(self, X, y): """Fit the model using X as training data and y as target values""" self._data = X self._classes = np.unique(y) self._labels = y self._is_fitted = True	[ "def", "fit", "(", "self", ",", "X", ",", "y", ")", ":", "self", ".", "_data", "=", "X", "self", ".", "_classes", "=", "np", ".", "unique", "(", "y", ")", "self", ".", "_labels", "=", "y", "self", ".", "_is_fitted", "=", "True" ]	29.571429	15.428571
def local(args: arg(container=list), cd=None, environ: arg(type=dict) = None, replace_env=False, paths=(), shell: arg(type=bool) = None, stdout: arg(type=StreamOptions) = None, stderr: arg(type=StreamOptions) = None, echo=False, r...	[ "def", "local", "(", "args", ":", "arg", "(", "container", "=", "list", ")", ",", "cd", "=", "None", ",", "environ", ":", "arg", "(", "type", "=", "dict", ")", "=", "None", ",", "replace_env", "=", "False", ",", "paths", "=", "(", ")", ",", "sh...	30.429907	20.682243
def validate_signature(self, filename): """Returns True if a valid signature is present for filename""" if not GPG_PRESENT: return False sigfilename = filename + '.sig' try: with open(sigfilename): pass except IOError: # Sig...	[ "def", "validate_signature", "(", "self", ",", "filename", ")", ":", "if", "not", "GPG_PRESENT", ":", "return", "False", "sigfilename", "=", "filename", "+", "'.sig'", "try", ":", "with", "open", "(", "sigfilename", ")", ":", "pass", "except", "IOError", "...	26.368421	18.105263
def parse_line(self, line: str): """ Parse a line from database :param line: line to parse """ for i in KEYPAIR_RE.finditer(line): key = i.group(1) value = urllib.parse.unquote(i.group(2)) self[key] = value	[ "def", "parse_line", "(", "self", ",", "line", ":", "str", ")", ":", "for", "i", "in", "KEYPAIR_RE", ".", "finditer", "(", "line", ")", ":", "key", "=", "i", ".", "group", "(", "1", ")", "value", "=", "urllib", ".", "parse", ".", "unquote", "(", ...	30.444444	6.444444

def search(self): """Returns the list of brains that match with the request criteria """ brains = [] # TODO Legacy for name, adapter in getAdapters((self.context, self.request), IReferenceWidgetVocabulary): brains.extend(adapte...

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def delete(self, comment_id, issue_id=None, repo_slug=None): """ Delete an issue from one of your repositories. """ issue_id = issue_id or self.issue_id repo_slug = repo_slug or self.bitbucket.repo_slug or '' url = self.bitbucket.url('DELETE_COMMENT', ...

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def missing_intervals(startdate, enddate, start, end, dateconverter=None, parseinterval=None, intervals=None): '''Given a ``startdate`` and an ``enddate`` dates, evaluate the date intervals from which data is not available. It return a list of ...

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def split_trailing_whitespace(word): """ This function takes a word, such as 'test\n\n' and returns ('test','\n\n') """ stripped_length = len(word.rstrip()) return word[0:stripped_length], word[stripped_length:]

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def proximal_arg_scaling(prox_factory, scaling): r"""Calculate the proximal of function F(x * scaling). Parameters ---------- prox_factory : callable A factory function that, when called with a step size, returns the proximal operator of ``F`` scaling : float or sequence of floats o...

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def rename(self): """ rename_expr ::= rename param_start rename_parameters param_stop expression rename_parameters ::= relation_name | paren_left attribute_list paren_right | relation_name paren_left attribute_list paren_right """ params = sel...

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def spectra(self, alpha=None, nmax=None, convention='power', unit='per_l', base=10.): """ Return the spectra of one or more Slepian functions. Usage ----- spectra = x.spectra([alpha, nmax, convention, unit, base]) Returns ------- spectra ...

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def positions(self, reverse=False): """returns a generator that walks the positions of this tree in DFO""" def Posgen(reverse): if reverse: lastrootsib = self.last_sibling_position(self.root) current = self.last_decendant(lastrootsib) while cur...

