repo stringlengths 7 54 | path stringlengths 4 192 | url stringlengths 87 284 | code stringlengths 78 104k | code_tokens list | docstring stringlengths 1 46.9k | docstring_tokens list | language stringclasses 1
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sorgerlab/indra | indra/databases/hgnc_client.py | https://github.com/sorgerlab/indra/blob/79a70415832c5702d7a820c7c9ccc8e25010124b/indra/databases/hgnc_client.py#L83-L107 | def get_hgnc_name(hgnc_id):
"""Return the HGNC symbol corresponding to the given HGNC ID.
Parameters
----------
hgnc_id : str
The HGNC ID to be converted.
Returns
-------
hgnc_name : str
The HGNC symbol corresponding to the given HGNC ID.
"""
try:
hgnc_name ... | [
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ganguli-lab/proxalgs | proxalgs/tensor.py | https://github.com/ganguli-lab/proxalgs/blob/74f54467ad072d3229edea93fa84ddd98dd77c67/proxalgs/tensor.py#L69-L96 | def susvd(x, x_obs, rho, penalties):
"""
Sequential unfolding SVD
Parameters
----------
x : Tensor
x_obs : array_like
rho : float
penalties : array_like
penalty for each unfolding of the input tensor
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assert type(x) == Tensor, "Input array must be a Tensor"
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mathandy/svgpathtools | svgpathtools/document.py | https://github.com/mathandy/svgpathtools/blob/fd7348a1dfd88b65ea61da02325c6605aedf8c4f/svgpathtools/document.py#L324-L338 | def add_group(self, group_attribs=None, parent=None):
"""Add an empty group element to the SVG."""
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edx/edx-django-utils | edx_django_utils/monitoring/middleware.py | https://github.com/edx/edx-django-utils/blob/16cb4ac617e53c572bf68ccd19d24afeff1ca769/edx_django_utils/monitoring/middleware.py#L115-L122 | def process_request(self, request):
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Store memory data to log later.
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if self._is_enabled():
self._cache.set(self.guid_key, six.text_type(uuid4()))
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psd-tools/psd-tools | src/psd_tools/compression.py | https://github.com/psd-tools/psd-tools/blob/4952b57bcf1cf2c1f16fd9d6d51d4fa0b53bce4e/src/psd_tools/compression.py#L154-L173 | def _shuffled_order(w, h):
"""
Generator for the order of 4-byte values.
32bit channels are also encoded using delta encoding,
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It is possible to apply delta compression to 2-byte or 4-byte
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ev3dev/ev3dev-lang-python | ev3dev2/sensor/lego.py | https://github.com/ev3dev/ev3dev-lang-python/blob/afc98d35004b533dc161a01f7c966e78607d7c1e/ev3dev2/sensor/lego.py#L791-L797 | def heading(self, channel=1):
"""
Returns heading (-25, 25) to the beacon on the given channel.
"""
self._ensure_mode(self.MODE_IR_SEEK)
channel = self._normalize_channel(channel)
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google/openhtf | openhtf/output/servers/station_server.py | https://github.com/google/openhtf/blob/655e85df7134db7bdf8f8fdd6ff9a6bf932e7b09/openhtf/output/servers/station_server.py#L202-L210 | def _to_dict_with_event(cls, test_state):
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SheffieldML/GPy | GPy/util/cluster_with_offset.py | https://github.com/SheffieldML/GPy/blob/54c32d79d289d622fb18b898aee65a2a431d90cf/GPy/util/cluster_with_offset.py#L91-L179 | def cluster(data,inputs,verbose=False):
"""Clusters data
Using the new offset model, this method uses a greedy algorithm to cluster
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basecrm/basecrm-python | basecrm/services.py | https://github.com/basecrm/basecrm-python/blob/7c1cf97dbaba8aeb9ff89f8a54f945a8702349f6/basecrm/services.py#L1323-L1337 | def retrieve(self, id) :
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Retrieve a single order
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:return: Dictionary ... | [
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iamteem/redisco | redisco/containers.py | https://github.com/iamteem/redisco/blob/a7ba19ff3c38061d6d8bc0c10fa754baadcfeb91/redisco/containers.py#L138-L143 | def difference(self, key, *others):
"""Return a new set with elements in the set that are not in the others."""
if not isinstance(key, str):
raise ValueError("String expected.")
self.db.sdiffstore(key, [self.key] + [o.key for o in others])
return Set(key) | [
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databio/pypiper | pypiper/ngstk.py | https://github.com/databio/pypiper/blob/00e6c2b94033c4187d47ff14c5580bbfc2ff097f/pypiper/ngstk.py#L922-L945 | def fastqc_rename(self, input_bam, output_dir, sample_name):
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Create pair of commands to run fastqc and organize files.
