kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def to_jd(year, month, day): '''Convert a Positivist date to Julian day count.''' legal_date(year, month, day) gyear = year + YEAR_EPOCH - 1 return ( gregorian.EPOCH - 1 + (365 * (gyear - 1)) + floor((gyear - 1) / 4) + (-floor((gyear - 1) / 100)) + floor((gyear - 1) / 400) + (mo...	[ "def", "to_jd", "(", "year", ",", "month", ",", "day", ")", ":", "legal_date", "(", "year", ",", "month", ",", "day", ")", "gyear", "=", "year", "+", "YEAR_EPOCH", "-", "1", "return", "(", "gregorian", ".", "EPOCH", "-", "1", "+", "(", "365", "*"...	33.6	19.6
def discover_json(self): """Discovers the JSON format and registers it if available. To speed up JSON parsing and composing, install `simplejson`:: pip install simplejson The standard library module `json` will be used by default. """ try: import simple...	[ "def", "discover_json", "(", "self", ")", ":", "try", ":", "import", "simplejson", "as", "json", "except", "ImportError", ":", "import", "json", "self", ".", "register", "(", "'json'", ",", "json", ".", "loads", ",", "json", ".", "dumps", ")" ]	30.357143	19.5
def install_os_snaps(snaps, refresh=False): """Install OpenStack snaps from channel and with mode @param snaps: Dictionary of snaps with channels and modes of the form: {'snap_name': {'channel': 'snap_channel', 'mode': 'snap_mode'}} Where channel is a snapstore channel an...	[ "def", "install_os_snaps", "(", "snaps", ",", "refresh", "=", "False", ")", ":", "def", "_ensure_flag", "(", "flag", ")", ":", "if", "flag", ".", "startswith", "(", "'--'", ")", ":", "return", "flag", "return", "'--{}'", ".", "format", "(", "flag", ")"...	35.962963	18.62963
def add_status_line(self, label): """Add a status bar line to the table. This function returns the status bar and it can be modified from this return value. """ status_line = StatusBar(label, self._sep_start, self._sep_end, ...	[ "def", "add_status_line", "(", "self", ",", "label", ")", ":", "status_line", "=", "StatusBar", "(", "label", ",", "self", ".", "_sep_start", ",", "self", ".", "_sep_end", ",", "self", ".", "_fill_char", ")", "self", ".", "_lines", ".", "append", "(", ...	36.545455	11.909091
def do_region(self, x, y, w, h): """Apply region selection.""" if (x is None): self.logger.debug("region: full (nop)") else: self.logger.debug("region: (%d,%d,%d,%d)" % (x, y, w, h)) self.image = self.image.crop((x, y, x + w, y + h)) self.width = w...	[ "def", "do_region", "(", "self", ",", "x", ",", "y", ",", "w", ",", "h", ")", ":", "if", "(", "x", "is", "None", ")", ":", "self", ".", "logger", ".", "debug", "(", "\"region: full (nop)\"", ")", "else", ":", "self", ".", "logger", ".", "debug", ...	37.777778	15.666667
def _wait_new_conf(self): """Ask the daemon to drop its configuration and wait for a new one This overrides the default method from GenericInterface :return: None """ with self.app.conf_lock: logger.warning("My master Arbiter wants me to wait for a new configuration...	[ "def", "_wait_new_conf", "(", "self", ")", ":", "with", "self", ".", "app", ".", "conf_lock", ":", "logger", ".", "warning", "(", "\"My master Arbiter wants me to wait for a new configuration.\"", ")", "self", ".", "app", ".", "cur_conf", "=", "{", "}" ]	34.9	20
def handle_purge(environ, start_response): """ Handle a PURGE request. """ from utils import is_valid_security, get_cached_files from settings import DEBUG server = environ['SERVER_NAME'] try: request_uri = get_path(environ) path_and_query = request_uri.lstrip("/") qu...	[ "def", "handle_purge", "(", "environ", ",", "start_response", ")", ":", "from", "utils", "import", "is_valid_security", ",", "get_cached_files", "from", "settings", "import", "DEBUG", "server", "=", "environ", "[", "'SERVER_NAME'", "]", "try", ":", "request_uri", ...	36.833333	13
def check_manifest (): """Snatched from roundup.sf.net. Check that the files listed in the MANIFEST are present when the source is unpacked.""" try: f = open('MANIFEST') except Exception: print('\n*** SOURCE WARNING: The MANIFEST file is missing!') return try: man...	[ "def", "check_manifest", "(", ")", ":", "try", ":", "f", "=", "open", "(", "'MANIFEST'", ")", "except", "Exception", ":", "print", "(", "'\\n*** SOURCE WARNING: The MANIFEST file is missing!'", ")", "return", "try", ":", "manifest", "=", "[", "l", ".", "strip"...	34.368421	21.210526
def send_batches(self, batch_list): """Sends a list of batches to the validator. Args: batch_list (:obj:`BatchList`): the list of batches Returns: dict: the json result data, as a dict """ if isinstance(batch_list, BaseMessage): batch_list = ...	[ "def", "send_batches", "(", "self", ",", "batch_list", ")", ":", "if", "isinstance", "(", "batch_list", ",", "BaseMessage", ")", ":", "batch_list", "=", "batch_list", ".", "SerializeToString", "(", ")", "return", "self", ".", "_post", "(", "'/batches'", ",",...	29.923077	18.307692
def knock_out(self): """Knockout gene by marking it as non-functional and setting all associated reactions bounds to zero. The change is reverted upon exit if executed within the model as context. """ self.functional = False for reaction in self.reactions: ...	[ "def", "knock_out", "(", "self", ")", ":", "self", ".", "functional", "=", "False", "for", "reaction", "in", "self", ".", "reactions", ":", "if", "not", "reaction", ".", "functional", ":", "reaction", ".", "bounds", "=", "(", "0", ",", "0", ")" ]	34.909091	11.909091
def concat_same_type(self, to_concat, placement=None): """ Concatenate list of single blocks of the same type. """ values = self._holder._concat_same_type( [blk.values for blk in to_concat]) placement = placement or slice(0, len(values), 1) return self.make_bl...	[ "def", "concat_same_type", "(", "self", ",", "to_concat", ",", "placement", "=", "None", ")", ":", "values", "=", "self", ".", "_holder", ".", "_concat_same_type", "(", "[", "blk", ".", "values", "for", "blk", "in", "to_concat", "]", ")", "placement", "=...	45.888889	12.333333
def bounding_box_from_annotation(source=None, padding=None, kwargs): """bounding_box_from_annotation(source, padding, kwargs) -> bounding_box Creates a bounding box from the given parameters, which are, in general, annotations read using :py:func:`bob.ip.facedetect.read_annotation_file`. Different kinds of a...	[ "def", "bounding_box_from_annotation", "(", "source", "=", "None", ",", "padding", "=", "None", ",", "", "", "kwargs", ")", ":", "if", "source", "is", "None", ":", "# try to estimate the source", "for", "s", ",", "k", "in", "available_sources", ".", "items...	45.673684	30.905263
def auto_thaw(vault_client, opt): """Will thaw into a temporary location""" icefile = opt.thaw_from if not os.path.exists(icefile): raise aomi.exceptions.IceFile("%s missing" % icefile) thaw(vault_client, icefile, opt) return opt	[ "def", "auto_thaw", "(", "vault_client", ",", "opt", ")", ":", "icefile", "=", "opt", ".", "thaw_from", "if", "not", "os", ".", "path", ".", "exists", "(", "icefile", ")", ":", "raise", "aomi", ".", "exceptions", ".", "IceFile", "(", "\"%s missing\"", ...	31.375	14.5
def transition(value, maximum, start, end): """ Transition between two values. :param value: Current iteration. :param maximum: Maximum number of iterations. :param start: Start value. :param end: End value. :returns: Transitional value. """ return round(start + (end - start) * value / ...	[ "def", "transition", "(", "value", ",", "maximum", ",", "start", ",", "end", ")", ":", "return", "round", "(", "start", "+", "(", "end", "-", "start", ")", "*", "value", "/", "maximum", ",", "2", ")" ]	32.2	10.7
def _write_config(self): '''Write the parameters to a file for PhantomJS to read.''' param_dict = { 'url': self._params.url, 'snapshot_paths': self._params.snapshot_paths, 'wait_time': self._params.wait_time, 'num_scrolls': self._params.num_scrolls, ...	[ "def", "_write_config", "(", "self", ")", ":", "param_dict", "=", "{", "'url'", ":", "self", ".", "_params", ".", "url", ",", "'snapshot_paths'", ":", "self", ".", "_params", ".", "snapshot_paths", ",", "'wait_time'", ":", "self", ".", "_params", ".", "w...	41.16129	18.967742
def _substitute(self, str): """ Substitute words in the string, according to the specified reflections, e.g. "I'm" -> "you are" :type str: str :param str: The string to be mapped :rtype: str """ if not self.attr.get("substitute",True):return str r...	[ "def", "_substitute", "(", "self", ",", "str", ")", ":", "if", "not", "self", ".", "attr", ".", "get", "(", "\"substitute\"", ",", "True", ")", ":", "return", "str", "return", "self", ".", "_regex", ".", "sub", "(", "lambda", "mo", ":", "self", "."...	33.846154	15.076923
def infer(self, data, initial_proposal=None, full_output=False,**kwargs): """ Infer the model parameters, given the data. auto_convergence=True, walkers=100, burn=2000, sample=2000, minimum_sample=2000, convergence_check_frequency=1000, a=2.0, threads=1, """ # ...	[ "def", "infer", "(", "self", ",", "data", ",", "initial_proposal", "=", "None", ",", "full_output", "=", "False", ",", "", "", "kwargs", ")", ":", "# Apply data masks now so we don't have to do it on the fly.", "data", ",", "pixels_affected", "=", "self", ".", ...	43.625786	22.745283
def list_active_vms(cwd=None): ''' Return a list of machine names for active virtual machine on the host, which are defined in the Vagrantfile at the indicated path. CLI Example: .. code-block:: bash salt '*' vagrant.list_active_vms cwd=/projects/project_1 ''' vms = [] cmd = ...	[ "def", "list_active_vms", "(", "cwd", "=", "None", ")", ":", "vms", "=", "[", "]", "cmd", "=", "'vagrant status'", "reply", "=", "__salt__", "[", "'cmd.shell'", "]", "(", "cmd", ",", "cwd", "=", "cwd", ")", "log", ".", "info", "(", "'--->\\n%s'", ","...	29.666667	21.47619
def redraw_current_line(self): """ Redraw the highlighted line """ if self.no_streams: return row = self.pads[self.current_pad].getyx()[0] s = self.filtered_streams[row] pad = self.pads['streams'] pad.move(row, 0) pad.clrtoeol() pad.addstr(row,...	[ "def", "redraw_current_line", "(", "self", ")", ":", "if", "self", ".", "no_streams", ":", "return", "row", "=", "self", ".", "pads", "[", "self", ".", "current_pad", "]", ".", "getyx", "(", ")", "[", "0", "]", "s", "=", "self", ".", "filtered_stream...	34.846154	12.153846
def cmd_wp_movemulti(self, args): '''handle wp move of multiple waypoints''' if len(args) < 3: print("usage: wp movemulti WPNUM WPSTART WPEND <rotation>") return idx = int(args[0]) if idx < 1 or idx > self.wploader.count(): print("Invalid wp number %u"...	[ "def", "cmd_wp_movemulti", "(", "self", ",", "args", ")", ":", "if", "len", "(", "args", ")", "<", "3", ":", "print", "(", "\"usage: wp movemulti WPNUM WPSTART WPEND <rotation>\"", ")", "return", "idx", "=", "int", "(", "args", "[", "0", "]", ")", "if", ...	41.930556	19.791667
