kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def entry_set(self, predicate=None): """ Returns a list clone of the mappings contained in this map. Warning: The list is NOT backed by the map, so changes to the map are NOT reflected in the list, and vice-versa. :param predicate: (Predicate), predicate for the map to filt...	[ "def", "entry_set", "(", "self", ",", "predicate", "=", "None", ")", ":", "if", "predicate", ":", "predicate_data", "=", "self", ".", "_to_data", "(", "predicate", ")", "return", "self", ".", "_encode_invoke", "(", "map_entries_with_predicate_codec", ",", "pre...	45	31
def _set_fcoe_fip_advertisement(self, v, load=False): """ Setter method for fcoe_fip_advertisement, mapped from YANG variable /fcoe/fcoe_fabric_map/fcoe_fip_advertisement (container) If this variable is read-only (config: false) in the source YANG file, then _set_fcoe_fip_advertisement is considered as ...	[ "def", "_set_fcoe_fip_advertisement", "(", "self", ",", "v", ",", "load", "=", "False", ")", ":", "if", "hasattr", "(", "v", ",", "\"_utype\"", ")", ":", "v", "=", "v", ".", "_utype", "(", "v", ")", "try", ":", "t", "=", "YANGDynClass", "(", "v", ...	79.56	40.12
def cast_problem(problem): """ Casts problem object with known interface as OptProblem. Parameters ---------- problem : Object """ # Optproblem if isinstance(problem,OptProblem): return problem # Other else: # Type Base if (not hasattr(...	[ "def", "cast_problem", "(", "problem", ")", ":", "# Optproblem", "if", "isinstance", "(", "problem", ",", "OptProblem", ")", ":", "return", "problem", "# Other", "else", ":", "# Type Base", "if", "(", "not", "hasattr", "(", "problem", ",", "'G'", ")", "or"...	24.740741	20.222222
def on_view_change_start(self): """ Notifies node about the fact that view changed to let it prepare for election """ self.view_changer.start_view_change_ts = self.utc_epoch() for replica in self.replicas.values(): replica.on_view_change_start() logge...	[ "def", "on_view_change_start", "(", "self", ")", ":", "self", ".", "view_changer", ".", "start_view_change_ts", "=", "self", ".", "utc_epoch", "(", ")", "for", "replica", "in", "self", ".", "replicas", ".", "values", "(", ")", ":", "replica", ".", "on_view...	43.419355	21.935484
def kudos(self): """ :class:`list` of :class:`stravalib.model.ActivityKudos` objects for this activity. """ if self._kudos is None: self.assert_bind_client() self._kudos = self.bind_client.get_activity_kudos(self.id) return self._kudos	[ "def", "kudos", "(", "self", ")", ":", "if", "self", ".", "_kudos", "is", "None", ":", "self", ".", "assert_bind_client", "(", ")", "self", ".", "_kudos", "=", "self", ".", "bind_client", ".", "get_activity_kudos", "(", "self", ".", "id", ")", "return"...	36.5	16.25
def prepare(host, default_protocol='telnet', **kwargs): """ Creates an instance of the protocol by either parsing the given URL-formatted hostname using :class:`Exscript.util.url`, or according to the options of the given :class:`Exscript.Host`. :type host: str or Host :param host: A URL-forma...	[ "def", "prepare", "(", "host", ",", "default_protocol", "=", "'telnet'", ",", "", "", "kwargs", ")", ":", "host", "=", "to_host", "(", "host", ",", "default_protocol", "=", "default_protocol", ")", "protocol", "=", "host", ".", "get_protocol", "(", ")", ...	40.454545	16.363636
def Read(self): """See base class.""" buf = ctypes.create_string_buffer(self.desc.internal_max_in_report_len) num_read = wintypes.DWORD() ret = kernel32.ReadFile( self.dev, buf, len(buf), ctypes.byref(num_read), None) if num_read.value != self.desc.internal_max_in_report_len: raise er...	[ "def", "Read", "(", "self", ")", ":", "buf", "=", "ctypes", ".", "create_string_buffer", "(", "self", ".", "desc", ".", "internal_max_in_report_len", ")", "num_read", "=", "wintypes", ".", "DWORD", "(", ")", "ret", "=", "kernel32", ".", "ReadFile", "(", ...	37	23.8125
def make_citation_dict(td): """ Update a citation dictionary by editing the Author field :param td: A BixTex format citation dict or a term :return: """ from datetime import datetime if isinstance(td, dict): d = td name = d['name_link'] else: d = td.as_dict() ...	[ "def", "make_citation_dict", "(", "td", ")", ":", "from", "datetime", "import", "datetime", "if", "isinstance", "(", "td", ",", "dict", ")", ":", "d", "=", "td", "name", "=", "d", "[", "'name_link'", "]", "else", ":", "d", "=", "td", ".", "as_dict", ...	25.463768	21.289855
def create_project(self, project_name, dataset_name, hostname, is_public, s3backend=0, kvserver='localhost', kvengine='MySQL', mdengine=...	[ "def", "create_project", "(", "self", ",", "project_name", ",", "dataset_name", ",", "hostname", ",", "is_public", ",", "s3backend", "=", "0", ",", "kvserver", "=", "'localhost'", ",", "kvengine", "=", "'MySQL'", ",", "mdengine", "=", "'MySQL'", ",", "descri...	34.26	15.66
def get_cache_key(path): """ Create a cache key by concatenating the prefix with a hash of the path. """ # Python 2/3 support for path hashing try: path_hash = hashlib.md5(path).hexdigest() except TypeError: path_hash = hashlib.md5(path.encode('utf-8')).hexdigest() return set...	[ "def", "get_cache_key", "(", "path", ")", ":", "# Python 2/3 support for path hashing", "try", ":", "path_hash", "=", "hashlib", ".", "md5", "(", "path", ")", ".", "hexdigest", "(", ")", "except", "TypeError", ":", "path_hash", "=", "hashlib", ".", "md5", "(...	34.5	14.5
def traceroute_batch(input_list, results={}, method="udp", cmd_arguments=None, delay_time=0.1, max_threads=100): """ This is a parallel version of the traceroute primitive. :param input_list: the input is a list of domain names :param method: the packet type used for traceroute, UD...	[ "def", "traceroute_batch", "(", "input_list", ",", "results", "=", "{", "}", ",", "method", "=", "\"udp\"", ",", "cmd_arguments", "=", "None", ",", "delay_time", "=", "0.1", ",", "max_threads", "=", "100", ")", ":", "threads", "=", "[", "]", "thread_erro...	36.716667	20.883333
def text_dict_write(fpath, dict_): """ Very naive, but readable way of storing a dictionary on disk FIXME: This broke on RoseMary's big dataset. Not sure why. It gave bad syntax. And the SyntaxError did not seem to be excepted. """ #dict_ = text_dict_read(fpath) #dict_[key] = val dict_te...	[ "def", "text_dict_write", "(", "fpath", ",", "dict_", ")", ":", "#dict_ = text_dict_read(fpath)", "#dict_[key] = val", "dict_text2", "=", "util_str", ".", "repr4", "(", "dict_", ",", "strvals", "=", "False", ")", "if", "VERBOSE", ":", "print", "(", "'[cache] '",...	37.583333	12.583333
def write_edges( edges: Mapping[str, Any], filename: str, jsonlines: bool = False, gzipflag: bool = False, yaml: bool = False, ): """Write edges to file Args: edges (Mapping[str, Any]): in edges JSON Schema format filename (str): filename to write jsonlines (bool): o...	[ "def", "write_edges", "(", "edges", ":", "Mapping", "[", "str", ",", "Any", "]", ",", "filename", ":", "str", ",", "jsonlines", ":", "bool", "=", "False", ",", "gzipflag", ":", "bool", "=", "False", ",", "yaml", ":", "bool", "=", "False", ",", ")",...	25.411765	16.647059
def process_raw_data(cls, raw_data): """Create a new model using raw API response.""" properties = raw_data["properties"] qos_settings = properties.get("qosSettings", {}) properties["qosSettings"] = VirtualSwtichQosSettings.from_raw_data( raw_data=qos_settings) return...	[ "def", "process_raw_data", "(", "cls", ",", "raw_data", ")", ":", "properties", "=", "raw_data", "[", "\"properties\"", "]", "qos_settings", "=", "properties", ".", "get", "(", "\"qosSettings\"", ",", "{", "}", ")", "properties", "[", "\"qosSettings\"", "]", ...	53.428571	14
def _recv_callback(self, msg): """ Method is called when there is a message coming from a Mongrel2 server. This message should be a valid Request String. """ m2req = MongrelRequest.parse(msg[0]) MongrelConnection(m2req, self._sending_stream, self.request_callback, ...	[ "def", "_recv_callback", "(", "self", ",", "msg", ")", ":", "m2req", "=", "MongrelRequest", ".", "parse", "(", "msg", "[", "0", "]", ")", "MongrelConnection", "(", "m2req", ",", "self", ".", "_sending_stream", ",", "self", ".", "request_callback", ",", "...	46.875	16.625
def _start_ubridge_capture(self, adapter_number, output_file): """ Start a packet capture in uBridge. :param adapter_number: adapter number :param output_file: PCAP destination file for the capture """ adapter = "bridge{}".format(adapter_number) if not self.ubri...	[ "def", "_start_ubridge_capture", "(", "self", ",", "adapter_number", ",", "output_file", ")", ":", "adapter", "=", "\"bridge{}\"", ".", "format", "(", "adapter_number", ")", "if", "not", "self", ".", "ubridge", ":", "raise", "DockerError", "(", "\"Cannot start t...	44.416667	24.583333
def limits(self, value, square=False): """TODO: doc + server side implementation""" if isinstance(value, six.string_types): import re match = re.match(r"(\d)(\D)", value) if match is None: raise ValueError("do not understand limit specifier %r, examp...	[ "def", "limits", "(", "self", ",", "value", ",", "square", "=", "False", ")", ":", "if", "isinstance", "(", "value", ",", "six", ".", "string_types", ")", ":", "import", "re", "match", "=", "re", ".", "match", "(", "r\"(\\d)(\\D)\"", ",", "value", ...	44.375	14.875
def dump_jwks(kbl, target, private=False): """ Write a JWK to a file. Will ignore symmetric keys !! :param kbl: List of KeyBundles :param target: Name of the file to which everything should be written :param private: Should also the private parts be exported """ keys = [] for kb in kbl...	[ "def", "dump_jwks", "(", "kbl", ",", "target", ",", "private", "=", "False", ")", ":", "keys", "=", "[", "]", "for", "kb", "in", "kbl", ":", "keys", ".", "extend", "(", "[", "k", ".", "serialize", "(", "private", ")", "for", "k", "in", "kb", "....	26.8	20.24
def list(self, argv): """List all current search jobs if no jobs specified, otherwise list the properties of the specified jobs.""" def read(job): for key in sorted(job.content.keys()): # Ignore some fields that make the output hard to read and # t...	[ "def", "list", "(", "self", ",", "argv", ")", ":", "def", "read", "(", "job", ")", ":", "for", "key", "in", "sorted", "(", "job", ".", "content", ".", "keys", "(", ")", ")", ":", "# Ignore some fields that make the output hard to read and", "# that are avail...	35.473684	17.631579
def slice_slice(old_slice, applied_slice, size): """Given a slice and the size of the dimension to which it will be applied, index it with another slice to return a new slice equivalent to applying the slices sequentially """ step = (old_slice.step or 1) * (applied_slice.step or 1) # For now, u...	[ "def", "slice_slice", "(", "old_slice", ",", "applied_slice", ",", "size", ")", ":", "step", "=", "(", "old_slice", ".", "step", "or", "1", ")", "*", "(", "applied_slice", ".", "step", "or", "1", ")", "# For now, use the hack of turning old_slice into an ndarray...	39	19.4
def is_url(text): """ Check if the given text looks like a URL. """ if text is None: return False text = text.lower() return text.startswith('http://') or text.startswith('https://') or \ text.startswith('urn:') or text.startswith('file://')	[ "def", "is_url", "(", "text", ")", ":", "if", "text", "is", "None", ":", "return", "False", "text", "=", "text", ".", "lower", "(", ")", "return", "text", ".", "startswith", "(", "'http://'", ")", "or", "text", ".", "startswith", "(", "'https://'", "...	38.142857	19.142857
def send_message(frm=None, to=None, text=None): """Shortcut to send a sms using libnexmo api. :param frm: The originator of the message :param to: The message's recipient :param text: The text message body Example usage: >>> send_message(to='+33123456789', text='My sms message body') """...	[ "def", "send_message", "(", "frm", "=", "None", ",", "to", "=", "None", ",", "text", "=", "None", ")", ":", "assert", "to", "is", "not", "None", "assert", "text", "is", "not", "None", "if", "frm", "is", "None", ":", "frm", "=", "settings", ".", "...	25.04	20.96
def get_confidence(self): """return confidence based on existing data""" # if we didn't receive any character in our consideration range, # return negative answer if self._mTotalChars <= 0 or self._mFreqChars <= MINIMUM_DATA_THRESHOLD: return SURE_NO if self._mTotalC...	[ "def", "get_confidence", "(", "self", ")", ":", "# if we didn't receive any character in our consideration range,", "# return negative answer", "if", "self", ".", "_mTotalChars", "<=", "0", "or", "self", ".", "_mFreqChars", "<=", "MINIMUM_DATA_THRESHOLD", ":", "return", "...	40.133333	20.8
def to_safe_str(s): """ converts some (tr) non-ascii chars to ascii counterparts, then return the result as lowercase """ # TODO: This is insufficient as it doesn't do anything for other non-ascii chars return re.sub(r'[^0-9a-zA-Z]+', '_', s.strip().replace(u'ğ', 'g').replace(u'ö', 'o').replace(...	[ "def", "to_safe_str", "(", "s", ")", ":", "# TODO: This is insufficient as it doesn't do anything for other non-ascii chars", "return", "re", ".", "sub", "(", "r'[^0-9a-zA-Z]+'", ",", "'_'", ",", "s", ".", "strip", "(", ")", ".", "replace", "(", "u'ğ',", " ", "g')...	55.8	26.8
def _build_loop(self, lexer): """Build saveframe loop. :param lexer: instance of lexical analyzer. :type lexer: :func:`~nmrstarlib.bmrblex.bmrblex` :return: Fields and values of the loop. :rtype: :py:class:`tuple` """ fields = [] values = [] toke...	[ "def", "_build_loop", "(", "self", ",", "lexer", ")", ":", "fields", "=", "[", "]", "values", "=", "[", "]", "token", "=", "next", "(", "lexer", ")", "while", "token", "[", "0", "]", "==", "u\"_\"", ":", "fields", ".", "append", "(", "token", "["...	32.64	20.6