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treethought/flask-assistant | api_ai/api.py | https://github.com/treethought/flask-assistant/blob/9331b9796644dfa987bcd97a13e78e9ab62923d3/api_ai/api.py#L77-L84 | def agent_intents(self):
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endpoint = self._intent_uri()
intents = self._get(endpoint) # should be list of dicts
if isinstance(intents, dict): # if error: intents = {status: {error}}
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SecurityInnovation/PGPy | pgpy/pgp.py | https://github.com/SecurityInnovation/PGPy/blob/f1c3d68e32c334f5aa14c34580925e97f17f4fde/pgpy/pgp.py#L1795-L1835 | def sign(self, subject, **prefs):
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Sign text, a message, or a timestamp using this key.
:param subject: The text to be signed
:type subject: ``str``, :py:obj:`~pgpy.PGPMessage`, ``None``
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joke2k/faker | faker/providers/date_time/__init__.py | https://github.com/joke2k/faker/blob/965824b61132e52d92d1a6ce470396dbbe01c96c/faker/providers/date_time/__init__.py#L1550-L1572 | def date_time_between(self, start_date='-30y', end_date='now', tzinfo=None):
"""
Get a DateTime object based on a random date between two given dates.
Accepts date strings that can be recognized by strtotime().
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evyatarmeged/Raccoon | raccoon_src/lib/host.py | https://github.com/evyatarmeged/Raccoon/blob/985797f73329976ec9c3fefbe4bbb3c74096ca51/raccoon_src/lib/host.py#L88-L137 | def parse(self):
"""
Try to extract domain (full, naked, sub-domain), IP and port.
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if self.target.endswith("/"):
self.target = self.target[:-1]
if self._is_proto(self.target):
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standage/tag | tag/feature.py | https://github.com/standage/tag/blob/94686adf57115cea1c5235e99299e691f80ba10b/tag/feature.py#L525-L550 | def attribute_crawl(self, key):
"""
Grab all attribute values associated with the given feature.
Traverse the given feature (and all of its descendants) to find all
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>>> reader = tag.GFF3Reader(tag.pkgdata('o... | [
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apple/turicreate | deps/src/boost_1_68_0/tools/build/src/build/feature.py | https://github.com/apple/turicreate/blob/74514c3f99e25b46f22c6e02977fe3da69221c2e/deps/src/boost_1_68_0/tools/build/src/build/feature.py#L637-L644 | def __is_subproperty_of (parent_property, p):
""" As is_subfeature_of, for subproperties.
"""
if __debug__:
from .property import Property
assert isinstance(parent_property, Property)
assert isinstance(p, Property)
return is_subfeature_of (parent_property, p.feature) | [
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tanghaibao/goatools | goatools/anno/init/reader_genetogo.py | https://github.com/tanghaibao/goatools/blob/407682e573a108864a79031f8ca19ee3bf377626/goatools/anno/init/reader_genetogo.py#L114-L118 | def _prt_line_detail(self, prt, line, lnum=""):
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UCL-INGI/INGInious | inginious/frontend/pages/course_admin/classroom_edit.py | https://github.com/UCL-INGI/INGInious/blob/cbda9a9c7f2b8e8eb1e6d7d51f0d18092086300c/inginious/frontend/pages/course_admin/classroom_edit.py#L21-L64 | def get_user_lists(self, course, classroomid):
""" Get the available student and tutor lists for classroom edition"""
tutor_list = course.get_staff()
# Determine if user is grouped or not in the classroom
student_list = list(self.database.classrooms.aggregate([
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CellProfiler/centrosome | centrosome/otsu.py | https://github.com/CellProfiler/centrosome/blob/7bd9350a2d4ae1b215b81eabcecfe560bbb1f32a/centrosome/otsu.py#L205-L217 | def entropy_score(var,bins, w=None, decimate=True):
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'''
if w is None:
n = len(var)
w = np.arange(0,n,n//bins) / float(n)
if decimate:
n = len(var)
var = var[0:n:n//bins]
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rootpy/rootpy | rootpy/collection.py | https://github.com/rootpy/rootpy/blob/3926935e1f2100d8ba68070c2ab44055d4800f73/rootpy/collection.py#L34-L48 | def as_list_with_options(self):
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Similar to list(self) except elements which have an option associated
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it = ROOT.TIter(self)
elem = it.Next()
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juju/charm-helpers | charmhelpers/fetch/python/debug.py | https://github.com/juju/charm-helpers/blob/aa785c40c3b7a8c69dbfbc7921d6b9f30142e171/charmhelpers/fetch/python/debug.py#L41-L54 | def set_trace(addr=DEFAULT_ADDR, port=DEFAULT_PORT):
"""
Set a trace point using the remote debugger
"""
atexit.register(close_port, port)
try:
log("Starting a remote python debugger session on %s:%s" % (addr,
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modin-project/modin | modin/pandas/io.py | https://github.com/modin-project/modin/blob/5b77d242596560c646b8405340c9ce64acb183cb/modin/pandas/io.py#L35-L101 | def _make_parser_func(sep):
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ryanmcgrath/twython-django | twython_django_oauth/views.py | https://github.com/ryanmcgrath/twython-django/blob/e49e3ccba94939187378993269eff19e198e5f64/twython_django_oauth/views.py#L27-L44 | def begin_auth(request):
"""The view function that initiates the entire handshake.
