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BD2KGenomics/toil-scripts | src/toil_scripts/exome_variant_pipeline/exome_variant_pipeline.py | https://github.com/BD2KGenomics/toil-scripts/blob/f878d863defcdccaabb7fe06f991451b7a198fb7/src/toil_scripts/exome_variant_pipeline/exome_variant_pipeline.py#L85-L96 | def index_bams(job, config):
"""
Convenience job for handling bam indexing to make the workflow declaration cleaner
:param JobFunctionWrappingJob job: passed automatically by Toil
:param Namespace config: Argparse Namespace object containing argument inputs
"""
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lesscpy/lesscpy | lesscpy/lessc/parser.py | https://github.com/lesscpy/lesscpy/blob/51e392fb4a3cd4ccfb6175e0e42ce7d2f6b78126/lesscpy/lessc/parser.py#L226-L271 | def p_statement_import(self, p):
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apache/incubator-heron | heron/tools/tracker/src/python/topology.py | https://github.com/apache/incubator-heron/blob/ad10325a0febe89ad337e561ebcbe37ec5d9a5ac/heron/tools/tracker/src/python/topology.py#L95-L102 | def unregister_watch(self, uid):
"""
Unregister the watch with the given UUID.
"""
# Do not raise an error if UUID is
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Log.info("Unregister a watch with uid: " + str(uid))
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nerdvegas/rez | src/build_utils/virtualenv/virtualenv.py | https://github.com/nerdvegas/rez/blob/1d3b846d53b5b5404edfe8ddb9083f9ceec8c5e7/src/build_utils/virtualenv/virtualenv.py#L1569-L1591 | def resolve_interpreter(exe):
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bdcht/grandalf | grandalf/layouts.py | https://github.com/bdcht/grandalf/blob/b0a604afa79e5201eebe5feb56ae5ec7afc07b95/grandalf/layouts.py#L378-L404 | def init_all(self,roots=None,inverted_edges=None,optimize=False):
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Parameters:
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wtsi-hgi/consul-lock | consullock/managers.py | https://github.com/wtsi-hgi/consul-lock/blob/deb07ab41dabbb49f4d0bbc062bc3b4b6e5d71b2/consullock/managers.py#L296-L305 | def release_all(self, keys: Sequence[str]) -> Set[str]:
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saltstack/salt | salt/modules/status.py | https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/status.py#L444-L604 | def meminfo():
'''
Return the memory info for this minion
.. versionchanged:: 2016.11.4
Added support for AIX
.. versionchanged:: 2018.3.0
Added support for OpenBSD
CLI Example:
.. code-block:: bash
salt '*' status.meminfo
'''
def linux_meminfo():
'''... | [
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mushkevych/scheduler | synergy/scheduler/state_machine_recomputing.py | https://github.com/mushkevych/scheduler/blob/6740331360f49083c208085fb5a60ce80ebf418b/synergy/scheduler/state_machine_recomputing.py#L65-L75 | def _compute_and_transfer_to_final_run(self, process_name, start_timeperiod, end_timeperiod, job_record):
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globocom/GloboNetworkAPI-client-python | networkapiclient/Ip.py | https://github.com/globocom/GloboNetworkAPI-client-python/blob/cf34f913da48d9abbf750114f5d2ac4b2dde137d/networkapiclient/Ip.py#L241-L273 | def check_vip_ip(self, ip, id_evip):
"""
Get a Ipv4 or Ipv6 for Vip request
:param ip: IPv4 or Ipv6. 'xxx.xxx.xxx.xxx or xxxx:xxxx:xxxx:xxxx:xxxx:xxxx:xxxx:xxxx'
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ulfalizer/Kconfiglib | examples/print_config_tree.py | https://github.com/ulfalizer/Kconfiglib/blob/9fe13c03de16c341cd7ed40167216207b821ea50/examples/print_config_tree.py#L104-L154 | def node_str(node):
"""
Returns the complete menu entry text for a menu node, or "" for invisible
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rndusr/torf | torf/_torrent.py | https://github.com/rndusr/torf/blob/df0363232daacd3f8c91aafddaa0623b8c28cbd2/torf/_torrent.py#L966-L988 | def read(cls, filepath, validate=True):
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Read torrent metainfo from file
:param filepath: Path of the torrent file
:param bool validate: Whether to run :meth:`validate` on the new Torrent
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BernardFW/bernard | src/bernard/platforms/telegram/platform.py | https://github.com/BernardFW/bernard/blob/9c55703e5ffe5717c9fa39793df59dbfa5b4c5ab/src/bernard/platforms/telegram/platform.py#L591-L599 | async def _deferred_init(self):
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Register the web hook onto which Telegram should send its messages.
