kejian/codesearchnet-python-pep8-full · Datasets at Hugging Face

text stringlengths 75 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 0.18
def get(self, sid): """ Constructs a IncomingPhoneNumberContext :param sid: The unique string that identifies the resource :returns: twilio.rest.api.v2010.account.incoming_phone_number.IncomingPhoneNumberContext :rtype: twilio.rest.api.v2010.account.incoming_phone_number.Incomi...	[ "def", "get", "(", "self", ",", "sid", ")", ":", "return", "IncomingPhoneNumberContext", "(", "self", ".", "_version", ",", "account_sid", "=", "self", ".", "_solution", "[", "'account_sid'", "]", ",", "sid", "=", "sid", ",", ")" ]	45.4	0.010799
def to_json(self): """Convert the Design Day to a dictionary.""" return { 'location': self.location.to_json(), 'design_days': [des_d.to_json() for des_d in self.design_days] }	[ "def", "to_json", "(", "self", ")", ":", "return", "{", "'location'", ":", "self", ".", "location", ".", "to_json", "(", ")", ",", "'design_days'", ":", "[", "des_d", ".", "to_json", "(", ")", "for", "des_d", "in", "self", ".", "design_days", "]", "}...	36.333333	0.008969
def process_op(self, rc, nbytes, overlap): """ Handles the possible completion or re-queueing if conditions haven't been met (the `complete` callable returns false) of a overlapped request. """ act = overlap.object overlap.object = None if act in self.token...	[ "def", "process_op", "(", "self", ",", "rc", ",", "nbytes", ",", "overlap", ")", ":", "act", "=", "overlap", ".", "object", "overlap", ".", "object", "=", "None", "if", "act", "in", "self", ".", "tokens", ":", "ol", ",", "perform", ",", "complete", ...	43	0.004665
def deprecated(message): """The decorator to mark deprecated functions.""" from traceback import extract_stack assert message, "`message` argument in @deprecated is required." def deprecated_decorator(fun): def decorator_invisible(args, *kwargs): stack = extract_stack() ...	[ "def", "deprecated", "(", "message", ")", ":", "from", "traceback", "import", "extract_stack", "assert", "message", ",", "\"`message` argument in @deprecated is required.\"", "def", "deprecated_decorator", "(", "fun", ")", ":", "def", "decorator_invisible", "(", "*", ...	42.809524	0.002176
def infer_declared_from_conditions(conds, namespace=None): ''' like infer_declared except that it is passed a set of first party caveat conditions as a list of string rather than a set of macaroons. ''' conflicts = [] # If we can't resolve that standard namespace, then we'll look for # just bare...	[ "def", "infer_declared_from_conditions", "(", "conds", ",", "namespace", "=", "None", ")", ":", "conflicts", "=", "[", "]", "# If we can't resolve that standard namespace, then we'll look for", "# just bare \"declared\" caveats which will work OK for legacy", "# macaroons with no nam...	32.057143	0.000865
def repstring_penalty(reps, intensities, desired_reps, desired_intensity, minimum_rep): """Penalty function which calculates how "bad" a set of reps and intensities is, compared to the desired repetitions, the desired intensity level and the minimum repetitions. ...	[ "def", "repstring_penalty", "(", "reps", ",", "intensities", ",", "desired_reps", ",", "desired_intensity", ",", "minimum_rep", ")", ":", "# Punish when the mean intensity is far from the desired one", "desired", "=", "desired_intensity", "error1", "=", "abs", "(", "stati...	37.245614	0.005966
def check_thresholds(self, service=None, use_ta=True): """ Check all limits and current usage against their specified thresholds; return all :py:class:`~.AwsLimit` instances that have crossed one or more of their thresholds. If ``service`` is specified, the returned dict has one...	[ "def", "check_thresholds", "(", "self", ",", "service", "=", "None", ",", "use_ta", "=", "True", ")", ":", "res", "=", "{", "}", "to_get", "=", "self", ".", "services", "if", "service", "is", "not", "None", ":", "to_get", "=", "dict", "(", "(", "ea...	40.525	0.001205
def close(self): """Stops accepting new connections, cancels all currently running requests. Request handlers are able to handle `CancelledError` and exit properly. """ if self._server is None: raise RuntimeError('Server is not started') self._server.close() ...	[ "def", "close", "(", "self", ")", ":", "if", "self", ".", "_server", "is", "None", ":", "raise", "RuntimeError", "(", "'Server is not started'", ")", "self", ".", "_server", ".", "close", "(", ")", "for", "handler", "in", "self", ".", "_handlers", ":", ...	37.6	0.005195
def fit_transform(self, features, class_labels): """Convenience function that fits the provided data then constructs a new feature from the provided features. Parameters ---------- features: array-like {n_samples, n_features} Feature matrix class_labels: array-like {...	[ "def", "fit_transform", "(", "self", ",", "features", ",", "class_labels", ")", ":", "self", ".", "fit", "(", "features", ",", "class_labels", ")", "return", "self", ".", "transform", "(", "features", ")" ]	32.333333	0.005008
def TransformedRandomVariable(random_variable, # pylint: disable=invalid-name reversible_layer, name=None, sample_shape=(), value=None): """Random variable for f(x), where x ~ p(x) and f is reversi...	[ "def", "TransformedRandomVariable", "(", "random_variable", ",", "# pylint: disable=invalid-name", "reversible_layer", ",", "name", "=", "None", ",", "sample_shape", "=", "(", ")", ",", "value", "=", "None", ")", ":", "return", "ed", ".", "RandomVariable", "(", ...	48.75	0.005034
def link_pantsrefs(soups, precomputed): """Transorm soups: <a pantsref="foo"> becomes <a href="../foo_page.html#foo">""" for (page, soup) in soups.items(): for a in soup.find_all('a'): if not a.has_attr('pantsref'): continue pantsref = a['pantsref'] if not pantsref in precomputed.pants...	[ "def", "link_pantsrefs", "(", "soups", ",", "precomputed", ")", ":", "for", "(", "page", ",", "soup", ")", "in", "soups", ".", "items", "(", ")", ":", "for", "a", "in", "soup", ".", "find_all", "(", "'a'", ")", ":", "if", "not", "a", ".", "has_at...	47	0.018975
def dataReceived(self, data): """ Parses chunks of bytes into responses. Whenever a complete response is received, this method extracts its payload and calls L{responseReceived} to process it. @param data: A chunk of data representing a (possibly partial) response @type...	[ "def", "dataReceived", "(", "self", ",", "data", ")", ":", "size", "=", "len", "(", "self", ".", "_buffer", ")", "+", "len", "(", "data", ")", "if", "size", ">", "self", ".", "MAX_LENGTH", ":", "self", ".", "lengthLimitExceeded", "(", "size", ")", ...	34.481481	0.00209
def negative_directional_movement(high_data, low_data): """ Negative Directional Movement (-DM). -DM: if DWNMOVE > UPMOVE and DWNMOVE > 0 then -DM = DWNMOVE else -Dm = 0 """ catch_errors.check_for_input_len_diff(high_data, low_data) up_moves = calculate_up_moves(high_data) down_moves = cal...	[ "def", "negative_directional_movement", "(", "high_data", ",", "low_data", ")", ":", "catch_errors", ".", "check_for_input_len_diff", "(", "high_data", ",", "low_data", ")", "up_moves", "=", "calculate_up_moves", "(", "high_data", ")", "down_moves", "=", "calculate_do...	28.894737	0.001764
def _get_sg_ids(self): """Get IDs for all defined security groups. Returns: list: security group IDs for all lambda_extras """ try: lambda_extras = self.settings['security_groups']['lambda_extras'] except KeyError: lambda_extras = [] ...	[ "def", "_get_sg_ids", "(", "self", ")", ":", "try", ":", "lambda_extras", "=", "self", ".", "settings", "[", "'security_groups'", "]", "[", "'lambda_extras'", "]", "except", "KeyError", ":", "lambda_extras", "=", "[", "]", "security_groups", "=", "[", "self"...	33.647059	0.005102
def interp(self): """Interpolation type of this discretization.""" if self.ndim == 0: return 'nearest' elif all(interp == self.interp_byaxis[0] for interp in self.interp_byaxis): return self.interp_byaxis[0] else: return self.interp_by...	[ "def", "interp", "(", "self", ")", ":", "if", "self", ".", "ndim", "==", "0", ":", "return", "'nearest'", "elif", "all", "(", "interp", "==", "self", ".", "interp_byaxis", "[", "0", "]", "for", "interp", "in", "self", ".", "interp_byaxis", ")", ":", ...	35.111111	0.006173
def getContent(self): """ Returns: str: Content of tag (everything between `opener` and `endtag`). """ if not self.isTag() and self._element: return self._element if not self.childs: return "" output = "" for c in self.childs:...	[ "def", "getContent", "(", "self", ")", ":", "if", "not", "self", ".", "isTag", "(", ")", "and", "self", ".", "_element", ":", "return", "self", ".", "_element", "if", "not", "self", ".", "childs", ":", "return", "\"\"", "output", "=", "\"\"", "for", ...	23.3	0.004124
def _GetReportService(self): """Lazily initializes a report service client.""" if not self._report_service: self._report_service = self._ad_manager_client.GetService( 'ReportService', self._version, self._server) return self._report_service	[ "def", "_GetReportService", "(", "self", ")", ":", "if", "not", "self", ".", "_report_service", ":", "self", ".", "_report_service", "=", "self", ".", "_ad_manager_client", ".", "GetService", "(", "'ReportService'", ",", "self", ".", "_version", ",", "self", ...	43.833333	0.007463
def inverse_deriv(self, z): """ Derivative of the inverse of the power transform Parameters ---------- z : array-like `z` is usually the linear predictor for a GLM or GEE model. Returns ------- g^(-1)'(z) : array The value of the ...	[ "def", "inverse_deriv", "(", "self", ",", "z", ")", ":", "return", "np", ".", "power", "(", "z", ",", "(", "1", "-", "self", ".", "power", ")", "/", "self", ".", "power", ")", "/", "self", ".", "power" ]	28.1875	0.004292
def put(self, _url, **kwargs): """ This will perform a manual PUT request where the user will supply the sub_url and request params (URN) The connections class will add the base_uri and authentication credentials. PUT requests create data on the server :param _ur...	[ "def", "put", "(", "self", ",", "_url", ",", "", "", "kwargs", ")", ":", "api_call", "=", "self", ".", "request", "(", "'PUT'", ",", "_url", ",", "", "", "kwargs", ")", "self", ".", "cookies", ".", "update", "(", "api_call", ".", "response_cook...	43.3125	0.002825
def new(params, event_shape=(), validate_args=False, name=None): """Create the distribution instance from a `params` vector.""" with tf.compat.v1.name_scope(name, 'IndependentPoisson', [params, event_shape]): params = tf.convert_to_tensor(value=params, name='params') ...	[ "def", "new", "(", "params", ",", "event_shape", "=", "(", ")", ",", "validate_args", "=", "False", ",", "name", "=", "None", ")", ":", "with", "tf", ".", "compat", ".", "v1", ".", "name_scope", "(", "name", ",", "'IndependentPoisson'", ",", "[", "pa...	44.35	0.005519