For the most part, this is 100% drag and drop.
"""
# Instantiate Twython with the first leg of our trip.
twitter = Twython(settings.TWITTER_KEY, settings.TWITTER_SECRET)
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maxzheng/bumper-lib | bumper/cars.py | https://github.com/maxzheng/bumper-lib/blob/32a9dec5448673825bb2d7d92fa68882b597f794/bumper/cars.py#L33-L41 | def parse(cls, s, required=False):
"""
Parse string to create an instance
:param str s: String with requirement to parse
:param bool required: Is this requirement required to be fulfilled? If not, then it is a filter.
"""
req = pkg_resources.Requirement.parse(s)
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dwavesystems/dwave_embedding_utilities | dwave_embedding_utilities.py | https://github.com/dwavesystems/dwave_embedding_utilities/blob/2e485e0ae89d96f3c0005f144bab4b465a3039a3/dwave_embedding_utilities.py#L549-L553 | def _all_equal(iterable):
"""True if all values in `iterable` are equal, else False."""
iterator = iter(iterable)
first = next(iterator)
return all(first == rest for rest in iterator) | [
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glue-viz/glue-vispy-viewers | glue_vispy_viewers/extern/vispy/gloo/texture.py | https://github.com/glue-viz/glue-vispy-viewers/blob/54a4351d98c1f90dfb1a557d1b447c1f57470eea/glue_vispy_viewers/extern/vispy/gloo/texture.py#L226-L277 | def _resize(self, shape, format=None, internalformat=None):
"""Internal method for resize.
"""
shape = self._normalize_shape(shape)
# Check
if not self._resizable:
raise RuntimeError("Texture is not resizable")
# Determine format
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rm-hull/luma.emulator | luma/emulator/device.py | https://github.com/rm-hull/luma.emulator/blob/ca3db028b33d17cda9247ea5189873ff0408d013/luma/emulator/device.py#L262-L273 | def _generate_art(self, image, width, height):
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Return an iterator that produces the ascii art.
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# Characters aren't square, so scale the output by the aspect ratio of a charater
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OpenKMIP/PyKMIP | kmip/services/server/crypto/engine.py | https://github.com/OpenKMIP/PyKMIP/blob/b51c5b044bd05f8c85a1d65d13a583a4d8fc1b0e/kmip/services/server/crypto/engine.py#L290-L377 | def encrypt(self,
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mvn23/pyotgw | pyotgw/pyotgw.py | https://github.com/mvn23/pyotgw/blob/7612378ef4332b250176505af33e7536d6c9da78/pyotgw/pyotgw.py#L218-L278 | async def get_reports(self):
"""
Update the pyotgw object with the information from all of the
PR commands and return the updated status dict.
This method is a coroutine
"""
cmd = OTGW_CMD_REPORT
reports = {}
for value in OTGW_REPORTS.keys():
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stevepeak/dictime | dictime/dictime.py | https://github.com/stevepeak/dictime/blob/6d8724bed5a7844e47a9c16a233f8db494c98c61/dictime/dictime.py#L123-L135 | def has_key(self, key):
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This method will check to see if it has expired too.
"""
if key in self._dict:
try:
self[key]
return True
except ValueError:
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pymupdf/PyMuPDF | fitz/fitz.py | https://github.com/pymupdf/PyMuPDF/blob/917f2d83482510e26ba0ff01fd2392c26f3a8e90/fitz/fitz.py#L2121-L2141 | def save(self, filename, garbage=0, clean=0, deflate=0, incremental=0, ascii=0, expand=0, linear=0, pretty=0, decrypt=1):
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BlockHub/blockhubdpostools | dpostools/api.py | https://github.com/BlockHub/blockhubdpostools/blob/27712cd97cd3658ee54a4330ff3135b51a01d7d1/dpostools/api.py#L36-L48 | def add_peer(self, peer):
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piface/pifacecommon | pifacecommon/interrupts.py | https://github.com/piface/pifacecommon/blob/006bca14c18d43ba2d9eafaa84ef83b512c51cf6/pifacecommon/interrupts.py#L381-L392 | def bring_gpio_interrupt_into_userspace(): # activate gpio interrupt
"""Bring the interrupt pin on the GPIO into Linux userspace."""