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hook_path = self.make_hook_path()
url = urljoin(settings.BERNARD_BASE_URL, hook_path)
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chrislim2888/IP2Location-Python | IP2Location.py | https://github.com/chrislim2888/IP2Location-Python/blob/6b2a7d3a5e61c9f8efda5ae96c7064f9a7714621/IP2Location.py#L342-L359 | def _parse_addr(self, addr):
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ipv = 0
try:
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knipknap/exscript | Exscript/stdlib/connection.py | https://github.com/knipknap/exscript/blob/72718eee3e87b345d5a5255be9824e867e42927b/Exscript/stdlib/connection.py#L278-L288 | def set_timeout(scope, timeout):
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saltstack/salt | salt/utils/cloud.py | https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/utils/cloud.py#L301-L344 | def minion_config(opts, vm_):
'''
Return a minion's configuration for the provided options and VM
'''
# Don't start with a copy of the default minion opts; they're not always
# what we need. Some default options are Null, let's set a reasonable default
minion = {
'master': 'salt',
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pyqg/pyqg | pyqg/diagnostic_tools.py | https://github.com/pyqg/pyqg/blob/4f41584a12bcbf8657785b8cb310fa5065ecabd1/pyqg/diagnostic_tools.py#L53-L86 | def calc_ispec(model, ph):
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Parameters
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model : pyqg.Model instance
The model object from which `ph` originates
ph : complex array
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googledatalab/pydatalab | google/datalab/stackdriver/commands/_monitoring.py | https://github.com/googledatalab/pydatalab/blob/d9031901d5bca22fe0d5925d204e6698df9852e1/google/datalab/stackdriver/commands/_monitoring.py#L102-L108 | def _monitoring_groups_list(args, _):
"""Lists the groups in the project."""
project_id = args['project']
pattern = args['name'] or '*'
groups = gcm.Groups(context=_make_context(project_id))
dataframe = groups.as_dataframe(pattern=pattern)
return _render_dataframe(dataframe) | [
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shoppimon/figcan | figcan/figcan.py | https://github.com/shoppimon/figcan/blob/bdfa59ceed33277c060fc009fbf44c41b9852681/figcan/figcan.py#L109-L130 | def _recursive_merge(dct, merge_dct, raise_on_missing):
# type: (Dict[str, Any], Dict[str, Any], bool) -> Dict[str, Any]
"""Recursive dict merge
This modifies `dct` in place. Use `copy.deepcopy` if this behavior is not desired.
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Rapptz/discord.py | discord/guild.py | https://github.com/Rapptz/discord.py/blob/05d4f7f9620ef33635d6ac965b26528e09cdaf5b/discord/guild.py#L379-L385 | def system_channel(self):
"""Optional[:class:`TextChannel`]: Returns the guild's channel used for system messages.
Currently this is only for new member joins. If no channel is set, then this returns ``None``.
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channel_id = self._system_channel_id
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Arvedui/picuplib | picuplib/upload.py | https://github.com/Arvedui/picuplib/blob/c8a5d1542dbd421e84afd5ee81fe76efec89fb95/picuplib/upload.py#L183-L223 | def upload(apikey, picture, resize=None, rotation='00', noexif=False,
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prepares post for regular upload
:param str apikey: Apikey needed for Autentication on picflash.
