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projectatomic/atomic-reactor
atomic_reactor/core.py
https://github.com/projectatomic/atomic-reactor/blob/fd31c01b964097210bf169960d051e5f04019a80/atomic_reactor/core.py#L491-L520
def get_image_info_by_image_name(self, image, exact_tag=True): """ using `docker images`, provide information about an image :param image: ImageName, name of image :param exact_tag: bool, if false then return info for all images of the given name regardless wha...
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using `docker images`, provide information about an image :param image: ImageName, name of image :param exact_tag: bool, if false then return info for all images of the given name regardless what their tag is :return: list of dicts
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python
train
RudolfCardinal/pythonlib
cardinal_pythonlib/convert.py
https://github.com/RudolfCardinal/pythonlib/blob/0b84cb35f38bd7d8723958dae51b480a829b7227/cardinal_pythonlib/convert.py#L90-L98
def convert_attrs_to_bool(obj: Any, attrs: Iterable[str], default: bool = None) -> None: """ Applies :func:`convert_to_bool` to the specified attributes of an object, modifying it in place. """ for a in attrs: setattr(obj, a, convert_to_boo...
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Applies :func:`convert_to_bool` to the specified attributes of an object, modifying it in place.
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python
train
gwastro/pycbc
pycbc/filter/matchedfilter.py
https://github.com/gwastro/pycbc/blob/7a64cdd104d263f1b6ea0b01e6841837d05a4cb3/pycbc/filter/matchedfilter.py#L1101-L1120
def sigma(htilde, psd = None, low_frequency_cutoff=None, high_frequency_cutoff=None): """ Return the sigma of the waveform. See sigmasq for more details. Parameters ---------- htilde : TimeSeries or FrequencySeries The input vector containing a waveform. psd : {None, FrequencySeries...
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Return the sigma of the waveform. See sigmasq for more details. Parameters ---------- htilde : TimeSeries or FrequencySeries The input vector containing a waveform. psd : {None, FrequencySeries}, optional The psd used to weight the accumulated power. low_frequency_cutoff : {None, fl...
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python
train
sirfoga/pyhal
hal/streams/pretty_table.py
https://github.com/sirfoga/pyhal/blob/4394d8a1f7e45bea28a255ec390f4962ee64d33a/hal/streams/pretty_table.py#L111-L122
def get_blank_row(self, filler="-", splitter="+"): """Gets blank row :param filler: Fill empty columns with this char :param splitter: Separate columns with this char :return: Pretty formatted blank row (with no meaningful data in it) """ return self.get_pretty_row( ...
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Gets blank row :param filler: Fill empty columns with this char :param splitter: Separate columns with this char :return: Pretty formatted blank row (with no meaningful data in it)
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python
train
astropy/photutils
photutils/psf/epsf.py
https://github.com/astropy/photutils/blob/cc9bb4534ab76bac98cb5f374a348a2573d10401/photutils/psf/epsf.py#L862-L916
def _interpolate_missing_data(data, mask, method='cubic'): """ Interpolate missing data as identified by the ``mask`` keyword. Parameters ---------- data : 2D `~numpy.ndarray` An array containing the 2D image. mask : 2D bool `~numpy.ndarray` A 2D booleen mask array with the sam...
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Interpolate missing data as identified by the ``mask`` keyword. Parameters ---------- data : 2D `~numpy.ndarray` An array containing the 2D image. mask : 2D bool `~numpy.ndarray` A 2D booleen mask array with the same shape as the input ``data``, where a `True` value indicates t...
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python
train
BerkeleyAutomation/autolab_core
autolab_core/points.py
https://github.com/BerkeleyAutomation/autolab_core/blob/8f3813f6401972868cc5e3981ba1b4382d4418d5/autolab_core/points.py#L1201-L1212
def remove_zero_points(self): """Remove all elements where the norms and points are zero. Note ---- This returns nothing and updates the NormalCloud in-place. """ points_of_interest = np.where((np.linalg.norm(self.point_cloud.data, axis=0) != 0.0) & ...