def skew_y(self, y): """Skew element along the y-axis by the given angle. Parameters ---------- y : float y-axis skew angle in degrees """ self.root.set("transform", "%s skewY(%f)" % (self.root.get("transform") or '', y)) return ...	[ "def", "skew_y", "(", "self", ",", "y", ")", ":", "self", ".", "root", ".", "set", "(", "\"transform\"", ",", "\"%s skewY(%f)\"", "%", "(", "self", ".", "root", ".", "get", "(", "\"transform\"", ")", "or", "''", ",", "y", ")", ")", "return", "self"...	28.545455	16.272727
def enable(step: 'projects.ProjectStep'): """ Create a print equivalent function that also writes the output to the project page. The write_through is enabled so that the TextIOWrapper immediately writes all of its input data directly to the underlying BytesIO buffer. This is needed so that we can s...	[ "def", "enable", "(", "step", ":", "'projects.ProjectStep'", ")", ":", "# Prevent anything unusual from causing buffer issues", "restore_default_configuration", "(", ")", "stdout_interceptor", "=", "RedirectBuffer", "(", "sys", ".", "stdout", ")", "sys", ".", "stdout", ...	36.28	19.96
def classify_segmented_recording(recording, result_format=None): """Use this function if you are sure you have a single symbol. Parameters ---------- recording : string The recording in JSON format Returns ------- list of dictionaries Each dictionary contains the keys 'symb...	[ "def", "classify_segmented_recording", "(", "recording", ",", "result_format", "=", "None", ")", ":", "global", "single_symbol_classifier", "if", "single_symbol_classifier", "is", "None", ":", "single_symbol_classifier", "=", "SingleClassificer", "(", ")", "return", "si...	32.722222	19
def have_graph(self, graph): """Return whether I have a graph by this name.""" graph = self.pack(graph) return bool(self.sql('graphs_named', graph).fetchone()[0])	[ "def", "have_graph", "(", "self", ",", "graph", ")", ":", "graph", "=", "self", ".", "pack", "(", "graph", ")", "return", "bool", "(", "self", ".", "sql", "(", "'graphs_named'", ",", "graph", ")", ".", "fetchone", "(", ")", "[", "0", "]", ")" ]	45.75	11.5
def _build_model_factories(store): """Generate factories to construct objects from schemata""" result = {} for schemaname in store: schema = None try: schema = store[schemaname]['schema'] except KeyError: schemata_log("No schema found for ", schemaname, lv...	[ "def", "_build_model_factories", "(", "store", ")", ":", "result", "=", "{", "}", "for", "schemaname", "in", "store", ":", "schema", "=", "None", "try", ":", "schema", "=", "store", "[", "schemaname", "]", "[", "'schema'", "]", "except", "KeyError", ":",...	27.95	27.5
def remove_timex3s(self, list_timex_ids): """ Removes a list of terms from the layer @type list_timex_ids: list (of strings) @param list_timex_ids: list of timex identifier to be removed """ nodes_to_remove = set() for timex in self: if timex.get_id() ...	[ "def", "remove_timex3s", "(", "self", ",", "list_timex_ids", ")", ":", "nodes_to_remove", "=", "set", "(", ")", "for", "timex", "in", "self", ":", "if", "timex", ".", "get_id", "(", ")", "in", "list_timex_ids", ":", "nodes_to_remove", ".", "add", "(", "t...	40	12.588235
def createsnippet(self, project_id, title, file_name, code, visibility_level=0): """ Creates an snippet :param project_id: project id to create the snippet under :param title: title of the snippet :param file_name: filename for the snippet :param code: content of the sni...	[ "def", "createsnippet", "(", "self", ",", "project_id", ",", "title", ",", "file_name", ",", "code", ",", "visibility_level", "=", "0", ")", ":", "data", "=", "{", "'id'", ":", "project_id", ",", "'title'", ":", "title", ",", "'file_name'", ":", "file_na...	40.5	22.416667
def windowed_run_count(da, window, dim='time'): """Return the number of consecutive true values in array for runs at least as long as given duration. Parameters ---------- da: N-dimensional Xarray data array (boolean) Input data array window : int Minimum run le...	[ "def", "windowed_run_count", "(", "da", ",", "window", ",", "dim", "=", "'time'", ")", ":", "d", "=", "rle", "(", "da", ",", "dim", "=", "dim", ")", "out", "=", "d", ".", "where", "(", "d", ">=", "window", ",", "0", ")", ".", "sum", "(", "dim...	33	19.952381
def _get_encoder_method(stream_type): """A function to get the python type to device cloud type converter function. :param stream_type: The streams data type :return: A function that when called with the python object will return the serializable type for sending to the cloud. If there is no function f...	[ "def", "_get_encoder_method", "(", "stream_type", ")", ":", "if", "stream_type", "is", "not", "None", ":", "return", "DSTREAM_TYPE_MAP", ".", "get", "(", "stream_type", ".", "upper", "(", ")", ",", "(", "lambda", "x", ":", "x", ",", "lambda", "x", ":", ...	49.166667	24.666667
def start(track_file, twitter_api_key, twitter_api_secret, twitter_access_token, twitter_access_token_secret, poll_interval=15, unfiltered=False, languages=None, debug=False, outfile=None): """Start the stream.""" listener...	[ "def", "start", "(", "track_file", ",", "twitter_api_key", ",", "twitter_api_secret", ",", "twitter_access_token", ",", "twitter_access_token_secret", ",", "poll_interval", "=", "15", ",", "unfiltered", "=", "False", ",", "languages", "=", "None", ",", "debug", "=...	31.346154	17.076923
def fromurl(url): """ Parse patch from an URL, return False if an error occured. Note that this also can throw urlopen() exceptions. """ ps = PatchSet( urllib_request.urlopen(url) ) if ps.errors == 0: return ps return False	[ "def", "fromurl", "(", "url", ")", ":", "ps", "=", "PatchSet", "(", "urllib_request", ".", "urlopen", "(", "url", ")", ")", "if", "ps", ".", "errors", "==", "0", ":", "return", "ps", "return", "False" ]	26.777778	12.333333
def shift_christmas_boxing_days(self, year): """ When Christmas and/or Boxing Day falls on a weekend, it is rolled forward to the next weekday. """ christmas = date(year, 12, 25) boxing_day = date(year, 12, 26) boxing_day_label = "{} Shift".format(self.boxing_day_labe...	[ "def", "shift_christmas_boxing_days", "(", "self", ",", "year", ")", ":", "christmas", "=", "date", "(", "year", ",", "12", ",", "25", ")", "boxing_day", "=", "date", "(", "year", ",", "12", ",", "26", ")", "boxing_day_label", "=", "\"{} Shift\"", ".", ...	48.875	13.5
def reply_to(self) -> Optional[Sequence[AddressHeader]]: """The ``Reply-To`` header.""" try: return cast(Sequence[AddressHeader], self[b'reply-to']) except KeyError: return None	[ "def", "reply_to", "(", "self", ")", "->", "Optional", "[", "Sequence", "[", "AddressHeader", "]", "]", ":", "try", ":", "return", "cast", "(", "Sequence", "[", "AddressHeader", "]", ",", "self", "[", "b'reply-to'", "]", ")", "except", "KeyError", ":", ...	36.666667	17.333333
def logged_in(): """ Method called by Strava (redirect) that includes parameters. - state - code - error """ error = request.args.get('error') state = request.args.get('state') if error: return render_template('login_error.html', error=error) else: code = request....	[ "def", "logged_in", "(", ")", ":", "error", "=", "request", ".", "args", ".", "get", "(", "'error'", ")", "state", "=", "request", ".", "args", ".", "get", "(", "'state'", ")", "if", "error", ":", "return", "render_template", "(", "'login_error.html'", ...	40	25.238095
def factorize(self, show_progress=False, compute_w=True, compute_h=True, compute_err=True, robust_cluster=3, niter=1, robust_nselect=-1): """ Factorize s.t. WH = data Parameters ---------- show_progress : bool print some extra informatio...	[ "def", "factorize", "(", "self", ",", "show_progress", "=", "False", ",", "compute_w", "=", "True", ",", "compute_h", "=", "True", ",", "compute_err", "=", "True", ",", "robust_cluster", "=", "3", ",", "niter", "=", "1", ",", "robust_nselect", "=", "-", ...	40.02439	16.292683
def reduce_number(num): """Reduces the string representation of a number. If the number is of the format n.00..., returns n. If the decimal portion of the number has a repeating decimal, followed by up to two trailing numbers, such as: 0.3333333 or 0.343434346 It will return just one instance of th...	[ "def", "reduce_number", "(", "num", ")", ":", "parts", "=", "str", "(", "num", ")", ".", "split", "(", "\".\"", ")", "if", "len", "(", "parts", ")", "==", "1", "or", "parts", "[", "1", "]", "==", "\"0\"", ":", "return", "int", "(", "parts", "["...	21.852941	26.323529
def cartesian_to_spherical_azimuthal(x, y): """ Calculates the azimuthal angle in spherical coordinates from Cartesian coordinates. The azimuthal angle is in [0,2*pi]. Parameters ---------- x : {numpy.array, float} X-coordinate. y : {numpy.array, float} Y-coordinate. Return...	[ "def", "cartesian_to_spherical_azimuthal", "(", "x", ",", "y", ")", ":", "y", "=", "float", "(", "y", ")", "if", "isinstance", "(", "y", ",", "int", ")", "else", "y", "phi", "=", "numpy", ".", "arctan2", "(", "y", ",", "x", ")", "return", "phi", ...	25.842105	16.526316
def simplify_graph(graph): """ strips out everything but connectivity Args: graph (nx.Graph): Returns: nx.Graph: new_graph CommandLine: python3 -m utool.util_graph simplify_graph --show python2 -m utool.util_graph simplify_graph --show python2 -c "import n...	[ "def", "simplify_graph", "(", "graph", ")", ":", "import", "utool", "as", "ut", "nodes", "=", "sorted", "(", "list", "(", "graph", ".", "nodes", "(", ")", ")", ")", "node_lookup", "=", "ut", ".", "make_index_lookup", "(", "nodes", ")", "if", "graph", ...	33.294118	19.45098
def get_collection(self, qs, view_kwargs): """Retrieve a collection of objects through sqlalchemy :param QueryStringManager qs: a querystring manager to retrieve information from url :param dict view_kwargs: kwargs from the resource view :return tuple: the number of object and the list ...	[ "def", "get_collection", "(", "self", ",", "qs", ",", "view_kwargs", ")", ":", "self", ".", "before_get_collection", "(", "qs", ",", "view_kwargs", ")", "query", "=", "self", ".", "query", "(", "view_kwargs", ")", "if", "qs", ".", "filters", ":", "query"...	32.344828	23.62069
def expose(rule, **options): """Decorator to add an url rule to a function """ def decorator(f): if not hasattr(f, "urls"): f.urls = [] if isinstance(rule, (list, tuple)): f.urls.extend(rule) else: f.urls.append((rule, options)) return f ...	[ "def", "expose", "(", "rule", ",", "", "", "options", ")", ":", "def", "decorator", "(", "f", ")", ":", "if", "not", "hasattr", "(", "f", ",", "\"urls\"", ")", ":", "f", ".", "urls", "=", "[", "]", "if", "isinstance", "(", "rule", ",", "(", ...	27.25	11.583333