:param str/tuple/list picture: Path to picture as str or picture data. \
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SylvanasSun/FishFishJump | fish_searcher/views/search.py | https://github.com/SylvanasSun/FishFishJump/blob/696212d242d8d572f3f1b43925f3d8ab8acc6a2d/fish_searcher/views/search.py#L131-L147 | def generate_key(url, page_number):
"""
>>> url_a = 'http://localhost:5009/search?keywords=a'
>>> generate_key(url_a, 10)
'http://localhost:5009/search?keywords=a&page=10'
>>> url_b = 'http://localhost:5009/search?keywords=b&page=1'
>>> generate_key(url_b, 10)
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gitpython-developers/GitPython | git/index/fun.py | https://github.com/gitpython-developers/GitPython/blob/1f66e25c25cde2423917ee18c4704fff83b837d1/git/index/fun.py#L111-L156 | def write_cache(entries, stream, extension_data=None, ShaStreamCls=IndexFileSHA1Writer):
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pytest-dev/pytest-xdist | xdist/scheduler/loadscope.py | https://github.com/pytest-dev/pytest-xdist/blob/9fcf8fa636bc69ee6cac9348a6ec20c87f2bb5e4/xdist/scheduler/loadscope.py#L322-L380 | def schedule(self):
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saltstack/salt | salt/modules/network.py | https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/network.py#L270-L283 | def _ppid():
'''
Return a dict of pid to ppid mappings
'''
ret = {}
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cmd = 'ps -a -o pid,ppid | tail +2'
else:
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out = __salt__['cmd.run'](cmd, python_shell=True)
for line in out.splitlines():
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odlgroup/odl | odl/space/pspace.py | https://github.com/odlgroup/odl/blob/b8443f6aca90e191ba36c91d32253c5a36249a6c/odl/space/pspace.py#L372-L388 | def dtype(self):
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automl/HpBandSter | hpbandster/examples/plot_example_7_interactive_plot.py | https://github.com/automl/HpBandSter/blob/841db4b827f342e5eb7f725723ea6461ac52d45a/hpbandster/examples/plot_example_7_interactive_plot.py#L39-L51 | def realtime_learning_curves(runs):
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example how to extract a different kind of learning curve.
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Cymmetria/honeycomb | honeycomb/utils/config_utils.py | https://github.com/Cymmetria/honeycomb/blob/33ea91b5cf675000e4e85dd02efe580ea6e95c86/honeycomb/utils/config_utils.py#L30-L38 | def validate_config(config_json, fields):
"""Validate a JSON file configuration against list of :obj:`honeycomb.defs.ConfigField`."""
for field_name, validator_obj in six.iteritems(fields):
field_value = config_json.get(field_name, None)
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ArangoDB-Community/pyArango | pyArango/graph.py | https://github.com/ArangoDB-Community/pyArango/blob/dd72e5f6c540e5e148943d615ddf7553bb78ce0b/pyArango/graph.py#L142-L170 | def createEdge(self, collectionName, _fromId, _toId, edgeAttributes, waitForSync = False) :
"""creates an edge between two documents"""
if not _fromId :
raise ValueError("Invalid _fromId: %s" % _fromId)
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reingart/pyafipws | utils.py | https://github.com/reingart/pyafipws/blob/ee87cfe4ac12285ab431df5fec257f103042d1ab/utils.py#L228-L304 | def Conectar(self, cache=None, wsdl=None, proxy="", wrapper=None, cacert=None, timeout=30, soap_server=None):
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Shoobx/xmldiff | xmldiff/main.py | https://github.com/Shoobx/xmldiff/blob/ec7835bce9ba69ff4ce03ab6c11397183b6f8411/xmldiff/main.py#L129-L143 | def patch_file(actions, tree):
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tree = etree.parse(tree)
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etcher-be/elib_miz | elib_miz/mission.py | https://github.com/etcher-be/elib_miz/blob/f28db58fadb2cd9341e0ae4d65101c0cc7d8f3d7/elib_miz/mission.py#L597-L614 | def get_country_by_id(self, country_id) -> 'Country':
"""
Gets a country in this coalition by its ID
Args:
country_id: country Id
Returns: Country
"""
VALID_POSITIVE_INT.validate(country_id, 'get_country_by_id', exc=ValueError)
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JdeRobot/base | src/drivers/MAVLinkServer/MAVProxy/pymavlink/dialects/v10/matrixpilot.py | https://github.com/JdeRobot/base/blob/303b18992785b2fe802212f2d758a60873007f1f/src/drivers/MAVLinkServer/MAVProxy/pymavlink/dialects/v10/matrixpilot.py#L8392-L8409 | def serial_udb_extra_f14_send(self, sue_WIND_ESTIMATION, sue_GPS_TYPE, sue_DR, sue_BOARD_TYPE, sue_AIRFRAME, sue_RCON, sue_TRAP_FLAGS, sue_TRAP_SOURCE, sue_osc_fail_count, sue_CLOCK_CONFIG, sue_FLIGHT_PLAN_TYPE, force_mavlink1=False):
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apple/turicreate | src/unity/python/turicreate/meta/decompiler/disassemble.py | https://github.com/apple/turicreate/blob/74514c3f99e25b46f22c6e02977fe3da69221c2e/src/unity/python/turicreate/meta/decompiler/disassemble.py#L29-L92 | def print_code(co, lasti= -1, level=0):
"""Disassemble a code object."""