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Remove all elements where the norms and points are zero. Note ---- This returns nothing and updates the NormalCloud in-place.
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python
train
why2pac/dp-tornado
dp_tornado/helper/serialization/json.py
https://github.com/why2pac/dp-tornado/blob/a5948f5693f6ee2d9bab31f611fedc074e1caa96/dp_tornado/helper/serialization/json.py#L17-L23
def parse(self, text, encoding='utf8', raise_exception=False): """Alias of helper.string.serialization.json.parse""" return self.helper.string.serialization.json.parse( text=text, encoding=encoding, raise_exception=raise_exception)
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Alias of helper.string.serialization.json.parse
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python
train
RJT1990/pyflux
pyflux/var/var.py
https://github.com/RJT1990/pyflux/blob/297f2afc2095acd97c12e827dd500e8ea5da0c0f/pyflux/var/var.py#L409-L433
def neg_loglik(self,beta): """ Creates the negative log-likelihood of the model Parameters ---------- beta : np.array Contains untransformed starting values for latent variables Returns ---------- The negative logliklihood of the model """ ...
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Creates the negative log-likelihood of the model Parameters ---------- beta : np.array Contains untransformed starting values for latent variables Returns ---------- The negative logliklihood of the model
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python
train
theislab/scanpy
scanpy/preprocessing/_recipes.py
https://github.com/theislab/scanpy/blob/9e4e5ee02e04cf618872d9b098e24f0542e8b227/scanpy/preprocessing/_recipes.py#L62-L119
def recipe_zheng17(adata, n_top_genes=1000, log=True, plot=False, copy=False): """Normalization and filtering as of [Zheng17]_. Reproduces the preprocessing of [Zheng17]_ - the Cell Ranger R Kit of 10x Genomics. Expects non-logarithmized data. If using logarithmized data, pass `log=False`. The re...
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Normalization and filtering as of [Zheng17]_. Reproduces the preprocessing of [Zheng17]_ - the Cell Ranger R Kit of 10x Genomics. Expects non-logarithmized data. If using logarithmized data, pass `log=False`. The recipe runs the following steps .. code:: python sc.pp.filter_genes(adata,...
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python
train
erdc/RAPIDpy
RAPIDpy/inflow/CreateInflowFileFromGriddedRunoff.py
https://github.com/erdc/RAPIDpy/blob/50e14e130554b254a00ff23b226cd7e4c6cfe91a/RAPIDpy/inflow/CreateInflowFileFromGriddedRunoff.py#L52-L86
def read_in_weight_table(self, in_weight_table): """ Read in weight table """ print("Reading the weight table...") with open_csv(in_weight_table, "r") as csvfile: reader = csv.reader(csvfile) header_row = next(reader) # check number of ...
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Read in weight table
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python
train
inasafe/inasafe
safe/plugin.py
https://github.com/inasafe/inasafe/blob/831d60abba919f6d481dc94a8d988cc205130724/safe/plugin.py#L170-L185
def _create_dock_toggle_action(self): """Create action for plugin dockable window (show/hide).""" # pylint: disable=W0201 icon = resources_path('img', 'icons', 'icon.svg') self.action_dock = QAction( QIcon(icon), self.tr('Toggle InaSAFE Dock'), self.iface.mainWind...
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Create action for plugin dockable window (show/hide).
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python
train
DataDog/integrations-core
sqlserver/datadog_checks/sqlserver/sqlserver.py
https://github.com/DataDog/integrations-core/blob/ebd41c873cf9f97a8c51bf9459bc6a7536af8acd/sqlserver/datadog_checks/sqlserver/sqlserver.py#L597-L611
def close_db_connections(self, instance, db_key, db_name=None): """ We close the db connections explicitly b/c when we don't they keep locks on the db. This presents as issues such as the SQL Server Agent being unable to stop. """ conn_key = self._conn_key(instance, db_ke...
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We close the db connections explicitly b/c when we don't they keep locks on the db. This presents as issues such as the SQL Server Agent being unable to stop.