try:
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horazont/aioxmpp | aioxmpp/utils.py | https://github.com/horazont/aioxmpp/blob/22a68e5e1d23f2a4dee470092adbd4672f9ef061/aioxmpp/utils.py#L269-L318 | def gather_reraise_multi(*fut_or_coros, message="gather_reraise_multi"):
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Wrap all the arguments `fut_or_coros` in futures with
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fracpete/python-weka-wrapper3 | python/weka/core/classes.py | https://github.com/fracpete/python-weka-wrapper3/blob/d850ab1bdb25fbd5a8d86e99f34a397975425838/python/weka/core/classes.py#L90-L105 | def get_classname(obj):
"""
Returns the classname of the JB_Object, Python class or object.
:param obj: the java object or Python class/object to get the classname for
:type obj: object
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cosven/feeluown-core | fuocore/netease/api.py | https://github.com/cosven/feeluown-core/blob/62dc64638f62971b16be0a75c0b8c7ae2999869e/fuocore/netease/api.py#L116-L129 | def search(self, s, stype=1, offset=0, total='true', limit=60):
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action = uri + '/search/get'
data = {
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'type': stype,
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mwouts/jupytext | jupytext/cell_metadata.py | https://github.com/mwouts/jupytext/blob/eb7d6aee889f80ad779cfc53441c648f0db9246d/jupytext/cell_metadata.py#L314-L330 | def try_eval_metadata(metadata, name):
"""Evaluate given metadata to a python object, if possible"""
value = metadata[name]
if not isinstance(value, (str, unicode)):
return
if (value.startswith('"') and value.endswith('"')) or (value.startswith("'") and value.endswith("'")):
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rm-hull/luma.core | luma/core/mixin.py | https://github.com/rm-hull/luma.core/blob/034b628fb304a01e77732a299c0b42e94d6443db/luma/core/mixin.py#L13-L40 | def capabilities(self, width, height, rotate, mode="1"):
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MediaFire/mediafire-python-open-sdk | mediafire/api.py | https://github.com/MediaFire/mediafire-python-open-sdk/blob/8f1f23db1b16f16e026f5c6777aec32d00baa05f/mediafire/api.py#L430-L439 | def user_set_avatar(self, action=None, quick_key=None, url=None):
"""user/set_avatar
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return self.request("user/set_avatar", QueryParams({
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PmagPy/PmagPy | pmagpy/pmag.py | https://github.com/PmagPy/PmagPy/blob/c7984f8809bf40fe112e53dcc311a33293b62d0b/pmagpy/pmag.py#L4554-L4578 | def b_vdm(B, lat):
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Converts a magnetic field value (input in units of tesla) to a virtual
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saltstack/salt | salt/roster/terraform.py | https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/roster/terraform.py#L128-L159 | def _parse_state_file(state_file_path='terraform.tfstate'):
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Parses the terraform state file passing different resource types to the right handler
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aws/aws-encryption-sdk-python | src/aws_encryption_sdk/streaming_client.py | https://github.com/aws/aws-encryption-sdk-python/blob/d182155d5fb1ef176d9e7d0647679737d5146495/src/aws_encryption_sdk/streaming_client.py#L859-L899 | def _read_bytes_from_framed_body(self, b):
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saimn/sigal | sigal/video.py | https://github.com/saimn/sigal/blob/912ca39991355d358dc85fd55c7aeabdd7acc386/sigal/video.py#L149-L192 | def process_video(filepath, outpath, settings):
"""Process a video: resize, create thumbnail."""