code = co.co_code
for constant in co.co_consts:
print( '| |' * level, end=' ')
print( 'constant:', constant)
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n = len... | [
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F5Networks/f5-common-python | f5/bigip/mixins.py | https://github.com/F5Networks/f5-common-python/blob/7e67d5acd757a60e3d5f8c88c534bd72208f5494/f5/bigip/mixins.py#L243-L263 | def _exec_cmd(self, command, **kwargs):
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Capitains/MyCapytain | MyCapytain/common/metadata.py | https://github.com/Capitains/MyCapytain/blob/b11bbf6b6ae141fc02be70471e3fbf6907be6593/MyCapytain/common/metadata.py#L72-L87 | def add(self, key, value, lang=None):
""" Add a triple to the graph related to this node
:param key: Predicate of the triple
:param value: Object of the triple
:param lang: Language of the triple if applicable
"""
if not isinstance(value, Literal) and lang is not None:
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odlgroup/odl | odl/phantom/geometric.py | https://github.com/odlgroup/odl/blob/b8443f6aca90e191ba36c91d32253c5a36249a6c/odl/phantom/geometric.py#L706-L764 | def smooth_cuboid(space, min_pt=None, max_pt=None, axis=0):
"""Cuboid with smooth variations.
Parameters
----------
space : `DiscreteLp`
Discretized space in which the phantom is supposed to be created.
min_pt : array-like of shape ``(space.ndim,)``, optional
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O365/python-o365 | O365/excel.py | https://github.com/O365/python-o365/blob/02a71cf3775cc6a3c042e003365d6a07c8c75a73/O365/excel.py#L1613-L1634 | def add_named_range(self, name, reference, comment='', is_formula=False):
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JdeRobot/base | src/drivers/MAVLinkServer/MAVProxy/pymavlink/dialects/v10/matrixpilot.py | https://github.com/JdeRobot/base/blob/303b18992785b2fe802212f2d758a60873007f1f/src/drivers/MAVLinkServer/MAVProxy/pymavlink/dialects/v10/matrixpilot.py#L12161-L12174 | def terrain_report_encode(self, lat, lon, spacing, terrain_height, current_height, pending, loaded):
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markuskiller/textblob-de | textblob_de/ext/_pattern/text/search.py | https://github.com/markuskiller/textblob-de/blob/1b427b2cdd7e5e9fd3697677a98358fae4aa6ad1/textblob_de/ext/_pattern/text/search.py#L487-L546 | def fromstring(cls, s, **kwargs):
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python-cmd2/cmd2 | cmd2/cmd2.py | https://github.com/python-cmd2/cmd2/blob/b22c0bd891ed08c8b09df56df9d91f48166a5e2a/cmd2/cmd2.py#L2037-L2069 | def onecmd(self, statement: Union[Statement, str]) -> bool:
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sorgerlab/indra | indra/sources/trips/processor.py | https://github.com/sorgerlab/indra/blob/79a70415832c5702d7a820c7c9ccc8e25010124b/indra/sources/trips/processor.py#L1710-L1721 | def _stmt_location_to_agents(stmt, location):
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horazont/aioxmpp | aioxmpp/stringprep.py | https://github.com/horazont/aioxmpp/blob/22a68e5e1d23f2a4dee470092adbd4672f9ef061/aioxmpp/stringprep.py#L107-L117 | def check_prohibited_output(chars, bad_tables):
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inasafe/inasafe | safe/defaults.py | https://github.com/inasafe/inasafe/blob/831d60abba919f6d481dc94a8d988cc205130724/safe/defaults.py#L18-L28 | def default_provenance():
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:rtype: str
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knagra/farnsworth | events/ajax.py | https://github.com/knagra/farnsworth/blob/1b6589f0d9fea154f0a1e2231ed906764ed26d26/events/ajax.py#L12-L37 | def build_ajax_rsvps(event, user_profile):
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tensorpack/tensorpack | tensorpack/train/base.py | https://github.com/tensorpack/tensorpack/blob/d7a13cb74c9066bc791d7aafc3b744b60ee79a9f/tensorpack/train/base.py#L142-L165 | def _register_callback(self, cb):
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Register callbacks to the trainer.