def _add_disease_association_attributes(self, att_ind_start, att_mappings): """Add disease association information to the attribute mapping dictionary. :param int att_ind_start: Start index for enumerating the attributes. :param dict att_mappings: Dictionary of mappings between vertices and enu...	[ "def", "_add_disease_association_attributes", "(", "self", ",", "att_ind_start", ",", "att_mappings", ")", ":", "disease_mappings", "=", "self", ".", "get_disease_mappings", "(", "att_ind_start", ")", "for", "vertex", "in", "self", ".", "graph", ".", "vs", ":", ...	59.166667	25.333333
def onSelect_specimen(self, event): """ update figures and text when a new specimen is selected """ self.selected_meas = [] self.select_specimen(str(self.specimens_box.GetValue())) if self.ie_open: self.ie.change_selected(self.current_fit) self.update_...	[ "def", "onSelect_specimen", "(", "self", ",", "event", ")", ":", "self", ".", "selected_meas", "=", "[", "]", "self", ".", "select_specimen", "(", "str", "(", "self", ".", "specimens_box", ".", "GetValue", "(", ")", ")", ")", "if", "self", ".", "ie_ope...	35.888889	11
def handle(client_message, handle_event_member=None, handle_event_member_list=None, handle_event_member_attribute_change=None, to_object=None): """ Event handler """ message_type = client_message.get_message_type() if message_type == EVENT_MEMBER and handle_event_member is not None: member = MemberC...	[ "def", "handle", "(", "client_message", ",", "handle_event_member", "=", "None", ",", "handle_event_member_list", "=", "None", ",", "handle_event_member_attribute_change", "=", "None", ",", "to_object", "=", "None", ")", ":", "message_type", "=", "client_message", "...	57.409091	21.818182
def model(self, voltages=True, sensitivities=False, potentials=False, output_directory=None, silent=False, ): """Forward model the tomodir and read in the results """ self._check_state() if self.can_model...	[ "def", "model", "(", "self", ",", "voltages", "=", "True", ",", "sensitivities", "=", "False", ",", "potentials", "=", "False", ",", "output_directory", "=", "None", ",", "silent", "=", "False", ",", ")", ":", "self", ".", "_check_state", "(", ")", "if...	36.694444	16.333333
def fix_queue_critical(self): """ This function tries to fix critical events originating from the queue submission system. Returns the number of tasks that have been fixed. """ count = 0 for task in self.iflat_tasks(status=self.S_QCRITICAL): logger.info("Will...	[ "def", "fix_queue_critical", "(", "self", ")", ":", "count", "=", "0", "for", "task", "in", "self", ".", "iflat_tasks", "(", "status", "=", "self", ".", "S_QCRITICAL", ")", ":", "logger", ".", "info", "(", "\"Will try to fix task %s\"", "%", "str", "(", ...	34.8125	19.9375
def get_bgcolor(self, index): """Background color depending on value""" value = self.get_value(index) if index.column() < 3: color = ReadOnlyCollectionsModel.get_bgcolor(self, index) else: if self.remote: color_name = value['color'] ...	[ "def", "get_bgcolor", "(", "self", ",", "index", ")", ":", "value", "=", "self", ".", "get_value", "(", "index", ")", "if", "index", ".", "column", "(", ")", "<", "3", ":", "color", "=", "ReadOnlyCollectionsModel", ".", "get_bgcolor", "(", "self", ",",...	35.769231	11.923077
def set_scenario_status(scenario_id, status, **kwargs): """ Set the status of a scenario. """ user_id = kwargs.get('user_id') _check_can_edit_scenario(scenario_id, kwargs['user_id']) scenario_i = _get_scenario(scenario_id, user_id) scenario_i.status = status db.DBSession.flush() ...	[ "def", "set_scenario_status", "(", "scenario_id", ",", "status", ",", "", "", "kwargs", ")", ":", "user_id", "=", "kwargs", ".", "get", "(", "'user_id'", ")", "_check_can_edit_scenario", "(", "scenario_id", ",", "kwargs", "[", "'user_id'", "]", ")", "scena...	23	19
def remove_bookmark(self, time): """User removes bookmark. Parameters ---------- time : tuple of float start and end of the new bookmark, in s """ self.annot.remove_bookmark(time=time) self.update_annotations()	[ "def", "remove_bookmark", "(", "self", ",", "time", ")", ":", "self", ".", "annot", ".", "remove_bookmark", "(", "time", "=", "time", ")", "self", ".", "update_annotations", "(", ")" ]	27	12.6
def get_params(self, pnames=None): """ Return a list of Parameter objects Parameters ---------- pname : list or None If a list get the Parameter objects with those names If none, get all the Parameter objects Returns ------- params : lis...	[ "def", "get_params", "(", "self", ",", "pnames", "=", "None", ")", ":", "l", "=", "[", "]", "if", "pnames", "is", "None", ":", "pnames", "=", "self", ".", "params", ".", "keys", "(", ")", "for", "pname", "in", "pnames", ":", "p", "=", "self", "...	22	19.576923
def scale2x(self, surface): """ Scales using the AdvanceMAME Scale2X algorithm which does a 'jaggie-less' scale of bitmap graphics. """ assert(self._scale == 2) return self._pygame.transform.scale2x(surface)	[ "def", "scale2x", "(", "self", ",", "surface", ")", ":", "assert", "(", "self", ".", "_scale", "==", "2", ")", "return", "self", ".", "_pygame", ".", "transform", ".", "scale2x", "(", "surface", ")" ]	35.571429	9.857143
def handle_user(self, params): """ Handle the USER command which identifies the user to the server. """ params = params.split(' ', 3) if len(params) != 4: raise IRCError.from_name( 'needmoreparams', 'USER :Not enough parameters') ...	[ "def", "handle_user", "(", "self", ",", "params", ")", ":", "params", "=", "params", ".", "split", "(", "' '", ",", "3", ")", "if", "len", "(", "params", ")", "!=", "4", ":", "raise", "IRCError", ".", "from_name", "(", "'needmoreparams'", ",", "'USER...	27.9375	13.8125
def _get_parser(self, env): """ Creates base argument parser. `env` Runtime ``Environment`` instance. * Raises ``HelpBanner`` exception when certain conditions apply. Returns ``FocusArgumentParser`` object. """ version_str = 'focus vers...	[ "def", "_get_parser", "(", "self", ",", "env", ")", ":", "version_str", "=", "'focus version '", "+", "__version__", "usage_str", "=", "'focus [-h] [-v] [--no-color] <command> [<args>]'", "# setup parser", "parser", "=", "FocusArgParser", "(", "description", "=", "(", ...	39	23.202899
def correlation_matrix(nums_with_uncert): """ Calculate the correlation matrix of uncertain variables, oriented by the order of the inputs Parameters ---------- nums_with_uncert : array-like A list of variables that have an associated uncertainty Returns ------- cor...	[ "def", "correlation_matrix", "(", "nums_with_uncert", ")", ":", "ufuncs", "=", "list", "(", "map", "(", "to_uncertain_func", ",", "nums_with_uncert", ")", ")", "data", "=", "np", ".", "vstack", "(", "[", "ufunc", ".", "_mcpts", "for", "ufunc", "in", "ufunc...	27.533333	18.533333
def enabled(name='allprofiles'): ''' Enable all the firewall profiles (Windows only) Args: profile (Optional[str]): The name of the profile to enable. Default is ``allprofiles``. Valid options are: - allprofiles - domainprofile - privateprofile ...	[ "def", "enabled", "(", "name", "=", "'allprofiles'", ")", ":", "ret", "=", "{", "'name'", ":", "name", ",", "'result'", ":", "True", ",", "'changes'", ":", "{", "}", ",", "'comment'", ":", "''", "}", "profile_map", "=", "{", "'domainprofile'", ":", "...	29.162162	20.27027
def parse_directives(lexer: Lexer, is_const: bool) -> List[DirectiveNode]: """Directives[Const]: Directive[?Const]+""" directives: List[DirectiveNode] = [] append = directives.append while peek(lexer, TokenKind.AT): append(parse_directive(lexer, is_const)) return directives	[ "def", "parse_directives", "(", "lexer", ":", "Lexer", ",", "is_const", ":", "bool", ")", "->", "List", "[", "DirectiveNode", "]", ":", "directives", ":", "List", "[", "DirectiveNode", "]", "=", "[", "]", "append", "=", "directives", ".", "append", "whil...	42.285714	10.714286
def rows_from_csv(filename, predicate=None, encoding='utf-8'): """\ Returns an iterator over all rows in the provided CSV `filename`. `filename` Absolute path to a file to read the cables from. The file must be a CSV file with the following columns: <identifier>, <creation-date>, <r...	[ "def", "rows_from_csv", "(", "filename", ",", "predicate", "=", "None", ",", "encoding", "=", "'utf-8'", ")", ":", "pred", "=", "predicate", "or", "bool", "with", "open", "(", "filename", ",", "'rb'", ")", "as", "f", ":", "for", "row", "in", "_UnicodeR...	55.625	29.5
def consume_asset(event, agreement_id, did, service_agreement, consumer_account, consume_callback): """ Consumption of an asset after get the event call. :param event: AttributeDict with the event data. :param agreement_id: id of the agreement, hex str :param did: DID, str :param service_agreem...	[ "def", "consume_asset", "(", "event", ",", "agreement_id", ",", "did", ",", "service_agreement", ",", "consumer_account", ",", "consume_callback", ")", ":", "logger", ".", "debug", "(", "f\"consuming asset after event {event}.\"", ")", "if", "consume_callback", ":", ...	37.714286	19
def _store_compressed_sequence_to_node(self, node): """ make a compressed representation of a pair of sequences only counting the number of times a particular pair of states (e.g. (A,T)) is observed the the aligned sequences of parent and child. Parameters ----------- ...	[ "def", "_store_compressed_sequence_to_node", "(", "self", ",", "node", ")", ":", "seq_pairs", ",", "multiplicity", "=", "self", ".", "gtr", ".", "compress_sequence_pair", "(", "node", ".", "up", ".", "cseq", ",", "node", ".", "cseq", ",", "pattern_multiplicity...	46.5	26.6
def coords_from_query(query): """Transform a query line into a (lng, lat) pair of coordinates.""" try: coords = json.loads(query) except ValueError: query = query.replace(',', ' ') vals = query.split() coords = [float(v) for v in vals] return tuple(coords[:2])	[ "def", "coords_from_query", "(", "query", ")", ":", "try", ":", "coords", "=", "json", ".", "loads", "(", "query", ")", "except", "ValueError", ":", "query", "=", "query", ".", "replace", "(", "','", ",", "' '", ")", "vals", "=", "query", ".", "split...	33.333333	10.333333
def _remove_hidden_parts(projected_surface): """Removes parts of a projected surface that are not visible. Args: projected_surface (surface): the surface to use Returns: surface: A projected surface. """ surface = np.copy(projected_surface) surface[~_make_occlusion_mask(project...	[ "def", "_remove_hidden_parts", "(", "projected_surface", ")", ":", "surface", "=", "np", ".", "copy", "(", "projected_surface", ")", "surface", "[", "~", "_make_occlusion_mask", "(", "projected_surface", ")", "]", "=", "np", ".", "nan", "return", "surface" ]	29.083333	17.083333
def main(): '''Calculate the depth of a liquid in centimeters using a HCSR04 sensor and a Raspberry Pi''' trig_pin = 17 echo_pin = 27 # Default values # unit = 'metric' # temperature = 20 # round_to = 1 hole_depth = 80 # centimeters # Create a distance reading with the hc...	[ "def", "main", "(", ")", ":", "trig_pin", "=", "17", "echo_pin", "=", "27", "# Default values", "# unit = 'metric'", "# temperature = 20", "# round_to = 1", "hole_depth", "=", "80", "# centimeters", "# Create a distance reading with the hcsr04 sensor module", "value", "=", ...	29.030303	21.151515
def flag(name=None): """ Creates the grammar for a Flag (F) field, accepting only 'Y', 'N' or 'U'. :param name: name for the field :return: grammar for the flag field """ if name is None: name = 'Flag Field' # Basic field field = pp.Regex('[YNU]') # Name field.setName...	[ "def", "flag", "(", "name", "=", "None", ")", ":", "if", "name", "is", "None", ":", "name", "=", "'Flag Field'", "# Basic field", "field", "=", "pp", ".", "Regex", "(", "'[YNU]'", ")", "# Name", "field", ".", "setName", "(", "name", ")", "field", "."...	17.7	22.7
def clear(self, username, project): """Clear the cache for given project.""" method = 'DELETE' url = ('/project/{username}/{project}/build-cache?' 'circle-token={token}'.format(username=username, project=project, ...	[ "def", "clear", "(", "self", ",", "username", ",", "project", ")", ":", "method", "=", "'DELETE'", "url", "=", "(", "'/project/{username}/{project}/build-cache?'", "'circle-token={token}'", ".", "format", "(", "username", "=", "username", ",", "project", "=", "p...	49	16.111111
def get(self, community_id): """Get the details of the specified community. .. http:get:: /communities/(string:id) Returns a JSON dictionary with the details of the specified community. Request: .. sourcecode:: http GET /communities/co...	[ "def", "get", "(", "self", ",", "community_id", ")", ":", "community", "=", "Community", ".", "get", "(", "community_id", ")", "if", "not", "community", ":", "abort", "(", "404", ")", "etag", "=", "community", ".", "version_id", "self", ".", "check_etag"...	36.209302	12.046512
def get_schema_input_version(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") get_schema = ET.Element("get_schema") config = get_schema input = ET.SubElement(get_schema, "input") version = ET.SubElement(input, "version") version.te...	[ "def", "get_schema_input_version", "(", "self", ",", "", "", "kwargs", ")", ":", "config", "=", "ET", ".", "Element", "(", "\"config\"", ")", "get_schema", "=", "ET", ".", "Element", "(", "\"get_schema\"", ")", "config", "=", "get_schema", "input", "=", ...	35.5	9.583333