logger = logging.getLogger(__name__)
filename = os.path.split(filepath)[1]
basename, ext = splitext(filename)
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RudolfCardinal/pythonlib | cardinal_pythonlib/interval.py | https://github.com/RudolfCardinal/pythonlib/blob/0b84cb35f38bd7d8723958dae51b480a829b7227/cardinal_pythonlib/interval.py#L412-L431 | def dayspan(startdate: datetime.date,
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jobovy/galpy | galpy/util/bovy_plot.py | https://github.com/jobovy/galpy/blob/9c5b9fe65d58835624dffe432be282060918ee08/galpy/util/bovy_plot.py#L374-L458 | def bovy_plot3d(*args,**kwargs):
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plot in 3d much as in 2d
INPUT:
see http://matplotlib.sourceforge.net/api/pyplot_api.html#matplotlib.pyplot.plot
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stephanepechard/projy | projy/cmdline.py | https://github.com/stephanepechard/projy/blob/3146b0e3c207b977e1b51fcb33138746dae83c23/projy/cmdline.py#L94-L110 | def template_class_from_name(name):
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# import the right template module
term = TerminalView()
template_name = name + 'Template'
try:
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galaxyproject/pulsar | pulsar/client/action_mapper.py | https://github.com/galaxyproject/pulsar/blob/9ab6683802884324652da0a9f0808c7eb59d3ab4/pulsar/client/action_mapper.py#L235-L242 | def __process_action(self, action, file_type):
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aegirhall/console-menu | consolemenu/menu_formatter.py | https://github.com/aegirhall/console-menu/blob/1a28959d6f1dd6ac79c87b11efd8529d05532422/consolemenu/menu_formatter.py#L256-L288 | def format(self, title=None, subtitle=None, prologue_text=None, epilogue_text=None, items=None):
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Format the menu and return as a string.
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saltstack/salt | salt/utils/cloud.py | https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/utils/cloud.py#L3097-L3158 | def diff_node_cache(prov_dir, node, new_data, opts):
'''
Check new node data against current cache. If data differ, fire an event
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This function will only run if configured to do so in the main Salt Cloud
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ronaldguillen/wave | wave/utils/breadcrumbs.py | https://github.com/ronaldguillen/wave/blob/20bb979c917f7634d8257992e6d449dc751256a9/wave/utils/breadcrumbs.py#L6-L58 | def get_breadcrumbs(url, request=None):
"""
Given a url returns a list of breadcrumbs, which are each a
tuple of (name, url).
"""
from wave.reverse import preserve_builtin_query_params
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michal-stuglik/django-blastplus | blastplus/utils.py | https://github.com/michal-stuglik/django-blastplus/blob/4f5e15fb9f8069c3bed5f8fd941c4b9891daad4b/blastplus/utils.py#L71-L96 | def run_blast_commands(ncbicommandline_method, **keywords):
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# temporary files for output
blast_out_tmp = tempfile.NamedTemporaryFile(mode="w+",delete=False)
keywords['out'] = blast_out_tmp.name
# unpack query ... | [
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acorg/dark-matter | dark/sam.py | https://github.com/acorg/dark-matter/blob/c78a1bf262667fa5db3548fa7066c4ec14d0551d/dark/sam.py#L272-L299 | def parseFilteringOptions(cls, args, filterRead=None, storeQueryIds=False):
"""
Parse command line options (added in C{addSAMFilteringOptions}.
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tensorflow/tensor2tensor | tensor2tensor/models/research/glow_ops.py | https://github.com/tensorflow/tensor2tensor/blob/272500b6efe353aeb638d2745ed56e519462ca31/tensor2tensor/models/research/glow_ops.py#L226-L261 | def actnorm(name, x, logscale_factor=3., reverse=False, init=False,
trainable=True):
"""x_{ij} = s x x_{ij} + b. Per-channel scaling and bias.
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sebp/scikit-survival | sksurv/svm/survival_svm.py | https://github.com/sebp/scikit-survival/blob/cfc99fd20454cdd6f4f20fe331b39f2191ccaabc/sksurv/svm/survival_svm.py#L825-L851 | def predict(self, X):
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Lower ranks indicate shorter survival, higher ranks longer survival.
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X : array-like, shape = (n_samples, n_features)
The input samples.
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Metatab/metapack | metapack/jupyter/exporters.py | https://github.com/Metatab/metapack/blob/8365f221fbeaa3c0be9091f2eaf3447fd8e2e8d6/metapack/jupyter/exporters.py#L292-L347 | def from_notebook_node(self, nb, resources=None, **kw):
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pymupdf/PyMuPDF | fitz/fitz.py | https://github.com/pymupdf/PyMuPDF/blob/917f2d83482510e26ba0ff01fd2392c26f3a8e90/fitz/fitz.py#L2563-L2574 | def addLineAnnot(self, p1, p2):
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ejeschke/ginga | ginga/util/io_rgb.py | https://github.com/ejeschke/ginga/blob/a78c893ec6f37a837de851947e9bb4625c597915/ginga/util/io_rgb.py#L125-L211 | def _imload(self, filepath, kwds):
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django-treebeard/django-treebeard | treebeard/models.py | https://github.com/django-treebeard/django-treebeard/blob/8042ee939cb45394909237da447f8925e3cc6aa3/treebeard/models.py#L43-L57 | def get_foreign_keys(cls):
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pygobject/pgi | pgi/importer.py | https://github.com/pygobject/pgi/blob/2090435df6241a15ec2a78379a36b738b728652c/pgi/importer.py#L117-L136 | def get_import_stacklevel(import_hook):
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molmod/molmod | molmod/binning.py | https://github.com/molmod/molmod/blob/a7b5b4364ed514ad4c465856c05b5eda1cb561e0/molmod/binning.py#L94-L102 | def iter_surrounding(self, center_key):
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saltstack/salt | salt/modules/boto_datapipeline.py | https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/boto_datapipeline.py#L222-L231 | def _get_client(region, key, keyid, profile):
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Get a boto connection to Data Pipeline.