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crate/crate-python | src/crate/client/http.py | https://github.com/crate/crate-python/blob/68e39c95f5bbe88b74bbfa26de4347fc644636a8/src/crate/client/http.py#L369-L378 | def blob_get(self, table, digest, chunk_size=1024 * 128):
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junzis/pyModeS | pyModeS/decoder/bds/bds40.py | https://github.com/junzis/pyModeS/blob/8cd5655a04b08171a9ad5f1ffd232b7e0178ea53/pyModeS/decoder/bds/bds40.py#L25-L65 | def is40(msg):
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patrickfuller/imolecule | imolecule/json_formatter.py | https://github.com/patrickfuller/imolecule/blob/07e91600c805123935a78782871414754bd3696d/imolecule/json_formatter.py#L37-L45 | def default(self, obj):
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zakdoek/django-simple-resizer | simple_resizer/__init__.py | https://github.com/zakdoek/django-simple-resizer/blob/5614eb1717948c65d179c3d1567439a8c90a4d44/simple_resizer/__init__.py#L60-L144 | def _resize(image, width, height, crop):
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FPGAwars/apio | apio/managers/scons.py | https://github.com/FPGAwars/apio/blob/5c6310f11a061a760764c6b5847bfb431dc3d0bc/apio/managers/scons.py#L301-L326 | def run(self, command, variables=[], board=None, packages=[]):
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pypa/pipenv | pipenv/vendor/toml/encoder.py | https://github.com/pypa/pipenv/blob/cae8d76c210b9777e90aab76e9c4b0e53bb19cde/pipenv/vendor/toml/encoder.py#L11-L29 | def dump(o, f):
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wangwenpei/fantasy | fantasy/utils.py | https://github.com/wangwenpei/fantasy/blob/0fe92059bd868f14da84235beb05b217b1d46e4a/fantasy/utils.py#L29-L38 | def config_value(key, app=None, default=None, prefix='hive_'):
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theosysbio/means | src/means/io/sbml.py | https://github.com/theosysbio/means/blob/fe164916a1d84ab2a4fa039871d38ccdf638b1db/src/means/io/sbml.py#L55-L125 | def read_sbml(filename):
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pszafer/epson_projector | epson_projector/main.py | https://github.com/pszafer/epson_projector/blob/b8a10ace56e0a5cf858546041819c0e7ebca208f/epson_projector/main.py#L52-L56 | def __initLock(self):
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DLR-RM/RAFCON | source/rafcon/gui/mygaphas/items/line.py | https://github.com/DLR-RM/RAFCON/blob/24942ef1a904531f49ab8830a1dbb604441be498/source/rafcon/gui/mygaphas/items/line.py#L309-L316 | def _head_length(self, port):
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JonathanRaiman/ciseau | ciseau/word_tokenizer.py | https://github.com/JonathanRaiman/ciseau/blob/f72d1c82d85eeb3d3ac9fac17690041725402175/ciseau/word_tokenizer.py#L185-L260 | def tokenize(text, normalize_ascii=True):
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Azure/azure-storage-python | azure-storage-queue/azure/storage/queue/queueservice.py | https://github.com/Azure/azure-storage-python/blob/52327354b192cbcf6b7905118ec6b5d57fa46275/azure-storage-queue/azure/storage/queue/queueservice.py#L414-L450 | def list_queues(self, prefix=None, num_results=None, include_metadata=False,
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rigetti/quantumflow | quantumflow/visualization.py | https://github.com/rigetti/quantumflow/blob/13a66cabbe8aabf6e023cc675f4a4ebe6ccda8fb/quantumflow/visualization.py#L308-L327 | def circuit_to_image(circ: Circuit,
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Robpol86/flake8-pydocstyle | flake8_pydocstyle.py | https://github.com/Robpol86/flake8-pydocstyle/blob/657425541e1d868a6a5241a83c3a16a9a715d6b5/flake8_pydocstyle.py#L20-L43 | def load_file(filename):
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JelteF/PyLaTeX | pylatex/tikz.py | https://github.com/JelteF/PyLaTeX/blob/62d9d9912ce8445e6629cdbcb80ad86143a1ed23/pylatex/tikz.py#L230-L247 | def dumps(self):
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pandas-dev/pandas | pandas/plotting/_core.py | https://github.com/pandas-dev/pandas/blob/9feb3ad92cc0397a04b665803a49299ee7aa1037/pandas/plotting/_core.py#L3248-L3293 | def hist(self, by=None, bins=10, **kwds):