def get_all(symbol): """ Get all available quote data for the given ticker symbol. Returns a dictionary. """ ids = \ 'ydb2r1b3qpoc1d1cd2c6t1k2p2c8m5c3m6gm7hm8k1m3lm4l1t8w1g1w4g3p' \ '1g4mg5m2g6kvjj1j5j3k4f6j6nk5n4ws1xj2va5b6k3t7a2t615l2el3e7v1' \ 'e8v7e9s6b4j4p5p6rr2r5r6r7s7...	[ "def", "get_all", "(", "symbol", ")", ":", "ids", "=", "'ydb2r1b3qpoc1d1cd2c6t1k2p2c8m5c3m6gm7hm8k1m3lm4l1t8w1g1w4g3p'", "'1g4mg5m2g6kvjj1j5j3k4f6j6nk5n4ws1xj2va5b6k3t7a2t615l2el3e7v1'", "'e8v7e9s6b4j4p5p6rr2r5r6r7s7'", "values", "=", "_request", "(", "symbol", ",", "ids", ")", ...	34.468085	8.914894
def is_closed(self) -> Optional[bool]: """For Magnet Sensor; True if Closed, False if Open.""" if self._device_type is not None and self._device_type == DeviceType.DoorMagnet: return bool(self._current_status & 0x01) return None	[ "def", "is_closed", "(", "self", ")", "->", "Optional", "[", "bool", "]", ":", "if", "self", ".", "_device_type", "is", "not", "None", "and", "self", ".", "_device_type", "==", "DeviceType", ".", "DoorMagnet", ":", "return", "bool", "(", "self", ".", "...	52	16.6
def _create_skeleton_3(pc, l, num_section): """ Bottom level: {"measurement": [], "model": [{summary, distributions, ensemble}]} Fill in measurement and model tables with N number of EMPTY meas, summary, ensemble, and distributions. :param str pc: Paleo or Chron "mode" :param list l: :param dict...	[ "def", "_create_skeleton_3", "(", "pc", ",", "l", ",", "num_section", ")", ":", "logger_excel", ".", "info", "(", "\"enter create_skeleton_inner_2\"", ")", "# Table Template: Model", "template_model", "=", "{", "\"summaryTable\"", ":", "{", "}", ",", "\"ensembleTabl...	43.636364	26.227273
def emg_tkeo(emg): """ Calculates the Teager–Kaiser Energy operator. Parameters ---------- emg : array raw EMG signal. Returns ------- tkeo : 1D array_like signal processed by the Teager–Kaiser Energy operator. Notes ----- Authors - Marcos Duarte ...	[ "def", "emg_tkeo", "(", "emg", ")", ":", "emg", "=", "np", ".", "asarray", "(", "emg", ")", "tkeo", "=", "np", ".", "copy", "(", "emg", ")", "# Teager–Kaiser Energy operator", "tkeo", "[", "1", ":", "-", "1", "]", "=", "emg", "[", "1", ":", "-", ...	17.375	25.625
def OnActivateCard(self, card): """Called when a card is activated by double-clicking on the card or reader tree control or toolbar. In this sample, we just connect to the card on the first activation.""" SimpleSCardAppEventObserver.OnActivateCard(self, card) self.feedbacktext.Se...	[ "def", "OnActivateCard", "(", "self", ",", "card", ")", ":", "SimpleSCardAppEventObserver", ".", "OnActivateCard", "(", "self", ",", "card", ")", "self", ".", "feedbacktext", ".", "SetLabel", "(", "'Activated card: '", "+", "repr", "(", "card", ")", ")", "se...	55.714286	10.857143
def predict_topk(self, dataset, output_type="probability", k=3, batch_size=64): """ Return top-k predictions for the ``dataset``, using the trained model. Predictions are returned as an SFrame with three columns: `id`, `class`, and `probability`, `margin`, or `rank`, depending on the ``...	[ "def", "predict_topk", "(", "self", ",", "dataset", ",", "output_type", "=", "\"probability\"", ",", "k", "=", "3", ",", "batch_size", "=", "64", ")", ":", "if", "not", "isinstance", "(", "dataset", ",", "(", "_tc", ".", "SFrame", ",", "_tc", ".", "S...	40.875	21.75
def backup(host=None, core_name=None, append_core_to_path=False): ''' Tell solr make a backup. This method can be mis-leading since it uses the backup API. If an error happens during the backup you are not notified. The status: 'OK' in the response simply means that solr received the request succe...	[ "def", "backup", "(", "host", "=", "None", ",", "core_name", "=", "None", ",", "append_core_to_path", "=", "False", ")", ":", "path", "=", "__opts__", "[", "'solr.backup_path'", "]", "num_backups", "=", "__opts__", "[", "'solr.num_backups'", "]", "if", "path...	39.084746	20.983051
def plot_zed(ZED, datablock, angle, s, units): """ function to make equal area plot and zijderveld plot Parameters _________ ZED : dictionary with keys for plots eqarea : figure number for equal area projection zijd : figure number for zijderveld plot demag : figure numb...	[ "def", "plot_zed", "(", "ZED", ",", "datablock", ",", "angle", ",", "s", ",", "units", ")", ":", "for", "fignum", "in", "list", "(", "ZED", ".", "keys", "(", ")", ")", ":", "fig", "=", "plt", ".", "figure", "(", "num", "=", "ZED", "[", "fignum"...	35.957746	18.43662
def _addSexSpecificity(self, subject_id, sex): """ Add sex specificity to a subject (eg association node) In our modeling we use this to add a qualifier to a triple for example, this genotype to phenotype association is specific to this sex (see MGI, IMPC) This expects ...	[ "def", "_addSexSpecificity", "(", "self", ",", "subject_id", ",", "sex", ")", ":", "self", ".", "graph", ".", "addTriple", "(", "subject_id", ",", "self", ".", "globaltt", "[", "'has_sex_specificty'", "]", ",", "sex", ")" ]	36.333333	21.111111
def execute(self, args, kwargs): """ Initializes and runs the tool. This is shorhand to parse command line arguments, then calling: self.setup(parsed_arguments) self.process() """ args = self.parser.parse_args(args, **kwargs) self.process(args...	[ "def", "execute", "(", "self", ",", "", "args", ",", "", "", "kwargs", ")", ":", "args", "=", "self", ".", "parser", ".", "parse_args", "(", "", "args", ",", "", "", "kwargs", ")", "self", ".", "process", "(", "args", ")" ]	31.2	12
def array(source_array, ctx=None, dtype=None): """Creates an array from any object exposing the array interface. Parameters ---------- source_array : array_like An object exposing the array interface, an object whose `__array__` method returns an array, or any (nested) sequence. ctx...	[ "def", "array", "(", "source_array", ",", "ctx", "=", "None", ",", "dtype", "=", "None", ")", ":", "if", "isinstance", "(", "source_array", ",", "NDArray", ")", ":", "dtype", "=", "source_array", ".", "dtype", "if", "dtype", "is", "None", "else", "dtyp...	37.677419	21.032258
def great_circle_dist(lat1, lon1, lat2, lon2): """ Get the distance (in meters) between two lat/lon points via the Haversine formula. Parameters ---------- lat1, lon1, lat2, lon2 : float Latitude and longitude in degrees. Returns ------- dist : float Distance in met...	[ "def", "great_circle_dist", "(", "lat1", ",", "lon1", ",", "lat2", ",", "lon2", ")", ":", "radius", "=", "6372795", "# meters", "lat1", "=", "math", ".", "radians", "(", "lat1", ")", "lon1", "=", "math", ".", "radians", "(", "lon1", ")", "lat2", "=",...	23.424242	20.757576
def analytical(src, rec, res, freqtime, solution='fs', signal=None, ab=11, aniso=None, epermH=None, epermV=None, mpermH=None, mpermV=None, verb=2): r"""Return the analytical full- or half-space solution. Calculate the electromagnetic frequency- or time-domain field due to infi...	[ "def", "analytical", "(", "src", ",", "rec", ",", "res", ",", "freqtime", ",", "solution", "=", "'fs'", ",", "signal", "=", "None", ",", "ab", "=", "11", ",", "aniso", "=", "None", ",", "epermH", "=", "None", ",", "epermV", "=", "None", ",", "mpe...	42.617117	25.040541
def on_close_shortcut(self, *args): """Close selected state machine (triggered by shortcut)""" state_machine_m = self.model.get_selected_state_machine_model() if state_machine_m is None: return self.on_close_clicked(None, state_machine_m, None, force=False)	[ "def", "on_close_shortcut", "(", "self", ",", "*", "args", ")", ":", "state_machine_m", "=", "self", ".", "model", ".", "get_selected_state_machine_model", "(", ")", "if", "state_machine_m", "is", "None", ":", "return", "self", ".", "on_close_clicked", "(", "N...	49.333333	15.666667
def update_picks(self, games=None, points=None): ''' games can be dict of {game.id: winner_id} for all picked games to update ''' if games: game_dict = {g.id: g for g in self.gameset.games.filter(id__in=games)} game_picks = {pick.game.id: pick for pick in self.gam...	[ "def", "update_picks", "(", "self", ",", "games", "=", "None", ",", "points", "=", "None", ")", ":", "if", "games", ":", "game_dict", "=", "{", "g", ".", "id", ":", "g", "for", "g", "in", "self", ".", "gameset", ".", "games", ".", "filter", "(", ...	39.4	21.5
def find_common(self, l): """ Find common parts in thelist items ex: 'ab' for ['abcd','abce','abf'] requires an ordered list """ if len(l) == 1: return l[0] init = l[0] for item in l[1:]: for i, (x, y) in enumerate(zip(init, item)): ...	[ "def", "find_common", "(", "self", ",", "l", ")", ":", "if", "len", "(", "l", ")", "==", "1", ":", "return", "l", "[", "0", "]", "init", "=", "l", "[", "0", "]", "for", "item", "in", "l", "[", "1", ":", "]", ":", "for", "i", ",", "(", "...	26	17.111111
def remove_constraint(self, name): """Remove a constraint from the problem""" index = self._get_constraint_index(name) # Remove from matrix self._A = np.delete(self.A, index, 0) # Remove from upper_bounds self.upper_bounds = np.delete(self.upper_bounds, index) # R...	[ "def", "remove_constraint", "(", "self", ",", "name", ")", ":", "index", "=", "self", ".", "_get_constraint_index", "(", "name", ")", "# Remove from matrix", "self", ".", "_A", "=", "np", ".", "delete", "(", "self", ".", "A", ",", "index", ",", "0", ")...	40.454545	7.181818
def child_task(self): '''child process - this holds all the GUI elements''' mp_util.child_close_fds() import matplotlib import wx_processguard from wx_loader import wx from live_graph_ui import GraphFrame matplotlib.use('WXAgg') app = wx.App(Fals...	[ "def", "child_task", "(", "self", ")", ":", "mp_util", ".", "child_close_fds", "(", ")", "import", "matplotlib", "import", "wx_processguard", "from", "wx_loader", "import", "wx", "from", "live_graph_ui", "import", "GraphFrame", "matplotlib", ".", "use", "(", "'W...	28.571429	15.285714
def mode_date(self, rows: List[Row], column: DateColumn) -> Date: """ Takes a list of rows and a column and returns the most frequent value under that column in those rows. """ most_frequent_list = self._get_most_frequent_values(rows, column) if not most_frequent_list: ...	[ "def", "mode_date", "(", "self", ",", "rows", ":", "List", "[", "Row", "]", ",", "column", ":", "DateColumn", ")", "->", "Date", ":", "most_frequent_list", "=", "self", ".", "_get_most_frequent_values", "(", "rows", ",", "column", ")", "if", "not", "most...	47.583333	16.25
def run_jar(jar_name, more_args=None, properties=None, hadoop_conf_dir=None, keep_streams=True): """ Run a jar on Hadoop (``hadoop jar`` command). All arguments are passed to :func:`run_cmd` (``args = [jar_name] + more_args``) . """ if hu.is_readable(jar_name): args = [jar_n...	[ "def", "run_jar", "(", "jar_name", ",", "more_args", "=", "None", ",", "properties", "=", "None", ",", "hadoop_conf_dir", "=", "None", ",", "keep_streams", "=", "True", ")", ":", "if", "hu", ".", "is_readable", "(", "jar_name", ")", ":", "args", "=", "...	32.777778	17.444444
def _retrieve_certificate(self, access_token, timeout=3): """ Generates a new private key and certificate request, submits the request to be signed by the SLCS CA and returns the certificate. """ logger.debug("Retrieve certificate with token.") # Generate a new key pair ...	[ "def", "_retrieve_certificate", "(", "self", ",", "access_token", ",", "timeout", "=", "3", ")", ":", "logger", ".", "debug", "(", "\"Retrieve certificate with token.\"", ")", "# Generate a new key pair", "key_pair", "=", "crypto", ".", "PKey", "(", ")", "key_pair...	37.045455	20.909091
def itemgetter(k, ellipsis=False, key=None): """ Looks up ``k`` as an index of the column's value. If ``k`` is a ``slice`` type object, then ``ellipsis`` can be given as a string to use to indicate truncation. Alternatively, ``ellipsis`` can be set to ``True`` to use a default ``'...'``. If a...	[ "def", "itemgetter", "(", "k", ",", "ellipsis", "=", "False", ",", "key", "=", "None", ")", ":", "def", "helper", "(", "instance", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "default_value", "=", "kwargs", ".", "get", "(", "'default_value'"...	37.736842	24.315789
def _ParseRecordLogline(self, parser_mediator, structure): """Parses a logline record structure and produces events. Args: parser_mediator (ParserMediator): mediates interactions between parsers and other components, such as storage and dfvfs. structure (pyparsing.ParseResults): structure...	[ "def", "_ParseRecordLogline", "(", "self", ",", "parser_mediator", ",", "structure", ")", ":", "date_time", "=", "dfdatetime_time_elements", ".", "TimeElementsInMilliseconds", "(", ")", "try", ":", "datetime_iso8601", "=", "self", ".", "_GetISO8601String", "(", "str...	40.064516	21.290323
def get_response_code(url, timeout=10): ''' Visit the URL and return the HTTP response code in 'int' ''' try: req = urllib2.urlopen(url, timeout=timeout) except HTTPError, e: return e.getcode() except Exception, _: fail("Couldn't reach the URL '%s'" % url) else: ...	[ "def", "get_response_code", "(", "url", ",", "timeout", "=", "10", ")", ":", "try", ":", "req", "=", "urllib2", ".", "urlopen", "(", "url", ",", "timeout", "=", "timeout", ")", "except", "HTTPError", ",", "e", ":", "return", "e", ".", "getcode", "(",...	28	18.666667
def is_question_answered(self, question_id): """has the question matching item_id been answered and not skipped""" question_map = self._get_question_map(question_id) # will raise NotFound() if 'missingResponse' in question_map['responses'][0]: return False else: ...	[ "def", "is_question_answered", "(", "self", ",", "question_id", ")", ":", "question_map", "=", "self", ".", "_get_question_map", "(", "question_id", ")", "# will raise NotFound()", "if", "'missingResponse'", "in", "question_map", "[", "'responses'", "]", "[", "0", ...	46.428571	18.285714