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python
train
dpkp/kafka-python
kafka/consumer/fetcher.py
https://github.com/dpkp/kafka-python/blob/f6a8a38937688ea2cc5dc13d3d1039493be5c9b5/kafka/consumer/fetcher.py#L218-L245
def _reset_offset(self, partition): """Reset offsets for the given partition using the offset reset strategy. Arguments: partition (TopicPartition): the partition that needs reset offset Raises: NoOffsetForPartitionError: if no offset reset strategy is defined "...
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Reset offsets for the given partition using the offset reset strategy. Arguments: partition (TopicPartition): the partition that needs reset offset Raises: NoOffsetForPartitionError: if no offset reset strategy is defined
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python
train
botstory/botstory
botstory/ast/story_context/reducers.py
https://github.com/botstory/botstory/blob/9c5b2fc7f7a14dbd467d70f60d5ba855ef89dac3/botstory/ast/story_context/reducers.py#L161-L194
def scope_out(ctx): """ drop last stack item if: - we have reach the end of stack - and don't wait any input :param ctx: :return: """ logger.debug('# scope_out') logger.debug(ctx) # we reach the end of story line # so we could collapse previous scope and related stack item...
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drop last stack item if: - we have reach the end of stack - and don't wait any input :param ctx: :return:
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python
train
mkouhei/tonicdnscli
src/tonicdnscli/command.py
https://github.com/mkouhei/tonicdnscli/blob/df2d6fb2104ae4d49fa89d1bba2f3ccd2fed388c/src/tonicdnscli/command.py#L121-L136
def show(args): """Convert and print JSON. Argument: args: arguments object """ domain = check_infile(args.infile) action = True try: print(json.dumps(set_json(domain, action, filename=args.infile), sort_keys=True, indent=2)) except UnicodeDecodeErr...
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Convert and print JSON. Argument: args: arguments object
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python
train
neuropsychology/NeuroKit.py
examples/UnderDev/eeg/eeg_microstates.py
https://github.com/neuropsychology/NeuroKit.py/blob/c9589348fbbde0fa7e986048c48f38e6b488adfe/examples/UnderDev/eeg/eeg_microstates.py#L489-L547
def eeg_microstates_plot(method, path="", extension=".png", show_sensors_position=False, show_sensors_name=False, plot=True, save=True, dpi=150, contours=0, colorbar=False, separate=False): """ Plot the microstates. """ # Generate and store figures figures = [] names = [] # Check if microst...
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Plot the microstates.
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python
train
SetBased/py-stratum
pystratum/Constants.py
https://github.com/SetBased/py-stratum/blob/7c5ffaa2fdd03f865832a5190b5897ff2c0e3155/pystratum/Constants.py#L131-L142
def _read_configuration_file(self, config_filename): """ Reads parameters from the configuration file. :param str config_filename: The name of the configuration file. """ config = configparser.ConfigParser() config.read(config_filename) self._constants_filename ...
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Reads parameters from the configuration file. :param str config_filename: The name of the configuration file.
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python
train
e7dal/bubble3
behave4cmd0/textutil.py
https://github.com/e7dal/bubble3/blob/59c735281a95b44f6263a25f4d6ce24fca520082/behave4cmd0/textutil.py#L174-L188
def text_normalize(text): """ Whitespace normalization: - Strip empty lines - Strip leading whitespace in a line - Strip trailing whitespace in a line - Normalize line endings """ # if not isinstance(text, str): if isinstance(text, bytes): # -- MAYBE: command.ouput ...
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Whitespace normalization: - Strip empty lines - Strip leading whitespace in a line - Strip trailing whitespace in a line - Normalize line endings
[ "Whitespace", "normalization", ":" ]
python
train
senaite/senaite.core
bika/lims/browser/__init__.py
https://github.com/senaite/senaite.core/blob/7602ce2ea2f9e81eb34e20ce17b98a3e70713f85/bika/lims/browser/__init__.py#L86-L123
def ulocalized_time(time, long_format=None, time_only=None, context=None, request=None): """ This function gets ans string as time or a DateTime objects and returns a string with the time formatted :param time: The time to process :type time: str/DateTime :param long_format:...