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def add_url_rule(self, rule, endpoint=None, view_func=None, provide_automatic_options=None, register_with_babel=False, **options): """ Like :meth:`~flask.Flask.add_url_rule`, but if ``register_with_babel`` is True, then we also allow the Babel Bundle an ...

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def activate(locale): """ Override django's utils.translation.activate(). Django forces files to be named django.mo (http://code.djangoproject.com/ticket/6376). Since that's dumb and we want to be able to load different files depending on what part of the site the user is in, we'll make our own fu...

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def set_key_color(self, color: Tuple[int, int, int]) -> None: """Set a color to be transparent during blitting functions. Args: color (Union[Tuple[int, int, int], Sequence[int]]): An (r, g, b) sequence or Color instance. """ lib.TCOD_image_set_key_color(self....

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41

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def get_hypervisor(): ''' Returns the name of the hypervisor running on this node or ``None``. Detected hypervisors: - kvm - xen - bhyve CLI Example: .. code-block:: bash salt '*' virt.get_hypervisor .. versionadded:: 2019.2.0 the function and the ``kvm``, ``xen...

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def requires_authentication(fn): """ Requires that the calling Subject be authenticated before allowing access. :raises UnauthenticatedException: indicating that the decorated method is not allowed to be executed because the ...

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def fetchEC2InstanceDict(regionNickname=None): """ Fetches EC2 instances types by region programmatically using the AWS pricing API. See: https://aws.amazon.com/blogs/aws/new-aws-price-list-api/ :return: A dict of InstanceType objects, where the key is the string: aws instance name (examp...

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def get_csv_from_metadata(dsn, d): """ Two goals. Get all csv from metadata, and return new metadata with generated filenames to match files. :param str dsn: Dataset name :param dict d: Metadata :return dict _csvs: Csv """ logger_csvs.info("enter get_csv_from_metadata") _csvs = OrderedD...

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def execute(self, arg_str='', **kwargs): """runs the passed in arguments and returns an iterator on the output of running command""" cmd = "{} {} {}".format(self.cmd_prefix, self.script, arg_str) expected_ret_code = kwargs.pop('code', 0) # any kwargs with all capital letters sho...

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def filter(self, source_file, encoding): # noqa A001 """Parse XML file.""" sources = [] for content, filename, enc in self.get_content(source_file): self.additional_context = self.get_context(filename) sources.extend(self._filter(content, source_file, enc)) retu...

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def process_user_input(self): """ This overrides the method in ConsoleMenu to allow for comma-delimited and range inputs. Examples: All of the following inputs would have the same result: * 1,2,3,4 * 1-4 * 1-2,3-4 * 1 -...

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def stop(state, host, ctid): ''' Stop OpenVZ containers. + ctid: CTID of the container to stop ''' args = ['{0}'.format(ctid)] yield 'vzctl stop {0}'.format(' '.join(args))

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19

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def parse_cfg(self): """ parses the given config file for experiments. """ self.cfgparser = ConfigParser() if not self.cfgparser.read(self.options.config): raise SystemExit('config file %s not found.'%self.options.config) # Change the current working directory to be relativ...

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def load_pickle(file_path): """ Unpickle some data from a given path. Input: - file_path: Target file path. Output: - data: The python object that was serialized and stored in disk. """ pkl_file = open(file_path, 'rb') data = pickle.load(pkl_file) pkl_file.close() return data

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def advance_to_checkpoint(self, checkpoint): """ Advance to the specified checkpoint, passing all preceding checkpoints including the specified checkpoint. """ if checkpoint in self._checkpoints: for cp in self._checkpoints: self.insert(cp) if ...

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def want_release(self): """Does the user normally want to release this package. Some colleagues find it irritating to have to remember to answer the question "Check out the tag (for tweaks or pypi/distutils server upload)" with the non-default 'no' when in 99 percent of the case...