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jaraco/keyring | keyring/backends/SecretService.py | https://github.com/jaraco/keyring/blob/71c798378e365286b7cc03c06e4d7d24c7de8fc4/keyring/backends/SecretService.py#L61-L72 | def get_password(self, service, username):
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alecthomas/voluptuous | voluptuous/schema_builder.py | https://github.com/alecthomas/voluptuous/blob/36c8c11e2b7eb402c24866fa558473661ede9403/voluptuous/schema_builder.py#L598-L653 | def _compile_sequence(self, schema, seq_type):
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saltstack/salt | salt/utils/virtualbox.py | https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/utils/virtualbox.py#L436-L475 | def vb_start_vm(name=None, timeout=10000, **kwargs):
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saltstack/salt | salt/states/netsnmp.py | https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/states/netsnmp.py#L133-L141 | def _str_elem(config, key):
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CitrineInformatics/python-citrination-client | citrination_client/base/base_client.py | https://github.com/CitrineInformatics/python-citrination-client/blob/409984fc65ce101a620f069263f155303492465c/citrination_client/base/base_client.py#L96-L110 | def _post(self, route, data, headers=None, failure_message=None):
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bhmm/bhmm | bhmm/estimators/maximum_likelihood.py | https://github.com/bhmm/bhmm/blob/9804d18c2ddb684fb4d90b544cc209617a89ca9a/bhmm/estimators/maximum_likelihood.py#L332-L352 | def compute_viterbi_paths(self):
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seleniumbase/SeleniumBase | seleniumbase/fixtures/base_case.py | https://github.com/seleniumbase/SeleniumBase/blob/62e5b43ee1f90a9ed923841bdd53b1b38358f43a/seleniumbase/fixtures/base_case.py#L906-L965 | def create_shepherd_tour(self, name=None, theme=None):
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paulovn/sparql-kernel | sparqlkernel/connection.py | https://github.com/paulovn/sparql-kernel/blob/1d2d155ff5da72070cb2a98fae33ea8113fac782/sparqlkernel/connection.py#L181-L190 | def lang_match_xml(row, accepted_languages):
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secdev/scapy | scapy/layers/l2.py | https://github.com/secdev/scapy/blob/3ffe757c184017dd46464593a8f80f85abc1e79a/scapy/layers/l2.py#L736-L785 | def arpleak(target, plen=255, hwlen=255, **kargs):
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thelabnyc/wagtail_blog | blog/management/commands/wordpress_to_wagtail.py | https://github.com/thelabnyc/wagtail_blog/blob/7e092c02d10ec427c9a2c4b5dcbe910d88c628cf/blog/management/commands/wordpress_to_wagtail.py#L64-L99 | def handle(self, *args, **options):
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pyrogram/pyrogram | pyrogram/client/client.py | https://github.com/pyrogram/pyrogram/blob/e7258a341ba905cfa86264c22040654db732ec1c/pyrogram/client/client.py#L1315-L1386 | def resolve_peer(self,
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dslackw/slpkg | slpkg/pkg/manager.py | https://github.com/dslackw/slpkg/blob/dd2e08a80e944d337d157b992167ba631a4343de/slpkg/pkg/manager.py#L524-L539 | def list_lib(self, repo):
"""Return package lists
"""
packages = ""
if repo == "sbo":
if (os.path.isfile(
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ChristopherRabotin/bungiesearch | bungiesearch/__init__.py | https://github.com/ChristopherRabotin/bungiesearch/blob/13768342bc2698b214eb0003c2d113b6e273c30d/bungiesearch/__init__.py#L132-L141 | def get_models(cls, index, as_class=False):
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chrissimpkins/crypto | lib/crypto/library/package.py | https://github.com/chrissimpkins/crypto/blob/6b95fa81b26312e46f02557dca0b5f5c898a76fd/lib/crypto/library/package.py#L28-L32 | def remove_tar_files(file_list):
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thunder-project/thunder | thunder/blocks/blocks.py | https://github.com/thunder-project/thunder/blob/967ff8f3e7c2fabe1705743d95eb2746d4329786/thunder/blocks/blocks.py#L89-L102 | def toseries(self):