def _appendGuideline(self, position, angle, name=None, color=None, identifier=None, **kwargs): """ position will be a valid position (x, y). angle will be a valid angle. name will be a valid guideline name or None. color will be a valid color or None . identifier will be ...	[ "def", "_appendGuideline", "(", "self", ",", "position", ",", "angle", ",", "name", "=", "None", ",", "color", "=", "None", ",", "identifier", "=", "None", ",", "", "", "kwargs", ")", ":", "self", ".", "raiseNotImplementedError", "(", ")" ]	37.384615	0.006024
def _from_arrays(self, x, y, z): """ Create VTK structured grid directly from numpy arrays. Parameters ---------- x : np.ndarray Position of the points in x direction. y : np.ndarray Position of the points in y direction. z : np.ndarray ...	[ "def", "_from_arrays", "(", "self", ",", "x", ",", "y", ",", "z", ")", ":", "if", "not", "(", "x", ".", "shape", "==", "y", ".", "shape", "==", "z", ".", "shape", ")", ":", "raise", "Exception", "(", "'Input point array shapes must match exactly'", ")"...	29.34375	0.002062
def _preconditions_snapshots_postconditions(checker: Callable) -> _PrePostSnaps: """Collect the preconditions, snapshots and postconditions from a contract checker of a function.""" preconditions = getattr(checker, "__preconditions__", []) # type: List[List[icontract._Contract]] assert all(isinstance(prec...	[ "def", "_preconditions_snapshots_postconditions", "(", "checker", ":", "Callable", ")", "->", "_PrePostSnaps", ":", "preconditions", "=", "getattr", "(", "checker", ",", "\"__preconditions__\"", ",", "[", "]", ")", "# type: List[List[icontract._Contract]]", "assert", "a...	57.35	0.008576
def load(cls, build_file, name, target_aliases): """A BuildFileManipulator factory class method. Note that BuildFileManipulator requires a very strict formatting of target declaration. In particular, it wants to see a newline after `target_type(`, `dependencies = [`, and the last param to the target co...	[ "def", "load", "(", "cls", ",", "build_file", ",", "name", ",", "target_aliases", ")", ":", "with", "open", "(", "build_file", ".", "full_path", ",", "'r'", ")", "as", "f", ":", "source", "=", "f", ".", "read", "(", ")", "source_lines", "=", "source"...	49.457143	0.007038
def encrypt_binary(self, binary, args, kwargs): """ input: bytes, output: bytes """ return self.encrypt(binary, args, **kwargs)	[ "def", "encrypt_binary", "(", "self", ",", "binary", ",", "", "args", ",", "", "", "kwargs", ")", ":", "return", "self", ".", "encrypt", "(", "binary", ",", "", "args", ",", "", "", "kwargs", ")" ]	31.8	0.01227
def schedule(self, materials=None, variables=None, secure_variables=None): """ Scheduling allows user to trigger a specific pipeline. :param materials: material revisions to use. :param variables: environment variables to set. :param secure_variables: secure environment variable...	[ "def", "schedule", "(", "self", ",", "materials", "=", "None", ",", "variables", "=", "None", ",", "secure_variables", "=", "None", ")", ":", "return", "self", ".", "_pipeline", ".", "schedule", "(", "name", "=", "self", ".", "data", ".", "name", ",", ...	37.333333	0.003484
def get_remote_file(self, remote_path, local_path): """Fetch remote File. :param remote_path: remote path :param local_path: local path """ sftp_client = self.transport.open_sftp_client() LOG.debug('Get the remote file. ' 'Source=%(src)s. Target=%(targe...	[ "def", "get_remote_file", "(", "self", ",", "remote_path", ",", "local_path", ")", ":", "sftp_client", "=", "self", ".", "transport", ".", "open_sftp_client", "(", ")", "LOG", ".", "debug", "(", "'Get the remote file. '", "'Source=%(src)s. Target=%(target)s.'", "%",...	38.6875	0.003155
def getDueDate(self): """Used to populate getDueDate index and metadata. This calculates the difference between the time the analysis processing started and the maximum turnaround time. If the analysis has no turnaround time set or is not yet ready for proces, returns None """ ...	[ "def", "getDueDate", "(", "self", ")", ":", "tat", "=", "self", ".", "getMaxTimeAllowed", "(", ")", "if", "not", "tat", ":", "return", "None", "start", "=", "self", ".", "getStartProcessDate", "(", ")", "if", "not", "start", ":", "return", "None", "# d...	32.377778	0.001332
def store(hdu,dbase='cfeps',duser='cfhls',dtype='MYSQL',table='source'): """Write the contents of a MOP data structure to a SQL table""" import MOPdbaccess db=MOPdbaccess.connect(dbase,duser,dbSystem=dtype) dbc=db.cursor() ### INSERT THE 'HEADER' in the meta-data table file_id=hdu['header']['i...	[ "def", "store", "(", "hdu", ",", "dbase", "=", "'cfeps'", ",", "duser", "=", "'cfhls'", ",", "dtype", "=", "'MYSQL'", ",", "table", "=", "'source'", ")", ":", "import", "MOPdbaccess", "db", "=", "MOPdbaccess", ".", "connect", "(", "dbase", ",", "duser"...	33.784314	0.026509
def date_time_this_century( self, before_now=True, after_now=False, tzinfo=None): """ Gets a DateTime object for the current century. :param before_now: include days in current century before today :param after_now: include days in current...	[ "def", "date_time_this_century", "(", "self", ",", "before_now", "=", "True", ",", "after_now", "=", "False", ",", "tzinfo", "=", "None", ")", ":", "now", "=", "datetime", ".", "now", "(", "tzinfo", ")", "this_century_start", "=", "datetime", "(", "now", ...	39.896552	0.003376
def merkle(hashes, hash_f=double_sha256): """Take a list of hashes, and return the root merkle hash.""" while len(hashes) > 1: hashes = merkle_pair(hashes, hash_f) return hashes[0]	[ "def", "merkle", "(", "hashes", ",", "hash_f", "=", "double_sha256", ")", ":", "while", "len", "(", "hashes", ")", ">", "1", ":", "hashes", "=", "merkle_pair", "(", "hashes", ",", "hash_f", ")", "return", "hashes", "[", "0", "]" ]	39.2	0.005
def html(self) -> str: """Get whole html representation of this node.""" if self._inner_element: return self.start_tag + self._inner_element.html + self.end_tag return super().html	[ "def", "html", "(", "self", ")", "->", "str", ":", "if", "self", ".", "_inner_element", ":", "return", "self", ".", "start_tag", "+", "self", ".", "_inner_element", ".", "html", "+", "self", ".", "end_tag", "return", "super", "(", ")", ".", "html" ]	42.4	0.009259
def calc_qar_v1(self): """Calculate the discharge responses of the different AR processes. Required derived parameters: \|Nmb\| \|AR_Order\| \|AR_Coefs\| Required log sequence: \|LogOut\| Calculated flux sequence: \|QAR\| Examples: Assume there are four response func...	[ "def", "calc_qar_v1", "(", "self", ")", ":", "der", "=", "self", ".", "parameters", ".", "derived", ".", "fastaccess", "flu", "=", "self", ".", "sequences", ".", "fluxes", ".", "fastaccess", "log", "=", "self", ".", "sequences", ".", "logs", ".", "fast...	33	0.000467
def ensure_unicode_string(obj): """ Return a unicode string representation of the given obj. :param obj: The obj we want to represent in unicode :type obj: varies :rtype: `unicode` """ try: return unicode_type(obj) except UnicodeDecodeError: if ha...	[ "def", "ensure_unicode_string", "(", "obj", ")", ":", "try", ":", "return", "unicode_type", "(", "obj", ")", "except", "UnicodeDecodeError", ":", "if", "hasattr", "(", "obj", ",", "'decode'", ")", ":", "return", "obj", ".", "decode", "(", "'utf-8'", ",", ...	25.058824	0.002262
def connect(self, sid, namespace): """Register a client connection to a namespace.""" self.enter_room(sid, namespace, None) self.enter_room(sid, namespace, sid)	[ "def", "connect", "(", "self", ",", "sid", ",", "namespace", ")", ":", "self", ".", "enter_room", "(", "sid", ",", "namespace", ",", "None", ")", "self", ".", "enter_room", "(", "sid", ",", "namespace", ",", "sid", ")" ]	45.25	0.01087
def modify_member(row, key, value): ''' properly modifies a dict or class attribute ''' (target, tkey, tvalue) = dict_crawl(row, key) if target: target[tkey] = value return row	[ "def", "modify_member", "(", "row", ",", "key", ",", "value", ")", ":", "(", "target", ",", "tkey", ",", "tvalue", ")", "=", "dict_crawl", "(", "row", ",", "key", ")", "if", "target", ":", "target", "[", "tkey", "]", "=", "value", "return", "row" ]	32.5	0.005
def update_summary(self, w): """Update summary. The new summary is a weighted average of reviews i.e. .. math:: \\frac{\\sum_{r \\in R} \\mbox{weight}(r) \\times \\mbox{review}(r)} {\\sum_{r \\in R} \\mbox{weight}(r)}, where :math:`R` is a set of reviewers...	[ "def", "update_summary", "(", "self", ",", "w", ")", ":", "old", "=", "self", ".", "summary", ".", "v", "# pylint: disable=no-member", "reviewers", "=", "self", ".", "_graph", ".", "retrieve_reviewers", "(", "self", ")", "reviews", "=", "[", "self", ".", ...	34.225806	0.00275
def start_app_and_connect(self): """Overrides superclass.""" # Check that sl4a is installed out = self._adb.shell('pm list package') if not utils.grep('com.googlecode.android_scripting', out): raise jsonrpc_client_base.AppStartError( self._ad, '%s is not insta...	[ "def", "start_app_and_connect", "(", "self", ")", ":", "# Check that sl4a is installed", "out", "=", "self", ".", "_adb", ".", "shell", "(", "'pm list package'", ")", "if", "not", "utils", ".", "grep", "(", "'com.googlecode.android_scripting'", ",", "out", ")", ...	43.777778	0.001656
def auto_argparser(description=None): """Generate argparser from config file automatically (experimental) """ partial_parser = ArgumentParser(description=description) partial_parser.add_argument('config', help='config file path') cfg_file = partial_parser.parse_known_args()[0].co...	[ "def", "auto_argparser", "(", "description", "=", "None", ")", ":", "partial_parser", "=", "ArgumentParser", "(", "description", "=", "description", ")", "partial_parser", ".", "add_argument", "(", "'config'", ",", "help", "=", "'config file path'", ")", "cfg_file...	48.363636	0.00369
def addModel(D, models): """ Insert model data into a LiPD dataset Examples of model naming: chron0model0 chron0model1 chron1model0 Example of 'models' variable: { chron0model0: { "method": {...}, "summaryTable": [...], ...	[ "def", "addModel", "(", "D", ",", "models", ")", ":", "try", ":", "# Loop for each model that needs to be added", "for", "_model_name", ",", "_model_data", "in", "models", ".", "items", "(", ")", ":", "# split the table name into a path that we can use", "_m", "=", ...	32.866667	0.00197