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ARMmbed/mbed-cloud-sdk-python | src/mbed_cloud/_backends/mds/apis/endpoints_api.py | https://github.com/ARMmbed/mbed-cloud-sdk-python/blob/c0af86fb2cdd4dc7ed26f236139241067d293509/src/mbed_cloud/_backends/mds/apis/endpoints_api.py#L127-L147 | def get_endpoint_resources(self, device_id, **kwargs): # noqa: E501
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nerdvegas/rez | src/rez/vendor/version/version.py | https://github.com/nerdvegas/rez/blob/1d3b846d53b5b5404edfe8ddb9083f9ceec8c5e7/src/rez/vendor/version/version.py#L297-L302 | def copy(self):
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tomplus/kubernetes_asyncio | kubernetes_asyncio/client/api/extensions_v1beta1_api.py | https://github.com/tomplus/kubernetes_asyncio/blob/f9ab15317ec921409714c7afef11aeb0f579985d/kubernetes_asyncio/client/api/extensions_v1beta1_api.py#L7051-L7075 | def replace_namespaced_daemon_set_status(self, name, namespace, body, **kwargs): # noqa: E501
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replace status of the specified DaemonSet # noqa: E501
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slackapi/python-slackclient | slack/web/client.py | https://github.com/slackapi/python-slackclient/blob/901341c0284fd81e6d2719d6a0502308760d83e4/slack/web/client.py#L547-L556 | def files_comments_add(self, *, comment: str, file: str, **kwargs) -> SlackResponse:
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playpauseandstop/rororo | rororo/settings.py | https://github.com/playpauseandstop/rororo/blob/28a04e8028c29647941e727116335e9d6fd64c27/rororo/settings.py#L37-L67 | def immutable_settings(defaults: Settings,
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awslabs/aws-sam-cli | samcli/local/apigw/local_apigw_service.py | https://github.com/awslabs/aws-sam-cli/blob/c05af5e7378c6f05f7d82ad3f0bca17204177db6/samcli/local/apigw/local_apigw_service.py#L92-L102 | def _generate_route_keys(self, methods, path):
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drericstrong/pyedna | pyedna/ezdna.py | https://github.com/drericstrong/pyedna/blob/b8f8f52def4f26bb4f3a993ce3400769518385f6/pyedna/ezdna.py#L458-L508 | def GetPoints(edna_service):
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spencerahill/aospy | aospy/calc.py | https://github.com/spencerahill/aospy/blob/2f6e775b9b9956c54af117fdcdce2c87196afb6c/aospy/calc.py#L331-L335 | def _get_all_data(self, start_date, end_date):
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pypa/setuptools | setuptools/package_index.py | https://github.com/pypa/setuptools/blob/83c667e0b2a98193851c07115d1af65011ed0fb6/setuptools/package_index.py#L667-L678 | def fetch(self, requirement, tmpdir, force_scan=False, source=False):
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clchiou/startup | startup.py | https://github.com/clchiou/startup/blob/13cbf3ce1deffbc10d33a5f64c396a73129a5929/startup.py#L350-L356 | def write(self, value):
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OpenHumans/open-humans-api | ohapi/command_line.py | https://github.com/OpenHumans/open-humans-api/blob/ca2a28cf5d55cfdae13dd222ba58c25565bdb86e/ohapi/command_line.py#L444-L453 | def oauth2_auth_url_cli(redirect_uri=None, client_id=None,
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"""
Command line function for obtaining the Oauth2 url.
For more information visit
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ergoithz/browsepy | browsepy/manager.py | https://github.com/ergoithz/browsepy/blob/1612a930ef220fae507e1b152c531707e555bd92/browsepy/manager.py#L385-L393 | def clear(self):
'''
Clear plugin manager state.