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bcbio/bcbio-nextgen | bcbio/ngsalign/alignprep.py | https://github.com/bcbio/bcbio-nextgen/blob/6a9348c0054ccd5baffd22f1bb7d0422f6978b20/bcbio/ngsalign/alignprep.py#L64-L101 | def _set_align_split_size(data):
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KarchinLab/probabilistic2020 | prob2020/python/permutation.py | https://github.com/KarchinLab/probabilistic2020/blob/5d70583b0a7c07cfe32e95f3a70e05df412acb84/prob2020/python/permutation.py#L210-L357 | def hotmaps_permutation(obs_stat,
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stop_criteria=100,
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markovmodel/PyEMMA | pyemma/coordinates/data/util/traj_info_backends.py | https://github.com/markovmodel/PyEMMA/blob/5c3124398217de05ba5ce9c8fb01519222481ab8/pyemma/coordinates/data/util/traj_info_backends.py#L234-L257 | def _database_from_key(self, key):
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jwodder/doapi | doapi/doapi.py | https://github.com/jwodder/doapi/blob/b1306de86a01d8ae7b9c1fe2699765bb82e4f310/doapi/doapi.py#L955-L1025 | def _wait(self, objects, attr, value, wait_interval=None, wait_time=None):
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borntyping/python-riemann-client | riemann_client/command.py | https://github.com/borntyping/python-riemann-client/blob/3e181d90bdf685afd21c1ec5ee20e6840b011ea5/riemann_client/command.py#L57-L81 | def main(ctx, host, port, transport_type, timeout, ca_certs):
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ktdreyer/txkoji | txkoji/connection.py | https://github.com/ktdreyer/txkoji/blob/a7de380f29f745bf11730b27217208f6d4da7733/txkoji/connection.py#L393-L406 | def listChannels(self, **kwargs):
"""
Get information about all Koji channels.
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data = yield self.call('listChannels', **kwargs)
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marcocamma/datastorage | datastorage/datastorage.py | https://github.com/marcocamma/datastorage/blob/d88cdc08414c1c99d34d62e65fcbf807c3088a37/datastorage/datastorage.py#L233-L254 | def save(fname, d, link_copy=True,raiseError=False):
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roclark/sportsreference | sportsreference/nba/roster.py | https://github.com/roclark/sportsreference/blob/ea0bae432be76450e137671d2998eb38f962dffd/sportsreference/nba/roster.py#L442-L468 | def _parse_contract(self, player_info):
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Parse the player's contract.
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fabioz/PyDev.Debugger | pydevd.py | https://github.com/fabioz/PyDev.Debugger/blob/ed9c4307662a5593b8a7f1f3389ecd0e79b8c503/pydevd.py#L1172-L1231 | def set_suspend(self, thread, stop_reason, suspend_other_threads=False, is_pause=False):
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getsentry/raven-python | raven/contrib/django/client.py | https://github.com/getsentry/raven-python/blob/d891c20f0f930153f508e9d698d9de42e910face/raven/contrib/django/client.py#L104-L142 | def install_sql_hook():
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nccgroup/Scout2 | AWSScout2/services/iam.py | https://github.com/nccgroup/Scout2/blob/5d86d46d7ed91a92000496189e9cfa6b98243937/AWSScout2/services/iam.py#L244-L270 | def parse_users(self, user, params):
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bkeating/python-payflowpro | payflowpro/client.py | https://github.com/bkeating/python-payflowpro/blob/e74fc85135f171caa28277196fdcf7c7481ff298/payflowpro/client.py#L133-L174 | def _parse_parmlist(self, parmlist):
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ChristianKuehnel/btlewrap | btlewrap/gatttool.py | https://github.com/ChristianKuehnel/btlewrap/blob/1b7aec934529dcf03f5ecdccd0b09c25c389974f/btlewrap/gatttool.py#L19-L27 | def wrap_exception(func: Callable) -> Callable:
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def _func_wrapper(*args, **kwargs):
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codelv/enaml-native | src/enamlnative/android/android_view.py | https://github.com/codelv/enaml-native/blob/c33986e9eda468c508806e0a3e73c771401e5718/src/enamlnative/android/android_view.py#L330-L359 | def set_layout(self, layout):
""" Sets the LayoutParams of this widget.