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This function gets ans string as time or a DateTime objects and returns a string with the time formatted :param time: The time to process :type time: str/DateTime :param long_format: If True, return time in ling format :type portal_type: boolean/null :param time_only: If True, only returns tim...
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python
train
josiahcarlson/rom
rom/util.py
https://github.com/josiahcarlson/rom/blob/8b5607a856341df85df33422accc30ba9294dbdb/rom/util.py#L658-L670
def refresh_all(self, *objects, **kwargs): ''' This method is an alternate API for refreshing all entities tracked by the session. You can call:: session.refresh_all() session.refresh_all(force=True) And all entities known by the session will be reloaded from Re...
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python
test
assamite/creamas
creamas/core/simulation.py
https://github.com/assamite/creamas/blob/54dc3e31c97a3f938e58272f8ab80b6bcafeff58/creamas/core/simulation.py#L220-L229
def async_step(self): """Progress simulation by running all agents once asynchronously. """ assert len(self._agents_to_act) == 0 self._init_step() t = time.time() aiomas.run(until=self.env.trigger_all()) self._agents_to_act = [] self._step_processing_time ...
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Progress simulation by running all agents once asynchronously.
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python
train
quantmind/pulsar
examples/snippets/remote.py
https://github.com/quantmind/pulsar/blob/fee44e871954aa6ca36d00bb5a3739abfdb89b26/examples/snippets/remote.py#L8-L19
def remote_call(request, cls, method, args, kw): '''Command for executing remote calls on a remote object ''' actor = request.actor name = 'remote_%s' % cls.__name__ if not hasattr(actor, name): object = cls(actor) setattr(actor, name, object) else: object = getattr(actor...
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Command for executing remote calls on a remote object
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python
train
SheffieldML/GPy
GPy/kern/src/todo/symmetric.py
https://github.com/SheffieldML/GPy/blob/54c32d79d289d622fb18b898aee65a2a431d90cf/GPy/kern/src/todo/symmetric.py#L30-L41
def K(self,X,X2,target): """Compute the covariance matrix between X and X2.""" AX = np.dot(X,self.transform) if X2 is None: X2 = X AX2 = AX else: AX2 = np.dot(X2, self.transform) self.k.K(X,X2,target) self.k.K(AX,X2,target) self...
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Compute the covariance matrix between X and X2.
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python
train
Archived-Object/ligament
ligament/buildcontext.py
https://github.com/Archived-Object/ligament/blob/ff3d78130522676a20dc64086dc8a27b197cc20f/ligament/buildcontext.py#L126-L137
def resolve_dependency_graph(self, target): """ resolves the build order for interdependent build targets Assumes no cyclic dependencies """ targets = self.deep_dependendants(target) # print "deep dependants:", targets return sorted(targets, cmp...
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resolves the build order for interdependent build targets Assumes no cyclic dependencies
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python
train
bububa/pyTOP
pyTOP/packages/requests/models.py
https://github.com/bububa/pyTOP/blob/1e48009bcfe886be392628244b370e6374e1f2b2/pyTOP/packages/requests/models.py#L260-L282
def _encode_params(data): """Encode parameters in a piece of data. If the data supplied is a dictionary, encodes each parameter in it, and returns a list of tuples containing the encoded parameters, and a urlencoded version of that. Otherwise, assumes the data is already encode...
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Encode parameters in a piece of data. If the data supplied is a dictionary, encodes each parameter in it, and returns a list of tuples containing the encoded parameters, and a urlencoded version of that. Otherwise, assumes the data is already encoded appropriately, and returns ...