def add_environment_information(meta): """Record environment information.""" meta["timestamp"] = datetime.utcnow().isoformat(" ") meta["platform"] = platform.system() meta["release"] = platform.release() meta["python"] = platform.python_version() meta["packages"] = get_pk...	[ "def", "add_environment_information", "(", "meta", ")", ":", "meta", "[", "\"timestamp\"", "]", "=", "datetime", ".", "utcnow", "(", ")", ".", "isoformat", "(", "\" \"", ")", "meta", "[", "\"platform\"", "]", "=", "platform", ".", "system", "(", ")", "me...	47.142857	0.005952
def to_dict(self, delimiter=DEFAULT_DELIMITER, dict_type=collections.OrderedDict): """ Get the dictionary representation of the current parser. :param str delimiter: The delimiter used for nested dictionaries, defaults to ":", optional :param class dict_type: The dictionary type to ...	[ "def", "to_dict", "(", "self", ",", "delimiter", "=", "DEFAULT_DELIMITER", ",", "dict_type", "=", "collections", ".", "OrderedDict", ")", ":", "root_key", "=", "self", ".", "sections", "(", ")", "[", "0", "]", "return", "self", ".", "_build_dict", "(", "...	45.6	0.005731
def enter(self): """Send a StartRequest.""" self._communication.send(StartRequest, self._communication.left_end_needle, self._communication.right_end_needle)	[ "def", "enter", "(", "self", ")", ":", "self", ".", "_communication", ".", "send", "(", "StartRequest", ",", "self", ".", "_communication", ".", "left_end_needle", ",", "self", ".", "_communication", ".", "right_end_needle", ")" ]	47	0.008368
def update_ssl_termination(self, loadbalancer, securePort=None, enabled=None, secureTrafficOnly=None): """ Updates existing SSL termination information for the load balancer without affecting the existing certificates/keys. """ return loadbalancer.update_ssl_terminati...	[ "def", "update_ssl_termination", "(", "self", ",", "loadbalancer", ",", "securePort", "=", "None", ",", "enabled", "=", "None", ",", "secureTrafficOnly", "=", "None", ")", ":", "return", "loadbalancer", ".", "update_ssl_termination", "(", "securePort", "=", "sec...	51	0.009639
def line_oriented(cls, line_oriented_options, console): """Given Goal.Options and a Console, yields functions for writing to stdout and stderr, respectively. The passed options instance will generally be the `Goal.Options` of a `LineOriented` `Goal`. """ if type(line_oriented_options) != cls.Options: ...	[ "def", "line_oriented", "(", "cls", ",", "line_oriented_options", ",", "console", ")", ":", "if", "type", "(", "line_oriented_options", ")", "!=", "cls", ".", "Options", ":", "raise", "AssertionError", "(", "'Expected Options for `{}`, got: {}'", ".", "format", "(...	36.692308	0.015322
def get_auth_token(self, user_payload): """ Extracts token from the `user_payload` """ token = user_payload.get('token') or None if not token: raise ValueError('`user_payload` must provide api token') return '{auth_header_prefix} {token}'.format( ...	[ "def", "get_auth_token", "(", "self", ",", "user_payload", ")", ":", "token", "=", "user_payload", ".", "get", "(", "'token'", ")", "or", "None", "if", "not", "token", ":", "raise", "ValueError", "(", "'`user_payload` must provide api token'", ")", "return", "...	36.7	0.005319
def plot_iso(axis, step, var): """Plot isocontours of scalar field. Args: axis (:class:`matplotlib.axes.Axes`): the axis handler of an existing matplotlib figure where the isocontours should be plotted. step (:class:`~stagpy.stagyydata._Step`): a step of a StagyyData ...	[ "def", "plot_iso", "(", "axis", ",", "step", ",", "var", ")", ":", "xmesh", ",", "ymesh", ",", "fld", "=", "get_meshes_fld", "(", "step", ",", "var", ")", "if", "conf", ".", "field", ".", "shift", ":", "fld", "=", "np", ".", "roll", "(", "fld", ...	36.8	0.001767
def _select_sql(self, **kwargs): """ Overridden function to generate the SELECT part of the SQL statement, with the addition of the a modifier if present. """ return 'SELECT {distinct}{modifier}{select}'.format( distinct='DISTINCT ' if self._distinct else '', ...	[ "def", "_select_sql", "(", "self", ",", "", "", "kwargs", ")", ":", "return", "'SELECT {distinct}{modifier}{select}'", ".", "format", "(", "distinct", "=", "'DISTINCT '", "if", "self", ".", "_distinct", "else", "''", ",", "modifier", "=", "'{} '", ".", "fo...	49.727273	0.007181
def _reaction_cartesion_expansion_unqualified_helper( graph: BELGraph, u: BaseEntity, v: BaseEntity, d: dict, ) -> None: """Helper to deal with cartension expansion in unqualified edges.""" if isinstance(u, Reaction) and isinstance(v, Reaction): enzymes = _get_catalysts_i...	[ "def", "_reaction_cartesion_expansion_unqualified_helper", "(", "graph", ":", "BELGraph", ",", "u", ":", "BaseEntity", ",", "v", ":", "BaseEntity", ",", "d", ":", "dict", ",", ")", "->", "None", ":", "if", "isinstance", "(", "u", ",", "Reaction", ")", "and...	34.073529	0.001258
def build(tasks, worker_scheduler_factory=None, detailed_summary=False, **env_params): """ Run internally, bypassing the cmdline parsing. Useful if you have some luigi code that you want to run internally. Example: .. code-block:: python luigi.build([MyTask1(), MyTask2()], local_scheduler...	[ "def", "build", "(", "tasks", ",", "worker_scheduler_factory", "=", "None", ",", "detailed_summary", "=", "False", ",", "", "", "env_params", ")", ":", "if", "\"no_lock\"", "not", "in", "env_params", ":", "env_params", "[", "\"no_lock\"", "]", "=", "True",...	36.16	0.00431
def _update_known_atts(self, **kwargs): """Updates instance attributes with supplied keyword arguments. """ for k, v in kwargs.items(): if k not in ATTR_KEYS: # Warn if passed in unknown kwargs raise SyntaxWarning('Unknown argument: {}'.format(k)) ...	[ "def", "_update_known_atts", "(", "self", ",", "", "", "kwargs", ")", ":", "for", "k", ",", "v", "in", "kwargs", ".", "items", "(", ")", ":", "if", "k", "not", "in", "ATTR_KEYS", ":", "# Warn if passed in unknown kwargs", "raise", "SyntaxWarning", "(", ...	41.363636	0.006452
def plot_neuron_on_density(population, # pylint: disable=too-many-arguments bins=100, new_fig=True, subplot=111, levels=None, plane='xy', colorlabel='Nodes per unit area', labelfontsize=16, color_map='Reds', no_colorbar=False, threshold=0....	[ "def", "plot_neuron_on_density", "(", "population", ",", "# pylint: disable=too-many-arguments", "bins", "=", "100", ",", "new_fig", "=", "True", ",", "subplot", "=", "111", ",", "levels", "=", "None", ",", "plane", "=", "'xy'", ",", "colorlabel", "=", "'Nodes...	58.529412	0.005935
def get_checksum32(oqparam, hazard=False): """ Build an unsigned 32 bit integer from the input files of a calculation. :param oqparam: an OqParam instance :param hazard: if True, consider only the hazard files :returns: the checkume """ # NB: using adler32 & 0xffffffff is the documented way...	[ "def", "get_checksum32", "(", "oqparam", ",", "hazard", "=", "False", ")", ":", "# NB: using adler32 & 0xffffffff is the documented way to get a checksum", "# which is the same between Python 2 and Python 3", "checksum", "=", "0", "for", "fname", "in", "get_input_files", "(", ...	46.607143	0.000751
def _get(self): """get and parse data stored in self.path.""" data, stat = self.zk.get(self.path) if not len(data): return {}, stat.version if self.OLD_SEPARATOR in data: return self._get_old() return json.loads(data), stat.version	[ "def", "_get", "(", "self", ")", ":", "data", ",", "stat", "=", "self", ".", "zk", ".", "get", "(", "self", ".", "path", ")", "if", "not", "len", "(", "data", ")", ":", "return", "{", "}", ",", "stat", ".", "version", "if", "self", ".", "OLD_...	32	0.006757
def create_configuration(name='Base'): """Create a configuration base class It is built using :class:`ConfigurationMeta`. Subclassing such a base class will register exposed methods .. class:: Base .. attribute:: configuration Configuration dict that can be used by a Router or th...	[ "def", "create_configuration", "(", "name", "=", "'Base'", ")", ":", "@", "classmethod", "def", "register", "(", "cls", ",", "element", ",", "action", ",", "method", ")", ":", "if", "not", "action", "in", "cls", ".", "configuration", ":", "cls", ".", "...	37.7	0.00431
def add_jenkins_job_options(parser): """Add a new job to Jenkins for updating chef-repo :rtype: argparse.ArgumentParser """ cookbook = parser.add_parser('jenkins', help='Add a new cookbook job to ' 'Jenkins') cookbook.add_argument('jenkins', action=...	[ "def", "add_jenkins_job_options", "(", "parser", ")", ":", "cookbook", "=", "parser", ".", "add_parser", "(", "'jenkins'", ",", "help", "=", "'Add a new cookbook job to '", "'Jenkins'", ")", "cookbook", ".", "add_argument", "(", "'jenkins'", ",", "action", "=", ...	47	0.000772
def initialize_hashes(self): """Create new hashlib objects for each hash we are going to calculate.""" if ('md5' in self.hashes): self.md5_calc = hashlib.md5() if ('sha-1' in self.hashes): self.sha1_calc = hashlib.sha1() if ('sha-256' in self.hashes): ...	[ "def", "initialize_hashes", "(", "self", ")", ":", "if", "(", "'md5'", "in", "self", ".", "hashes", ")", ":", "self", ".", "md5_calc", "=", "hashlib", ".", "md5", "(", ")", "if", "(", "'sha-1'", "in", "self", ".", "hashes", ")", ":", "self", ".", ...	43.5	0.008451
def populate(self, priority, address, rtr, data): """ :return: None """ assert isinstance(data, bytes) self.needs_low_priority(priority) self.needs_no_rtr(rtr) self.needs_data(data, 3) self.transmit_error_counter = data[0] self.receive_error_counte...	[ "def", "populate", "(", "self", ",", "priority", ",", "address", ",", "rtr", ",", "data", ")", ":", "assert", "isinstance", "(", "data", ",", "bytes", ")", "self", ".", "needs_low_priority", "(", "priority", ")", "self", ".", "needs_no_rtr", "(", "rtr", ...	32.727273	0.005405
def username(proxy=None): ''' Return the username. .. versionadded:: 2017.7.0 CLI Example - select all devices using `foobar` as username for connection: .. code-block:: bash salt -G 'username:foobar' test.ping Output: .. code-block::yaml device1: True ...	[ "def", "username", "(", "proxy", "=", "None", ")", ":", "if", "proxy", "and", "salt", ".", "utils", ".", "napalm", ".", "is_proxy", "(", "__opts__", ")", ":", "# only if proxy will override the username", "# otherwise will use the default Salt grains", "return", "{"...	22.56	0.001701
def save_html_with_metadata(fig, filename, fig_kwds, kwds): """ Save a html output to file with metadata """ if isinstance(fig, str): text = fig else: from mpld3 import fig_to_html text = fig_to_html(fig, **fig_kwds) f = open(filename, 'w') for key, value in kwds.items(): ...	[ "def", "save_html_with_metadata", "(", "fig", ",", "filename", ",", "fig_kwds", ",", "kwds", ")", ":", "if", "isinstance", "(", "fig", ",", "str", ")", ":", "text", "=", "fig", "else", ":", "from", "mpld3", "import", "fig_to_html", "text", "=", "fig_to_h...	31.866667	0.004065