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def gaussian1d_moments(data, mask=None): """ Estimate 1D Gaussian parameters from the moments of 1D data. This function can be useful for providing initial parameter values when fitting a 1D Gaussian to the ``data``. Parameters ---------- data : array_like (1D) The 1D array. m...

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def find(self, s): """Locates the leader of the set to which the element ``s`` belongs. Parameters ---------- s : object An object that the ``UnionFind`` contains. Returns ------- object The leader of the set that contains ``s``. ...

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def instruction_to_svg_dict(self, instruction_or_id, copy_result=True): """Return the SVG dict for the SVGBuilder. :param instruction_or_id: the instruction or id, see :meth:`get_instruction_id` :param bool copy_result: whether to copy the result :rtype: dict The resu...

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def visit(cls, value, value_type=None, **kwargs): """A value visitor, which visits instances (typically), applies :py:meth:`normalize.visitor.VisitorPattern.apply` to every attribute slot, and returns the reduced result. Like :py:func:`normalize.diff.diff`, this function accepts a serie...

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def _is_target_region(self, stat, game_region): """Returns if the stat matches target game region. :param stat: Json of gameplay stat. :type stat: dict :param game_region: Target game region. :type game_region: str :return: return does the stat...

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def string_to_34_array(sou=None, pin=None, man=None, honors=None): """ Method to convert one line string tiles format to the 34 array We need it to increase readability of our tests """ results = TilesConverter.string_to_136_array(sou, pin, man, honors) results = TilesCon...

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def getSamplingStrategy(self, serviceName): """ Parameters: - serviceName """ self._seqid += 1 future = self._reqs[self._seqid] = concurrent.Future() self.send_getSamplingStrategy(serviceName) return future

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def iterfiles(service, name=None, mimeType=SHEET, order=FILEORDER): """Fetch and yield ``(id, name)`` pairs for Google drive files.""" params = {'orderBy': order, 'pageToken': None} q = [] if name is not None: q.append("name='%s'" % name) if mimeType is not None: q.append("mimeType='...

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def format_ubuntu_dialog(df): """ Print statements paired with replies, formatted for easy review """ s = '' for i, record in df.iterrows(): statement = list(split_turns(record.Context))[-1] # <1> reply = list(split_turns(record.Utterance))[-1] # <2> s += 'Statement: {}\n'.format(s...

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def is_time_valid(self, timestamp): """Check if time is valid for this Timerange If sec_from_morning is not provided, get the value. :param timestamp: time to check :type timestamp: int :return: True if time is valid (in interval), False otherwise :rtype: bool "...

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def set_baseline(self, version): """Set the baseline into the creation information table version: str The version of the current database to set in the information table. The baseline must be in the format x.x.x where x are numbers. """ pattern = re.compile(r"^\d...

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def _synthesize(self): """ Assigns all placeholder labels to actual values and implicitly declares the ``ro`` register for backwards compatibility. Changed in 1.9: Either all qubits must be defined or all undefined. If qubits are undefined, this method will not help you. You mus...

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def bootstrap_isc(iscs, pairwise=False, summary_statistic='median', n_bootstraps=1000, ci_percentile=95, random_state=None): """One-sample group-level bootstrap hypothesis test for ISCs For ISCs from one more voxels or ROIs, resample subjects with replacement to construct a bootstrap dis...

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39.763158

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def parse_yes_no_str(bool_str): """Parse a string serialization of boolean data as yes (Y) or no (N). Prase a string serialization of boolean data where True is "Y" and False is "N" case-insensitive. @param bool_str: The string to parse. @type bool_str: str @return: The interpreted string. ...

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def write_groovy_script_and_configs( filename, content, job_configs, view_configs=None): """Write out the groovy script and configs to file. This writes the reconfigure script to the file location and places the expanded configs in subdirectories 'view_configs' / 'job_configs' that the script c...

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def graph( model, format='raw', prog='dot', path=None, name=None, consts=False, legend=False, collapse_deterministics=False, collapse_potentials=False, label_edges=True): """ graph( model, format='raw', prog='dot', path=None, name=None, co...