def _initialize_attributes(model_class, name, bases, attrs): """Initialize the attributes of the model.""" model_class._attributes = {} for k, v in attrs.iteritems(): if isinstance(v, Attribute): model_class._attributes[k] = v v.name = v.name or k	[ "def", "_initialize_attributes", "(", "model_class", ",", "name", ",", "bases", ",", "attrs", ")", ":", "model_class", ".", "_attributes", "=", "{", "}", "for", "k", ",", "v", "in", "attrs", ".", "iteritems", "(", ")", ":", "if", "isinstance", "(", "v"...	40.714286	6.857143
def active(self): """ Return the currently active :class:`~opentracing.Scope` which can be used to access the currently active :attr:`Scope.span`. :return: the :class:`~opentracing.Scope` that is active, or ``None`` if not available. """ context = se...	[ "def", "active", "(", "self", ")", ":", "context", "=", "self", ".", "_get_context", "(", ")", "if", "not", "context", ":", "return", "super", "(", "TornadoScopeManager", ",", "self", ")", ".", "active", "return", "context", ".", "active" ]	29.133333	17.933333
def _process_pong(self): """ Process PONG sent by server. """ if len(self._pongs) > 0: future = self._pongs.pop(0) future.set_result(True) self._pongs_received += 1 self._pings_outstanding -= 1	[ "def", "_process_pong", "(", "self", ")", ":", "if", "len", "(", "self", ".", "_pongs", ")", ">", "0", ":", "future", "=", "self", ".", "_pongs", ".", "pop", "(", "0", ")", "future", ".", "set_result", "(", "True", ")", "self", ".", "_pongs_receive...	29.444444	4.111111
def maybe_put_task(self): """Enqueue the next task, if there are any waiting.""" try: task = next(self.tasks) except StopIteration: pass else: log.debug('Putting %s on queue', task) self.task_queue.put(task)	[ "def", "maybe_put_task", "(", "self", ")", ":", "try", ":", "task", "=", "next", "(", "self", ".", "tasks", ")", "except", "StopIteration", ":", "pass", "else", ":", "log", ".", "debug", "(", "'Putting %s on queue'", ",", "task", ")", "self", ".", "tas...	31	13.666667
def buildMaskImage(rootname, bitvalue, output, extname='DQ', extver=1): """ Builds mask image from rootname's DQ array If there is no valid 'DQ' array in image, then return an empty string. """ # If no bitvalue is set or rootname given, assume no mask is desired # However, this name wou...	[ "def", "buildMaskImage", "(", "rootname", ",", "bitvalue", ",", "output", ",", "extname", "=", "'DQ'", ",", "extver", "=", "1", ")", ":", "# If no bitvalue is set or rootname given, assume no mask is desired", "# However, this name would be useful as the output mask from", "#...	34.318182	19.787879
def comments(self): # pylint: disable=E0202 """Return forest of comments, with top-level comments as tree roots. May contain instances of MoreComment objects. To easily replace these objects with Comment objects, use the replace_more_comments method then fetch this attribute. Use comme...	[ "def", "comments", "(", "self", ")", ":", "# pylint: disable=E0202", "if", "self", ".", "_comments", "is", "None", ":", "self", ".", "comments", "=", "Submission", ".", "from_url", "(", "# pylint: disable=W0212", "self", ".", "reddit_session", ",", "self", "."...	47.785714	22.714286
def p_return_expr(p): """ statement : RETURN expr """ if not FUNCTION_LEVEL: # At less one level syntax_error(p.lineno(1), 'Syntax Error: Returning value out of FUNCTION') p[0] = None return if FUNCTION_LEVEL[-1].kind is None: # This function was not correctly declared. ...	[ "def", "p_return_expr", "(", "p", ")", ":", "if", "not", "FUNCTION_LEVEL", ":", "# At less one level", "syntax_error", "(", "p", ".", "lineno", "(", "1", ")", ",", "'Syntax Error: Returning value out of FUNCTION'", ")", "p", "[", "0", "]", "=", "None", "return...	35.866667	27.533333
def delete(filething): """ delete(filething) Arguments: filething (filething) Raises: mutagen.MutagenError Remove tags from a file. """ t = OggTheora(filething) filething.fileobj.seek(0) t.delete(filething)	[ "def", "delete", "(", "filething", ")", ":", "t", "=", "OggTheora", "(", "filething", ")", "filething", ".", "fileobj", ".", "seek", "(", "0", ")", "t", ".", "delete", "(", "filething", ")" ]	17.428571	19.142857
def pdf(self, f, y, Y_metadata=None): """ Evaluates the link function link(f) then computes the likelihood (pdf) using it .. math: p(y\|\\lambda(f)) :param f: latent variables f :type f: Nx1 array :param y: data :type y: Nx1 array :param Y_met...	[ "def", "pdf", "(", "self", ",", "f", ",", "y", ",", "Y_metadata", "=", "None", ")", ":", "if", "isinstance", "(", "self", ".", "gp_link", ",", "link_functions", ".", "Identity", ")", ":", "return", "self", ".", "pdf_link", "(", "f", ",", "y", ",", ...	35.9	20.3
def list_tokens(opts): ''' List all tokens in the store. :param opts: Salt master config options :returns: List of dicts (tokens) ''' ret = [] for (dirpath, dirnames, filenames) in salt.utils.path.os_walk(opts['token_dir']): for token in filenames: ret.append(token) ...	[ "def", "list_tokens", "(", "opts", ")", ":", "ret", "=", "[", "]", "for", "(", "dirpath", ",", "dirnames", ",", "filenames", ")", "in", "salt", ".", "utils", ".", "path", ".", "os_walk", "(", "opts", "[", "'token_dir'", "]", ")", ":", "for", "token...	26.583333	21.416667
def cwtmorlet(points, width): """complex morlet wavelet function compatible with scipy.signal.cwt Parameters: points: int Number of points in `vector`. width: scalar Width parameter of wavelet. Equals (sample rate / fundamental frequenc...	[ "def", "cwtmorlet", "(", "points", ",", "width", ")", ":", "omega", "=", "5.0", "s", "=", "points", "/", "(", "2.0", "", "omega", "", "width", ")", "return", "wavelets", ".", "morlet", "(", "points", ",", "omega", ",", "s", ",", "complete", "=", ...	42.5	13
def main(): '''main routine''' # process arguments if len(sys.argv) < 3: usage() rgname = sys.argv[1] vmss_name = sys.argv[2] # Load Azure app defaults try: with open('azurermconfig.json') as config_file: config_data = json.load(config_file) except FileNotF...	[ "def", "main", "(", ")", ":", "# process arguments", "if", "len", "(", "sys", ".", "argv", ")", "<", "3", ":", "usage", "(", ")", "rgname", "=", "sys", ".", "argv", "[", "1", "]", "vmss_name", "=", "sys", ".", "argv", "[", "2", "]", "# Load Azure...	36	23.625
def get_adjustments(self, zero_qtr_data, requested_qtr_data, last_per_qtr, dates, assets, columns, **kwargs): """ Creates an AdjustedArr...	[ "def", "get_adjustments", "(", "self", ",", "zero_qtr_data", ",", "requested_qtr_data", ",", "last_per_qtr", ",", "dates", ",", "assets", ",", "columns", ",", "", "", "kwargs", ")", ":", "zero_qtr_data", ".", "sort_index", "(", "inplace", "=", "True", ")",...	38.666667	18.7
def _get_config_file_in_folder(cls, path): """Look for a configuration file in `path`. If exists return its full path, otherwise None. """ if os.path.isfile(path): path = os.path.dirname(path) for fn in cls.PROJECT_CONFIG_FILES: config = RawConfigParser...	[ "def", "_get_config_file_in_folder", "(", "cls", ",", "path", ")", ":", "if", "os", ".", "path", ".", "isfile", "(", "path", ")", ":", "path", "=", "os", ".", "path", ".", "dirname", "(", "path", ")", "for", "fn", "in", "cls", ".", "PROJECT_CONFIG_FI...	33	14
def _parse_settings_bond_1(opts, iface, bond_def): ''' Filters given options and outputs valid settings for bond1. If an option has a value that is not expected, this function will log what the Interface, Setting and what it was expecting. ''' bond = {'mode': '1'} for binding in ['miim...	[ "def", "_parse_settings_bond_1", "(", "opts", ",", "iface", ",", "bond_def", ")", ":", "bond", "=", "{", "'mode'", ":", "'1'", "}", "for", "binding", "in", "[", "'miimon'", ",", "'downdelay'", ",", "'updelay'", "]", ":", "if", "binding", "in", "opts", ...	34.054054	20.972973
def create_prj(self, atypes=None, deps=None): """Create and return a new project :param atypes: add the given atypes to the project :type atypes: list \| None :param deps: add the given departmetns to the project :type deps: list \| None :returns: The created project or No...	[ "def", "create_prj", "(", "self", ",", "atypes", "=", "None", ",", "deps", "=", "None", ")", ":", "dialog", "=", "ProjectCreatorDialog", "(", "parent", "=", "self", ")", "dialog", ".", "exec_", "(", ")", "prj", "=", "dialog", ".", "project", "if", "p...	34.346154	13.923077
def comparator(self, x, y): ''' simple comparator method ''' indX=0 indY=0 for i in range(len(self.stable_names)): if self.stable_names[i] == x[0].split('-')[0]: indX=i if self.stable_names[i] == y[0].split('-')[0]: ...	[ "def", "comparator", "(", "self", ",", "x", ",", "y", ")", ":", "indX", "=", "0", "indY", "=", "0", "for", "i", "in", "range", "(", "len", "(", "self", ".", "stable_names", ")", ")", ":", "if", "self", ".", "stable_names", "[", "i", "]", "==", ...	22.05	22.25
def detach(self): """ Detach from parent. @return: This element removed from its parent's child list and I{parent}=I{None} @rtype: L{Element} """ if self.parent is not None: if self in self.parent.children: self.parent.children.remo...	[ "def", "detach", "(", "self", ")", ":", "if", "self", ".", "parent", "is", "not", "None", ":", "if", "self", "in", "self", ".", "parent", ".", "children", ":", "self", ".", "parent", ".", "children", ".", "remove", "(", "self", ")", "self", ".", ...	30.666667	9.833333
def play(state): """ Play sound for a given state. :param state: a State value. """ filename = None if state == SoundService.State.welcome: filename = "pad_glow_welcome1.wav" elif state == SoundService.State.goodbye: filename = "pad_glow_power_off...	[ "def", "play", "(", "state", ")", ":", "filename", "=", "None", "if", "state", "==", "SoundService", ".", "State", ".", "welcome", ":", "filename", "=", "\"pad_glow_welcome1.wav\"", "elif", "state", "==", "SoundService", ".", "State", ".", "goodbye", ":", ...	38.157895	13.631579
def prepare_adiabatic_limit(slh, k=None): """Prepare the adiabatic elimination on an SLH object Args: slh: The SLH object to take the limit for k: The scaling parameter $k \rightarrow \infty$. The default is a positive symbol 'k' Returns: tuple: The objects ``Y, A, B, F...	[ "def", "prepare_adiabatic_limit", "(", "slh", ",", "k", "=", "None", ")", ":", "if", "k", "is", "None", ":", "k", "=", "symbols", "(", "'k'", ",", "positive", "=", "True", ")", "Ld", "=", "slh", ".", "L", ".", "dag", "(", ")", "LdL", "=", "(", ...	29.818182	16.363636