def fromordinal(cls, ordinal): """Return the week corresponding to the proleptic Gregorian ordinal, where January 1 of year 1 starts the week with ordinal 1. """ if ordinal < 1: raise ValueError("ordinal must be >= 1") return super(Week, cls).__new__(cls, *(date.fromo...	[ "def", "fromordinal", "(", "cls", ",", "ordinal", ")", ":", "if", "ordinal", "<", "1", ":", "raise", "ValueError", "(", "\"ordinal must be >= 1\"", ")", "return", "super", "(", "Week", ",", "cls", ")", ".", "__new__", "(", "cls", ",", "*", "(", "date",...	51.571429	0.008174
def write_grid_tpl(self,name,tpl_file,zn_array): """ write a template file a for grid-based multiplier parameters Parameters ---------- name : str the base parameter name tpl_file : str the template file to write zn_array : numpy.ndarray ...	[ "def", "write_grid_tpl", "(", "self", ",", "name", ",", "tpl_file", ",", "zn_array", ")", ":", "parnme", ",", "x", ",", "y", "=", "[", "]", ",", "[", "]", ",", "[", "]", "with", "open", "(", "os", ".", "path", ".", "join", "(", "self", ".", "...	38	0.01796
def get_outcome_for_state_name(self, name): """ Returns the final outcome of the child state specified by name. Note: This is utility function that is used by the programmer to make a decision based on the final outcome of its child states. A state is not uniquely specified by the name, but as ...	[ "def", "get_outcome_for_state_name", "(", "self", ",", "name", ")", ":", "return_value", "=", "None", "for", "state_id", ",", "name_outcome_tuple", "in", "self", ".", "final_outcomes_dict", ".", "items", "(", ")", ":", "if", "name_outcome_tuple", "[", "0", "]"...	48.25	0.005083
def _create_skt(self): ''' Create the authentication socket. ''' log.debug('Creating the auth socket') if ':' in self.auth_address: self.socket = socket.socket(socket.AF_INET6, socket.SOCK_STREAM) else: self.socket = socket.socket(socket.AF_INET, s...	[ "def", "_create_skt", "(", "self", ")", ":", "log", ".", "debug", "(", "'Creating the auth socket'", ")", "if", "':'", "in", "self", ".", "auth_address", ":", "self", ".", "socket", "=", "socket", ".", "socket", "(", "socket", ".", "AF_INET6", ",", "sock...	43.666667	0.004484
def most_common(self, n=None): '''List the n most common elements and their counts from the most common to the least. If n is None, then list all element counts. >>> Counter('abcdeabcdabcaba').most_common(3) [('a', 5), ('b', 4), ('c', 3)] ''' # Emulate Bag.sortedByCoun...	[ "def", "most_common", "(", "self", ",", "n", "=", "None", ")", ":", "# Emulate Bag.sortedByCount from Smalltalk", "if", "n", "is", "None", ":", "return", "sorted", "(", "self", ".", "items", "(", ")", ",", "key", "=", "_itemgetter", "(", "1", ")", ",", ...	40.75	0.004
def block_view(arr, block=(3, 3)): """Provide a 2D block view to 2D array. No error checking made. Therefore meaningful (as implemented) only for blocks strictly compatible with the shape of A. """ # simple shape and strides computations may seem at first strange # unless one is able to recog...	[ "def", "block_view", "(", "arr", ",", "block", "=", "(", "3", ",", "3", ")", ")", ":", "# simple shape and strides computations may seem at first strange", "# unless one is able to recognize the 'tuple additions' involved ;-)", "shape", "=", "(", "arr", ".", "shape", "[",...	42.538462	0.00354
def patch_namespaced_limit_range(self, name, namespace, body, **kwargs): # noqa: E501 """patch_namespaced_limit_range # noqa: E501 partially update the specified LimitRange # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, ple...	[ "def", "patch_namespaced_limit_range", "(", "self", ",", "name", ",", "namespace", ",", "body", ",", "", "", "kwargs", ")", ":", "# noqa: E501", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'async_req'", ")...	61.36	0.001284
def compute_node_sizes(self): """Compute the node sizes.""" if type(self.node_size) is str: nodes = self.graph.nodes self.node_sizes = [nodes[n][self.node_size] for n in self.nodes] else: self.node_sizes = self.node_size	[ "def", "compute_node_sizes", "(", "self", ")", ":", "if", "type", "(", "self", ".", "node_size", ")", "is", "str", ":", "nodes", "=", "self", ".", "graph", ".", "nodes", "self", ".", "node_sizes", "=", "[", "nodes", "[", "n", "]", "[", "self", ".",...	39.142857	0.007143
def residue_distances(res_1_num, res_1_chain, res_2_num, res_2_chain, model): """Distance between the last atom of 2 residues""" res1 = model[res_1_chain][res_1_num].child_list[-1] res2 = model[res_2_chain][res_2_num].child_list[-1] distance = res1 - res2 return distance	[ "def", "residue_distances", "(", "res_1_num", ",", "res_1_chain", ",", "res_2_num", ",", "res_2_chain", ",", "model", ")", ":", "res1", "=", "model", "[", "res_1_chain", "]", "[", "res_1_num", "]", ".", "child_list", "[", "-", "1", "]", "res2", "=", "mod...	35.75	0.003413
def slice_cardinal(self, key): """ Slice the container according to its (primary) cardinal axis. The "cardinal" axis can have any name so long as the name matches a data object attached to the container. The index name for this object should also match the value of the cardinal ...	[ "def", "slice_cardinal", "(", "self", ",", "key", ")", ":", "if", "self", ".", "_cardinal", ":", "cls", "=", "self", ".", "__class__", "key", "=", "check_key", "(", "self", "[", "self", ".", "_cardinal", "]", ",", "key", ",", "cardinal", "=", "True",...	50.213115	0.004163
def check(code): """Checks code for obvious errors.""" def safe_lookup(op): try: return instructions.lookup(op) except Exception: return op for i, a in enumerate(code): b = code[i+1] if i+1 < len(code) else None # Does instruction exist? if n...	[ "def", "check", "(", "code", ")", ":", "def", "safe_lookup", "(", "op", ")", ":", "try", ":", "return", "instructions", ".", "lookup", "(", "op", ")", "except", "Exception", ":", "return", "op", "for", "i", ",", "a", "in", "enumerate", "(", "code", ...	34.27027	0.005368
def generate_rest_view(config, model_cls, attrs=None, es_based=True, attr_view=False, singular=False): """ Generate REST view for a model class. :param model_cls: Generated DB model class. :param attr: List of strings that represent names of view methods, new generated view s...	[ "def", "generate_rest_view", "(", "config", ",", "model_cls", ",", "attrs", "=", "None", ",", "es_based", "=", "True", ",", "attr_view", "=", "False", ",", "singular", "=", "False", ")", ":", "valid_attrs", "=", "(", "list", "(", "collection_methods", ".",...	37.844444	0.000572
def convert_formula_to_atomic_fractions(formula): """ Converts a chemical formula to an atomic fraction :class:`dict`. Args: formula (str): chemical formula, like Al2O3. No wildcard are accepted. """ mole_fractions = {} total_mole_fraction = 0.0 for match in CHEMICAL_FORMULA_PATTER...	[ "def", "convert_formula_to_atomic_fractions", "(", "formula", ")", ":", "mole_fractions", "=", "{", "}", "total_mole_fraction", "=", "0.0", "for", "match", "in", "CHEMICAL_FORMULA_PATTERN", ".", "finditer", "(", "formula", ")", ":", "symbol", ",", "mole_fraction", ...	29.896552	0.001117
def copy_to_temp(object): """ Copy file-like object to temp file and return path. """ temp_file = NamedTemporaryFile(delete=False) _copy_and_close(object, temp_file) return temp_file.name	[ "def", "copy_to_temp", "(", "object", ")", ":", "temp_file", "=", "NamedTemporaryFile", "(", "delete", "=", "False", ")", "_copy_and_close", "(", "object", ",", "temp_file", ")", "return", "temp_file", ".", "name" ]	26	0.004651
def send(self, cmd, timeout, wait_for_string, password): """Send command to the target device.""" return self.target_device.send(cmd, timeout=timeout, wait_for_string=wait_for_string, password=password)	[ "def", "send", "(", "self", ",", "cmd", ",", "timeout", ",", "wait_for_string", ",", "password", ")", ":", "return", "self", ".", "target_device", ".", "send", "(", "cmd", ",", "timeout", "=", "timeout", ",", "wait_for_string", "=", "wait_for_string", ",",...	72	0.013761
async def wind_type_classe(self): """Retrieve translation for wind type.""" data = await self.retrieve(url=API_WIND_TYPE) self.wind_type = dict() for _type in data['data']: self.wind_type[int(_type['classWindSpeed'])] = _type['descClassWindSpeedDailyPT'] return se...	[ "async", "def", "wind_type_classe", "(", "self", ")", ":", "data", "=", "await", "self", ".", "retrieve", "(", "url", "=", "API_WIND_TYPE", ")", "self", ".", "wind_type", "=", "dict", "(", ")", "for", "_type", "in", "data", "[", "'data'", "]", ":", "...	29.272727	0.009036
def get_document_field_display(self, field_name, field): """ Render a link to a document """ document = getattr(self.instance, field_name) if document: return mark_safe( '<a href="%s">%s <span class="meta">(%s, %s)</span></a>' % ( document.url, ...	[ "def", "get_document_field_display", "(", "self", ",", "field_name", ",", "field", ")", ":", "document", "=", "getattr", "(", "self", ".", "instance", ",", "field_name", ")", "if", "document", ":", "return", "mark_safe", "(", "'<a href=\"%s\">%s <span class=\"meta...	41.461538	0.00363
def forwards(self, orm): "Write your forwards methods here." for tag in orm['tagging.Tag'].objects.all(): if tag.tagtitle_set.all().count() == 0: orm['tagging_translated.TagTitle'].objects.create( trans_name=tag.name, tag=tag, language='en')	[ "def", "forwards", "(", "self", ",", "orm", ")", ":", "for", "tag", "in", "orm", "[", "'tagging.Tag'", "]", ".", "objects", ".", "all", "(", ")", ":", "if", "tag", ".", "tagtitle_set", ".", "all", "(", ")", ".", "count", "(", ")", "==", "0", ":...	50	0.006557
def set_bg_data(self, bg_data, which_data=None): """Set background amplitude and phase data Parameters ---------- bg_data: 2d ndarray (float or complex), list, QPImage, or `None` The background data (must be same type as `data`). If set to `None`, the background ...	[ "def", "set_bg_data", "(", "self", ",", "bg_data", ",", "which_data", "=", "None", ")", ":", "if", "isinstance", "(", "bg_data", ",", "QPImage", ")", ":", "if", "which_data", "is", "not", "None", ":", "msg", "=", "\"`which_data` must not be set if `bg_data` is...	43.827586	0.00154
def _create_das_mapping(self): """ das_map = {'lookup' : [{params : {'param1' : 'required', 'param2' : 'optional', 'param3' : 'default_value' ...}, url : 'https://cmsweb.cern.ch:8443/dbs/prod/global/DBSReader/acquisitioneras/', das_map : {'...	[ "def", "_create_das_mapping", "(", "self", ")", ":", "with", "open", "(", "self", ".", "_mapfile", ",", "'r'", ")", "as", "f", ":", "for", "entry", "in", "yaml", ".", "load_all", "(", "f", ")", ":", "das2dbs_param_map", "=", "{", "}", "if", "'lookup'...	54.75	0.010772