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kmmbvnr/django-any | django_any/forms.py | https://github.com/kmmbvnr/django-any/blob/6f64ebd05476e2149e2e71deeefbb10f8edfc412/django_any/forms.py#L375-L383 | def model_choice_field_data(field, **kwargs):
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nerdvegas/rez | src/rezgui/objects/Config.py | https://github.com/nerdvegas/rez/blob/1d3b846d53b5b5404edfe8ddb9083f9ceec8c5e7/src/rezgui/objects/Config.py#L15-L33 | def value(self, key, type_=None):
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cisco-sas/kitty | kitty/model/low_level/container.py | https://github.com/cisco-sas/kitty/blob/cb0760989dcdfe079e43ac574d872d0b18953a32/kitty/model/low_level/container.py#L135-L147 | def set_offset(self, offset):
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Clinical-Genomics/scout | scout/adapter/mongo/variant_loader.py | https://github.com/Clinical-Genomics/scout/blob/90a551e2e1653a319e654c2405c2866f93d0ebb9/scout/adapter/mongo/variant_loader.py#L290-L304 | def load_variant(self, variant_obj):
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iotile/typedargs | typedargs/typeinfo.py | https://github.com/iotile/typedargs/blob/0a5091a664b9b4d836e091e9ba583e944f438fd8/typedargs/typeinfo.py#L350-L366 | def load_external_types(self, path):
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JoelBender/bacpypes | py25/bacpypes/iocb.py | https://github.com/JoelBender/bacpypes/blob/4111b8604a16fa2b7f80d8104a43b9f3e28dfc78/py25/bacpypes/iocb.py#L415-L430 | def abort(self, err):
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brutasse/graphite-api | graphite_api/functions.py | https://github.com/brutasse/graphite-api/blob/0886b7adcf985a1e8bcb084f6dd1dc166a3f3dff/graphite_api/functions.py#L1464-L1492 | def consolidateBy(requestContext, seriesList, consolidationFunc):
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MultipedRobotics/pyxl320 | pyxl320/Packet.py | https://github.com/MultipedRobotics/pyxl320/blob/1a56540e208b028ee47d5fa0a7c7babcee0d9214/pyxl320/Packet.py#L474-L490 | def packetToDict(pkt):
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Given a packet, this turns it into a dictionary ... is this useful?
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out: dictionary (key, value)
"""
d = {
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cloudendpoints/endpoints-python | endpoints/apiserving.py | https://github.com/cloudendpoints/endpoints-python/blob/00dd7c7a52a9ee39d5923191c2604b8eafdb3f24/endpoints/apiserving.py#L469-L494 | def protorpc_to_endpoints_error(self, status, body):
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DAI-Lab/Copulas | copulas/multivariate/tree.py | https://github.com/DAI-Lab/Copulas/blob/821df61c3d36a6b81ef2883935f935c2eaaa862c/copulas/multivariate/tree.py#L140-L163 | def get_tau_matrix(self):
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inspirehep/plotextractor | plotextractor/extractor.py | https://github.com/inspirehep/plotextractor/blob/12a65350fb9f32d496f9ea57908d9a2771b20474/plotextractor/extractor.py#L570-L771 | def put_it_together(cur_image, caption, context, extracted_image_data,
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pantsbuild/pants | src/python/pants/backend/python/subsystems/python_native_code.py | https://github.com/pantsbuild/pants/blob/b72e650da0df685824ffdcc71988b8c282d0962d/src/python/pants/backend/python/subsystems/python_native_code.py#L77-L91 | def _get_targets_by_declared_platform_with_placeholders(self, targets_by_platform):
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ioos/compliance-checker | compliance_checker/ioos.py | https://github.com/ioos/compliance-checker/blob/ee89c27b0daade58812489a2da3aa3b6859eafd9/compliance_checker/ioos.py#L163-L177 | def check_altitude_units(self, ds):
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ladybug-tools/ladybug | ladybug/designday.py | https://github.com/ladybug-tools/ladybug/blob/c08b7308077a48d5612f644943f92d5b5dade583/ladybug/designday.py#L1230-L1239 | def _get_datetimes(self, timestep=1):
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agabrown/PyGaia | pygaia/errors/astrometric.py | https://github.com/agabrown/PyGaia/blob/ae972b0622a15f713ffae471f925eac25ccdae47/pygaia/errors/astrometric.py#L230-L256 | def positionMinError(G, vmini, extension=0.0):
"""
Calculate the minimum position errors from G and (V-I). These correspond to the sky regions with the
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NOTE! THE ERRORS ARE FOR SKY POSITIONS IN THE ICRS (I.E., RIGHT ASCENSION, DECLINATION). MAKE SURE YOUR
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jmcarp/betfair.py | betfair/betfair.py | https://github.com/jmcarp/betfair.py/blob/116df2fdc512575d1b4c4f1749d4a5bf98e519ff/betfair/betfair.py#L460-L477 | def get_account_statement(
self, locale=None, from_record=None, record_count=None,
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:param int from_record: Specifies the first record that will be returned
:param int record_count: Specifies the maximum number of records to be returned
:param TimeRange item_date_range: Return items with... | [
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lemieuxl/pyplink | pyplink/pyplink.py | https://github.com/lemieuxl/pyplink/blob/31d47c86f589064bda98206314a2d0b20e7fd2f0/pyplink/pyplink.py#L204-L220 | def seek(self, n):
"""Gets to a certain marker position in the BED file.