def _run_program(self, bin, fastafile, params=None): """ Run Trawler and predict motifs from a FASTA file. Parameters ---------- bin : str Command used to run the tool. fastafile : str Name of the FASTA input file. params : dict,...	[ "def", "_run_program", "(", "self", ",", "bin", ",", "fastafile", ",", "params", "=", "None", ")", ":", "params", "=", "self", ".", "_parse_params", "(", "params", ")", "tmp", "=", "NamedTemporaryFile", "(", "mode", "=", "\"w\"", ",", "dir", "=", "self...	31.518987	17.037975
def add_field(self, name: str, value: str, inline: bool = True) -> None: """ Adds an embed field. Parameters ---------- name: str Name attribute of the embed field. value: str Value attribute of the embed field. inline: bool ...	[ "def", "add_field", "(", "self", ",", "name", ":", "str", ",", "value", ":", "str", ",", "inline", ":", "bool", "=", "True", ")", "->", "None", ":", "field", "=", "{", "'name'", ":", "name", ",", "'value'", ":", "value", ",", "'inline'", ":", "in...	23.347826	19.26087
def verify_item_signature(signature_attribute, encrypted_item, verification_key, crypto_config): # type: (dynamodb_types.BINARY_ATTRIBUTE, dynamodb_types.ITEM, DelegatedKey, CryptoConfig) -> None """Verify the item signature. :param dict signature_attribute: Item signature DynamoDB attribute value :par...	[ "def", "verify_item_signature", "(", "signature_attribute", ",", "encrypted_item", ",", "verification_key", ",", "crypto_config", ")", ":", "# type: (dynamodb_types.BINARY_ATTRIBUTE, dynamodb_types.ITEM, DelegatedKey, CryptoConfig) -> None", "signature", "=", "signature_attribute", "...	46.789474	24.473684
def getComponentExceptionSummary(self, tmaster, component_name, instances=[], callback=None): """ Get the summary of exceptions for component_name and list of instances. Empty instance list will fetch all exceptions. """ if not tmaster or not tmaster.host or not tmaster.stats_port: return ...	[ "def", "getComponentExceptionSummary", "(", "self", ",", "tmaster", ",", "component_name", ",", "instances", "=", "[", "]", ",", "callback", "=", "None", ")", ":", "if", "not", "tmaster", "or", "not", "tmaster", ".", "host", "or", "not", "tmaster", ".", ...	40.381818	18.127273
def colorize(self, col, row, value=None): 'Returns curses attribute for the given col/row/value' # colorstack = tuple(c.coloropt for c in self.getColorizers() if wrapply(c.func, self, col, row, value)) colorstack = [] for colorizer in self.getColorizers(): try: ...	[ "def", "colorize", "(", "self", ",", "col", ",", "row", ",", "value", "=", "None", ")", ":", "# colorstack = tuple(c.coloropt for c in self.getColorizers() if wrapply(c.func, self, col, row, value))", "colorstack", "=", "[", "]", "for", "colorizer", "in", "self", ...	39.066667	24.666667
def to_mef(data, channels, sc_list, sc_channels = None): """ Transform flow cytometry data using a standard curve function. This function accepts a list of standard curves (`sc_list`) and a list of channels to which those standard curves should be applied (`sc_channels`). `to_mef` automatically che...	[ "def", "to_mef", "(", "data", ",", "channels", ",", "sc_list", ",", "sc_channels", "=", "None", ")", ":", "# Default sc_channels", "if", "sc_channels", "is", "None", ":", "if", "data", ".", "ndim", "==", "1", ":", "sc_channels", "=", "range", "(", "data"...	35.393258	19.707865
def _remove(self, telegram): """ Remove telegram from buffer and incomplete data preceding it. This is easier than validating the data before adding it to the buffer. :param str telegram: :return: """ # Remove data leading up to the telegram and the telegram itsel...	[ "def", "_remove", "(", "self", ",", "telegram", ")", ":", "# Remove data leading up to the telegram and the telegram itself.", "index", "=", "self", ".", "_buffer", ".", "index", "(", "telegram", ")", "+", "len", "(", "telegram", ")", "self", ".", "_buffer", "="...	38	19.272727
def inline(self) -> str: """ Return inline string format of the instance :return: """ return "{0}:{1}".format(self.index, ' '.join([str(p) for p in self.parameters]))	[ "def", "inline", "(", "self", ")", "->", "str", ":", "return", "\"{0}:{1}\"", ".", "format", "(", "self", ".", "index", ",", "' '", ".", "join", "(", "[", "str", "(", "p", ")", "for", "p", "in", "self", ".", "parameters", "]", ")", ")" ]	28.714286	19.857143
def dump_config(self): """Pretty print the configuration dict to stdout.""" yaml_content = self.get_merged_config() print('YAML Configuration\n%s\n' % yaml_content.read()) try: self.load() print('Python Configuration\n%s\n' % pretty(self.yamldocs)) except ...	[ "def", "dump_config", "(", "self", ")", ":", "yaml_content", "=", "self", ".", "get_merged_config", "(", ")", "print", "(", "'YAML Configuration\\n%s\\n'", "%", "yaml_content", ".", "read", "(", ")", ")", "try", ":", "self", ".", "load", "(", ")", "print",...	40.636364	18.818182
def to_special_value(self, value): """Checks if value is a special SPDX value such as NONE, NOASSERTION or UNKNOWN if so returns proper model. else returns value""" if value == self.spdx_namespace.none: return utils.SPDXNone() elif value == self.spdx_namespace.noasser...	[ "def", "to_special_value", "(", "self", ",", "value", ")", ":", "if", "value", "==", "self", ".", "spdx_namespace", ".", "none", ":", "return", "utils", ".", "SPDXNone", "(", ")", "elif", "value", "==", "self", ".", "spdx_namespace", ".", "noassertion", ...	39.583333	9.833333
def make_ccys(db): ''' Create the currency dictionary ''' dfr = 4 dollar = r'\u0024' peso = r'\u20b1' kr = r'kr' insert = db.insert # G10 & SCANDI insert('EUR', '978', 'EU', 1, 'Euro', dfr, 'EU', '30/360', 'ACT/360', future='FE', symbol=r'\u20ac', html='&#x...	[ "def", "make_ccys", "(", "db", ")", ":", "dfr", "=", "4", "dollar", "=", "r'\\u0024'", "peso", "=", "r'\\u20b1'", "kr", "=", "r'kr'", "insert", "=", "db", ".", "insert", "# G10 & SCANDI", "insert", "(", "'EUR'", ",", "'978'", ",", "'EU'", ",", "1", "...	39.958333	11.446429
def catalogue_mt_filter(self, mt_table, flag=None): """ Filter the catalogue using a magnitude-time table. The table has two columns and n-rows. :param nump.ndarray mt_table: Magnitude time table with n-rows where column 1 is year and column 2 is magnitude ...	[ "def", "catalogue_mt_filter", "(", "self", ",", "mt_table", ",", "flag", "=", "None", ")", ":", "if", "flag", "is", "None", ":", "# No flag defined, therefore all events are initially valid", "flag", "=", "np", ".", "ones", "(", "self", ".", "get_number_events", ...	36.904762	19.857143
def _get_id_from_username(self, username): """Looks up a username's id :param string username: Username to lookup :returns: The id that matches username. """ _mask = "mask[id, username]" _filter = {'users': {'username': utils.query_filter(username)}} user = self....	[ "def", "_get_id_from_username", "(", "self", ",", "username", ")", ":", "_mask", "=", "\"mask[id, username]\"", "_filter", "=", "{", "'users'", ":", "{", "'username'", ":", "utils", ".", "query_filter", "(", "username", ")", "}", "}", "user", "=", "self", ...	41.4	17.533333
def hide_arp_holder_arp_entry_interfacetype_Port_channel_Port_channel(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") hide_arp_holder = ET.SubElement(config, "hide-arp-holder", xmlns="urn:brocade.com:mgmt:brocade-arp") arp_entry = ET.SubElement(hide_arp_...	[ "def", "hide_arp_holder_arp_entry_interfacetype_Port_channel_Port_channel", "(", "self", ",", "", "", "kwargs", ")", ":", "config", "=", "ET", ".", "Element", "(", "\"config\"", ")", "hide_arp_holder", "=", "ET", ".", "SubElement", "(", "config", ",", "\"hide-ar...	53.866667	23.4
def _get_merged_params_string(self): """Returns the merged nextflow params string from a dictionary object. The params dict should be a set of key:value pairs with the parameter name, and the default parameter value:: self.params = { "genomeSize": 2.1, ...	[ "def", "_get_merged_params_string", "(", "self", ")", ":", "params_temp", "=", "{", "}", "for", "p", "in", "self", ".", "processes", ":", "logger", ".", "debug", "(", "\"[{}] Adding parameters: {}\"", ".", "format", "(", "p", ".", "template", ",", "p", "."...	30.3	24.825
def get_requirements_file_from_url(url): """fetches the requiremets from the url""" response = requests.get(url) if response.status_code == 200: return StringIO(response.text) else: return StringIO("")	[ "def", "get_requirements_file_from_url", "(", "url", ")", ":", "response", "=", "requests", ".", "get", "(", "url", ")", "if", "response", ".", "status_code", "==", "200", ":", "return", "StringIO", "(", "response", ".", "text", ")", "else", ":", "return",...	28.375	12.375
def merge_featurecollection(*jsons): """ merge features into one featurecollection Keyword arguments: jsons -- jsons object list return geojson featurecollection """ features = [] for json in jsons: if json['type'] == 'FeatureCollection': for feature in json['fea...	[ "def", "merge_featurecollection", "(", "*", "jsons", ")", ":", "features", "=", "[", "]", "for", "json", "in", "jsons", ":", "if", "json", "[", "'type'", "]", "==", "'FeatureCollection'", ":", "for", "feature", "in", "json", "[", "'features'", "]", ":", ...	27.733333	12.666667
def _R2deriv(self,R,z,phi=0.,t=0.): """ NAME: _Rderiv PURPOSE: evaluate the second radial derivative for this potential INPUT: R - Galactocentric cylindrical radius z - vertical height phi - azimuth t - time OUTPUT...	[ "def", "_R2deriv", "(", "self", ",", "R", ",", "z", ",", "phi", "=", "0.", ",", "t", "=", "0.", ")", ":", "r2", "=", "R", "", "2.", "+", "z", "", "2.", "rb", "=", "nu", ".", "sqrt", "(", "r2", "+", "self", ".", "b2", ")", "return", ...	29.15	15.35
def probConn (self, preCellsTags, postCellsTags, connParam): from .. import sim ''' Generates connections between all pre and post-syn cells based on probability values''' if sim.cfg.verbose: print('Generating set of probabilistic connections (rule: %s) ...' % (connParam['label'])) allRands = self.gen...	[ "def", "probConn", "(", "self", ",", "preCellsTags", ",", "postCellsTags", ",", "connParam", ")", ":", "from", ".", ".", "import", "sim", "if", "sim", ".", "cfg", ".", "verbose", ":", "print", "(", "'Generating set of probabilistic connections (rule: %s) ...'", ...	76.020408	51.44898
def set_schedule(self, schedule): """Takes the output from `auto` and sets the attributes """ self.Tmax = schedule['tmax'] self.Tmin = schedule['tmin'] self.steps = int(schedule['steps']) self.updates = int(schedule['updates'])	[ "def", "set_schedule", "(", "self", ",", "schedule", ")", ":", "self", ".", "Tmax", "=", "schedule", "[", "'tmax'", "]", "self", ".", "Tmin", "=", "schedule", "[", "'tmin'", "]", "self", ".", "steps", "=", "int", "(", "schedule", "[", "'steps'", "]",...	38.428571	3.571429
def cumulative_statistics(self): """ Access the cumulative_statistics :returns: twilio.rest.taskrouter.v1.workspace.worker.workers_cumulative_statistics.WorkersCumulativeStatisticsList :rtype: twilio.rest.taskrouter.v1.workspace.worker.workers_cumulative_statistics.WorkersCumulativeStat...	[ "def", "cumulative_statistics", "(", "self", ")", ":", "if", "self", ".", "_cumulative_statistics", "is", "None", ":", "self", ".", "_cumulative_statistics", "=", "WorkersCumulativeStatisticsList", "(", "self", ".", "_version", ",", "workspace_sid", "=", "self", "...	46.461538	24
def find_cards(self, source=None, **filters): """ Generate a card pool with all cards matching specified filters """ if not filters: new_filters = self.filters.copy() else: new_filters = filters.copy() for k, v in new_filters.items(): if isinstance(v, LazyValue): new_filters[k] = v.evaluate(so...	[ "def", "find_cards", "(", "self", ",", "source", "=", "None", ",", "", "", "filters", ")", ":", "if", "not", "filters", ":", "new_filters", "=", "self", ".", "filters", ".", "copy", "(", ")", "else", ":", "new_filters", "=", "filters", ".", "copy",...	24.8	14.4
async def dist(self, mesg): ''' Distribute an existing event tuple. Args: mesg ((str,dict)): An event tuple. Example: await base.dist( ('foo',{'bar':'baz'}) ) ''' if self.isfini: return () ret = [] for func in self...	[ "async", "def", "dist", "(", "self", ",", "mesg", ")", ":", "if", "self", ".", "isfini", ":", "return", "(", ")", "ret", "=", "[", "]", "for", "func", "in", "self", ".", "_syn_funcs", ".", "get", "(", "mesg", "[", "0", "]", ",", "(", ")", ")"...	25.088235	22.5
def track_field(field): """ Returns whether the given field should be tracked by Auditlog. Untracked fields are many-to-many relations and relations to the Auditlog LogEntry model. :param field: The field to check. :type field: Field :return: Whether the given field should be tracked. :rty...	[ "def", "track_field", "(", "field", ")", ":", "from", "auditlog", ".", "models", "import", "LogEntry", "# Do not track many to many relations", "if", "field", ".", "many_to_many", ":", "return", "False", "# Do not track relations to LogEntry", "if", "getattr", "(", "f...	29.52	23.04
def mark(self, channel_name, ts): """ https://api.slack.com/methods/channels.mark """ channel_id = self.get_channel_id(channel_name) self.params.update({ 'channel': channel_id, 'ts': ts, }) return FromUrl('https://slack.com/api/channels....	[ "def", "mark", "(", "self", ",", "channel_name", ",", "ts", ")", ":", "channel_id", "=", "self", ".", "get_channel_id", "(", "channel_name", ")", "self", ".", "params", ".", "update", "(", "{", "'channel'", ":", "channel_id", ",", "'ts'", ":", "ts", ",...	39.888889	15.444444