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python
train
ga4gh/ga4gh-common
ga4gh/common/utils.py
https://github.com/ga4gh/ga4gh-common/blob/ea1b562dce5bf088ac4577b838cfac7745f08346/ga4gh/common/utils.py#L182-L197
def getFilePathsWithExtensionsInDirectory(dirTree, patterns, sort=True): """ Returns all file paths that match any one of patterns in a file tree with its root at dirTree. Sorts the paths by default. """ filePaths = [] for root, dirs, files in os.walk(dirTree): for filePath in files: ...
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Returns all file paths that match any one of patterns in a file tree with its root at dirTree. Sorts the paths by default.
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python
train
CxAalto/gtfspy
gtfspy/import_loaders/stop_times_loader.py
https://github.com/CxAalto/gtfspy/blob/bddba4b74faae6c1b91202f19184811e326547e5/gtfspy/import_loaders/stop_times_loader.py#L97-L184
def calculate_trip_shape_breakpoints(conn): """Pre-compute the shape points corresponding to each trip's stop. Depends: shapes""" from gtfspy import shapes cur = conn.cursor() breakpoints_cache = {} # Counters for problems - don't print every problem. count_bad_shape_ordering = 0 coun...
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Pre-compute the shape points corresponding to each trip's stop. Depends: shapes
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python
valid
senaite/senaite.core
bika/lims/content/analysisservice.py
https://github.com/senaite/senaite.core/blob/7602ce2ea2f9e81eb34e20ce17b98a3e70713f85/bika/lims/content/analysisservice.py#L557-L566
def getAvailableInstruments(self): """ Returns the instruments available for this service. If the service has the getInstrumentEntryOfResults(), returns the instruments capable to perform this service. Otherwhise, returns an empty list. """ instruments = self....
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Returns the instruments available for this service. If the service has the getInstrumentEntryOfResults(), returns the instruments capable to perform this service. Otherwhise, returns an empty list.
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python
train
brocade/pynos
pynos/versions/base/interface.py
https://github.com/brocade/pynos/blob/bd8a34e98f322de3fc06750827d8bbc3a0c00380/pynos/versions/base/interface.py#L4079-L4138
def create_ve(self, **kwargs): """ Add Ve Interface . Args: ve_name: Ve name with which the Ve interface needs to be created. enable (bool): If vrf fowarding should be enabled or disabled.Default:``True``. get (bool) : Get config i...
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Add Ve Interface . Args: ve_name: Ve name with which the Ve interface needs to be created. enable (bool): If vrf fowarding should be enabled or disabled.Default:``True``. get (bool) : Get config instead of editing config. (True, False) ...
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python
train
ArchiveTeam/wpull
wpull/protocol/abstract/client.py
https://github.com/ArchiveTeam/wpull/blob/ddf051aa3322479325ba20aa778cb2cb97606bf5/wpull/protocol/abstract/client.py#L61-L70
def recycle(self): '''Clean up and return connections back to the pool. Connections should be kept alive if supported. ''' for connection in self._connections: self._connection_pool.no_wait_release(connection) self._connections.clear()
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Clean up and return connections back to the pool. Connections should be kept alive if supported.
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python
train
Opentrons/opentrons
api/src/opentrons/protocol_api/contexts.py
https://github.com/Opentrons/opentrons/blob/a7c15cc2636ecb64ab56c7edc1d8a57163aaeadf/api/src/opentrons/protocol_api/contexts.py#L1716-L1720
def close(self): """ Closes the lid""" self._geometry.lid_status = self._module.close() self._ctx.deck.recalculate_high_z() return self._geometry.lid_status
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Closes the lid
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python
train
KrzyHonk/bpmn-python
bpmn_python/graph/classes/root_element/process_type.py
https://github.com/KrzyHonk/bpmn-python/blob/6e5e28e3d656dbf5bd3d85d78fe8e3f2fb462629/bpmn_python/graph/classes/root_element/process_type.py#L34-L44
def set_process_type(self, value): """ Setter for 'process_type' field. :param value - a new value of 'process_type' field. """ if value is None or not isinstance(value, str): raise TypeError("ProcessType must be set to a String") elif value not in Process.__p...
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Setter for 'process_type' field. :param value - a new value of 'process_type' field.