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def iteritems(self, multi=False): """Like :meth:`items` but returns an iterator.""" for key, values in dict.iteritems(self): if multi: for value in values: yield key, value else: yield key, values[0]

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35.5

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def _post_connect(self): """Initialize authentication when the connection is established and we are the initiator.""" if not self.initiator: if "plain" in self.auth_methods or "digest" in self.auth_methods: self.set_iq_get_handler("query","jabber:iq:auth", ...

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def init_logs(): """Initiate log file.""" start_time = dt.fromtimestamp(time.time()).strftime('%Y%m%d_%H%M') logname = os.path.join(os.path.expanduser("~") + "/nanoGUI_" + start_time + ".log") handlers = [logging.FileHandler(logname)] logging.basicConfig( format='%(asctime)s %(message)s', ...

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def session(self): """ Creates a context with an open SQLAlchemy session. """ engine = self.engine connection = engine.connect() db_session = scoped_session( sessionmaker(autocommit=False, autoflush=True, bind=engine)) yield db_session db_session.close...

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34

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def domain_create(self, domain, master=True, **kwargs): """ Registers a new Domain on the acting user's account. Make sure to point your registrar to Linode's nameservers so that Linode's DNS manager will correctly serve your domain. :param domain: The domain to register to Lin...

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33.37037

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def GetParent(self): """Constructs a path info corresponding to the parent of current path. The root path (represented by an empty list of components, corresponds to `/` on Unix-like systems) does not have a parent. Returns: Instance of `rdf_objects.PathInfo` or `None` if parent does not exist. ...

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29.3125

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def create(dataset, target, features=None, max_iterations=10, validation_set='auto', class_weights = None, max_depth=6, step_size=0.3, min_loss_reduction=0.0, min_child_weight=0.1, row_subsample=1.0, column_subsample=1.0, verbose=True, ...

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46.322751

25.634921

def to_json(content, indent=None): """ Serializes a python object as JSON This method uses the DJangoJSONEncoder to to ensure that python objects such as Decimal objects are properly serialized. It can also serialize Django QuerySet objects. """ if isinstance(content, QuerySet): jso...

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42.277778

23.277778

def health_check(self): """ Pull health and alarm information from the device. Purpose: Grab the cpu/mem usage, system/chassis alarms, top 5 | processes, and states if the primary/backup partitions are on | different versions. @returns: The output that should be s...

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50.382979

20.446809

def fun_as_arg(self, x, *args): """``fun_as_arg(x, fun, *more_args)`` calls ``fun(x, *more_args)``. Use case:: fmin(cma.fun_as_arg, args=(fun,), gradf=grad_numerical) calls fun_as_args(x, args) and grad_numerical(x, fun, args=args) """ fun = args[0] more_a...

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29.307692

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def run_process(cwd, args): """Executes an external process via subprocess.Popen""" try: process = check_output(args, cwd=cwd, stderr=STDOUT) return process except CalledProcessError as e: log('Uh oh, the teapot broke again! Error:', e, type(e), lvl=verbose, pretty=True) log...

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37.9

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def new_kitchen(): """Create LittleChef directory structure (Kitchen)""" def _mkdir(d, content=""): if not os.path.exists(d): os.mkdir(d) # Add a README so that it can be added to version control readme_path = os.path.join(d, 'README') if not os.path.exist...

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41.230769

13.769231

def bear(a1, b1, a2, b2): """Find bearing/position angle between two points on a unit sphere. Parameters ---------- a1, b1 : float Longitude-like and latitude-like angles defining the first point. Both are in radians. a2, b2 : float Longitude-like and latitude-like angles d...

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30

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def _create_auth(team, timeout=None): """ Reads the credentials, updates the access token if necessary, and returns it. """ url = get_registry_url(team) contents = _load_auth() auth = contents.get(url) if auth is not None: # If the access token expires within a minute, update it. ...

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34.772727

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def get_base_info(self, obj): """Returns the base info of an object """ if obj is None: return {} info = { "id": obj.getId(), "uid": obj.UID(), "title": obj.Title(), "description": obj.Description(), "url": obj.abso...