def entry_set(self, predicate=None): """ Returns a list clone of the mappings contained in this map. **Warning: The list is NOT backed by the map, so changes to the map are NOT reflected in the list, and vice-versa.** :param predicate: (Predicate), predicate for the map to filt...

[ "def", "entry_set", "(", "self", ",", "predicate", "=", "None", ")", ":", "if", "predicate", ":", "predicate_data", "=", "self", ".", "_to_data", "(", "predicate", ")", "return", "self", ".", "_encode_invoke", "(", "map_entries_with_predicate_codec", ",", "pre...

45

31

def _set_fcoe_fip_advertisement(self, v, load=False): """ Setter method for fcoe_fip_advertisement, mapped from YANG variable /fcoe/fcoe_fabric_map/fcoe_fip_advertisement (container) If this variable is read-only (config: false) in the source YANG file, then _set_fcoe_fip_advertisement is considered as ...

[ "def", "_set_fcoe_fip_advertisement", "(", "self", ",", "v", ",", "load", "=", "False", ")", ":", "if", "hasattr", "(", "v", ",", "\"_utype\"", ")", ":", "v", "=", "v", ".", "_utype", "(", "v", ")", "try", ":", "t", "=", "YANGDynClass", "(", "v", ...

79.56

40.12

def cast_problem(problem): """ Casts problem object with known interface as OptProblem. Parameters ---------- problem : Object """ # Optproblem if isinstance(problem,OptProblem): return problem # Other else: # Type Base if (not hasattr(...

[ "def", "cast_problem", "(", "problem", ")", ":", "# Optproblem", "if", "isinstance", "(", "problem", ",", "OptProblem", ")", ":", "return", "problem", "# Other", "else", ":", "# Type Base", "if", "(", "not", "hasattr", "(", "problem", ",", "'G'", ")", "or"...

24.740741

20.222222

def on_view_change_start(self): """ Notifies node about the fact that view changed to let it prepare for election """ self.view_changer.start_view_change_ts = self.utc_epoch() for replica in self.replicas.values(): replica.on_view_change_start() logge...

[ "def", "on_view_change_start", "(", "self", ")", ":", "self", ".", "view_changer", ".", "start_view_change_ts", "=", "self", ".", "utc_epoch", "(", ")", "for", "replica", "in", "self", ".", "replicas", ".", "values", "(", ")", ":", "replica", ".", "on_view...

43.419355

21.935484

def kudos(self): """ :class:`list` of :class:`stravalib.model.ActivityKudos` objects for this activity. """ if self._kudos is None: self.assert_bind_client() self._kudos = self.bind_client.get_activity_kudos(self.id) return self._kudos

[ "def", "kudos", "(", "self", ")", ":", "if", "self", ".", "_kudos", "is", "None", ":", "self", ".", "assert_bind_client", "(", ")", "self", ".", "_kudos", "=", "self", ".", "bind_client", ".", "get_activity_kudos", "(", "self", ".", "id", ")", "return"...

36.5

16.25

def prepare(host, default_protocol='telnet', **kwargs): """ Creates an instance of the protocol by either parsing the given URL-formatted hostname using :class:`Exscript.util.url`, or according to the options of the given :class:`Exscript.Host`. :type host: str or Host :param host: A URL-forma...

[ "def", "prepare", "(", "host", ",", "default_protocol", "=", "'telnet'", ",", "*", "*", "kwargs", ")", ":", "host", "=", "to_host", "(", "host", ",", "default_protocol", "=", "default_protocol", ")", "protocol", "=", "host", ".", "get_protocol", "(", ")", ...

40.454545

16.363636

def Read(self): """See base class.""" buf = ctypes.create_string_buffer(self.desc.internal_max_in_report_len) num_read = wintypes.DWORD() ret = kernel32.ReadFile( self.dev, buf, len(buf), ctypes.byref(num_read), None) if num_read.value != self.desc.internal_max_in_report_len: raise er...

[ "def", "Read", "(", "self", ")", ":", "buf", "=", "ctypes", ".", "create_string_buffer", "(", "self", ".", "desc", ".", "internal_max_in_report_len", ")", "num_read", "=", "wintypes", ".", "DWORD", "(", ")", "ret", "=", "kernel32", ".", "ReadFile", "(", ...

37

23.8125

def make_citation_dict(td): """ Update a citation dictionary by editing the Author field :param td: A BixTex format citation dict or a term :return: """ from datetime import datetime if isinstance(td, dict): d = td name = d['name_link'] else: d = td.as_dict() ...

[ "def", "make_citation_dict", "(", "td", ")", ":", "from", "datetime", "import", "datetime", "if", "isinstance", "(", "td", ",", "dict", ")", ":", "d", "=", "td", "name", "=", "d", "[", "'name_link'", "]", "else", ":", "d", "=", "td", ".", "as_dict", ...

25.463768

21.289855

def create_project(self, project_name, dataset_name, hostname, is_public, s3backend=0, kvserver='localhost', kvengine='MySQL', mdengine=...

[ "def", "create_project", "(", "self", ",", "project_name", ",", "dataset_name", ",", "hostname", ",", "is_public", ",", "s3backend", "=", "0", ",", "kvserver", "=", "'localhost'", ",", "kvengine", "=", "'MySQL'", ",", "mdengine", "=", "'MySQL'", ",", "descri...

34.26

15.66

def get_cache_key(path): """ Create a cache key by concatenating the prefix with a hash of the path. """ # Python 2/3 support for path hashing try: path_hash = hashlib.md5(path).hexdigest() except TypeError: path_hash = hashlib.md5(path.encode('utf-8')).hexdigest() return set...

[ "def", "get_cache_key", "(", "path", ")", ":", "# Python 2/3 support for path hashing", "try", ":", "path_hash", "=", "hashlib", ".", "md5", "(", "path", ")", ".", "hexdigest", "(", ")", "except", "TypeError", ":", "path_hash", "=", "hashlib", ".", "md5", "(...

34.5

14.5

def traceroute_batch(input_list, results={}, method="udp", cmd_arguments=None, delay_time=0.1, max_threads=100): """ This is a parallel version of the traceroute primitive. :param input_list: the input is a list of domain names :param method: the packet type used for traceroute, UD...

[ "def", "traceroute_batch", "(", "input_list", ",", "results", "=", "{", "}", ",", "method", "=", "\"udp\"", ",", "cmd_arguments", "=", "None", ",", "delay_time", "=", "0.1", ",", "max_threads", "=", "100", ")", ":", "threads", "=", "[", "]", "thread_erro...

36.716667

20.883333

def text_dict_write(fpath, dict_): """ Very naive, but readable way of storing a dictionary on disk FIXME: This broke on RoseMary's big dataset. Not sure why. It gave bad syntax. And the SyntaxError did not seem to be excepted. """ #dict_ = text_dict_read(fpath) #dict_[key] = val dict_te...

[ "def", "text_dict_write", "(", "fpath", ",", "dict_", ")", ":", "#dict_ = text_dict_read(fpath)", "#dict_[key] = val", "dict_text2", "=", "util_str", ".", "repr4", "(", "dict_", ",", "strvals", "=", "False", ")", "if", "VERBOSE", ":", "print", "(", "'[cache] '",...

37.583333

12.583333

def write_edges( edges: Mapping[str, Any], filename: str, jsonlines: bool = False, gzipflag: bool = False, yaml: bool = False, ): """Write edges to file Args: edges (Mapping[str, Any]): in edges JSON Schema format filename (str): filename to write jsonlines (bool): o...

[ "def", "write_edges", "(", "edges", ":", "Mapping", "[", "str", ",", "Any", "]", ",", "filename", ":", "str", ",", "jsonlines", ":", "bool", "=", "False", ",", "gzipflag", ":", "bool", "=", "False", ",", "yaml", ":", "bool", "=", "False", ",", ")",...

25.411765

16.647059

def process_raw_data(cls, raw_data): """Create a new model using raw API response.""" properties = raw_data["properties"] qos_settings = properties.get("qosSettings", {}) properties["qosSettings"] = VirtualSwtichQosSettings.from_raw_data( raw_data=qos_settings) return...

[ "def", "process_raw_data", "(", "cls", ",", "raw_data", ")", ":", "properties", "=", "raw_data", "[", "\"properties\"", "]", "qos_settings", "=", "properties", ".", "get", "(", "\"qosSettings\"", ",", "{", "}", ")", "properties", "[", "\"qosSettings\"", "]", ...

53.428571

14

def _recv_callback(self, msg): """ Method is called when there is a message coming from a Mongrel2 server. This message should be a valid Request String. """ m2req = MongrelRequest.parse(msg[0]) MongrelConnection(m2req, self._sending_stream, self.request_callback, ...

[ "def", "_recv_callback", "(", "self", ",", "msg", ")", ":", "m2req", "=", "MongrelRequest", ".", "parse", "(", "msg", "[", "0", "]", ")", "MongrelConnection", "(", "m2req", ",", "self", ".", "_sending_stream", ",", "self", ".", "request_callback", ",", "...

46.875

16.625

def _start_ubridge_capture(self, adapter_number, output_file): """ Start a packet capture in uBridge. :param adapter_number: adapter number :param output_file: PCAP destination file for the capture """ adapter = "bridge{}".format(adapter_number) if not self.ubri...

[ "def", "_start_ubridge_capture", "(", "self", ",", "adapter_number", ",", "output_file", ")", ":", "adapter", "=", "\"bridge{}\"", ".", "format", "(", "adapter_number", ")", "if", "not", "self", ".", "ubridge", ":", "raise", "DockerError", "(", "\"Cannot start t...

44.416667

24.583333

def limits(self, value, square=False): """TODO: doc + server side implementation""" if isinstance(value, six.string_types): import re match = re.match(r"(\d*)(\D*)", value) if match is None: raise ValueError("do not understand limit specifier %r, examp...

[ "def", "limits", "(", "self", ",", "value", ",", "square", "=", "False", ")", ":", "if", "isinstance", "(", "value", ",", "six", ".", "string_types", ")", ":", "import", "re", "match", "=", "re", ".", "match", "(", "r\"(\\d*)(\\D*)\"", ",", "value", ...

44.375

14.875

def dump_jwks(kbl, target, private=False): """ Write a JWK to a file. Will ignore symmetric keys !! :param kbl: List of KeyBundles :param target: Name of the file to which everything should be written :param private: Should also the private parts be exported """ keys = [] for kb in kbl...

[ "def", "dump_jwks", "(", "kbl", ",", "target", ",", "private", "=", "False", ")", ":", "keys", "=", "[", "]", "for", "kb", "in", "kbl", ":", "keys", ".", "extend", "(", "[", "k", ".", "serialize", "(", "private", ")", "for", "k", "in", "kb", "....

26.8

20.24

def list(self, argv): """List all current search jobs if no jobs specified, otherwise list the properties of the specified jobs.""" def read(job): for key in sorted(job.content.keys()): # Ignore some fields that make the output hard to read and # t...

[ "def", "list", "(", "self", ",", "argv", ")", ":", "def", "read", "(", "job", ")", ":", "for", "key", "in", "sorted", "(", "job", ".", "content", ".", "keys", "(", ")", ")", ":", "# Ignore some fields that make the output hard to read and", "# that are avail...

35.473684

17.631579

def slice_slice(old_slice, applied_slice, size): """Given a slice and the size of the dimension to which it will be applied, index it with another slice to return a new slice equivalent to applying the slices sequentially """ step = (old_slice.step or 1) * (applied_slice.step or 1) # For now, u...

[ "def", "slice_slice", "(", "old_slice", ",", "applied_slice", ",", "size", ")", ":", "step", "=", "(", "old_slice", ".", "step", "or", "1", ")", "*", "(", "applied_slice", ".", "step", "or", "1", ")", "# For now, use the hack of turning old_slice into an ndarray...

39

19.4

def is_url(text): """ Check if the given text looks like a URL. """ if text is None: return False text = text.lower() return text.startswith('http://') or text.startswith('https://') or \ text.startswith('urn:') or text.startswith('file://')

[ "def", "is_url", "(", "text", ")", ":", "if", "text", "is", "None", ":", "return", "False", "text", "=", "text", ".", "lower", "(", ")", "return", "text", ".", "startswith", "(", "'http://'", ")", "or", "text", ".", "startswith", "(", "'https://'", "...

38.142857

19.142857

def send_message(frm=None, to=None, text=None): """Shortcut to send a sms using libnexmo api. :param frm: The originator of the message :param to: The message's recipient :param text: The text message body Example usage: >>> send_message(to='+33123456789', text='My sms message body') """...

[ "def", "send_message", "(", "frm", "=", "None", ",", "to", "=", "None", ",", "text", "=", "None", ")", ":", "assert", "to", "is", "not", "None", "assert", "text", "is", "not", "None", "if", "frm", "is", "None", ":", "frm", "=", "settings", ".", "...

25.04

20.96

def get_confidence(self): """return confidence based on existing data""" # if we didn't receive any character in our consideration range, # return negative answer if self._mTotalChars <= 0 or self._mFreqChars <= MINIMUM_DATA_THRESHOLD: return SURE_NO if self._mTotalC...

[ "def", "get_confidence", "(", "self", ")", ":", "# if we didn't receive any character in our consideration range,", "# return negative answer", "if", "self", ".", "_mTotalChars", "<=", "0", "or", "self", ".", "_mFreqChars", "<=", "MINIMUM_DATA_THRESHOLD", ":", "return", "...

40.133333

20.8

def to_safe_str(s): """ converts some (tr) non-ascii chars to ascii counterparts, then return the result as lowercase """ # TODO: This is insufficient as it doesn't do anything for other non-ascii chars return re.sub(r'[^0-9a-zA-Z]+', '_', s.strip().replace(u'ğ', 'g').replace(u'ö', 'o').replace(...

[ "def", "to_safe_str", "(", "s", ")", ":", "# TODO: This is insufficient as it doesn't do anything for other non-ascii chars", "return", "re", ".", "sub", "(", "r'[^0-9a-zA-Z]+'", ",", "'_'", ",", "s", ".", "strip", "(", ")", ".", "replace", "(", "u'ğ',", " ", "g')...

55.8

26.8

def _build_loop(self, lexer): """Build saveframe loop. :param lexer: instance of lexical analyzer. :type lexer: :func:`~nmrstarlib.bmrblex.bmrblex` :return: Fields and values of the loop. :rtype: :py:class:`tuple` """ fields = [] values = [] toke...

[ "def", "_build_loop", "(", "self", ",", "lexer", ")", ":", "fields", "=", "[", "]", "values", "=", "[", "]", "token", "=", "next", "(", "lexer", ")", "while", "token", "[", "0", "]", "==", "u\"_\"", ":", "fields", ".", "append", "(", "token", "["...