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python
train
spyder-ide/spyder
spyder/app/mainwindow.py
https://github.com/spyder-ide/spyder/blob/f76836ce1b924bcc4efd3f74f2960d26a4e528e0/spyder/app/mainwindow.py#L2180-L2204
def update_search_menu(self): """Update search menu""" # Disabling all actions except the last one # (which is Find in files) to begin with for child in self.search_menu.actions()[:-1]: child.setEnabled(False) widget, textedit_properties = self.get_focus_widge...
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Update search menu
[ "Update", "search", "menu" ]
python
train
Jammy2211/PyAutoLens
autolens/lens/plotters/lens_fit_plotters.py
https://github.com/Jammy2211/PyAutoLens/blob/91e50369c7a9c048c83d217625578b72423cd5a7/autolens/lens/plotters/lens_fit_plotters.py#L45-L158
def plot_fit_subplot_lens_plane_only( fit, should_plot_mask=True, extract_array_from_mask=False, zoom_around_mask=False, positions=None, should_plot_image_plane_pix=False, units='arcsec', figsize=None, aspect='square', cmap='jet', norm='linear', norm_min=None, norm_max=None, linthresh=0....
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Plot the model datas_ of an analysis, using the *Fitter* class object. The visualization and output type can be fully customized. Parameters ----------- fit : autolens.lens.fitting.Fitter Class containing fit between the model datas_ and observed lens datas_ (including residual_map, chi_square...
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python
valid
apache/spark
python/pyspark/rdd.py
https://github.com/apache/spark/blob/618d6bff71073c8c93501ab7392c3cc579730f0b/python/pyspark/rdd.py#L922-L955
def aggregate(self, zeroValue, seqOp, combOp): """ Aggregate the elements of each partition, and then the results for all the partitions, using a given combine functions and a neutral "zero value." The functions C{op(t1, t2)} is allowed to modify C{t1} and return it as i...
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Aggregate the elements of each partition, and then the results for all the partitions, using a given combine functions and a neutral "zero value." The functions C{op(t1, t2)} is allowed to modify C{t1} and return it as its result value to avoid object allocation; however, it should not ...
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python
train
danielhrisca/asammdf
asammdf/blocks/mdf_v4.py
https://github.com/danielhrisca/asammdf/blob/3c7a1fd19c957ceebe4dcdbb2abf00806c2bdb66/asammdf/blocks/mdf_v4.py#L4915-L5162
def get_can_signal( self, name, database=None, db=None, ignore_invalidation_bits=False ): """ get CAN message signal. You can specify an external CAN database ( *database* argument) or canmatrix databse object that has already been loaded from a file (*db* argument). The sig...
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get CAN message signal. You can specify an external CAN database ( *database* argument) or canmatrix databse object that has already been loaded from a file (*db* argument). The signal name can be specified in the following ways * ``CAN<ID>.<MESSAGE_NAME>.<SIGNAL_NAME>`` - the `ID` val...
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python
train
bodylabs/lace
lace/meshviewer.py
https://github.com/bodylabs/lace/blob/b68f4a60a4cac66c0607ffbae38ef9d07d37f459/lace/meshviewer.py#L123-L140
def MeshViewers( shape=(1, 1), titlebar="Mesh Viewers", keepalive=False, window_width=1280, window_height=960 ): """Allows subplot-style inspection of primitives in multiple subwindows. Args: shape: a tuple indicating the number of vertical and horizontal windows requested Returns:...
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Allows subplot-style inspection of primitives in multiple subwindows. Args: shape: a tuple indicating the number of vertical and horizontal windows requested Returns: a list of lists of MeshViewer objects: one per window requested.
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python
train
blockstack/blockstack-files
blockstack_file/blockstack_file.py
https://github.com/blockstack/blockstack-files/blob/8d88cc48bdf8ed57f17d4bba860e972bde321921/blockstack_file/blockstack_file.py#L497-L560
def file_put( blockchain_id, hostname, recipient_blockchain_ids, data_name, input_path, passphrase=None, config_path=CONFIG_PATH, wallet_keys=None ): """ Send a file to the given recipient, encrypted and signed with the given blockchain ID. Allow each recipient to receive the data on each of their hosts...