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23.2

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def _process_neg_flux(self, x, y): """Remove negative flux.""" if self._keep_neg: # Nothing to do return y old_y = None if np.isscalar(y): # pragma: no cover if y < 0: n_neg = 1 old_x = x old_y = y ...

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30.666667

19.727273

def scoped_format(txt, **objects): """Format a string with respect to a set of objects' attributes. Example: >>> Class Foo(object): >>> def __init__(self): >>> self.name = "Dave" >>> print scoped_format("hello {foo.name}", foo=Foo()) hello Dave Args: ...

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38.521739

19.869565

def reconnect(self, conn_retries=None): ''' Connects to Redis with a exponential waiting (3**n) ''' if conn_retries is None: conn_retries = self.conn_retries count = 0 if self.logger: self.logger.info('Connecting to Redis..') while count < conn_re...

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37.818182

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def all(self, query=None, **kwargs): """ Gets all organizations. """ return super(OrganizationsProxy, self).all(query=query)

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25.333333

12.666667

def user(self): """ Return a (deferred) cached Koji user name for this change. """ # Note, do any tasks really have an "owner_id", or are they all # "owner"? owner_id = getattr(self.task, 'owner_id', self.task.owner) return self.task.connection.cache.user_name(owner_id)

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50.833333

20.833333

def split_path_and_file(s): """ Given a full path to a file, split and return a path and filename :param str s: Path :return str _path: Directory Path :return str _filename: Filename """ _path = s _filename = "" try: x = os.path.split(s) _path = x[0] _filenam...

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22.611111

17.388889

def arrow_head(document, x0, y0, x1, y1, arrowshape): "make arrow head at (x1,y1), arrowshape is tuple (d1, d2, d3)" import math dx = x1 - x0 dy = y1 - y0 poly = document.createElement('polygon') d = math.sqrt(dx*dx + dy*dy) if d == 0.0: # XXX: equal, no "close enough" return poly try: d1, d2, d3 = l...

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19.058824

24.823529

def handleEvent(self, event): """This method should be called every time through the main loop. It handles all of the keyboard key actions Parameters: | eventObj - the event object obtained by calling pygame.event.get() Returns: | False most of the tim...

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41.666667

25

def _construct_end_index( spansStartingFrom ): ''' Creates an index which stores all annotations (from spansStartingFrom) by their end position in text (annotation[END]). Each start position (in the index) is associated with a list of annotation objects (annotations ending at that...

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48.711111

20.444444

def CopyToPath(self): """Copies the shell items to a path. Returns: str: converted shell item list path or None. """ number_of_path_segments = len(self._path_segments) if number_of_path_segments == 0: return None strings = [self._path_segments[0]] number_of_path_segments -= 1 ...

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33.333333

17

def analyze_modules(project, task_handle=taskhandle.NullTaskHandle()): """Perform static object analysis on all python files in the project Note that this might be really time consuming. """ resources = project.get_python_files() job_set = task_handle.create_jobset('Analyzing Modules', len(resource...

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41.818182

12.818182

def cli(env): """Print environment variables.""" filtered_vars = dict([(k, v) for k, v in env.vars.items() if not k.startswith('_')]) env.fout(formatting.iter_to_table(filtered_vars))

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40.333333

12.333333

def metal_complexation(metals, metal_binding_lig, metal_binding_bs): """Find all metal complexes between metals and appropriate groups in both protein and ligand, as well as water""" data = namedtuple('metal_complex', 'metal metal_orig_idx metal_type target target_orig_idx target_type ' ...

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60.738562

30.026144

def do_workers(self, args): '''list all known workers''' workers = self.task_master.workers(alive=not args.all) for k in sorted(workers.iterkeys()): self.stdout.write('{0} ({1})\n'.format(k, workers[k])) if args.details: heartbeat = self.task_master.get_he...