32.64

20.6

def _add_disease_association_attributes(self, att_ind_start, att_mappings): """Add disease association information to the attribute mapping dictionary. :param int att_ind_start: Start index for enumerating the attributes. :param dict att_mappings: Dictionary of mappings between vertices and enu...

[ "def", "_add_disease_association_attributes", "(", "self", ",", "att_ind_start", ",", "att_mappings", ")", ":", "disease_mappings", "=", "self", ".", "get_disease_mappings", "(", "att_ind_start", ")", "for", "vertex", "in", "self", ".", "graph", ".", "vs", ":", ...

59.166667

25.333333

def onSelect_specimen(self, event): """ update figures and text when a new specimen is selected """ self.selected_meas = [] self.select_specimen(str(self.specimens_box.GetValue())) if self.ie_open: self.ie.change_selected(self.current_fit) self.update_...

[ "def", "onSelect_specimen", "(", "self", ",", "event", ")", ":", "self", ".", "selected_meas", "=", "[", "]", "self", ".", "select_specimen", "(", "str", "(", "self", ".", "specimens_box", ".", "GetValue", "(", ")", ")", ")", "if", "self", ".", "ie_ope...

35.888889

11

def handle(client_message, handle_event_member=None, handle_event_member_list=None, handle_event_member_attribute_change=None, to_object=None): """ Event handler """ message_type = client_message.get_message_type() if message_type == EVENT_MEMBER and handle_event_member is not None: member = MemberC...

[ "def", "handle", "(", "client_message", ",", "handle_event_member", "=", "None", ",", "handle_event_member_list", "=", "None", ",", "handle_event_member_attribute_change", "=", "None", ",", "to_object", "=", "None", ")", ":", "message_type", "=", "client_message", "...

57.409091

21.818182

def model(self, voltages=True, sensitivities=False, potentials=False, output_directory=None, silent=False, ): """Forward model the tomodir and read in the results """ self._check_state() if self.can_model...

[ "def", "model", "(", "self", ",", "voltages", "=", "True", ",", "sensitivities", "=", "False", ",", "potentials", "=", "False", ",", "output_directory", "=", "None", ",", "silent", "=", "False", ",", ")", ":", "self", ".", "_check_state", "(", ")", "if...

36.694444

16.333333

def fix_queue_critical(self): """ This function tries to fix critical events originating from the queue submission system. Returns the number of tasks that have been fixed. """ count = 0 for task in self.iflat_tasks(status=self.S_QCRITICAL): logger.info("Will...

[ "def", "fix_queue_critical", "(", "self", ")", ":", "count", "=", "0", "for", "task", "in", "self", ".", "iflat_tasks", "(", "status", "=", "self", ".", "S_QCRITICAL", ")", ":", "logger", ".", "info", "(", "\"Will try to fix task %s\"", "%", "str", "(", ...

34.8125

19.9375

def get_bgcolor(self, index): """Background color depending on value""" value = self.get_value(index) if index.column() < 3: color = ReadOnlyCollectionsModel.get_bgcolor(self, index) else: if self.remote: color_name = value['color'] ...

[ "def", "get_bgcolor", "(", "self", ",", "index", ")", ":", "value", "=", "self", ".", "get_value", "(", "index", ")", "if", "index", ".", "column", "(", ")", "<", "3", ":", "color", "=", "ReadOnlyCollectionsModel", ".", "get_bgcolor", "(", "self", ",",...

35.769231

11.923077

def set_scenario_status(scenario_id, status, **kwargs): """ Set the status of a scenario. """ user_id = kwargs.get('user_id') _check_can_edit_scenario(scenario_id, kwargs['user_id']) scenario_i = _get_scenario(scenario_id, user_id) scenario_i.status = status db.DBSession.flush() ...

[ "def", "set_scenario_status", "(", "scenario_id", ",", "status", ",", "*", "*", "kwargs", ")", ":", "user_id", "=", "kwargs", ".", "get", "(", "'user_id'", ")", "_check_can_edit_scenario", "(", "scenario_id", ",", "kwargs", "[", "'user_id'", "]", ")", "scena...

23

19

def remove_bookmark(self, time): """User removes bookmark. Parameters ---------- time : tuple of float start and end of the new bookmark, in s """ self.annot.remove_bookmark(time=time) self.update_annotations()

[ "def", "remove_bookmark", "(", "self", ",", "time", ")", ":", "self", ".", "annot", ".", "remove_bookmark", "(", "time", "=", "time", ")", "self", ".", "update_annotations", "(", ")" ]

27

12.6

def get_params(self, pnames=None): """ Return a list of Parameter objects Parameters ---------- pname : list or None If a list get the Parameter objects with those names If none, get all the Parameter objects Returns ------- params : lis...

[ "def", "get_params", "(", "self", ",", "pnames", "=", "None", ")", ":", "l", "=", "[", "]", "if", "pnames", "is", "None", ":", "pnames", "=", "self", ".", "params", ".", "keys", "(", ")", "for", "pname", "in", "pnames", ":", "p", "=", "self", "...

22

19.576923

def scale2x(self, surface): """ Scales using the AdvanceMAME Scale2X algorithm which does a 'jaggie-less' scale of bitmap graphics. """ assert(self._scale == 2) return self._pygame.transform.scale2x(surface)

[ "def", "scale2x", "(", "self", ",", "surface", ")", ":", "assert", "(", "self", ".", "_scale", "==", "2", ")", "return", "self", ".", "_pygame", ".", "transform", ".", "scale2x", "(", "surface", ")" ]

35.571429

9.857143

def handle_user(self, params): """ Handle the USER command which identifies the user to the server. """ params = params.split(' ', 3) if len(params) != 4: raise IRCError.from_name( 'needmoreparams', 'USER :Not enough parameters') ...

[ "def", "handle_user", "(", "self", ",", "params", ")", ":", "params", "=", "params", ".", "split", "(", "' '", ",", "3", ")", "if", "len", "(", "params", ")", "!=", "4", ":", "raise", "IRCError", ".", "from_name", "(", "'needmoreparams'", ",", "'USER...

27.9375

13.8125

def _get_parser(self, env): """ Creates base argument parser. `env` Runtime ``Environment`` instance. * Raises ``HelpBanner`` exception when certain conditions apply. Returns ``FocusArgumentParser`` object. """ version_str = 'focus vers...

[ "def", "_get_parser", "(", "self", ",", "env", ")", ":", "version_str", "=", "'focus version '", "+", "__version__", "usage_str", "=", "'focus [-h] [-v] [--no-color] <command> [<args>]'", "# setup parser", "parser", "=", "FocusArgParser", "(", "description", "=", "(", ...

39

23.202899

def correlation_matrix(nums_with_uncert): """ Calculate the correlation matrix of uncertain variables, oriented by the order of the inputs Parameters ---------- nums_with_uncert : array-like A list of variables that have an associated uncertainty Returns ------- cor...

[ "def", "correlation_matrix", "(", "nums_with_uncert", ")", ":", "ufuncs", "=", "list", "(", "map", "(", "to_uncertain_func", ",", "nums_with_uncert", ")", ")", "data", "=", "np", ".", "vstack", "(", "[", "ufunc", ".", "_mcpts", "for", "ufunc", "in", "ufunc...

27.533333

18.533333

def enabled(name='allprofiles'): ''' Enable all the firewall profiles (Windows only) Args: profile (Optional[str]): The name of the profile to enable. Default is ``allprofiles``. Valid options are: - allprofiles - domainprofile - privateprofile ...

[ "def", "enabled", "(", "name", "=", "'allprofiles'", ")", ":", "ret", "=", "{", "'name'", ":", "name", ",", "'result'", ":", "True", ",", "'changes'", ":", "{", "}", ",", "'comment'", ":", "''", "}", "profile_map", "=", "{", "'domainprofile'", ":", "...

29.162162

20.27027

def parse_directives(lexer: Lexer, is_const: bool) -> List[DirectiveNode]: """Directives[Const]: Directive[?Const]+""" directives: List[DirectiveNode] = [] append = directives.append while peek(lexer, TokenKind.AT): append(parse_directive(lexer, is_const)) return directives

[ "def", "parse_directives", "(", "lexer", ":", "Lexer", ",", "is_const", ":", "bool", ")", "->", "List", "[", "DirectiveNode", "]", ":", "directives", ":", "List", "[", "DirectiveNode", "]", "=", "[", "]", "append", "=", "directives", ".", "append", "whil...

42.285714

10.714286

def rows_from_csv(filename, predicate=None, encoding='utf-8'): """\ Returns an iterator over all rows in the provided CSV `filename`. `filename` Absolute path to a file to read the cables from. The file must be a CSV file with the following columns: <identifier>, <creation-date>, <r...

[ "def", "rows_from_csv", "(", "filename", ",", "predicate", "=", "None", ",", "encoding", "=", "'utf-8'", ")", ":", "pred", "=", "predicate", "or", "bool", "with", "open", "(", "filename", ",", "'rb'", ")", "as", "f", ":", "for", "row", "in", "_UnicodeR...

55.625

29.5

def consume_asset(event, agreement_id, did, service_agreement, consumer_account, consume_callback): """ Consumption of an asset after get the event call. :param event: AttributeDict with the event data. :param agreement_id: id of the agreement, hex str :param did: DID, str :param service_agreem...

[ "def", "consume_asset", "(", "event", ",", "agreement_id", ",", "did", ",", "service_agreement", ",", "consumer_account", ",", "consume_callback", ")", ":", "logger", ".", "debug", "(", "f\"consuming asset after event {event}.\"", ")", "if", "consume_callback", ":", ...

37.714286

19

def _store_compressed_sequence_to_node(self, node): """ make a compressed representation of a pair of sequences only counting the number of times a particular pair of states (e.g. (A,T)) is observed the the aligned sequences of parent and child. Parameters ----------- ...

[ "def", "_store_compressed_sequence_to_node", "(", "self", ",", "node", ")", ":", "seq_pairs", ",", "multiplicity", "=", "self", ".", "gtr", ".", "compress_sequence_pair", "(", "node", ".", "up", ".", "cseq", ",", "node", ".", "cseq", ",", "pattern_multiplicity...

46.5

26.6

def coords_from_query(query): """Transform a query line into a (lng, lat) pair of coordinates.""" try: coords = json.loads(query) except ValueError: query = query.replace(',', ' ') vals = query.split() coords = [float(v) for v in vals] return tuple(coords[:2])

[ "def", "coords_from_query", "(", "query", ")", ":", "try", ":", "coords", "=", "json", ".", "loads", "(", "query", ")", "except", "ValueError", ":", "query", "=", "query", ".", "replace", "(", "','", ",", "' '", ")", "vals", "=", "query", ".", "split...

33.333333

10.333333

def _remove_hidden_parts(projected_surface): """Removes parts of a projected surface that are not visible. Args: projected_surface (surface): the surface to use Returns: surface: A projected surface. """ surface = np.copy(projected_surface) surface[~_make_occlusion_mask(project...

[ "def", "_remove_hidden_parts", "(", "projected_surface", ")", ":", "surface", "=", "np", ".", "copy", "(", "projected_surface", ")", "surface", "[", "~", "_make_occlusion_mask", "(", "projected_surface", ")", "]", "=", "np", ".", "nan", "return", "surface" ]

29.083333

17.083333

def main(): '''Calculate the depth of a liquid in centimeters using a HCSR04 sensor and a Raspberry Pi''' trig_pin = 17 echo_pin = 27 # Default values # unit = 'metric' # temperature = 20 # round_to = 1 hole_depth = 80 # centimeters # Create a distance reading with the hc...

[ "def", "main", "(", ")", ":", "trig_pin", "=", "17", "echo_pin", "=", "27", "# Default values", "# unit = 'metric'", "# temperature = 20", "# round_to = 1", "hole_depth", "=", "80", "# centimeters", "# Create a distance reading with the hcsr04 sensor module", "value", "=", ...

29.030303

21.151515

def flag(name=None): """ Creates the grammar for a Flag (F) field, accepting only 'Y', 'N' or 'U'. :param name: name for the field :return: grammar for the flag field """ if name is None: name = 'Flag Field' # Basic field field = pp.Regex('[YNU]') # Name field.setName...

[ "def", "flag", "(", "name", "=", "None", ")", ":", "if", "name", "is", "None", ":", "name", "=", "'Flag Field'", "# Basic field", "field", "=", "pp", ".", "Regex", "(", "'[YNU]'", ")", "# Name", "field", ".", "setName", "(", "name", ")", "field", "."...

17.7

22.7

def clear(self, username, project): """Clear the cache for given project.""" method = 'DELETE' url = ('/project/{username}/{project}/build-cache?' 'circle-token={token}'.format(username=username, project=project, ...

[ "def", "clear", "(", "self", ",", "username", ",", "project", ")", ":", "method", "=", "'DELETE'", "url", "=", "(", "'/project/{username}/{project}/build-cache?'", "'circle-token={token}'", ".", "format", "(", "username", "=", "username", ",", "project", "=", "p...

49

16.111111

def get(self, community_id): """Get the details of the specified community. .. http:get:: /communities/(string:id) Returns a JSON dictionary with the details of the specified community. **Request**: .. sourcecode:: http GET /communities/co...

[ "def", "get", "(", "self", ",", "community_id", ")", ":", "community", "=", "Community", ".", "get", "(", "community_id", ")", "if", "not", "community", ":", "abort", "(", "404", ")", "etag", "=", "community", ".", "version_id", "self", ".", "check_etag"...

36.209302

12.046512

def get_schema_input_version(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") get_schema = ET.Element("get_schema") config = get_schema input = ET.SubElement(get_schema, "input") version = ET.SubElement(input, "version") version.te...

[ "def", "get_schema_input_version", "(", "self", ",", "*", "*", "kwargs", ")", ":", "config", "=", "ET", ".", "Element", "(", "\"config\"", ")", "get_schema", "=", "ET", ".", "Element", "(", "\"get_schema\"", ")", "config", "=", "get_schema", "input", "=", ...

35.5

9.583333

def get_all(symbol): """ Get all available quote data for the given ticker symbol. Returns a dictionary. """ ids = \ 'ydb2r1b3qpoc1d1cd2c6t1k2p2c8m5c3m6gm7hm8k1m3lm4l1t8w1g1w4g3p' \ '1g4mg5m2g6kvjj1j5j3k4f6j6nk5n4ws1xj2va5b6k3t7a2t615l2el3e7v1' \ 'e8v7e9s6b4j4p5p6rr2r5r6r7s7...