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Send a file to the given recipient, encrypted and signed with the given blockchain ID. Allow each recipient to receive the data on each of their hosts. Return {'status': True} on success, and upload to cloud storage Return {'error': ...} on error
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python
train
rigetti/quantumflow
quantumflow/states.py
https://github.com/rigetti/quantumflow/blob/13a66cabbe8aabf6e023cc675f4a4ebe6ccda8fb/quantumflow/states.py#L131-L147
def expectation(self, diag_hermitian: bk.TensorLike, trials: int = None) -> bk.BKTensor: """Return the expectation of a measurement. Since we can only measure our computer in the computational basis, we only require the diagonal of the Hermitian in that basis. If the...
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Return the expectation of a measurement. Since we can only measure our computer in the computational basis, we only require the diagonal of the Hermitian in that basis. If the number of trials is specified, we sample the given number of times. Else we return the exact expectation (as if...
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python
train
brocade/pynos
pynos/versions/ver_6/ver_6_0_1/yang/brocade_ip_policy.py
https://github.com/brocade/pynos/blob/bd8a34e98f322de3fc06750827d8bbc3a0c00380/pynos/versions/ver_6/ver_6_0_1/yang/brocade_ip_policy.py#L1121-L1139
def hide_routemap_holder_route_map_content_set_origin_origin_igp(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") hide_routemap_holder = ET.SubElement(config, "hide-routemap-holder", xmlns="urn:brocade.com:mgmt:brocade-ip-policy") route_map = ET.SubElemen...
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Auto Generated Code
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python
train
domainaware/parsedmarc
parsedmarc/__init__.py
https://github.com/domainaware/parsedmarc/blob/ecc9fd434c23d896ccd1f35795ccc047f946ed05/parsedmarc/__init__.py#L519-L633
def parse_forensic_report(feedback_report, sample, msg_date, nameservers=None, dns_timeout=2.0, strip_attachment_payloads=False, parallel=False): """ Converts a DMARC forensic report and sample to a ``OrderedDict`` Args: ...
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Converts a DMARC forensic report and sample to a ``OrderedDict`` Args: feedback_report (str): A message's feedback report as a string sample (str): The RFC 822 headers or RFC 822 message sample msg_date (str): The message's date header nameservers (list): A list of one or more names...
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python
test
brentp/cruzdb
cruzdb/intersecter.py
https://github.com/brentp/cruzdb/blob/9068d46e25952f4a929dde0242beb31fa4c7e89a/cruzdb/intersecter.py#L194-L215
def right(self, f, n=1): """return the nearest n features strictly to the right of a Feature f. Overlapping features are not considered as to the right. f: a Feature object n: the number of features to return """ intervals = self.intervals[f.chrom] ilen = len(int...
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return the nearest n features strictly to the right of a Feature f. Overlapping features are not considered as to the right. f: a Feature object n: the number of features to return
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python
train
smarie/python-valid8
valid8/entry_points_annotations.py
https://github.com/smarie/python-valid8/blob/5e15d1de11602933c5114eb9f73277ad91d97800/valid8/entry_points_annotations.py#L714-L769
def decorate_with_validation(func, arg_name, # type: str *validation_func, # type: ValidationFuncs **kwargs): # type: (...) -> Callable """ This method is the inner method used in `@validate_io`, `@validate_arg`...
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This method is the inner method used in `@validate_io`, `@validate_arg` and `@validate_out`. It can be used if you with to perform decoration manually without a decorator. :param func: :param arg_name: the name of the argument to validate or _OUT_KEY for output validation :param validation_func: the va...