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49.333333

15.777778

def add_lb_secgroup(self, lb_name, hosts, port): """ Used by the load balancer deployer to register a hostname for a load balancer, in order that security group rules can be applied later. This is multiprocess-safe, but since keys are accessed only be a single load balancer deplo...

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43.6

26

def get_commit(self, sha): """ :calls: `GET /repos/:owner/:repo/commits/:sha <http://developer.github.com/v3/repos/commits>`_ :param sha: string :rtype: :class:`github.Commit.Commit` """ assert isinstance(sha, (str, unicode)), sha headers, data = self._requester.r...

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40.166667

18.5

def length(self): """Gets length :return: How many items in linked list of linked list """ item = self.head counter = 0 while item is not None: counter += 1 item = item.next_node return counter

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20.307692

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def get_current_roles(): """ Determines the list of roles, that the current host is assigned to. If ``env.roledefs`` is not set, an empty list is returned. :return: List of roles of the current host. :rtype: list """ current_host = env.host_string roledefs = env.get('roledefs') if r...

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def write_zip( src_fs, # type: FS file, # type: Union[Text, BinaryIO] compression=zipfile.ZIP_DEFLATED, # type: int encoding="utf-8", # type: Text walker=None, # type: Optional[Walker] ): # type: (...) -> None """Write the contents of a filesystem to a zip file. Arguments: ...

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def schema(self, schema): """Specifies the input schema. Some data sources (e.g. JSON) can infer the input schema automatically from data. By specifying the schema here, the underlying data source can skip the schema inference step, and thus speed up data loading. :param schema...

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def from_file(cls, fmt, filename=None, structure_file=None, are_coops=False): """ Creates a CompleteCohp object from an output file of a COHP calculation. Valid formats are either LMTO (for the Stuttgart LMTO-ASA code) or LOBSTER (for the LOBSTER code). Args: ...

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def _init_valid_functions(action_dimensions): """Initialize ValidFunctions and set up the callbacks.""" sizes = { "screen": tuple(int(i) for i in action_dimensions.screen), "screen2": tuple(int(i) for i in action_dimensions.screen), "minimap": tuple(int(i) for i in action_dimensions.minimap), } ...

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def process_response(self, req, resp, resource): """ Serializes ``req.context['result']`` to resp.body as JSON. If :attr:`~zengine.settings.DEBUG` is True, ``sys._debug_db_queries`` (set by pyoko) added to response. """ if 'result' not in req.context: return...

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def get_by_name(self, name): """ Gets a SAN Manager by name. Args: name: Name of the SAN Manager Returns: dict: SAN Manager. """ san_managers = self._client.get_all() result = [x for x in san_managers if x['name'] == name] return ...

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def metadata(func): """Add metadata to an item. Decorator that adds metadata to a given item such as the gelk revision used. """ @functools.wraps(func) def decorator(self, *args, **kwargs): eitem = func(self, *args, **kwargs) metadata = { 'metadata__gelk_version': s...

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def wrapper__ignore(self, type_): """ Selectively ignore certain types when wrapping attributes. :param class type: The class/type definition to ignore. :rtype list(type): The current list of ignored types """ if type_ not in self.__exclusion_list: self.__ex...

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def is_data_value(searchpath, searchtree, dtype = None, empty_is_false = False): """ Follow searchpath through the datatree in searchtree and report if there exists a value of type dtype searchpath is a list of keys/indices If dtype is None check for any value you can also supply a tuple to dty...

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def save_institute(self, institute): """ Called when institute is created/updated. """ name = institute.name logger.debug("save_institute '%s'" % name) # institute created # institute updated if institute.is_active: # date_deleted is not set, user should exi...

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def obj2bunch(data, commdct, obj): """make a new bunch object using the data object""" dtls = data.dtls key = obj[0].upper() key_i = dtls.index(key) abunch = makeabunch(commdct, obj, key_i) return abunch

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def is_bad_chunk(self, chunk_meta, grp, pug, chk): """Check the chunk is offline or not""" meta = self.get_chunk_meta_item(chunk_meta, grp, pug, chk) if meta.CS & 0x8 != 0: return True return False

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def send_request(self, message): """Send message request to HANA db and return reply message :param message: Instance of Message object containing segments and parts of a HANA db request :returns: Instance of reply Message object """ payload = message.pack() # obtain BytesIO ins...