[ "def", "get_all", "(", "symbol", ")", ":", "ids", "=", "'ydb2r1b3qpoc1d1cd2c6t1k2p2c8m5c3m6gm7hm8k1m3lm4l1t8w1g1w4g3p'", "'1g4mg5m2g6kvjj1j5j3k4f6j6nk5n4ws1xj2va5b6k3t7a2t615l2el3e7v1'", "'e8v7e9s6b4j4p5p6rr2r5r6r7s7'", "values", "=", "_request", "(", "symbol", ",", "ids", ")", ...

34.468085

8.914894

def is_closed(self) -> Optional[bool]: """For Magnet Sensor; True if Closed, False if Open.""" if self._device_type is not None and self._device_type == DeviceType.DoorMagnet: return bool(self._current_status & 0x01) return None

[ "def", "is_closed", "(", "self", ")", "->", "Optional", "[", "bool", "]", ":", "if", "self", ".", "_device_type", "is", "not", "None", "and", "self", ".", "_device_type", "==", "DeviceType", ".", "DoorMagnet", ":", "return", "bool", "(", "self", ".", "...

52

16.6

def _create_skeleton_3(pc, l, num_section): """ Bottom level: {"measurement": [], "model": [{summary, distributions, ensemble}]} Fill in measurement and model tables with N number of EMPTY meas, summary, ensemble, and distributions. :param str pc: Paleo or Chron "mode" :param list l: :param dict...

[ "def", "_create_skeleton_3", "(", "pc", ",", "l", ",", "num_section", ")", ":", "logger_excel", ".", "info", "(", "\"enter create_skeleton_inner_2\"", ")", "# Table Template: Model", "template_model", "=", "{", "\"summaryTable\"", ":", "{", "}", ",", "\"ensembleTabl...

43.636364

26.227273

def emg_tkeo(emg): """ Calculates the Teager–Kaiser Energy operator. Parameters ---------- emg : array raw EMG signal. Returns ------- tkeo : 1D array_like signal processed by the Teager–Kaiser Energy operator. Notes ----- *Authors* - Marcos Duarte ...

[ "def", "emg_tkeo", "(", "emg", ")", ":", "emg", "=", "np", ".", "asarray", "(", "emg", ")", "tkeo", "=", "np", ".", "copy", "(", "emg", ")", "# Teager–Kaiser Energy operator", "tkeo", "[", "1", ":", "-", "1", "]", "=", "emg", "[", "1", ":", "-", ...

17.375

25.625

def OnActivateCard(self, card): """Called when a card is activated by double-clicking on the card or reader tree control or toolbar. In this sample, we just connect to the card on the first activation.""" SimpleSCardAppEventObserver.OnActivateCard(self, card) self.feedbacktext.Se...

[ "def", "OnActivateCard", "(", "self", ",", "card", ")", ":", "SimpleSCardAppEventObserver", ".", "OnActivateCard", "(", "self", ",", "card", ")", "self", ".", "feedbacktext", ".", "SetLabel", "(", "'Activated card: '", "+", "repr", "(", "card", ")", ")", "se...

55.714286

10.857143

def predict_topk(self, dataset, output_type="probability", k=3, batch_size=64): """ Return top-k predictions for the ``dataset``, using the trained model. Predictions are returned as an SFrame with three columns: `id`, `class`, and `probability`, `margin`, or `rank`, depending on the ``...

[ "def", "predict_topk", "(", "self", ",", "dataset", ",", "output_type", "=", "\"probability\"", ",", "k", "=", "3", ",", "batch_size", "=", "64", ")", ":", "if", "not", "isinstance", "(", "dataset", ",", "(", "_tc", ".", "SFrame", ",", "_tc", ".", "S...

40.875

21.75

def backup(host=None, core_name=None, append_core_to_path=False): ''' Tell solr make a backup. This method can be mis-leading since it uses the backup API. If an error happens during the backup you are not notified. The status: 'OK' in the response simply means that solr received the request succe...

[ "def", "backup", "(", "host", "=", "None", ",", "core_name", "=", "None", ",", "append_core_to_path", "=", "False", ")", ":", "path", "=", "__opts__", "[", "'solr.backup_path'", "]", "num_backups", "=", "__opts__", "[", "'solr.num_backups'", "]", "if", "path...

39.084746

20.983051

def plot_zed(ZED, datablock, angle, s, units): """ function to make equal area plot and zijderveld plot Parameters _________ ZED : dictionary with keys for plots eqarea : figure number for equal area projection zijd : figure number for zijderveld plot demag : figure numb...

[ "def", "plot_zed", "(", "ZED", ",", "datablock", ",", "angle", ",", "s", ",", "units", ")", ":", "for", "fignum", "in", "list", "(", "ZED", ".", "keys", "(", ")", ")", ":", "fig", "=", "plt", ".", "figure", "(", "num", "=", "ZED", "[", "fignum"...

35.957746

18.43662

def _addSexSpecificity(self, subject_id, sex): """ Add sex specificity to a subject (eg association node) In our modeling we use this to add a qualifier to a triple for example, this genotype to phenotype association is specific to this sex (see MGI, IMPC) This expects ...

[ "def", "_addSexSpecificity", "(", "self", ",", "subject_id", ",", "sex", ")", ":", "self", ".", "graph", ".", "addTriple", "(", "subject_id", ",", "self", ".", "globaltt", "[", "'has_sex_specificty'", "]", ",", "sex", ")" ]

36.333333

21.111111

def execute(self, *args, **kwargs): """ Initializes and runs the tool. This is shorhand to parse command line arguments, then calling: self.setup(parsed_arguments) self.process() """ args = self.parser.parse_args(*args, **kwargs) self.process(args...

[ "def", "execute", "(", "self", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "args", "=", "self", ".", "parser", ".", "parse_args", "(", "*", "args", ",", "*", "*", "kwargs", ")", "self", ".", "process", "(", "args", ")" ]

31.2

12

def array(source_array, ctx=None, dtype=None): """Creates an array from any object exposing the array interface. Parameters ---------- source_array : array_like An object exposing the array interface, an object whose `__array__` method returns an array, or any (nested) sequence. ctx...

[ "def", "array", "(", "source_array", ",", "ctx", "=", "None", ",", "dtype", "=", "None", ")", ":", "if", "isinstance", "(", "source_array", ",", "NDArray", ")", ":", "dtype", "=", "source_array", ".", "dtype", "if", "dtype", "is", "None", "else", "dtyp...

37.677419

21.032258

def great_circle_dist(lat1, lon1, lat2, lon2): """ Get the distance (in meters) between two lat/lon points via the Haversine formula. Parameters ---------- lat1, lon1, lat2, lon2 : float Latitude and longitude in degrees. Returns ------- dist : float Distance in met...

[ "def", "great_circle_dist", "(", "lat1", ",", "lon1", ",", "lat2", ",", "lon2", ")", ":", "radius", "=", "6372795", "# meters", "lat1", "=", "math", ".", "radians", "(", "lat1", ")", "lon1", "=", "math", ".", "radians", "(", "lon1", ")", "lat2", "=",...

23.424242

20.757576

def analytical(src, rec, res, freqtime, solution='fs', signal=None, ab=11, aniso=None, epermH=None, epermV=None, mpermH=None, mpermV=None, verb=2): r"""Return the analytical full- or half-space solution. Calculate the electromagnetic frequency- or time-domain field due to infi...

[ "def", "analytical", "(", "src", ",", "rec", ",", "res", ",", "freqtime", ",", "solution", "=", "'fs'", ",", "signal", "=", "None", ",", "ab", "=", "11", ",", "aniso", "=", "None", ",", "epermH", "=", "None", ",", "epermV", "=", "None", ",", "mpe...

42.617117

25.040541

def on_close_shortcut(self, *args): """Close selected state machine (triggered by shortcut)""" state_machine_m = self.model.get_selected_state_machine_model() if state_machine_m is None: return self.on_close_clicked(None, state_machine_m, None, force=False)

[ "def", "on_close_shortcut", "(", "self", ",", "*", "args", ")", ":", "state_machine_m", "=", "self", ".", "model", ".", "get_selected_state_machine_model", "(", ")", "if", "state_machine_m", "is", "None", ":", "return", "self", ".", "on_close_clicked", "(", "N...

49.333333

15.666667

def update_picks(self, games=None, points=None): ''' games can be dict of {game.id: winner_id} for all picked games to update ''' if games: game_dict = {g.id: g for g in self.gameset.games.filter(id__in=games)} game_picks = {pick.game.id: pick for pick in self.gam...

[ "def", "update_picks", "(", "self", ",", "games", "=", "None", ",", "points", "=", "None", ")", ":", "if", "games", ":", "game_dict", "=", "{", "g", ".", "id", ":", "g", "for", "g", "in", "self", ".", "gameset", ".", "games", ".", "filter", "(", ...

39.4

21.5

def find_common(self, l): """ Find common parts in thelist items ex: 'ab' for ['abcd','abce','abf'] requires an ordered list """ if len(l) == 1: return l[0] init = l[0] for item in l[1:]: for i, (x, y) in enumerate(zip(init, item)): ...

[ "def", "find_common", "(", "self", ",", "l", ")", ":", "if", "len", "(", "l", ")", "==", "1", ":", "return", "l", "[", "0", "]", "init", "=", "l", "[", "0", "]", "for", "item", "in", "l", "[", "1", ":", "]", ":", "for", "i", ",", "(", "...

26

17.111111

def remove_constraint(self, name): """Remove a constraint from the problem""" index = self._get_constraint_index(name) # Remove from matrix self._A = np.delete(self.A, index, 0) # Remove from upper_bounds self.upper_bounds = np.delete(self.upper_bounds, index) # R...

[ "def", "remove_constraint", "(", "self", ",", "name", ")", ":", "index", "=", "self", ".", "_get_constraint_index", "(", "name", ")", "# Remove from matrix", "self", ".", "_A", "=", "np", ".", "delete", "(", "self", ".", "A", ",", "index", ",", "0", ")...

40.454545

7.181818

def child_task(self): '''child process - this holds all the GUI elements''' mp_util.child_close_fds() import matplotlib import wx_processguard from wx_loader import wx from live_graph_ui import GraphFrame matplotlib.use('WXAgg') app = wx.App(Fals...

[ "def", "child_task", "(", "self", ")", ":", "mp_util", ".", "child_close_fds", "(", ")", "import", "matplotlib", "import", "wx_processguard", "from", "wx_loader", "import", "wx", "from", "live_graph_ui", "import", "GraphFrame", "matplotlib", ".", "use", "(", "'W...

28.571429

15.285714

def mode_date(self, rows: List[Row], column: DateColumn) -> Date: """ Takes a list of rows and a column and returns the most frequent value under that column in those rows. """ most_frequent_list = self._get_most_frequent_values(rows, column) if not most_frequent_list: ...

[ "def", "mode_date", "(", "self", ",", "rows", ":", "List", "[", "Row", "]", ",", "column", ":", "DateColumn", ")", "->", "Date", ":", "most_frequent_list", "=", "self", ".", "_get_most_frequent_values", "(", "rows", ",", "column", ")", "if", "not", "most...

47.583333

16.25

def run_jar(jar_name, more_args=None, properties=None, hadoop_conf_dir=None, keep_streams=True): """ Run a jar on Hadoop (``hadoop jar`` command). All arguments are passed to :func:`run_cmd` (``args = [jar_name] + more_args``) . """ if hu.is_readable(jar_name): args = [jar_n...

[ "def", "run_jar", "(", "jar_name", ",", "more_args", "=", "None", ",", "properties", "=", "None", ",", "hadoop_conf_dir", "=", "None", ",", "keep_streams", "=", "True", ")", ":", "if", "hu", ".", "is_readable", "(", "jar_name", ")", ":", "args", "=", "...

32.777778

17.444444

def _retrieve_certificate(self, access_token, timeout=3): """ Generates a new private key and certificate request, submits the request to be signed by the SLCS CA and returns the certificate. """ logger.debug("Retrieve certificate with token.") # Generate a new key pair ...

[ "def", "_retrieve_certificate", "(", "self", ",", "access_token", ",", "timeout", "=", "3", ")", ":", "logger", ".", "debug", "(", "\"Retrieve certificate with token.\"", ")", "# Generate a new key pair", "key_pair", "=", "crypto", ".", "PKey", "(", ")", "key_pair...

37.045455

20.909091

def itemgetter(k, ellipsis=False, key=None): """ Looks up ``k`` as an index of the column's value. If ``k`` is a ``slice`` type object, then ``ellipsis`` can be given as a string to use to indicate truncation. Alternatively, ``ellipsis`` can be set to ``True`` to use a default ``'...'``. If a...

[ "def", "itemgetter", "(", "k", ",", "ellipsis", "=", "False", ",", "key", "=", "None", ")", ":", "def", "helper", "(", "instance", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "default_value", "=", "kwargs", ".", "get", "(", "'default_value'"...

37.736842

24.315789

def _ParseRecordLogline(self, parser_mediator, structure): """Parses a logline record structure and produces events. Args: parser_mediator (ParserMediator): mediates interactions between parsers and other components, such as storage and dfvfs. structure (pyparsing.ParseResults): structure...

[ "def", "_ParseRecordLogline", "(", "self", ",", "parser_mediator", ",", "structure", ")", ":", "date_time", "=", "dfdatetime_time_elements", ".", "TimeElementsInMilliseconds", "(", ")", "try", ":", "datetime_iso8601", "=", "self", ".", "_GetISO8601String", "(", "str...

40.064516

21.290323

def get_response_code(url, timeout=10): ''' Visit the URL and return the HTTP response code in 'int' ''' try: req = urllib2.urlopen(url, timeout=timeout) except HTTPError, e: return e.getcode() except Exception, _: fail("Couldn't reach the URL '%s'" % url) else: ...

[ "def", "get_response_code", "(", "url", ",", "timeout", "=", "10", ")", ":", "try", ":", "req", "=", "urllib2", ".", "urlopen", "(", "url", ",", "timeout", "=", "timeout", ")", "except", "HTTPError", ",", "e", ":", "return", "e", ".", "getcode", "(",...

28

18.666667

def is_question_answered(self, question_id): """has the question matching item_id been answered and not skipped""" question_map = self._get_question_map(question_id) # will raise NotFound() if 'missingResponse' in question_map['responses'][0]: return False else: ...

[ "def", "is_question_answered", "(", "self", ",", "question_id", ")", ":", "question_map", "=", "self", ".", "_get_question_map", "(", "question_id", ")", "# will raise NotFound()", "if", "'missingResponse'", "in", "question_map", "[", "'responses'", "]", "[", "0", ...