def save(self, must_create=False): """ Saves the current session data to the database. If 'must_create' is True, a database error will be raised if the saving operation doesn't create a new entry (as opposed to possibly updating an existing entry). :param must_create: ...	[ "def", "save", "(", "self", ",", "must_create", "=", "False", ")", ":", "if", "self", ".", "session_key", "is", "None", ":", "return", "self", ".", "create", "(", ")", "data", "=", "self", ".", "_get_session", "(", "no_load", "=", "must_create", ")", ...	36.285714	17.285714
def create_combination(list_of_sentences): """Generates all possible pair combinations for the input list of sentences. For example: input = ["paraphrase1", "paraphrase2", "paraphrase3"] output = [("paraphrase1", "paraphrase2"), ("paraphrase1", "paraphrase3"), ("paraphrase2", "paraphr...	[ "def", "create_combination", "(", "list_of_sentences", ")", ":", "num_sentences", "=", "len", "(", "list_of_sentences", ")", "-", "1", "combinations", "=", "[", "]", "for", "i", ",", "_", "in", "enumerate", "(", "list_of_sentences", ")", ":", "if", "i", "=...	29.538462	16.576923
def register_service(self, short_name, long_name, allow_duplicate=True): """Register a new service with the service manager. Args: short_name (string): A unique short name for this service that functions as an id long_name (string): A user facing name for this se...	[ "def", "register_service", "(", "self", ",", "short_name", ",", "long_name", ",", "allow_duplicate", "=", "True", ")", ":", "self", ".", "_loop", ".", "run_coroutine", "(", "self", ".", "_client", ".", "register_service", "(", "short_name", ",", "long_name", ...	49	30.857143
def load_paired_notebook(notebook, fmt, nb_file, log): """Update the notebook with the inputs and outputs of the most recent paired files""" formats = notebook.metadata.get('jupytext', {}).get('formats') if not formats: raise ValueError("'{}' is not a paired notebook".format(nb_file)) max_mtim...	[ "def", "load_paired_notebook", "(", "notebook", ",", "fmt", ",", "nb_file", ",", "log", ")", ":", "formats", "=", "notebook", ".", "metadata", ".", "get", "(", "'jupytext'", ",", "{", "}", ")", ".", "get", "(", "'formats'", ")", "if", "not", "formats",...	46	21.594595
def _get_files(): """General script to download file from online sources. Each remote file should be specified in the list of dict REMOTE_FILES. Each entry in REMOTE_FILES contains: filename : the filename which is used by the test scripts cached : the filename which is stored in the cache directory...	[ "def", "_get_files", "(", ")", ":", "for", "remote", "in", "REMOTE_FILES", ":", "final_file", "=", "DATA_PATH", "/", "remote", "[", "'filename'", "]", "if", "not", "final_file", ".", "exists", "(", ")", ":", "temp_file", "=", "DOWNLOADS_PATH", "/", "remote...	40.37037	23.12963
def parse(name, kwargs): """ Parse a C/C++ file """ idx = clang.cindex.Index.create() assert os.path.exists(name) tu = idx.parse(name, kwargs) return _ensure_parse_valid(tu)	[ "def", "parse", "(", "name", ",", "", "", "kwargs", ")", ":", "idx", "=", "clang", ".", "cindex", ".", "Index", ".", "create", "(", ")", "assert", "os", ".", "path", ".", "exists", "(", "name", ")", "tu", "=", "idx", ".", "parse", "(", "name"...	27.857143	5.428571
def _generate_notebook_by_difficulty_body(notebook_object, dict_by_difficulty): """ Internal function that is used for generation of the page where notebooks are organized by difficulty level. ---------- Parameters ---------- notebook_object : notebook object Object of "notebook" cl...	[ "def", "_generate_notebook_by_difficulty_body", "(", "notebook_object", ",", "dict_by_difficulty", ")", ":", "difficulty_keys", "=", "list", "(", "dict_by_difficulty", ".", "keys", "(", ")", ")", "difficulty_keys", ".", "sort", "(", ")", "for", "difficulty", "in", ...	47.425	27.675
def log_request( self, request: str, trim_log_values: bool = False, **kwargs: Any ) -> None: """ Log a request. Args: request: The JSON-RPC request string. trim_log_values: Log an abbreviated version of the request. """ return log_(request, re...	[ "def", "log_request", "(", "self", ",", "request", ":", "str", ",", "trim_log_values", ":", "bool", "=", "False", ",", "", "", "kwargs", ":", "Any", ")", "->", "None", ":", "return", "log_", "(", "request", ",", "request_log", ",", "\"info\"", ",", ...	32.727273	22.545455
def update_path(self): """ Tries to update the $PATH automatically. """ if WINDOWS: return self.add_to_windows_path() # Updating any profile we can on UNIX systems export_string = self.get_export_string() addition = "\n{}\n".format(export_string) ...	[ "def", "update_path", "(", "self", ")", ":", "if", "WINDOWS", ":", "return", "self", ".", "add_to_windows_path", "(", ")", "# Updating any profile we can on UNIX systems", "export_string", "=", "self", ".", "get_export_string", "(", ")", "addition", "=", "\"\\n{}\\n...	27.923077	15.769231
def distinct_column_values_at_locus( self, column, feature, contig, position, end=None, strand=None): """ Gather all the distinct values for a property/column at some specified locus. Parameters ...	[ "def", "distinct_column_values_at_locus", "(", "self", ",", "column", ",", "feature", ",", "contig", ",", "position", ",", "end", "=", "None", ",", "strand", "=", "None", ")", ":", "return", "self", ".", "column_values_at_locus", "(", "column", ",", "feature...	26.636364	20.545455
def normpath(path): """ Normalize ``path``, collapsing redundant separators and up-level refs. """ scheme, netloc, path_ = parse(path) return unparse(scheme, netloc, os.path.normpath(path_))	[ "def", "normpath", "(", "path", ")", ":", "scheme", ",", "netloc", ",", "path_", "=", "parse", "(", "path", ")", "return", "unparse", "(", "scheme", ",", "netloc", ",", "os", ".", "path", ".", "normpath", "(", "path_", ")", ")" ]	34.166667	12.5
def cmd_changealt(self, args): '''change target altitude''' if len(args) < 1: print("usage: changealt <relaltitude>") return relalt = float(args[0]) self.master.mav.mission_item_send(self.settings.target_system, self.setti...	[ "def", "cmd_changealt", "(", "self", ",", "args", ")", ":", "if", "len", "(", "args", ")", "<", "1", ":", "print", "(", "\"usage: changealt <relaltitude>\"", ")", "return", "relalt", "=", "float", "(", "args", "[", "0", "]", ")", "self", ".", "master",...	48.928571	17.5
def read_fits_spec(filename, ext=1, wave_col='WAVELENGTH', flux_col='FLUX', wave_unit=u.AA, flux_unit=units.FLAM): """Read FITS spectrum. Wavelength and flux units are extracted from ``TUNIT1`` and ``TUNIT2`` keywords, respectively, from data table (not primary) header. If these keyw...	[ "def", "read_fits_spec", "(", "filename", ",", "ext", "=", "1", ",", "wave_col", "=", "'WAVELENGTH'", ",", "flux_col", "=", "'FLUX'", ",", "wave_unit", "=", "u", ".", "AA", ",", "flux_unit", "=", "units", ".", "FLAM", ")", ":", "fs", "=", "fits", "."...	34.913043	21.652174
def publish_topology_description_changed(self, previous_description, new_description, topology_id): """Publish a TopologyDescriptionChangedEvent to all topology listeners. :Parameters: - `previous_description`: The previous topology description. ...	[ "def", "publish_topology_description_changed", "(", "self", ",", "previous_description", ",", "new_description", ",", "topology_id", ")", ":", "event", "=", "TopologyDescriptionChangedEvent", "(", "previous_description", ",", "new_description", ",", "topology_id", ")", "f...	47.647059	20.705882
def _appendComponent(self, baseGlyph, transformation=None, identifier=None, **kwargs): """ baseGlyph will be a valid glyph name. The baseGlyph may or may not be in the layer. offset will be a valid offset (x, y). scale will be a valid scale (x, y). identifier will be a v...	[ "def", "_appendComponent", "(", "self", ",", "baseGlyph", ",", "transformation", "=", "None", ",", "identifier", "=", "None", ",", "", "", "kwargs", ")", ":", "pointPen", "=", "self", ".", "getPointPen", "(", ")", "pointPen", ".", "addComponent", "(", ...	38	17.75
def _labeled_uniform_sample(self, sample_size): """sample labeled entries uniformly""" labeled_entries = self.dataset.get_labeled_entries() samples = [labeled_entries[ self.random_state_.randint(0, len(labeled_entries)) ]for _ in range(sample_size)] return Dataset(*zi...	[ "def", "_labeled_uniform_sample", "(", "self", ",", "sample_size", ")", ":", "labeled_entries", "=", "self", ".", "dataset", ".", "get_labeled_entries", "(", ")", "samples", "=", "[", "labeled_entries", "[", "self", ".", "random_state_", ".", "randint", "(", "...	46.571429	8.571429
def envelope(component, kwargs): """ Create parameters for an envelope (usually will be attached to two stars solRad that they can share a common-envelope) Generally, this will be used as an input to the kind argument in :meth:`phoebe.frontend.bundle.Bundle.add_component` :parameter kw...	[ "def", "envelope", "(", "component", ",", "", "", "kwargs", ")", ":", "params", "=", "[", "]", "params", "+=", "[", "FloatParameter", "(", "qualifier", "=", "'abun'", ",", "value", "=", "kwargs", ".", "get", "(", "'abun'", ",", "0.", ")", ",", "d...	92.522727	77.295455
def swipe_by_percent(self, start_x, start_y, end_x, end_y, duration=1000): """ Swipe from one percent of the screen to another percent, for an optional duration. Normal swipe fails to scale for different screen resolutions, this can be avoided using percent. Args: - start...	[ "def", "swipe_by_percent", "(", "self", ",", "start_x", ",", "start_y", ",", "end_x", ",", "end_y", ",", "duration", "=", "1000", ")", ":", "width", "=", "self", ".", "get_window_width", "(", ")", "height", "=", "self", ".", "get_window_height", "(", ")"...	42.363636	20.727273
def _CreateUserIdentifier(identifier_type=None, value=None): """Creates a user identifier from the specified type and value. Args: identifier_type: a str specifying the type of user identifier. value: a str value of the identifier; to be hashed using SHA-256 if needed. Returns: A dict specifying a u...	[ "def", "_CreateUserIdentifier", "(", "identifier_type", "=", "None", ",", "value", "=", "None", ")", ":", "if", "identifier_type", "in", "_HASHED_IDENTIFIER_TYPES", ":", "# If the user identifier type is a hashed type, normalize and hash the", "# value.", "value", "=", "has...	31.363636	25.454545
def write(context): """Starts a new article""" config = context.obj title = click.prompt('Title') author = click.prompt('Author', default=config.get('DEFAULT_AUTHOR')) slug = slugify(title) creation_date = datetime.now() basename = '{:%Y-%m-%d}_{}.md'.format(creation_date, slug) meta ...	[ "def", "write", "(", "context", ")", ":", "config", "=", "context", ".", "obj", "title", "=", "click", ".", "prompt", "(", "'Title'", ")", "author", "=", "click", ".", "prompt", "(", "'Author'", ",", "default", "=", "config", ".", "get", "(", "'DEFAU...	30.030303	20.939394