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def arrange_plots_on_one_canvas(FigureAxTupleArray, title='', SubtitleArray = [], show_fig=True): """ Arranges plots, given in an array of tuples consisting of fig and axs, onto a subplot-figure consisting of 2 horizontal times the lenght of the passed (fig,axs)-array divided by 2 vertical subplots ...

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def _competition(self, x): """! @brief Calculates neuron winner (distance, neuron index). @param[in] x (list): Input pattern from the input data set, for example it can be coordinates of point. @return (uint) Returns index of neuron that is winner. ...

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def rpcexec(self, payload): """ Manual execute a command on API (internally used) param str payload: The payload containing the request return: Servers answer to the query rtype: json raises RPCConnection: if no connction can be made raises Unauthoriz...

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def download_image(self, handle, dest): """ Downloads the image from the http server Args: handle (str): url from the `self.baseurl` to the remote template dest (str): Path to store the downloaded url to, must be a file path Returns: ...

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def start(self, show_exit_option=None): """ Start the menu in a new thread and allow the user to interact with it. The thread is a daemon, so :meth:`join()<consolemenu.ConsoleMenu.join>` should be called if there's a possibility that the main thread will exit before the menu is done ...

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def _pop_indent_stack(self, node, node_type=None, action=None): """Get callable full name.""" indent = self._get_indent(node) indent_stack = copy.deepcopy(self._indent_stack) # Find enclosing scope while (len(indent_stack) > 1) and ( ( (indent <= inden...

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def main(): """Main entry point.""" # Build default paths for files. dirs = appdirs.AppDirs('hangups', 'hangups') default_log_path = os.path.join(dirs.user_log_dir, 'hangups.log') default_token_path = os.path.join(dirs.user_cache_dir, 'refresh_token.txt') default_config_path = 'hangups.conf' ...

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def synchronise(func): """ If task already queued, running, or finished, don't restart. """ def inner(request, *args): lock_id = '%s-%s-built-%s' % ( datetime.date.today(), func.__name__, ",".join([str(a) for a in args])) if cache.add(lock_id, 'true', LOCK_EXPIRE): ...

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def normalize_arxiv_category(category): """Normalize arXiv category to be schema compliant. This properly capitalizes the category and replaces the dash by a dot if needed. If the category is obsolete, it also gets converted it to its current equivalent. Example: >>> from inspire_schemas.u...

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def installFS(rh, vaddr, mode, fileSystem, diskType): """ Install a filesystem on a virtual machine's dasd. Input: Request Handle: userid - Userid that owns the disk Virtual address as known to the owning system. Access mode to use to get the disk. Disk Type - 3390 or ...

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def Unlock(fd, path): """Release the lock on the file. Args: fd: int, the file descriptor of the file to unlock. path: string, the name of the file to lock. Raises: IOError, raised from flock while attempting to release a file lock. """ try: fcntl.flock(fd, fcntl.LOCK_UN | fcntl.LOCK_NB) e...

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def fit(self, X, y): """Fit the model using X as training data and y as target values""" self._data = X self._classes = np.unique(y) self._labels = y self._is_fitted = True

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def local(args: arg(container=list), cd=None, environ: arg(type=dict) = None, replace_env=False, paths=(), shell: arg(type=bool) = None, stdout: arg(type=StreamOptions) = None, stderr: arg(type=StreamOptions) = None, echo=False, r...

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def validate_signature(self, filename): """Returns True if a valid signature is present for filename""" if not GPG_PRESENT: return False sigfilename = filename + '.sig' try: with open(sigfilename): pass except IOError: # Sig...

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def parse_line(self, line: str): """ Parse a line from database :param line: line to parse """ for i in KEYPAIR_RE.finditer(line): key = i.group(1) value = urllib.parse.unquote(i.group(2)) self[key] = value

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