46.428571

18.285714

def _run_program(self, bin, fastafile, params=None): """ Run Trawler and predict motifs from a FASTA file. Parameters ---------- bin : str Command used to run the tool. fastafile : str Name of the FASTA input file. params : dict,...

[ "def", "_run_program", "(", "self", ",", "bin", ",", "fastafile", ",", "params", "=", "None", ")", ":", "params", "=", "self", ".", "_parse_params", "(", "params", ")", "tmp", "=", "NamedTemporaryFile", "(", "mode", "=", "\"w\"", ",", "dir", "=", "self...

31.518987

17.037975

def add_field(self, name: str, value: str, inline: bool = True) -> None: """ Adds an embed field. Parameters ---------- name: str Name attribute of the embed field. value: str Value attribute of the embed field. inline: bool ...

[ "def", "add_field", "(", "self", ",", "name", ":", "str", ",", "value", ":", "str", ",", "inline", ":", "bool", "=", "True", ")", "->", "None", ":", "field", "=", "{", "'name'", ":", "name", ",", "'value'", ":", "value", ",", "'inline'", ":", "in...

23.347826

19.26087

def verify_item_signature(signature_attribute, encrypted_item, verification_key, crypto_config): # type: (dynamodb_types.BINARY_ATTRIBUTE, dynamodb_types.ITEM, DelegatedKey, CryptoConfig) -> None """Verify the item signature. :param dict signature_attribute: Item signature DynamoDB attribute value :par...

[ "def", "verify_item_signature", "(", "signature_attribute", ",", "encrypted_item", ",", "verification_key", ",", "crypto_config", ")", ":", "# type: (dynamodb_types.BINARY_ATTRIBUTE, dynamodb_types.ITEM, DelegatedKey, CryptoConfig) -> None", "signature", "=", "signature_attribute", "...

46.789474

24.473684

def getComponentExceptionSummary(self, tmaster, component_name, instances=[], callback=None): """ Get the summary of exceptions for component_name and list of instances. Empty instance list will fetch all exceptions. """ if not tmaster or not tmaster.host or not tmaster.stats_port: return ...

[ "def", "getComponentExceptionSummary", "(", "self", ",", "tmaster", ",", "component_name", ",", "instances", "=", "[", "]", ",", "callback", "=", "None", ")", ":", "if", "not", "tmaster", "or", "not", "tmaster", ".", "host", "or", "not", "tmaster", ".", ...

40.381818

18.127273

def colorize(self, col, row, value=None): 'Returns curses attribute for the given col/row/value' # colorstack = tuple(c.coloropt for c in self.getColorizers() if wrapply(c.func, self, col, row, value)) colorstack = [] for colorizer in self.getColorizers(): try: ...

[ "def", "colorize", "(", "self", ",", "col", ",", "row", ",", "value", "=", "None", ")", ":", "# colorstack = tuple(c.coloropt for c in self.getColorizers() if wrapply(c.func, self, col, row, value))", "colorstack", "=", "[", "]", "for", "colorizer", "in", "self", ...

39.066667

24.666667

def to_mef(data, channels, sc_list, sc_channels = None): """ Transform flow cytometry data using a standard curve function. This function accepts a list of standard curves (`sc_list`) and a list of channels to which those standard curves should be applied (`sc_channels`). `to_mef` automatically che...

[ "def", "to_mef", "(", "data", ",", "channels", ",", "sc_list", ",", "sc_channels", "=", "None", ")", ":", "# Default sc_channels", "if", "sc_channels", "is", "None", ":", "if", "data", ".", "ndim", "==", "1", ":", "sc_channels", "=", "range", "(", "data"...

35.393258

19.707865

def _remove(self, telegram): """ Remove telegram from buffer and incomplete data preceding it. This is easier than validating the data before adding it to the buffer. :param str telegram: :return: """ # Remove data leading up to the telegram and the telegram itsel...

[ "def", "_remove", "(", "self", ",", "telegram", ")", ":", "# Remove data leading up to the telegram and the telegram itself.", "index", "=", "self", ".", "_buffer", ".", "index", "(", "telegram", ")", "+", "len", "(", "telegram", ")", "self", ".", "_buffer", "="...

38

19.272727

def inline(self) -> str: """ Return inline string format of the instance :return: """ return "{0}:{1}".format(self.index, ' '.join([str(p) for p in self.parameters]))

[ "def", "inline", "(", "self", ")", "->", "str", ":", "return", "\"{0}:{1}\"", ".", "format", "(", "self", ".", "index", ",", "' '", ".", "join", "(", "[", "str", "(", "p", ")", "for", "p", "in", "self", ".", "parameters", "]", ")", ")" ]

28.714286

19.857143

def dump_config(self): """Pretty print the configuration dict to stdout.""" yaml_content = self.get_merged_config() print('YAML Configuration\n%s\n' % yaml_content.read()) try: self.load() print('Python Configuration\n%s\n' % pretty(self.yamldocs)) except ...

[ "def", "dump_config", "(", "self", ")", ":", "yaml_content", "=", "self", ".", "get_merged_config", "(", ")", "print", "(", "'YAML Configuration\\n%s\\n'", "%", "yaml_content", ".", "read", "(", ")", ")", "try", ":", "self", ".", "load", "(", ")", "print",...

40.636364

18.818182

def to_special_value(self, value): """Checks if value is a special SPDX value such as NONE, NOASSERTION or UNKNOWN if so returns proper model. else returns value""" if value == self.spdx_namespace.none: return utils.SPDXNone() elif value == self.spdx_namespace.noasser...

[ "def", "to_special_value", "(", "self", ",", "value", ")", ":", "if", "value", "==", "self", ".", "spdx_namespace", ".", "none", ":", "return", "utils", ".", "SPDXNone", "(", ")", "elif", "value", "==", "self", ".", "spdx_namespace", ".", "noassertion", ...

39.583333

9.833333

def make_ccys(db): ''' Create the currency dictionary ''' dfr = 4 dollar = r'\u0024' peso = r'\u20b1' kr = r'kr' insert = db.insert # G10 & SCANDI insert('EUR', '978', 'EU', 1, 'Euro', dfr, 'EU', '30/360', 'ACT/360', future='FE', symbol=r'\u20ac', html='&#x...

[ "def", "make_ccys", "(", "db", ")", ":", "dfr", "=", "4", "dollar", "=", "r'\\u0024'", "peso", "=", "r'\\u20b1'", "kr", "=", "r'kr'", "insert", "=", "db", ".", "insert", "# G10 & SCANDI", "insert", "(", "'EUR'", ",", "'978'", ",", "'EU'", ",", "1", "...

39.958333

11.446429

def catalogue_mt_filter(self, mt_table, flag=None): """ Filter the catalogue using a magnitude-time table. The table has two columns and n-rows. :param nump.ndarray mt_table: Magnitude time table with n-rows where column 1 is year and column 2 is magnitude ...

[ "def", "catalogue_mt_filter", "(", "self", ",", "mt_table", ",", "flag", "=", "None", ")", ":", "if", "flag", "is", "None", ":", "# No flag defined, therefore all events are initially valid", "flag", "=", "np", ".", "ones", "(", "self", ".", "get_number_events", ...

36.904762

19.857143

def _get_id_from_username(self, username): """Looks up a username's id :param string username: Username to lookup :returns: The id that matches username. """ _mask = "mask[id, username]" _filter = {'users': {'username': utils.query_filter(username)}} user = self....

[ "def", "_get_id_from_username", "(", "self", ",", "username", ")", ":", "_mask", "=", "\"mask[id, username]\"", "_filter", "=", "{", "'users'", ":", "{", "'username'", ":", "utils", ".", "query_filter", "(", "username", ")", "}", "}", "user", "=", "self", ...

41.4

17.533333

def hide_arp_holder_arp_entry_interfacetype_Port_channel_Port_channel(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") hide_arp_holder = ET.SubElement(config, "hide-arp-holder", xmlns="urn:brocade.com:mgmt:brocade-arp") arp_entry = ET.SubElement(hide_arp_...

[ "def", "hide_arp_holder_arp_entry_interfacetype_Port_channel_Port_channel", "(", "self", ",", "*", "*", "kwargs", ")", ":", "config", "=", "ET", ".", "Element", "(", "\"config\"", ")", "hide_arp_holder", "=", "ET", ".", "SubElement", "(", "config", ",", "\"hide-ar...

53.866667

23.4

def _get_merged_params_string(self): """Returns the merged nextflow params string from a dictionary object. The params dict should be a set of key:value pairs with the parameter name, and the default parameter value:: self.params = { "genomeSize": 2.1, ...

[ "def", "_get_merged_params_string", "(", "self", ")", ":", "params_temp", "=", "{", "}", "for", "p", "in", "self", ".", "processes", ":", "logger", ".", "debug", "(", "\"[{}] Adding parameters: {}\"", ".", "format", "(", "p", ".", "template", ",", "p", "."...

30.3

24.825

def get_requirements_file_from_url(url): """fetches the requiremets from the url""" response = requests.get(url) if response.status_code == 200: return StringIO(response.text) else: return StringIO("")

[ "def", "get_requirements_file_from_url", "(", "url", ")", ":", "response", "=", "requests", ".", "get", "(", "url", ")", "if", "response", ".", "status_code", "==", "200", ":", "return", "StringIO", "(", "response", ".", "text", ")", "else", ":", "return",...

28.375

12.375

def merge_featurecollection(*jsons): """ merge features into one featurecollection Keyword arguments: jsons -- jsons object list return geojson featurecollection """ features = [] for json in jsons: if json['type'] == 'FeatureCollection': for feature in json['fea...

[ "def", "merge_featurecollection", "(", "*", "jsons", ")", ":", "features", "=", "[", "]", "for", "json", "in", "jsons", ":", "if", "json", "[", "'type'", "]", "==", "'FeatureCollection'", ":", "for", "feature", "in", "json", "[", "'features'", "]", ":", ...

27.733333

12.666667

def _R2deriv(self,R,z,phi=0.,t=0.): """ NAME: _Rderiv PURPOSE: evaluate the second radial derivative for this potential INPUT: R - Galactocentric cylindrical radius z - vertical height phi - azimuth t - time OUTPUT...

[ "def", "_R2deriv", "(", "self", ",", "R", ",", "z", ",", "phi", "=", "0.", ",", "t", "=", "0.", ")", ":", "r2", "=", "R", "**", "2.", "+", "z", "**", "2.", "rb", "=", "nu", ".", "sqrt", "(", "r2", "+", "self", ".", "b2", ")", "return", ...

29.15

15.35

def probConn (self, preCellsTags, postCellsTags, connParam): from .. import sim ''' Generates connections between all pre and post-syn cells based on probability values''' if sim.cfg.verbose: print('Generating set of probabilistic connections (rule: %s) ...' % (connParam['label'])) allRands = self.gen...

[ "def", "probConn", "(", "self", ",", "preCellsTags", ",", "postCellsTags", ",", "connParam", ")", ":", "from", ".", ".", "import", "sim", "if", "sim", ".", "cfg", ".", "verbose", ":", "print", "(", "'Generating set of probabilistic connections (rule: %s) ...'", ...

76.020408

51.44898

def set_schedule(self, schedule): """Takes the output from `auto` and sets the attributes """ self.Tmax = schedule['tmax'] self.Tmin = schedule['tmin'] self.steps = int(schedule['steps']) self.updates = int(schedule['updates'])

[ "def", "set_schedule", "(", "self", ",", "schedule", ")", ":", "self", ".", "Tmax", "=", "schedule", "[", "'tmax'", "]", "self", ".", "Tmin", "=", "schedule", "[", "'tmin'", "]", "self", ".", "steps", "=", "int", "(", "schedule", "[", "'steps'", "]",...

38.428571

3.571429

def cumulative_statistics(self): """ Access the cumulative_statistics :returns: twilio.rest.taskrouter.v1.workspace.worker.workers_cumulative_statistics.WorkersCumulativeStatisticsList :rtype: twilio.rest.taskrouter.v1.workspace.worker.workers_cumulative_statistics.WorkersCumulativeStat...

[ "def", "cumulative_statistics", "(", "self", ")", ":", "if", "self", ".", "_cumulative_statistics", "is", "None", ":", "self", ".", "_cumulative_statistics", "=", "WorkersCumulativeStatisticsList", "(", "self", ".", "_version", ",", "workspace_sid", "=", "self", "...

46.461538

24

def find_cards(self, source=None, **filters): """ Generate a card pool with all cards matching specified filters """ if not filters: new_filters = self.filters.copy() else: new_filters = filters.copy() for k, v in new_filters.items(): if isinstance(v, LazyValue): new_filters[k] = v.evaluate(so...

[ "def", "find_cards", "(", "self", ",", "source", "=", "None", ",", "*", "*", "filters", ")", ":", "if", "not", "filters", ":", "new_filters", "=", "self", ".", "filters", ".", "copy", "(", ")", "else", ":", "new_filters", "=", "filters", ".", "copy",...

24.8

14.4

async def dist(self, mesg): ''' Distribute an existing event tuple. Args: mesg ((str,dict)): An event tuple. Example: await base.dist( ('foo',{'bar':'baz'}) ) ''' if self.isfini: return () ret = [] for func in self...

[ "async", "def", "dist", "(", "self", ",", "mesg", ")", ":", "if", "self", ".", "isfini", ":", "return", "(", ")", "ret", "=", "[", "]", "for", "func", "in", "self", ".", "_syn_funcs", ".", "get", "(", "mesg", "[", "0", "]", ",", "(", ")", ")"...

25.088235

22.5

def track_field(field): """ Returns whether the given field should be tracked by Auditlog. Untracked fields are many-to-many relations and relations to the Auditlog LogEntry model. :param field: The field to check. :type field: Field :return: Whether the given field should be tracked. :rty...

[ "def", "track_field", "(", "field", ")", ":", "from", "auditlog", ".", "models", "import", "LogEntry", "# Do not track many to many relations", "if", "field", ".", "many_to_many", ":", "return", "False", "# Do not track relations to LogEntry", "if", "getattr", "(", "f...

29.52

23.04

def mark(self, channel_name, ts): """ https://api.slack.com/methods/channels.mark """ channel_id = self.get_channel_id(channel_name) self.params.update({ 'channel': channel_id, 'ts': ts, }) return FromUrl('https://slack.com/api/channels....

[ "def", "mark", "(", "self", ",", "channel_name", ",", "ts", ")", ":", "channel_id", "=", "self", ".", "get_channel_id", "(", "channel_name", ")", "self", ".", "params", ".", "update", "(", "{", "'channel'", ":", "channel_id", ",", "'ts'", ":", "ts", ",...

39.888889

15.444444