def geo_contains(left, right): """ Check if the first geometry contains the second one Parameters ---------- left : geometry right : geometry Returns ------- contains : bool scalar """ op = ops.GeoContains(left, right) return op.to_expr()	[ "def", "geo_contains", "(", "left", ",", "right", ")", ":", "op", "=", "ops", ".", "GeoContains", "(", "left", ",", "right", ")", "return", "op", ".", "to_expr", "(", ")" ]	18.266667	19.333333
def process_request(self, request, credential=None): """ Process a KMIP request message. This routine is the main driver of the KmipEngine. It breaks apart and processes the request header, handles any message errors that may result, and then passes the set of request batch item...	[ "def", "process_request", "(", "self", ",", "request", ",", "credential", "=", "None", ")", ":", "self", ".", "_client_identity", "=", "[", "None", ",", "None", "]", "header", "=", "request", ".", "request_header", "# Process the protocol version", "self", "."...	36.352459	19.352459
def identify_protocol(method, value): # type: (str, Union[str, RequestType]) -> str """ Loop through protocols, import the protocol module and try to identify the id or request. """ for protocol_name in PROTOCOLS: protocol = importlib.import_module(f"federation.protocols.{protocol_name}.prot...	[ "def", "identify_protocol", "(", "method", ",", "value", ")", ":", "# type: (str, Union[str, RequestType]) -> str", "for", "protocol_name", "in", "PROTOCOLS", ":", "protocol", "=", "importlib", ".", "import_module", "(", "f\"federation.protocols.{protocol_name}.protocol\"", ...	41.636364	17.090909
def pack(self): """ Packs the field value into a byte string so it can be sent to the server. :param structure: The message structure class object :return: A byte string of the packed field's value """ value = self._get_calculated_value(self.value) packed...	[ "def", "pack", "(", "self", ")", ":", "value", "=", "self", ".", "_get_calculated_value", "(", "self", ".", "value", ")", "packed_value", "=", "self", ".", "_pack_value", "(", "value", ")", "size", "=", "self", ".", "_get_calculated_size", "(", "self", "...	39.823529	20.411765
def prune_urls(url_set, start_url, allowed_list, ignored_list): """Prunes URLs that should be ignored.""" result = set() for url in url_set: allowed = False for allow_url in allowed_list: if url.startswith(allow_url): allowed = True break ...	[ "def", "prune_urls", "(", "url_set", ",", "start_url", ",", "allowed_list", ",", "ignored_list", ")", ":", "result", "=", "set", "(", ")", "for", "url", "in", "url_set", ":", "allowed", "=", "False", "for", "allow_url", "in", "allowed_list", ":", "if", "...	23.333333	19.966667
def show_messages(self): """Show all messages.""" string = '' if self.static_message is not None: string += self.static_message.to_text() for message in self.dynamic_messages: string += message.to_text() print(string)	[ "def", "show_messages", "(", "self", ")", ":", "string", "=", "''", "if", "self", ".", "static_message", "is", "not", "None", ":", "string", "+=", "self", ".", "static_message", ".", "to_text", "(", ")", "for", "message", "in", "self", ".", "dynamic_mess...	27.4	15.6
def console_user(username=False): ''' Gets the UID or Username of the current console user. :return: The uid or username of the console user. :param bool username: Whether to return the username of the console user instead of the UID. Defaults to False :rtype: Interger of the UID, or a string...	[ "def", "console_user", "(", "username", "=", "False", ")", ":", "try", ":", "# returns the 'st_uid' stat from the /dev/console file.", "uid", "=", "os", ".", "stat", "(", "'/dev/console'", ")", "[", "4", "]", "except", "(", "OSError", ",", "IndexError", ")", "...	27.28125	24.71875
def _run_checks(self): '''basic sanity checks for the file name (and others if needed) before attempting parsing. ''' if self.recipe is not None: # Does the recipe provided exist? if not os.path.exists(self.recipe): bot.error("Cannot find %s, i...	[ "def", "_run_checks", "(", "self", ")", ":", "if", "self", ".", "recipe", "is", "not", "None", ":", "# Does the recipe provided exist?", "if", "not", "os", ".", "path", ".", "exists", "(", "self", ".", "recipe", ")", ":", "bot", ".", "error", "(", "\"C...	35.769231	19.923077
def get_labels(input_dir): """Get a list of labels from preprocessed output dir.""" data_dir = _get_latest_data_dir(input_dir) labels_file = os.path.join(data_dir, 'labels') with file_io.FileIO(labels_file, 'r') as f: labels = f.read().rstrip().split('\n') return labels	[ "def", "get_labels", "(", "input_dir", ")", ":", "data_dir", "=", "_get_latest_data_dir", "(", "input_dir", ")", "labels_file", "=", "os", ".", "path", ".", "join", "(", "data_dir", ",", "'labels'", ")", "with", "file_io", ".", "FileIO", "(", "labels_file", ...	39.714286	8.285714
def get_file_extension_type(filename): """ Return the group associated to the file :param filename: :return: str """ ext = get_file_extension(filename) if ext: for name, group in EXTENSIONS.items(): if ext in group: return name return "OTHER"	[ "def", "get_file_extension_type", "(", "filename", ")", ":", "ext", "=", "get_file_extension", "(", "filename", ")", "if", "ext", ":", "for", "name", ",", "group", "in", "EXTENSIONS", ".", "items", "(", ")", ":", "if", "ext", "in", "group", ":", "return"...	24.916667	11.083333
def cors(origins, methods=['HEAD', 'OPTIONS', 'GET', 'POST', 'PUT', 'PATCH', 'DELETE'], headers=['Accept', 'Accept-Language', 'Content-Language', 'Content-Type', 'X-Requested-With'], max_age=None): """ Adds CORS headers to the decorated view function. :param origins: Allowed origins...	[ "def", "cors", "(", "origins", ",", "methods", "=", "[", "'HEAD'", ",", "'OPTIONS'", ",", "'GET'", ",", "'POST'", ",", "'PUT'", ",", "'PATCH'", ",", "'DELETE'", "]", ",", "headers", "=", "[", "'Accept'", ",", "'Accept-Language'", ",", "'Content-Language'",...	34.686047	21.593023
def ntoreturn(self): """Extract ntoreturn counter if available (lazy).""" if not self._counters_calculated: self._counters_calculated = True self._extract_counters() return self._ntoreturn	[ "def", "ntoreturn", "(", "self", ")", ":", "if", "not", "self", ".", "_counters_calculated", ":", "self", ".", "_counters_calculated", "=", "True", "self", ".", "_extract_counters", "(", ")", "return", "self", ".", "_ntoreturn" ]	33	11.285714
def list_machine_group(self, project_name, offset=0, size=100): """ list machine group names in a project Unsuccessful opertaion will cause an LogException. :type project_name: string :param project_name: the Project name :type offset: int :param offset: the of...	[ "def", "list_machine_group", "(", "self", ",", "project_name", ",", "offset", "=", "0", ",", "size", "=", "100", ")", ":", "# need to use extended method to get more\r", "if", "int", "(", "size", ")", "==", "-", "1", "or", "int", "(", "size", ")", ">", "...	35.827586	21.275862
def set_meta_rdf(self, rdf, fmt='n3'): """Set the metadata for this Point in rdf fmt """ evt = self._client._request_point_meta_set(self._type, self.__lid, self.__pid, rdf, fmt=fmt) self._client._wait_and_except_if_failed(evt)	[ "def", "set_meta_rdf", "(", "self", ",", "rdf", ",", "fmt", "=", "'n3'", ")", ":", "evt", "=", "self", ".", "_client", ".", "_request_point_meta_set", "(", "self", ".", "_type", ",", "self", ".", "__lid", ",", "self", ".", "__pid", ",", "rdf", ",", ...	50.8	14.8
def saturation(self, value): """Volume of water to volume of voids""" value = clean_float(value) if value is None: return try: unit_moisture_weight = self.unit_moist_weight - self.unit_dry_weight unit_moisture_volume = unit_moisture_weight / self._pw ...	[ "def", "saturation", "(", "self", ",", "value", ")", ":", "value", "=", "clean_float", "(", "value", ")", "if", "value", "is", "None", ":", "return", "try", ":", "unit_moisture_weight", "=", "self", ".", "unit_moist_weight", "-", "self", ".", "unit_dry_wei...	44.090909	20.181818
def _find_conflicts_within_selection_set( context, # type: ValidationContext cached_fields_and_fragment_names, # type: Dict[SelectionSet, Tuple[Dict[str, List[Tuple[Union[GraphQLInterfaceType, GraphQLObjectType, None], Field, GraphQLField]]], List[str]]] compared_fragments, # type: PairSet parent_typ...	[ "def", "_find_conflicts_within_selection_set", "(", "context", ",", "# type: ValidationContext", "cached_fields_and_fragment_names", ",", "# type: Dict[SelectionSet, Tuple[Dict[str, List[Tuple[Union[GraphQLInterfaceType, GraphQLObjectType, None], Field, GraphQLField]]], List[str]]]", "compared_fra...	40.625	23.160714
def _key(self, block, name): """ Resolves `name` to a key, in the following form: KeyValueStore.Key( scope=field.scope, user_id=student_id, block_scope_id=block_id, field_name=name, block_family=block.entry_point, ) """...	[ "def", "_key", "(", "self", ",", "block", ",", "name", ")", ":", "field", "=", "self", ".", "_getfield", "(", "block", ",", "name", ")", "if", "field", ".", "scope", "in", "(", "Scope", ".", "children", ",", "Scope", ".", "parent", ")", ":", "blo...	31.390244	13.97561
def add_waveform(self, waveform): """ Add a waveform to the plot. :param waveform: the waveform to be added :type waveform: :class:`~aeneas.plotter.PlotWaveform` :raises: TypeError: if ``waveform`` is not an instance of :class:`~aeneas.plotter.PlotWaveform` """ ...	[ "def", "add_waveform", "(", "self", ",", "waveform", ")", ":", "if", "not", "isinstance", "(", "waveform", ",", "PlotWaveform", ")", ":", "self", ".", "log_exc", "(", "u\"waveform must be an instance of PlotWaveform\"", ",", "None", ",", "True", ",", "TypeError"...	43.083333	18.75
def make_sgf( move_history, result_string, ruleset="Chinese", komi=7.5, white_name=PROGRAM_IDENTIFIER, black_name=PROGRAM_IDENTIFIER, comments=[] ): """Turn a game into SGF. Doesn't handle handicap games or positions with incomplete history. Args: move_history: iterable...	[ "def", "make_sgf", "(", "move_history", ",", "result_string", ",", "ruleset", "=", "\"Chinese\"", ",", "komi", "=", "7.5", ",", "white_name", "=", "PROGRAM_IDENTIFIER", ",", "black_name", "=", "PROGRAM_IDENTIFIER", ",", "comments", "=", "[", "]", ")", ":", "...	28.782609	20.043478
def update(self, rid, data, raise_on_error=True): """Write updated cache data to the DataStore. Args: rid (str): The record identifier. data (dict): The record data. raise_on_error (bool): If True and not r.ok this method will raise a RunTimeError. Returns: ...	[ "def", "update", "(", "self", ",", "rid", ",", "data", ",", "raise_on_error", "=", "True", ")", ":", "cache_data", "=", "{", "'cache-date'", ":", "self", ".", "_dt_to_epoch", "(", "datetime", ".", "now", "(", ")", ")", ",", "'cache-data'", ":", "data",...	39.692308	21.076923