Since the available properties that may be set for the layout params
depends on the parent, actual creation of the params is delegated to
the parent
Parameters
----------
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intel-analytics/BigDL | pyspark/bigdl/optim/optimizer.py | https://github.com/intel-analytics/BigDL/blob/e9c19788285986ab789a2e2998f9a85d7524779f/pyspark/bigdl/optim/optimizer.py#L1009-L1023 | def set_validation(self, batch_size, X_val, Y_val, trigger, val_method=None):
"""
Configure validation settings.
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aholkner/bacon | native/Vendor/FreeType/src/tools/glnames.py | https://github.com/aholkner/bacon/blob/edf3810dcb211942d392a8637945871399b0650d/native/Vendor/FreeType/src/tools/glnames.py#L5171-L5183 | def filter_glyph_names( alist, filter ):
"""filter `alist' by taking _out_ all glyph names that are in `filter'"""
count = 0
extras = []
for name in alist:
try:
filtered_index = filter.index( name )
except:
extras.append( name )
return extras | [
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ZeitOnline/briefkasten | application/briefkasten/dropbox.py | https://github.com/ZeitOnline/briefkasten/blob/ce6b6eeb89196014fe21d68614c20059d02daa11/application/briefkasten/dropbox.py#L376-L382 | def replies(self):
""" returns a list of strings """
fs_reply_path = join(self.fs_replies_path, 'message_001.txt')
if exists(fs_reply_path):
return [load(open(fs_reply_path, 'r'))]
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mixmastamyk/console | console/detection.py | https://github.com/mixmastamyk/console/blob/afe6c95d5a7b83d85376f450454e3769e4a5c3d0/console/detection.py#L336-L344 | def is_a_tty(stream=sys.stdout):
''' Detect terminal or something else, such as output redirection.
Returns:
Boolean, None: is tty or None if not found.
'''
result = stream.isatty() if hasattr(stream, 'isatty') else None
log.debug(result)
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IdentityPython/oidcendpoint | src/oidcendpoint/userinfo.py | https://github.com/IdentityPython/oidcendpoint/blob/6c1d729d51bfb6332816117fe476073df7a1d823/src/oidcendpoint/userinfo.py#L164-L188 | def userinfo_in_id_token_claims(endpoint_context, session, def_itc=None):
"""
Collect user info claims that are to be placed in the id token.
:param endpoint_context: Endpoint context
:param session: Session information
:param def_itc: Default ID Token claims
:return: User information or None
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scopus-api/scopus | scopus/utils/get_content.py | https://github.com/scopus-api/scopus/blob/27ce02dd3095bfdab9d3e8475543d7c17767d1ab/scopus/utils/get_content.py#L12-L49 | def detect_id_type(sid):
"""Method that tries to infer the type of abstract ID.
Parameters
----------
sid : str
The ID of an abstract on Scopus.
Raises
------
ValueError
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sid : str
The ID of an abstract on Scopus.
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ValueError
If the ID type cannot be inferred.
Notes
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PII usually has 17 chars, but in Scopus there are valid cases with only
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JelleAalbers/multihist | multihist.py | https://github.com/JelleAalbers/multihist/blob/072288277f807e7e388fdf424c3921c80576f3ab/multihist.py#L167-L171 | def density(self):
"""Gives emprical PDF, like np.histogram(...., density=True)"""
h = self.histogram.astype(np.float)
bindifs = np.array(np.diff(self.bin_edges), float)
return h / (bindifs * self.n) | [
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gem/oq-engine | openquake/hazardlib/geo/surface/base.py | https://github.com/gem/oq-engine/blob/8294553a0b8aba33fd96437a35065d03547d0040/openquake/hazardlib/geo/surface/base.py#L342-L375 | def get_resampled_top_edge(self, angle_var=0.1):
"""
This methods computes a simplified representation of a fault top edge
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:param float angle_var:
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nvbn/thefuck | thefuck/specific/sudo.py | https://github.com/nvbn/thefuck/blob/40ab4eb62db57627bff10cf029d29c94704086a2/thefuck/specific/sudo.py#L6-L18 | def sudo_support(fn, command):
"""Removes sudo before calling fn and adds it after."""
if not command.script.startswith('sudo '):
return fn(command)
result = fn(command.update(script=command.script[5:]))
if result and isinstance(result, six.string_types):
return u'sudo {}'.format(resul... | [
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] | python | train |
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