def get_rightmost_index(byte_index=0, file_starts=[0]): ''' Retrieve the highest-indexed file that starts at or before byte_index. ''' i = 1 while i <= len(file_starts): start = file_starts[-i] if start <= byte_index: return len(file_starts) - i else: ...	[ "def", "get_rightmost_index", "(", "byte_index", "=", "0", ",", "file_starts", "=", "[", "0", "]", ")", ":", "i", "=", "1", "while", "i", "<=", "len", "(", "file_starts", ")", ":", "start", "=", "file_starts", "[", "-", "i", "]", "if", "start", "<=...	27.785714	0.002488
def drawQuad(self, quad): """Draw a Quad. """ q = Quad(quad) return self.drawPolyline([q.ul, q.ll, q.lr, q.ur, q.ul])	[ "def", "drawQuad", "(", "self", ",", "quad", ")", ":", "q", "=", "Quad", "(", "quad", ")", "return", "self", ".", "drawPolyline", "(", "[", "q", ".", "ul", ",", "q", ".", "ll", ",", "q", ".", "lr", ",", "q", ".", "ur", ",", "q", ".", "ul", ...	29	0.013423
def symbol_targets_bottom(x, model_hparams, vocab_size): """Bottom transformation for target symbols.""" if (model_hparams.shared_embedding_and_softmax_weights or model_hparams.get("shared_embedding")): try: return _symbol_bottom_simple( x, model_hparams, vocab_size, "shared", reuse=True) ...	[ "def", "symbol_targets_bottom", "(", "x", ",", "model_hparams", ",", "vocab_size", ")", ":", "if", "(", "model_hparams", ".", "shared_embedding_and_softmax_weights", "or", "model_hparams", ".", "get", "(", "\"shared_embedding\"", ")", ")", ":", "try", ":", "return...	42.785714	0.013072
def convert_to_article(request, entry_id): """ This method converts a tip entry to an unpublished article :param entry_id: Tip entry to convert :return: redirect to the edit page of the converted tip """ def get_entry_author(entry): if not entry.optional_name: return 'By Anon...	[ "def", "convert_to_article", "(", "request", ",", "entry_id", ")", ":", "def", "get_entry_author", "(", "entry", ")", ":", "if", "not", "entry", ".", "optional_name", ":", "return", "'By Anonymous'", "return", "'By %s'", "%", "entry", ".", "optional_name", "en...	40.033333	0.000813
def cmd(send, msg, args): """Gets words of wisdom Syntax: {command} (--author <author>\|--search <topic>) Powered by STANDS4, www.stands4.com """ uid = args['config']['api']['stands4uid'] token = args['config']['api']['stands4token'] parser = arguments.ArgParser(args['config']) group = pa...	[ "def", "cmd", "(", "send", ",", "msg", ",", "args", ")", ":", "uid", "=", "args", "[", "'config'", "]", "[", "'api'", "]", "[", "'stands4uid'", "]", "token", "=", "args", "[", "'config'", "]", "[", "'api'", "]", "[", "'stands4token'", "]", "parser"...	31.591837	0.000627
def replace_pipe(self, name, component): """Replace a component in the pipeline. name (unicode): Name of the component to replace. component (callable): Pipeline component. DOCS: https://spacy.io/api/language#replace_pipe """ if name not in self.pipe_names: ...	[ "def", "replace_pipe", "(", "self", ",", "name", ",", "component", ")", ":", "if", "name", "not", "in", "self", ".", "pipe_names", ":", "raise", "ValueError", "(", "Errors", ".", "E001", ".", "format", "(", "name", "=", "name", ",", "opts", "=", "sel...	40.909091	0.006522
def parse_attribute(tokens, is_merc): """ Parse a token stream from inside an attribute selector. Enter this function after a left-bracket is found: http://www.w3.org/TR/CSS2/selector.html#attribute-selectors """ # # Local helper functions # def next_scalar(tokens, op): ...	[ "def", "parse_attribute", "(", "tokens", ",", "is_merc", ")", ":", "#", "# Local helper functions", "#", "def", "next_scalar", "(", "tokens", ",", "op", ")", ":", "\"\"\" Look for a scalar value just after an attribute selector operator.\n \"\"\"", "while", "True", ...	38.931034	0.005398
def parse_group_address(addr): """Parse KNX group addresses and return the address as an integer. This allows to convert x/x/x and x/x address syntax to a numeric KNX group address """ if addr is None: raise KNXException("No address given") res = None if re.match('[0-9]+$', addr)...	[ "def", "parse_group_address", "(", "addr", ")", ":", "if", "addr", "is", "None", ":", "raise", "KNXException", "(", "\"No address given\"", ")", "res", "=", "None", "if", "re", ".", "match", "(", "'[0-9]+$'", ",", "addr", ")", ":", "res", "=", "int", "...	26.060606	0.001121
def __calculate_score(self, index_point, index_cluster): """! @brief Calculates Silhouette score for the specific object defined by index_point. @param[in] index_point (uint): Index point from input data for which Silhouette score should be calculated. @param[in] index_cluster (uin...	[ "def", "__calculate_score", "(", "self", ",", "index_point", ",", "index_cluster", ")", ":", "difference", "=", "self", ".", "__calculate_dataset_difference", "(", "index_point", ")", "a_score", "=", "self", ".", "__calculate_within_cluster_score", "(", "index_cluster...	46.3125	0.009259
def plot_distributions(self, parameters=None, truth=None, extents=None, display=False, filename=None, chains=None, col_wrap=4, figsize=None, blind=None): # pragma: no cover """ Plots the 1D parameter distributions for verification purposes. This plot is more for a sanity or ...	[ "def", "plot_distributions", "(", "self", ",", "parameters", "=", "None", ",", "truth", "=", "None", ",", "extents", "=", "None", ",", "display", "=", "False", ",", "filename", "=", "None", ",", "chains", "=", "None", ",", "col_wrap", "=", "4", ",", ...	43.321101	0.004969
def get_gaf_gene_ontology_file(path): """Extract the gene ontology file associated with a GO annotation file. Parameters ---------- path: str The path name of the GO annotation file. Returns ------- str The URL of the associated gene ontology file. """ assert isinst...	[ "def", "get_gaf_gene_ontology_file", "(", "path", ")", ":", "assert", "isinstance", "(", "path", ",", "str", ")", "version", "=", "None", "with", "misc", ".", "smart_open_read", "(", "path", ",", "encoding", "=", "'UTF-8'", ",", "try_gzip", "=", "True", ")...	25.291667	0.003175
def is_modified_field(self, name): """ Returns whether a field is modified or not """ name = self.get_real_name(name) if name in self.__modified_data__ or name in self.__deleted_fields__: return True try: return self.get_field_value(name).is_modi...	[ "def", "is_modified_field", "(", "self", ",", "name", ")", ":", "name", "=", "self", ".", "get_real_name", "(", "name", ")", "if", "name", "in", "self", ".", "__modified_data__", "or", "name", "in", "self", ".", "__deleted_fields__", ":", "return", "True",...	28.076923	0.005305
def intersect_leaderboards(self, destination, keys, aggregate='SUM'): ''' Intersect leaderboards given by keys with this leaderboard into a named destination leaderboard. @param destination [String] Destination leaderboard name. @param keys [Array] Leaderboards to be merged with the cur...	[ "def", "intersect_leaderboards", "(", "self", ",", "destination", ",", "keys", ",", "aggregate", "=", "'SUM'", ")", ":", "keys", ".", "insert", "(", "0", ",", "self", ".", "leaderboard_name", ")", "self", ".", "redis_connection", ".", "zinterstore", "(", "...	53.1	0.007407
def custom_to_radec(phi1,phi2,T=None,degree=False): """ NAME: custom_to_radec PURPOSE: rotate a custom set of sky coordinates (phi1, phi2) to (ra, dec) given the rotation matrix T for (ra, dec) -> (phi1, phi2) INPUT: phi1 - custom sky coord phi2 - custom sky c...	[ "def", "custom_to_radec", "(", "phi1", ",", "phi2", ",", "T", "=", "None", ",", "degree", "=", "False", ")", ":", "if", "T", "is", "None", ":", "raise", "ValueError", "(", "\"Must set T= for custom_to_radec\"", ")", "return", "radec_to_custom", "(", "phi1", ...	23.484848	0.006196
def menuitemenabled(self, window_name, object_name): """ Verify a menu item is enabled @param window_name: Window name to look for, either full name, LDTP's name convention, or a Unix glob. @type window_name: string @param object_name: Object name to look for, either ful...	[ "def", "menuitemenabled", "(", "self", ",", "window_name", ",", "object_name", ")", ":", "try", ":", "menu_handle", "=", "self", ".", "_get_menu_handle", "(", "window_name", ",", "object_name", ",", "False", ")", "if", "menu_handle", ".", "AXEnabled", ":", "...	34.045455	0.002597
def _get_warped_mean(self, mean, std, pred_init=None, deg_gauss_hermite=20): """ Calculate the warped mean by using Gauss-Hermite quadrature. """ gh_samples, gh_weights = np.polynomial.hermite.hermgauss(deg_gauss_hermite) gh_samples = gh_samples[:, None] gh_weights = gh_w...	[ "def", "_get_warped_mean", "(", "self", ",", "mean", ",", "std", ",", "pred_init", "=", "None", ",", "deg_gauss_hermite", "=", "20", ")", ":", "gh_samples", ",", "gh_weights", "=", "np", ".", "polynomial", ".", "hermite", ".", "hermgauss", "(", "deg_gauss_...	52.625	0.009346
def lowPassFilter(self, threshold): ''' remove all high frequencies by setting boundary around a quarry in the middle of the size (2*threshold)^2 to zero threshold = 0...1 ''' if not threshold: return rows, cols = self.img.shape tx = i...	[ "def", "lowPassFilter", "(", "self", ",", "threshold", ")", ":", "if", "not", "threshold", ":", "return", "rows", ",", "cols", "=", "self", ".", "img", ".", "shape", "tx", "=", "int", "(", "cols", "", "threshold", "", "0.25", ")", "ty", "=", "int...	32.368421	0.004739
def process_input_line(self, line, store_history=True): """process the input, capturing stdout""" #print "input='%s'"%self.input stdout = sys.stdout splitter = self.IP.input_splitter try: sys.stdout = self.cout splitter.push(line) more = splitt...	[ "def", "process_input_line", "(", "self", ",", "line", ",", "store_history", "=", "True", ")", ":", "#print \"input='%s'\"%self.input", "stdout", "=", "sys", ".", "stdout", "splitter", "=", "self", ".", "IP", ".", "input_splitter", "try", ":", "sys", ".", "s...	38.357143	0.005455
def get_prefix_dir(archive): """ Often, all files are in a single directory. If so, they'll all have the same prefix. Determine any such prefix. archive is a ZipFile """ names = archive.namelist() shortest_name = sorted(names, key=len)[0] candidate_prefixes = [ shortest_name[:len...	[ "def", "get_prefix_dir", "(", "archive", ")", ":", "names", "=", "archive", ".", "namelist", "(", ")", "shortest_name", "=", "sorted", "(", "names", ",", "key", "=", "len", ")", "[", "0", "]", "candidate_prefixes", "=", "[", "shortest_name", "[", ":", ...	31.75	0.001912
def get_event_public_discount(self, id, discount_id, **data): """ GET /events/:id/public_discounts/:discount_id/ Gets a public :format:`discount` by ID as the key ``discount``. """ return self.get("/events/{0}/public_discounts/{0}/".format(id,discount_id), data=data)	[ "def", "get_event_public_discount", "(", "self", ",", "id", ",", "discount_id", ",", "", "", "data", ")", ":", "return", "self", ".", "get", "(", "\"/events/{0}/public_discounts/{0}/\"", ".", "format", "(", "id", ",", "discount_id", ")", ",", "data", "=", ...	44.285714	0.015823