def to_jd(year, month, day): '''Convert a Positivist date to Julian day count.''' legal_date(year, month, day) gyear = year + YEAR_EPOCH - 1 return ( gregorian.EPOCH - 1 + (365 * (gyear - 1)) + floor((gyear - 1) / 4) + (-floor((gyear - 1) / 100)) + floor((gyear - 1) / 400) + (mo...

[ "def", "to_jd", "(", "year", ",", "month", ",", "day", ")", ":", "legal_date", "(", "year", ",", "month", ",", "day", ")", "gyear", "=", "year", "+", "YEAR_EPOCH", "-", "1", "return", "(", "gregorian", ".", "EPOCH", "-", "1", "+", "(", "365", "*"...

33.6

19.6

def discover_json(self): """Discovers the JSON format and registers it if available. To speed up JSON parsing and composing, install `simplejson`:: pip install simplejson The standard library module `json` will be used by default. """ try: import simple...

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30.357143

19.5

def install_os_snaps(snaps, refresh=False): """Install OpenStack snaps from channel and with mode @param snaps: Dictionary of snaps with channels and modes of the form: {'snap_name': {'channel': 'snap_channel', 'mode': 'snap_mode'}} Where channel is a snapstore channel an...

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35.962963

18.62963

def add_status_line(self, label): """Add a status bar line to the table. This function returns the status bar and it can be modified from this return value. """ status_line = StatusBar(label, self._sep_start, self._sep_end, ...

[ "def", "add_status_line", "(", "self", ",", "label", ")", ":", "status_line", "=", "StatusBar", "(", "label", ",", "self", ".", "_sep_start", ",", "self", ".", "_sep_end", ",", "self", ".", "_fill_char", ")", "self", ".", "_lines", ".", "append", "(", ...

36.545455

11.909091

def do_region(self, x, y, w, h): """Apply region selection.""" if (x is None): self.logger.debug("region: full (nop)") else: self.logger.debug("region: (%d,%d,%d,%d)" % (x, y, w, h)) self.image = self.image.crop((x, y, x + w, y + h)) self.width = w...

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37.777778

15.666667

def _wait_new_conf(self): """Ask the daemon to drop its configuration and wait for a new one This overrides the default method from GenericInterface :return: None """ with self.app.conf_lock: logger.warning("My master Arbiter wants me to wait for a new configuration...

[ "def", "_wait_new_conf", "(", "self", ")", ":", "with", "self", ".", "app", ".", "conf_lock", ":", "logger", ".", "warning", "(", "\"My master Arbiter wants me to wait for a new configuration.\"", ")", "self", ".", "app", ".", "cur_conf", "=", "{", "}" ]

34.9

20

def handle_purge(environ, start_response): """ Handle a PURGE request. """ from utils import is_valid_security, get_cached_files from settings import DEBUG server = environ['SERVER_NAME'] try: request_uri = get_path(environ) path_and_query = request_uri.lstrip("/") qu...

[ "def", "handle_purge", "(", "environ", ",", "start_response", ")", ":", "from", "utils", "import", "is_valid_security", ",", "get_cached_files", "from", "settings", "import", "DEBUG", "server", "=", "environ", "[", "'SERVER_NAME'", "]", "try", ":", "request_uri", ...

36.833333

13

def check_manifest (): """Snatched from roundup.sf.net. Check that the files listed in the MANIFEST are present when the source is unpacked.""" try: f = open('MANIFEST') except Exception: print('\n*** SOURCE WARNING: The MANIFEST file is missing!') return try: man...

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34.368421

21.210526

def send_batches(self, batch_list): """Sends a list of batches to the validator. Args: batch_list (:obj:`BatchList`): the list of batches Returns: dict: the json result data, as a dict """ if isinstance(batch_list, BaseMessage): batch_list = ...

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29.923077

18.307692

def knock_out(self): """Knockout gene by marking it as non-functional and setting all associated reactions bounds to zero. The change is reverted upon exit if executed within the model as context. """ self.functional = False for reaction in self.reactions: ...

[ "def", "knock_out", "(", "self", ")", ":", "self", ".", "functional", "=", "False", "for", "reaction", "in", "self", ".", "reactions", ":", "if", "not", "reaction", ".", "functional", ":", "reaction", ".", "bounds", "=", "(", "0", ",", "0", ")" ]

34.909091

11.909091

def concat_same_type(self, to_concat, placement=None): """ Concatenate list of single blocks of the same type. """ values = self._holder._concat_same_type( [blk.values for blk in to_concat]) placement = placement or slice(0, len(values), 1) return self.make_bl...

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45.888889

12.333333

def bounding_box_from_annotation(source=None, padding=None, **kwargs): """bounding_box_from_annotation(source, padding, **kwargs) -> bounding_box Creates a bounding box from the given parameters, which are, in general, annotations read using :py:func:`bob.ip.facedetect.read_annotation_file`. Different kinds of a...

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45.673684

30.905263

def auto_thaw(vault_client, opt): """Will thaw into a temporary location""" icefile = opt.thaw_from if not os.path.exists(icefile): raise aomi.exceptions.IceFile("%s missing" % icefile) thaw(vault_client, icefile, opt) return opt

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31.375

14.5

def transition(value, maximum, start, end): """ Transition between two values. :param value: Current iteration. :param maximum: Maximum number of iterations. :param start: Start value. :param end: End value. :returns: Transitional value. """ return round(start + (end - start) * value / ...

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32.2

10.7

def _write_config(self): '''Write the parameters to a file for PhantomJS to read.''' param_dict = { 'url': self._params.url, 'snapshot_paths': self._params.snapshot_paths, 'wait_time': self._params.wait_time, 'num_scrolls': self._params.num_scrolls, ...