Args:
n (int): The index of the marker to seek to.
"""
if self._mode != "r":
raise UnsupportedOperation("not available in 'w' mode")
if 0 <= n < self._nb_markers:
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mzucker/noteshrink | noteshrink.py | https://github.com/mzucker/noteshrink/blob/7d876e5b43923c6bf8d64b7ef18f6855bfb30ce3/noteshrink.py#L141-L182 | def postprocess(output_filename, options):
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pymc-devs/pymc | pymc/Model.py | https://github.com/pymc-devs/pymc/blob/c6e530210bff4c0d7189b35b2c971bc53f93f7cd/pymc/Model.py#L248-L256 | def _finalize(self):
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if self.status in ['running', 'halt']:
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print_('\nSampling finished normally.')
self.status = 'ready'
self.save_state()
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jaraco/irc | irc/client.py | https://github.com/jaraco/irc/blob/571c1f448d5d5bb92bbe2605c33148bf6e698413/irc/client.py#L1186-L1192 | def dcc_listen(self, dcctype="chat"):
"""Listen for connections from a DCC peer.
Returns a DCCConnection instance.
"""
warnings.warn("Use self.dcc(type).listen()", DeprecationWarning)
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BDNYC/astrodbkit | astrodbkit/astrocat.py | https://github.com/BDNYC/astrodbkit/blob/02c03c5e91aa7c7b0f3b5fa95bcf71e33ffcee09/astrodbkit/astrocat.py#L468-L483 | def drop_catalog(self, cat_name):
"""
Remove an imported catalog from the Dataset object
Parameters
----------
cat_name: str
The name given to the catalog
"""
# Delete the name and data
self.catalogs.pop(cat_name)
delattr(self,... | [
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Feneric/doxypypy | doxypypy/doxypypy.py | https://github.com/Feneric/doxypypy/blob/a8555b15fa2a758ea8392372de31c0f635cc0d93/doxypypy/doxypypy.py#L25-L32 | def coroutine(func):
"""Basic decorator to implement the coroutine pattern."""
def __start(*args, **kwargs):
"""Automatically calls next() on the internal generator function."""
__cr = func(*args, **kwargs)
next(__cr)
return __cr
return __start | [
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gwastro/pycbc | pycbc/workflow/datafind.py | https://github.com/gwastro/pycbc/blob/7a64cdd104d263f1b6ea0b01e6841837d05a4cb3/pycbc/workflow/datafind.py#L835-L887 | def get_segment_summary_times(scienceFile, segmentName):
"""
This function will find the times for which the segment_summary is set
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Parameters
-----------
scienceFile : SegFile
The segment file that we want to use to determine this.
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Nike-Inc/cerberus-python-client | cerberus/client.py | https://github.com/Nike-Inc/cerberus-python-client/blob/ef38356822e722fcb6a6ed4a1b38a5b493e753ae/cerberus/client.py#L523-L539 | def _get_secrets(self, secure_data_path, version=None):
"""
Return full json secrets based on the secure data path
Keyword arguments:
secure_data_path (string) -- full path in the secret deposit box that contains the key
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RedHatInsights/insights-core | insights/core/__init__.py | https://github.com/RedHatInsights/insights-core/blob/b57cbf8ed7c089672426ede0441e0a4f789ef4a1/insights/core/__init__.py#L638-L680 | def get_elements(self, element, xmlns=None):
"""
Return a list of elements those match the searching condition.
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If the XML input has namespaces, elements and attributes with prefixes
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prefix is replaced by the full URI. Also, if there is a default
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Jaymon/captain | captain/echo.py | https://github.com/Jaymon/captain/blob/4297f32961d423a10d0f053bc252e29fbe939a47/captain/echo.py#L101-L122 | def progress(length, **kwargs):
"""display a progress that can update in place
example --
total_length = 1000
with echo.progress(total_length) as p:
for x in range(total_length):
# do something crazy
p.update(x)
length -- int -- the total size o... | [
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example --
total_length = 1000
with echo.progress(total_length) as p:
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# do something crazy
p.update(x)
length -- int -- the total size of what you will be updating progress on | [
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