def get(self, sid): """ Constructs a IncomingPhoneNumberContext :param sid: The unique string that identifies the resource :returns: twilio.rest.api.v2010.account.incoming_phone_number.IncomingPhoneNumberContext :rtype: twilio.rest.api.v2010.account.incoming_phone_number.Incomi...

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def to_json(self): """Convert the Design Day to a dictionary.""" return { 'location': self.location.to_json(), 'design_days': [des_d.to_json() for des_d in self.design_days] }

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def process_op(self, rc, nbytes, overlap): """ Handles the possible completion or re-queueing if conditions haven't been met (the `complete` callable returns false) of a overlapped request. """ act = overlap.object overlap.object = None if act in self.token...

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def deprecated(message): """The decorator to mark deprecated functions.""" from traceback import extract_stack assert message, "`message` argument in @deprecated is required." def deprecated_decorator(fun): def decorator_invisible(*args, **kwargs): stack = extract_stack() ...

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def infer_declared_from_conditions(conds, namespace=None): ''' like infer_declared except that it is passed a set of first party caveat conditions as a list of string rather than a set of macaroons. ''' conflicts = [] # If we can't resolve that standard namespace, then we'll look for # just bare...

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def repstring_penalty(reps, intensities, desired_reps, desired_intensity, minimum_rep): """Penalty function which calculates how "bad" a set of reps and intensities is, compared to the desired repetitions, the desired intensity level and the minimum repetitions. ...

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def check_thresholds(self, service=None, use_ta=True): """ Check all limits and current usage against their specified thresholds; return all :py:class:`~.AwsLimit` instances that have crossed one or more of their thresholds. If ``service`` is specified, the returned dict has one...

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def close(self): """Stops accepting new connections, cancels all currently running requests. Request handlers are able to handle `CancelledError` and exit properly. """ if self._server is None: raise RuntimeError('Server is not started') self._server.close() ...

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37.6

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def fit_transform(self, features, class_labels): """Convenience function that fits the provided data then constructs a new feature from the provided features. Parameters ---------- features: array-like {n_samples, n_features} Feature matrix class_labels: array-like {...

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32.333333

0.005008

def TransformedRandomVariable(random_variable, # pylint: disable=invalid-name reversible_layer, name=None, sample_shape=(), value=None): """Random variable for f(x), where x ~ p(x) and f is reversi...

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48.75

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def link_pantsrefs(soups, precomputed): """Transorm soups: <a pantsref="foo"> becomes <a href="../foo_page.html#foo">""" for (page, soup) in soups.items(): for a in soup.find_all('a'): if not a.has_attr('pantsref'): continue pantsref = a['pantsref'] if not pantsref in precomputed.pants...

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def dataReceived(self, data): """ Parses chunks of bytes into responses. Whenever a complete response is received, this method extracts its payload and calls L{responseReceived} to process it. @param data: A chunk of data representing a (possibly partial) response @type...

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def negative_directional_movement(high_data, low_data): """ Negative Directional Movement (-DM). -DM: if DWNMOVE > UPMOVE and DWNMOVE > 0 then -DM = DWNMOVE else -Dm = 0 """ catch_errors.check_for_input_len_diff(high_data, low_data) up_moves = calculate_up_moves(high_data) down_moves = cal...

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def _get_sg_ids(self): """Get IDs for all defined security groups. Returns: list: security group IDs for all lambda_extras """ try: lambda_extras = self.settings['security_groups']['lambda_extras'] except KeyError: lambda_extras = [] ...

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33.647059

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def interp(self): """Interpolation type of this discretization.""" if self.ndim == 0: return 'nearest' elif all(interp == self.interp_byaxis[0] for interp in self.interp_byaxis): return self.interp_byaxis[0] else: return self.interp_by...

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35.111111

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def getContent(self): """ Returns: str: Content of tag (everything between `opener` and `endtag`). """ if not self.isTag() and self._element: return self._element if not self.childs: return "" output = "" for c in self.childs:...