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41.16129

18.967742

def _substitute(self, str): """ Substitute words in the string, according to the specified reflections, e.g. "I'm" -> "you are" :type str: str :param str: The string to be mapped :rtype: str """ if not self.attr.get("substitute",True):return str r...

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33.846154

15.076923

def infer(self, data, initial_proposal=None, full_output=False,**kwargs): """ Infer the model parameters, given the data. auto_convergence=True, walkers=100, burn=2000, sample=2000, minimum_sample=2000, convergence_check_frequency=1000, a=2.0, threads=1, """ # ...

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43.625786

22.745283

def list_active_vms(cwd=None): ''' Return a list of machine names for active virtual machine on the host, which are defined in the Vagrantfile at the indicated path. CLI Example: .. code-block:: bash salt '*' vagrant.list_active_vms cwd=/projects/project_1 ''' vms = [] cmd = ...

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29.666667

21.47619

def redraw_current_line(self): """ Redraw the highlighted line """ if self.no_streams: return row = self.pads[self.current_pad].getyx()[0] s = self.filtered_streams[row] pad = self.pads['streams'] pad.move(row, 0) pad.clrtoeol() pad.addstr(row,...

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34.846154

12.153846

def cmd_wp_movemulti(self, args): '''handle wp move of multiple waypoints''' if len(args) < 3: print("usage: wp movemulti WPNUM WPSTART WPEND <rotation>") return idx = int(args[0]) if idx < 1 or idx > self.wploader.count(): print("Invalid wp number %u"...

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41.930556

19.791667

def skew_y(self, y): """Skew element along the y-axis by the given angle. Parameters ---------- y : float y-axis skew angle in degrees """ self.root.set("transform", "%s skewY(%f)" % (self.root.get("transform") or '', y)) return ...

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28.545455

16.272727

def enable(step: 'projects.ProjectStep'): """ Create a print equivalent function that also writes the output to the project page. The write_through is enabled so that the TextIOWrapper immediately writes all of its input data directly to the underlying BytesIO buffer. This is needed so that we can s...

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36.28

19.96

def classify_segmented_recording(recording, result_format=None): """Use this function if you are sure you have a single symbol. Parameters ---------- recording : string The recording in JSON format Returns ------- list of dictionaries Each dictionary contains the keys 'symb...

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32.722222

19

def have_graph(self, graph): """Return whether I have a graph by this name.""" graph = self.pack(graph) return bool(self.sql('graphs_named', graph).fetchone()[0])

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45.75

11.5

def _build_model_factories(store): """Generate factories to construct objects from schemata""" result = {} for schemaname in store: schema = None try: schema = store[schemaname]['schema'] except KeyError: schemata_log("No schema found for ", schemaname, lv...

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27.95

27.5

def remove_timex3s(self, list_timex_ids): """ Removes a list of terms from the layer @type list_timex_ids: list (of strings) @param list_timex_ids: list of timex identifier to be removed """ nodes_to_remove = set() for timex in self: if timex.get_id() ...

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40

12.588235

def createsnippet(self, project_id, title, file_name, code, visibility_level=0): """ Creates an snippet :param project_id: project id to create the snippet under :param title: title of the snippet :param file_name: filename for the snippet :param code: content of the sni...

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40.5

22.416667

def windowed_run_count(da, window, dim='time'): """Return the number of consecutive true values in array for runs at least as long as given duration. Parameters ---------- da: N-dimensional Xarray data array (boolean) Input data array window : int Minimum run le...

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33

19.952381

def _get_encoder_method(stream_type): """A function to get the python type to device cloud type converter function. :param stream_type: The streams data type :return: A function that when called with the python object will return the serializable type for sending to the cloud. If there is no function f...

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49.166667

24.666667

def start(track_file, twitter_api_key, twitter_api_secret, twitter_access_token, twitter_access_token_secret, poll_interval=15, unfiltered=False, languages=None, debug=False, outfile=None): """Start the stream.""" listener...

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def fromurl(url): """ Parse patch from an URL, return False if an error occured. Note that this also can throw urlopen() exceptions. """ ps = PatchSet( urllib_request.urlopen(url) ) if ps.errors == 0: return ps return False

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def shift_christmas_boxing_days(self, year): """ When Christmas and/or Boxing Day falls on a weekend, it is rolled forward to the next weekday. """ christmas = date(year, 12, 25) boxing_day = date(year, 12, 26) boxing_day_label = "{} Shift".format(self.boxing_day_labe...

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def reply_to(self) -> Optional[Sequence[AddressHeader]]: """The ``Reply-To`` header.""" try: return cast(Sequence[AddressHeader], self[b'reply-to']) except KeyError: return None

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def logged_in(): """ Method called by Strava (redirect) that includes parameters. - state - code - error """ error = request.args.get('error') state = request.args.get('state') if error: return render_template('login_error.html', error=error) else: code = request....

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def factorize(self, show_progress=False, compute_w=True, compute_h=True, compute_err=True, robust_cluster=3, niter=1, robust_nselect=-1): """ Factorize s.t. WH = data Parameters ---------- show_progress : bool print some extra informatio...

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def reduce_number(num): """Reduces the string representation of a number. If the number is of the format n.00..., returns n. If the decimal portion of the number has a repeating decimal, followed by up to two trailing numbers, such as: 0.3333333 or 0.343434346 It will return just one instance of th...

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def cartesian_to_spherical_azimuthal(x, y): """ Calculates the azimuthal angle in spherical coordinates from Cartesian coordinates. The azimuthal angle is in [0,2*pi]. Parameters ---------- x : {numpy.array, float} X-coordinate. y : {numpy.array, float} Y-coordinate. Return...

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def simplify_graph(graph): """ strips out everything but connectivity Args: graph (nx.Graph): Returns: nx.Graph: new_graph CommandLine: python3 -m utool.util_graph simplify_graph --show python2 -m utool.util_graph simplify_graph --show python2 -c "import n...

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def get_collection(self, qs, view_kwargs): """Retrieve a collection of objects through sqlalchemy :param QueryStringManager qs: a querystring manager to retrieve information from url :param dict view_kwargs: kwargs from the resource view :return tuple: the number of object and the list ...

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def expose(rule, **options): """Decorator to add an url rule to a function """ def decorator(f): if not hasattr(f, "urls"): f.urls = [] if isinstance(rule, (list, tuple)): f.urls.extend(rule) else: f.urls.append((rule, options)) return f ...

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def _initialize_attributes(model_class, name, bases, attrs): """Initialize the attributes of the model.""" model_class._attributes = {} for k, v in attrs.iteritems(): if isinstance(v, Attribute): model_class._attributes[k] = v v.name = v.name or k

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def active(self): """ Return the currently active :class:`~opentracing.Scope` which can be used to access the currently active :attr:`Scope.span`. :return: the :class:`~opentracing.Scope` that is active, or ``None`` if not available. """ context = se...

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def _process_pong(self): """ Process PONG sent by server. """ if len(self._pongs) > 0: future = self._pongs.pop(0) future.set_result(True) self._pongs_received += 1 self._pings_outstanding -= 1

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def maybe_put_task(self): """Enqueue the next task, if there are any waiting.""" try: task = next(self.tasks) except StopIteration: pass else: log.debug('Putting %s on queue', task) self.task_queue.put(task)

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def buildMaskImage(rootname, bitvalue, output, extname='DQ', extver=1): """ Builds mask image from rootname's DQ array If there is no valid 'DQ' array in image, then return an empty string. """ # If no bitvalue is set or rootname given, assume no mask is desired # However, this name wou...

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def comments(self): # pylint: disable=E0202 """Return forest of comments, with top-level comments as tree roots. May contain instances of MoreComment objects. To easily replace these objects with Comment objects, use the replace_more_comments method then fetch this attribute. Use comme...

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def p_return_expr(p): """ statement : RETURN expr """ if not FUNCTION_LEVEL: # At less one level syntax_error(p.lineno(1), 'Syntax Error: Returning value out of FUNCTION') p[0] = None return if FUNCTION_LEVEL[-1].kind is None: # This function was not correctly declared. ...

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def delete(filething): """ delete(filething) Arguments: filething (filething) Raises: mutagen.MutagenError Remove tags from a file. """ t = OggTheora(filething) filething.fileobj.seek(0) t.delete(filething)

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def pdf(self, f, y, Y_metadata=None): """ Evaluates the link function link(f) then computes the likelihood (pdf) using it .. math: p(y|\\lambda(f)) :param f: latent variables f :type f: Nx1 array :param y: data :type y: Nx1 array :param Y_met...

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def list_tokens(opts): ''' List all tokens in the store. :param opts: Salt master config options :returns: List of dicts (tokens) ''' ret = [] for (dirpath, dirnames, filenames) in salt.utils.path.os_walk(opts['token_dir']): for token in filenames: ret.append(token) ...

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def cwtmorlet(points, width): """complex morlet wavelet function compatible with scipy.signal.cwt Parameters: points: int Number of points in `vector`. width: scalar Width parameter of wavelet. Equals (sample rate / fundamental frequenc...

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def main(): '''main routine''' # process arguments if len(sys.argv) < 3: usage() rgname = sys.argv[1] vmss_name = sys.argv[2] # Load Azure app defaults try: with open('azurermconfig.json') as config_file: config_data = json.load(config_file) except FileNotF...

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def get_adjustments(self, zero_qtr_data, requested_qtr_data, last_per_qtr, dates, assets, columns, **kwargs): """ Creates an AdjustedArr...

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def _get_config_file_in_folder(cls, path): """Look for a configuration file in `path`. If exists return its full path, otherwise None. """ if os.path.isfile(path): path = os.path.dirname(path) for fn in cls.PROJECT_CONFIG_FILES: config = RawConfigParser...

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def _parse_settings_bond_1(opts, iface, bond_def): ''' Filters given options and outputs valid settings for bond1. If an option has a value that is not expected, this function will log what the Interface, Setting and what it was expecting. ''' bond = {'mode': '1'} for binding in ['miim...

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def create_prj(self, atypes=None, deps=None): """Create and return a new project :param atypes: add the given atypes to the project :type atypes: list | None :param deps: add the given departmetns to the project :type deps: list | None :returns: The created project or No...

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def comparator(self, x, y): ''' simple comparator method ''' indX=0 indY=0 for i in range(len(self.stable_names)): if self.stable_names[i] == x[0].split('-')[0]: indX=i if self.stable_names[i] == y[0].split('-')[0]: ...

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def detach(self): """ Detach from parent. @return: This element removed from its parent's child list and I{parent}=I{None} @rtype: L{Element} """ if self.parent is not None: if self in self.parent.children: self.parent.children.remo...