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def _GetReportService(self): """Lazily initializes a report service client.""" if not self._report_service: self._report_service = self._ad_manager_client.GetService( 'ReportService', self._version, self._server) return self._report_service

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def inverse_deriv(self, z): """ Derivative of the inverse of the power transform Parameters ---------- z : array-like `z` is usually the linear predictor for a GLM or GEE model. Returns ------- g^(-1)'(z) : array The value of the ...

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28.1875

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def put(self, _url, **kwargs): """ This will perform a manual PUT request where the user will supply the sub_url and request params (URN) The connections class will add the base_uri and authentication credentials. PUT requests create data on the server :param _ur...

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43.3125

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def new(params, event_shape=(), validate_args=False, name=None): """Create the distribution instance from a `params` vector.""" with tf.compat.v1.name_scope(name, 'IndependentPoisson', [params, event_shape]): params = tf.convert_to_tensor(value=params, name='params') ...

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44.35

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def _appendGuideline(self, position, angle, name=None, color=None, identifier=None, **kwargs): """ position will be a valid position (x, y). angle will be a valid angle. name will be a valid guideline name or None. color will be a valid color or None . identifier will be ...

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37.384615

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def _from_arrays(self, x, y, z): """ Create VTK structured grid directly from numpy arrays. Parameters ---------- x : np.ndarray Position of the points in x direction. y : np.ndarray Position of the points in y direction. z : np.ndarray ...

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def _preconditions_snapshots_postconditions(checker: Callable) -> _PrePostSnaps: """Collect the preconditions, snapshots and postconditions from a contract checker of a function.""" preconditions = getattr(checker, "__preconditions__", []) # type: List[List[icontract._Contract]] assert all(isinstance(prec...

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57.35

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def load(cls, build_file, name, target_aliases): """A BuildFileManipulator factory class method. Note that BuildFileManipulator requires a very strict formatting of target declaration. In particular, it wants to see a newline after `target_type(`, `dependencies = [`, and the last param to the target co...

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def encrypt_binary(self, binary, *args, **kwargs): """ input: bytes, output: bytes """ return self.encrypt(binary, *args, **kwargs)

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def schedule(self, materials=None, variables=None, secure_variables=None): """ Scheduling allows user to trigger a specific pipeline. :param materials: material revisions to use. :param variables: environment variables to set. :param secure_variables: secure environment variable...

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37.333333

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def get_remote_file(self, remote_path, local_path): """Fetch remote File. :param remote_path: remote path :param local_path: local path """ sftp_client = self.transport.open_sftp_client() LOG.debug('Get the remote file. ' 'Source=%(src)s. Target=%(targe...

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38.6875

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def getDueDate(self): """Used to populate getDueDate index and metadata. This calculates the difference between the time the analysis processing started and the maximum turnaround time. If the analysis has no turnaround time set or is not yet ready for proces, returns None """ ...

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32.377778

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def store(hdu,dbase='cfeps',duser='cfhls',dtype='MYSQL',table='source'): """Write the contents of a MOP data structure to a SQL table""" import MOPdbaccess db=MOPdbaccess.connect(dbase,duser,dbSystem=dtype) dbc=db.cursor() ### INSERT THE 'HEADER' in the meta-data table file_id=hdu['header']['i...

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33.784314

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def date_time_this_century( self, before_now=True, after_now=False, tzinfo=None): """ Gets a DateTime object for the current century. :param before_now: include days in current century before today :param after_now: include days in current...

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def merkle(hashes, hash_f=double_sha256): """Take a list of hashes, and return the root merkle hash.""" while len(hashes) > 1: hashes = merkle_pair(hashes, hash_f) return hashes[0]

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def html(self) -> str: """Get whole html representation of this node.""" if self._inner_element: return self.start_tag + self._inner_element.html + self.end_tag return super().html

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def ensure_unicode_string(obj): """ Return a unicode string representation of the given obj. :param obj: The obj we want to represent in unicode :type obj: varies :rtype: `unicode` """ try: return unicode_type(obj) except UnicodeDecodeError: if ha...

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def connect(self, sid, namespace): """Register a client connection to a namespace.""" self.enter_room(sid, namespace, None) self.enter_room(sid, namespace, sid)

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def modify_member(row, key, value): ''' properly modifies a dict or class attribute ''' (target, tkey, tvalue) = dict_crawl(row, key) if target: target[tkey] = value return row

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def update_summary(self, w): """Update summary. The new summary is a weighted average of reviews i.e. .. math:: \\frac{\\sum_{r \\in R} \\mbox{weight}(r) \\times \\mbox{review}(r)} {\\sum_{r \\in R} \\mbox{weight}(r)}, where :math:`R` is a set of reviewers...

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def start_app_and_connect(self): """Overrides superclass.""" # Check that sl4a is installed out = self._adb.shell('pm list package') if not utils.grep('com.googlecode.android_scripting', out): raise jsonrpc_client_base.AppStartError( self._ad, '%s is not insta...

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def auto_argparser(description=None): """Generate argparser from config file automatically (experimental) """ partial_parser = ArgumentParser(description=description) partial_parser.add_argument('config', help='config file path') cfg_file = partial_parser.parse_known_args()[0].co...

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def addModel(D, models): """ Insert model data into a LiPD dataset Examples of model naming: chron0model0 chron0model1 chron1model0 Example of 'models' variable: { chron0model0: { "method": {...}, "summaryTable": [...], ...

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def add_environment_information(meta): """Record environment information.""" meta["timestamp"] = datetime.utcnow().isoformat(" ") meta["platform"] = platform.system() meta["release"] = platform.release() meta["python"] = platform.python_version() meta["packages"] = get_pk...

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def to_dict(self, delimiter=DEFAULT_DELIMITER, dict_type=collections.OrderedDict): """ Get the dictionary representation of the current parser. :param str delimiter: The delimiter used for nested dictionaries, defaults to ":", optional :param class dict_type: The dictionary type to ...

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def enter(self): """Send a StartRequest.""" self._communication.send(StartRequest, self._communication.left_end_needle, self._communication.right_end_needle)

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def update_ssl_termination(self, loadbalancer, securePort=None, enabled=None, secureTrafficOnly=None): """ Updates existing SSL termination information for the load balancer without affecting the existing certificates/keys. """ return loadbalancer.update_ssl_terminati...

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def line_oriented(cls, line_oriented_options, console): """Given Goal.Options and a Console, yields functions for writing to stdout and stderr, respectively. The passed options instance will generally be the `Goal.Options` of a `LineOriented` `Goal`. """ if type(line_oriented_options) != cls.Options: ...

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def get_auth_token(self, user_payload): """ Extracts token from the `user_payload` """ token = user_payload.get('token') or None if not token: raise ValueError('`user_payload` must provide api token') return '{auth_header_prefix} {token}'.format( ...

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def plot_iso(axis, step, var): """Plot isocontours of scalar field. Args: axis (:class:`matplotlib.axes.Axes`): the axis handler of an existing matplotlib figure where the isocontours should be plotted. step (:class:`~stagpy.stagyydata._Step`): a step of a StagyyData ...

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def _select_sql(self, **kwargs): """ Overridden function to generate the SELECT part of the SQL statement, with the addition of the a modifier if present. """ return 'SELECT {distinct}{modifier}{select}'.format( distinct='DISTINCT ' if self._distinct else '', ...

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def _reaction_cartesion_expansion_unqualified_helper( graph: BELGraph, u: BaseEntity, v: BaseEntity, d: dict, ) -> None: """Helper to deal with cartension expansion in unqualified edges.""" if isinstance(u, Reaction) and isinstance(v, Reaction): enzymes = _get_catalysts_i...

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def build(tasks, worker_scheduler_factory=None, detailed_summary=False, **env_params): """ Run internally, bypassing the cmdline parsing. Useful if you have some luigi code that you want to run internally. Example: .. code-block:: python luigi.build([MyTask1(), MyTask2()], local_scheduler...

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def _update_known_atts(self, **kwargs): """Updates instance attributes with supplied keyword arguments. """ for k, v in kwargs.items(): if k not in ATTR_KEYS: # Warn if passed in unknown kwargs raise SyntaxWarning('Unknown argument: {}'.format(k)) ...

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def plot_neuron_on_density(population, # pylint: disable=too-many-arguments bins=100, new_fig=True, subplot=111, levels=None, plane='xy', colorlabel='Nodes per unit area', labelfontsize=16, color_map='Reds', no_colorbar=False, threshold=0....

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def get_checksum32(oqparam, hazard=False): """ Build an unsigned 32 bit integer from the input files of a calculation. :param oqparam: an OqParam instance :param hazard: if True, consider only the hazard files :returns: the checkume """ # NB: using adler32 & 0xffffffff is the documented way...

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def _get(self): """get and parse data stored in self.path.""" data, stat = self.zk.get(self.path) if not len(data): return {}, stat.version if self.OLD_SEPARATOR in data: return self._get_old() return json.loads(data), stat.version

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def create_configuration(name='Base'): """Create a configuration base class It is built using :class:`ConfigurationMeta`. Subclassing such a base class will register exposed methods .. class:: Base .. attribute:: configuration Configuration dict that can be used by a Router or th...

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def add_jenkins_job_options(parser): """Add a new job to Jenkins for updating chef-repo :rtype: argparse.ArgumentParser """ cookbook = parser.add_parser('jenkins', help='Add a new cookbook job to ' 'Jenkins') cookbook.add_argument('jenkins', action=...

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def initialize_hashes(self): """Create new hashlib objects for each hash we are going to calculate.""" if ('md5' in self.hashes): self.md5_calc = hashlib.md5() if ('sha-1' in self.hashes): self.sha1_calc = hashlib.sha1() if ('sha-256' in self.hashes): ...

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def populate(self, priority, address, rtr, data): """ :return: None """ assert isinstance(data, bytes) self.needs_low_priority(priority) self.needs_no_rtr(rtr) self.needs_data(data, 3) self.transmit_error_counter = data[0] self.receive_error_counte...

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def username(proxy=None): ''' Return the username. .. versionadded:: 2017.7.0 CLI Example - select all devices using `foobar` as username for connection: .. code-block:: bash salt -G 'username:foobar' test.ping Output: .. code-block::yaml device1: True ...

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def save_html_with_metadata(fig, filename, fig_kwds, kwds): """ Save a html output to file with metadata """ if isinstance(fig, str): text = fig else: from mpld3 import fig_to_html text = fig_to_html(fig, **fig_kwds) f = open(filename, 'w') for key, value in kwds.items(): ...

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def fromordinal(cls, ordinal): """Return the week corresponding to the proleptic Gregorian ordinal, where January 1 of year 1 starts the week with ordinal 1. """ if ordinal < 1: raise ValueError("ordinal must be >= 1") return super(Week, cls).__new__(cls, *(date.fromo...

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def write_grid_tpl(self,name,tpl_file,zn_array): """ write a template file a for grid-based multiplier parameters Parameters ---------- name : str the base parameter name tpl_file : str the template file to write zn_array : numpy.ndarray ...

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def get_outcome_for_state_name(self, name): """ Returns the final outcome of the child state specified by name. Note: This is utility function that is used by the programmer to make a decision based on the final outcome of its child states. A state is not uniquely specified by the name, but as ...

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def _create_skt(self): ''' Create the authentication socket. ''' log.debug('Creating the auth socket') if ':' in self.auth_address: self.socket = socket.socket(socket.AF_INET6, socket.SOCK_STREAM) else: self.socket = socket.socket(socket.AF_INET, s...

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def most_common(self, n=None): '''List the n most common elements and their counts from the most common to the least. If n is None, then list all element counts. >>> Counter('abcdeabcdabcaba').most_common(3) [('a', 5), ('b', 4), ('c', 3)] ''' # Emulate Bag.sortedByCoun...

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def block_view(arr, block=(3, 3)): """Provide a 2D block view to 2D array. No error checking made. Therefore meaningful (as implemented) only for blocks strictly compatible with the shape of A. """ # simple shape and strides computations may seem at first strange # unless one is able to recog...

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def patch_namespaced_limit_range(self, name, namespace, body, **kwargs): # noqa: E501 """patch_namespaced_limit_range # noqa: E501 partially update the specified LimitRange # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, ple...

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def compute_node_sizes(self): """Compute the node sizes.""" if type(self.node_size) is str: nodes = self.graph.nodes self.node_sizes = [nodes[n][self.node_size] for n in self.nodes] else: self.node_sizes = self.node_size

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def residue_distances(res_1_num, res_1_chain, res_2_num, res_2_chain, model): """Distance between the last atom of 2 residues""" res1 = model[res_1_chain][res_1_num].child_list[-1] res2 = model[res_2_chain][res_2_num].child_list[-1] distance = res1 - res2 return distance

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def slice_cardinal(self, key): """ Slice the container according to its (primary) cardinal axis. The "cardinal" axis can have any name so long as the name matches a data object attached to the container. The index name for this object should also match the value of the cardinal ...

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def check(code): """Checks code for obvious errors.""" def safe_lookup(op): try: return instructions.lookup(op) except Exception: return op for i, a in enumerate(code): b = code[i+1] if i+1 < len(code) else None # Does instruction exist? if n...

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def generate_rest_view(config, model_cls, attrs=None, es_based=True, attr_view=False, singular=False): """ Generate REST view for a model class. :param model_cls: Generated DB model class. :param attr: List of strings that represent names of view methods, new generated view s...

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def convert_formula_to_atomic_fractions(formula): """ Converts a chemical formula to an atomic fraction :class:`dict`. Args: formula (str): chemical formula, like Al2O3. No wildcard are accepted. """ mole_fractions = {} total_mole_fraction = 0.0 for match in CHEMICAL_FORMULA_PATTER...

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def copy_to_temp(object): """ Copy file-like object to temp file and return path. """ temp_file = NamedTemporaryFile(delete=False) _copy_and_close(object, temp_file) return temp_file.name

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def send(self, cmd, timeout, wait_for_string, password): """Send command to the target device.""" return self.target_device.send(cmd, timeout=timeout, wait_for_string=wait_for_string, password=password)

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async def wind_type_classe(self): """Retrieve translation for wind type.""" data = await self.retrieve(url=API_WIND_TYPE) self.wind_type = dict() for _type in data['data']: self.wind_type[int(_type['classWindSpeed'])] = _type['descClassWindSpeedDailyPT'] return se...

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def get_document_field_display(self, field_name, field): """ Render a link to a document """ document = getattr(self.instance, field_name) if document: return mark_safe( '<a href="%s">%s <span class="meta">(%s, %s)</span></a>' % ( document.url, ...

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def forwards(self, orm): "Write your forwards methods here." for tag in orm['tagging.Tag'].objects.all(): if tag.tagtitle_set.all().count() == 0: orm['tagging_translated.TagTitle'].objects.create( trans_name=tag.name, tag=tag, language='en')

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def set_bg_data(self, bg_data, which_data=None): """Set background amplitude and phase data Parameters ---------- bg_data: 2d ndarray (float or complex), list, QPImage, or `None` The background data (must be same type as `data`). If set to `None`, the background ...

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def _create_das_mapping(self): """ das_map = {'lookup' : [{params : {'param1' : 'required', 'param2' : 'optional', 'param3' : 'default_value' ...}, url : 'https://cmsweb.cern.ch:8443/dbs/prod/global/DBSReader/acquisitioneras/', das_map : {'...

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def get_rightmost_index(byte_index=0, file_starts=[0]): ''' Retrieve the highest-indexed file that starts at or before byte_index. ''' i = 1 while i <= len(file_starts): start = file_starts[-i] if start <= byte_index: return len(file_starts) - i else: ...

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def drawQuad(self, quad): """Draw a Quad. """ q = Quad(quad) return self.drawPolyline([q.ul, q.ll, q.lr, q.ur, q.ul])

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def symbol_targets_bottom(x, model_hparams, vocab_size): """Bottom transformation for target symbols.""" if (model_hparams.shared_embedding_and_softmax_weights or model_hparams.get("shared_embedding")): try: return _symbol_bottom_simple( x, model_hparams, vocab_size, "shared", reuse=True) ...

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def convert_to_article(request, entry_id): """ This method converts a tip entry to an unpublished article :param entry_id: Tip entry to convert :return: redirect to the edit page of the converted tip """ def get_entry_author(entry): if not entry.optional_name: return 'By Anon...

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def cmd(send, msg, args): """Gets words of wisdom Syntax: {command} (--author <author>|--search <topic>) Powered by STANDS4, www.stands4.com """ uid = args['config']['api']['stands4uid'] token = args['config']['api']['stands4token'] parser = arguments.ArgParser(args['config']) group = pa...

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def replace_pipe(self, name, component): """Replace a component in the pipeline. name (unicode): Name of the component to replace. component (callable): Pipeline component. DOCS: https://spacy.io/api/language#replace_pipe """ if name not in self.pipe_names: ...

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def parse_attribute(tokens, is_merc): """ Parse a token stream from inside an attribute selector. Enter this function after a left-bracket is found: http://www.w3.org/TR/CSS2/selector.html#attribute-selectors """ # # Local helper functions # def next_scalar(tokens, op): ...

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def parse_group_address(addr): """Parse KNX group addresses and return the address as an integer. This allows to convert x/x/x and x/x address syntax to a numeric KNX group address """ if addr is None: raise KNXException("No address given") res = None if re.match('[0-9]+$', addr)...

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def __calculate_score(self, index_point, index_cluster): """! @brief Calculates Silhouette score for the specific object defined by index_point. @param[in] index_point (uint): Index point from input data for which Silhouette score should be calculated. @param[in] index_cluster (uin...

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def plot_distributions(self, parameters=None, truth=None, extents=None, display=False, filename=None, chains=None, col_wrap=4, figsize=None, blind=None): # pragma: no cover """ Plots the 1D parameter distributions for verification purposes. This plot is more for a sanity or ...

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def get_gaf_gene_ontology_file(path): """Extract the gene ontology file associated with a GO annotation file. Parameters ---------- path: str The path name of the GO annotation file. Returns ------- str The URL of the associated gene ontology file. """ assert isinst...

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def is_modified_field(self, name): """ Returns whether a field is modified or not """ name = self.get_real_name(name) if name in self.__modified_data__ or name in self.__deleted_fields__: return True try: return self.get_field_value(name).is_modi...

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def intersect_leaderboards(self, destination, keys, aggregate='SUM'): ''' Intersect leaderboards given by keys with this leaderboard into a named destination leaderboard. @param destination [String] Destination leaderboard name. @param keys [Array] Leaderboards to be merged with the cur...

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def custom_to_radec(phi1,phi2,T=None,degree=False): """ NAME: custom_to_radec PURPOSE: rotate a custom set of sky coordinates (phi1, phi2) to (ra, dec) given the rotation matrix T for (ra, dec) -> (phi1, phi2) INPUT: phi1 - custom sky coord phi2 - custom sky c...

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def menuitemenabled(self, window_name, object_name): """ Verify a menu item is enabled @param window_name: Window name to look for, either full name, LDTP's name convention, or a Unix glob. @type window_name: string @param object_name: Object name to look for, either ful...

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def _get_warped_mean(self, mean, std, pred_init=None, deg_gauss_hermite=20): """ Calculate the warped mean by using Gauss-Hermite quadrature. """ gh_samples, gh_weights = np.polynomial.hermite.hermgauss(deg_gauss_hermite) gh_samples = gh_samples[:, None] gh_weights = gh_w...

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def lowPassFilter(self, threshold): ''' remove all high frequencies by setting boundary around a quarry in the middle of the size (2*threshold)^2 to zero threshold = 0...1 ''' if not threshold: return rows, cols = self.img.shape tx = i...

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def process_input_line(self, line, store_history=True): """process the input, capturing stdout""" #print "input='%s'"%self.input stdout = sys.stdout splitter = self.IP.input_splitter try: sys.stdout = self.cout splitter.push(line) more = splitt...

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def get_prefix_dir(archive): """ Often, all files are in a single directory. If so, they'll all have the same prefix. Determine any such prefix. archive is a ZipFile """ names = archive.namelist() shortest_name = sorted(names, key=len)[0] candidate_prefixes = [ shortest_name[:len...

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def get_event_public_discount(self, id, discount_id, **data): """ GET /events/:id/public_discounts/:discount_id/ Gets a public :format:`discount` by ID as the key ``discount``. """ return self.get("/events/{0}/public_discounts/{0}/".format(id,discount_id), data=data)

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