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def play(state): """ Play sound for a given state. :param state: a State value. """ filename = None if state == SoundService.State.welcome: filename = "pad_glow_welcome1.wav" elif state == SoundService.State.goodbye: filename = "pad_glow_power_off...

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def prepare_adiabatic_limit(slh, k=None): """Prepare the adiabatic elimination on an SLH object Args: slh: The SLH object to take the limit for k: The scaling parameter $k \rightarrow \infty$. The default is a positive symbol 'k' Returns: tuple: The objects ``Y, A, B, F...

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def save(self, must_create=False): """ Saves the current session data to the database. If 'must_create' is True, a database error will be raised if the saving operation doesn't create a *new* entry (as opposed to possibly updating an existing entry). :param must_create: ...

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def create_combination(list_of_sentences): """Generates all possible pair combinations for the input list of sentences. For example: input = ["paraphrase1", "paraphrase2", "paraphrase3"] output = [("paraphrase1", "paraphrase2"), ("paraphrase1", "paraphrase3"), ("paraphrase2", "paraphr...

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def register_service(self, short_name, long_name, allow_duplicate=True): """Register a new service with the service manager. Args: short_name (string): A unique short name for this service that functions as an id long_name (string): A user facing name for this se...

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def load_paired_notebook(notebook, fmt, nb_file, log): """Update the notebook with the inputs and outputs of the most recent paired files""" formats = notebook.metadata.get('jupytext', {}).get('formats') if not formats: raise ValueError("'{}' is not a paired notebook".format(nb_file)) max_mtim...

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def _get_files(): """General script to download file from online sources. Each remote file should be specified in the list of dict REMOTE_FILES. Each entry in REMOTE_FILES contains: filename : the filename which is used by the test scripts cached : the filename which is stored in the cache directory...

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def parse(name, **kwargs): """ Parse a C/C++ file """ idx = clang.cindex.Index.create() assert os.path.exists(name) tu = idx.parse(name, **kwargs) return _ensure_parse_valid(tu)

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def _generate_notebook_by_difficulty_body(notebook_object, dict_by_difficulty): """ Internal function that is used for generation of the page where notebooks are organized by difficulty level. ---------- Parameters ---------- notebook_object : notebook object Object of "notebook" cl...

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def log_request( self, request: str, trim_log_values: bool = False, **kwargs: Any ) -> None: """ Log a request. Args: request: The JSON-RPC request string. trim_log_values: Log an abbreviated version of the request. """ return log_(request, re...

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def update_path(self): """ Tries to update the $PATH automatically. """ if WINDOWS: return self.add_to_windows_path() # Updating any profile we can on UNIX systems export_string = self.get_export_string() addition = "\n{}\n".format(export_string) ...

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def distinct_column_values_at_locus( self, column, feature, contig, position, end=None, strand=None): """ Gather all the distinct values for a property/column at some specified locus. Parameters ...

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def normpath(path): """ Normalize ``path``, collapsing redundant separators and up-level refs. """ scheme, netloc, path_ = parse(path) return unparse(scheme, netloc, os.path.normpath(path_))

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def cmd_changealt(self, args): '''change target altitude''' if len(args) < 1: print("usage: changealt <relaltitude>") return relalt = float(args[0]) self.master.mav.mission_item_send(self.settings.target_system, self.setti...

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def read_fits_spec(filename, ext=1, wave_col='WAVELENGTH', flux_col='FLUX', wave_unit=u.AA, flux_unit=units.FLAM): """Read FITS spectrum. Wavelength and flux units are extracted from ``TUNIT1`` and ``TUNIT2`` keywords, respectively, from data table (not primary) header. If these keyw...

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def publish_topology_description_changed(self, previous_description, new_description, topology_id): """Publish a TopologyDescriptionChangedEvent to all topology listeners. :Parameters: - `previous_description`: The previous topology description. ...

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def _appendComponent(self, baseGlyph, transformation=None, identifier=None, **kwargs): """ baseGlyph will be a valid glyph name. The baseGlyph may or may not be in the layer. offset will be a valid offset (x, y). scale will be a valid scale (x, y). identifier will be a v...

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def _labeled_uniform_sample(self, sample_size): """sample labeled entries uniformly""" labeled_entries = self.dataset.get_labeled_entries() samples = [labeled_entries[ self.random_state_.randint(0, len(labeled_entries)) ]for _ in range(sample_size)] return Dataset(*zi...

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def envelope(component, **kwargs): """ Create parameters for an envelope (usually will be attached to two stars solRad that they can share a common-envelope) Generally, this will be used as an input to the kind argument in :meth:`phoebe.frontend.bundle.Bundle.add_component` :parameter **kw...

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def swipe_by_percent(self, start_x, start_y, end_x, end_y, duration=1000): """ Swipe from one percent of the screen to another percent, for an optional duration. Normal swipe fails to scale for different screen resolutions, this can be avoided using percent. Args: - start...

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def _CreateUserIdentifier(identifier_type=None, value=None): """Creates a user identifier from the specified type and value. Args: identifier_type: a str specifying the type of user identifier. value: a str value of the identifier; to be hashed using SHA-256 if needed. Returns: A dict specifying a u...

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def write(context): """Starts a new article""" config = context.obj title = click.prompt('Title') author = click.prompt('Author', default=config.get('DEFAULT_AUTHOR')) slug = slugify(title) creation_date = datetime.now() basename = '{:%Y-%m-%d}_{}.md'.format(creation_date, slug) meta ...

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def geo_contains(left, right): """ Check if the first geometry contains the second one Parameters ---------- left : geometry right : geometry Returns ------- contains : bool scalar """ op = ops.GeoContains(left, right) return op.to_expr()

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def process_request(self, request, credential=None): """ Process a KMIP request message. This routine is the main driver of the KmipEngine. It breaks apart and processes the request header, handles any message errors that may result, and then passes the set of request batch item...

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def identify_protocol(method, value): # type: (str, Union[str, RequestType]) -> str """ Loop through protocols, import the protocol module and try to identify the id or request. """ for protocol_name in PROTOCOLS: protocol = importlib.import_module(f"federation.protocols.{protocol_name}.prot...

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def pack(self): """ Packs the field value into a byte string so it can be sent to the server. :param structure: The message structure class object :return: A byte string of the packed field's value """ value = self._get_calculated_value(self.value) packed...

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def prune_urls(url_set, start_url, allowed_list, ignored_list): """Prunes URLs that should be ignored.""" result = set() for url in url_set: allowed = False for allow_url in allowed_list: if url.startswith(allow_url): allowed = True break ...

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def show_messages(self): """Show all messages.""" string = '' if self.static_message is not None: string += self.static_message.to_text() for message in self.dynamic_messages: string += message.to_text() print(string)

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def console_user(username=False): ''' Gets the UID or Username of the current console user. :return: The uid or username of the console user. :param bool username: Whether to return the username of the console user instead of the UID. Defaults to False :rtype: Interger of the UID, or a string...

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def _run_checks(self): '''basic sanity checks for the file name (and others if needed) before attempting parsing. ''' if self.recipe is not None: # Does the recipe provided exist? if not os.path.exists(self.recipe): bot.error("Cannot find %s, i...

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def get_labels(input_dir): """Get a list of labels from preprocessed output dir.""" data_dir = _get_latest_data_dir(input_dir) labels_file = os.path.join(data_dir, 'labels') with file_io.FileIO(labels_file, 'r') as f: labels = f.read().rstrip().split('\n') return labels

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39.714286

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def get_file_extension_type(filename): """ Return the group associated to the file :param filename: :return: str """ ext = get_file_extension(filename) if ext: for name, group in EXTENSIONS.items(): if ext in group: return name return "OTHER"

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24.916667

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def cors(origins, methods=['HEAD', 'OPTIONS', 'GET', 'POST', 'PUT', 'PATCH', 'DELETE'], headers=['Accept', 'Accept-Language', 'Content-Language', 'Content-Type', 'X-Requested-With'], max_age=None): """ Adds CORS headers to the decorated view function. :param origins: Allowed origins...

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34.686047

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def ntoreturn(self): """Extract ntoreturn counter if available (lazy).""" if not self._counters_calculated: self._counters_calculated = True self._extract_counters() return self._ntoreturn

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33

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def list_machine_group(self, project_name, offset=0, size=100): """ list machine group names in a project Unsuccessful opertaion will cause an LogException. :type project_name: string :param project_name: the Project name :type offset: int :param offset: the of...

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35.827586

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def set_meta_rdf(self, rdf, fmt='n3'): """Set the metadata for this Point in rdf fmt """ evt = self._client._request_point_meta_set(self._type, self.__lid, self.__pid, rdf, fmt=fmt) self._client._wait_and_except_if_failed(evt)

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50.8

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def saturation(self, value): """Volume of water to volume of voids""" value = clean_float(value) if value is None: return try: unit_moisture_weight = self.unit_moist_weight - self.unit_dry_weight unit_moisture_volume = unit_moisture_weight / self._pw ...

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44.090909

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def _find_conflicts_within_selection_set( context, # type: ValidationContext cached_fields_and_fragment_names, # type: Dict[SelectionSet, Tuple[Dict[str, List[Tuple[Union[GraphQLInterfaceType, GraphQLObjectType, None], Field, GraphQLField]]], List[str]]] compared_fragments, # type: PairSet parent_typ...

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40.625

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def _key(self, block, name): """ Resolves `name` to a key, in the following form: KeyValueStore.Key( scope=field.scope, user_id=student_id, block_scope_id=block_id, field_name=name, block_family=block.entry_point, ) """...

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31.390244

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def add_waveform(self, waveform): """ Add a waveform to the plot. :param waveform: the waveform to be added :type waveform: :class:`~aeneas.plotter.PlotWaveform` :raises: TypeError: if ``waveform`` is not an instance of :class:`~aeneas.plotter.PlotWaveform` """ ...

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43.083333

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def make_sgf( move_history, result_string, ruleset="Chinese", komi=7.5, white_name=PROGRAM_IDENTIFIER, black_name=PROGRAM_IDENTIFIER, comments=[] ): """Turn a game into SGF. Doesn't handle handicap games or positions with incomplete history. Args: move_history: iterable...

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28.782609

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def update(self, rid, data, raise_on_error=True): """Write updated cache data to the DataStore. Args: rid (str): The record identifier. data (dict): The record data. raise_on_error (bool): If True and not r.ok this method will raise a RunTimeError. Returns: ...

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39.692308

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