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python
train
mathandy/svgpathtools
svgpathtools/path.py
https://github.com/mathandy/svgpathtools/blob/fd7348a1dfd88b65ea61da02325c6605aedf8c4f/svgpathtools/path.py#L577-L582
def ilength(self, s, s_tol=ILENGTH_S_TOL, maxits=ILENGTH_MAXITS, error=ILENGTH_ERROR, min_depth=ILENGTH_MIN_DEPTH): """Returns a float, t, such that self.length(0, t) is approximately s. See the inv_arclength() docstring for more details.""" return inv_arclength(self, s, s_tol=s_...
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Returns a float, t, such that self.length(0, t) is approximately s. See the inv_arclength() docstring for more details.
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python
train
cloud-custodian/cloud-custodian
tools/c7n_gcp/c7n_gcp/client.py
https://github.com/cloud-custodian/cloud-custodian/blob/52ef732eb3d7bc939d1579faf519314814695c08/tools/c7n_gcp/c7n_gcp/client.py#L394-L418
def execute_paged_query(self, verb, verb_arguments): """Executes query (ex. list) via a dedicated http object. Args: verb (str): Method to execute on the component (ex. get, list). verb_arguments (dict): key-value pairs to be passed to _BuildRequest. Yields: ...
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Executes query (ex. list) via a dedicated http object. Args: verb (str): Method to execute on the component (ex. get, list). verb_arguments (dict): key-value pairs to be passed to _BuildRequest. Yields: dict: Service Response. Raises: Pagination...
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python
train
tensorflow/mesh
mesh_tensorflow/beam_search.py
https://github.com/tensorflow/mesh/blob/3921196e5e43302e820da0a87329f25d7e2a3016/mesh_tensorflow/beam_search.py#L577-L642
def greedy_decode(logits_fn, initial_ids, temperature=0.0, initial_states=None, eos_id=EOS_ID, forced_ids=None, use_tpu=True): """Greedy decoding. Args: logits_fn: Interface to the model, to provide logi...
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Greedy decoding. Args: logits_fn: Interface to the model, to provide logits. Shoud take: step_num - mtf Scalar ids - mtf Tensor with shape [..., length] states - list of mtf.Tensor Should return: logits - [batch, vocab_size] new_states - list of m...
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python
train
google/grumpy
third_party/stdlib/json/decoder.py
https://github.com/google/grumpy/blob/3ec87959189cfcdeae82eb68a47648ac25ceb10b/third_party/stdlib/json/decoder.py#L362-L371
def decode(self, s, _w=WHITESPACE.match): """Return the Python representation of ``s`` (a ``str`` or ``unicode`` instance containing a JSON document) """ obj, end = self.raw_decode(s, idx=_w(s, 0).end()) end = _w(s, end).end() if end != len(s): raise ValueErr...
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Return the Python representation of ``s`` (a ``str`` or ``unicode`` instance containing a JSON document)
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python
valid
SheffieldML/GPy
GPy/util/univariate_Gaussian.py
https://github.com/SheffieldML/GPy/blob/54c32d79d289d622fb18b898aee65a2a431d90cf/GPy/util/univariate_Gaussian.py#L14-L24
def inv_std_norm_cdf(x): """ Inverse cumulative standard Gaussian distribution Based on Winitzki, S. (2008) """ z = 2*x -1 ln1z2 = np.log(1-z**2) a = 8*(np.pi -3)/(3*np.pi*(4-np.pi)) b = 2/(np.pi * a) + ln1z2/2 inv_erf = np.sign(z) * np.sqrt( np.sqrt(b**2 - ln1z2/a) - b ) return ...
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Inverse cumulative standard Gaussian distribution Based on Winitzki, S. (2008)
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python
train
OpenGov/carpenter
carpenter/carpenter.py
https://github.com/OpenGov/carpenter/blob/0ab3c54c05133b9b0468c63e834a7ce3a6fb575b/carpenter/carpenter.py#L87-L97
def stitch_block_rows(block_list): ''' Stitches blocks together into a single block rowwise. These blocks are 2D tables usually generated from tableproc. The final block will be of dimensions (sum(num_rows), max(num_cols)). ''' stitched = list(itertools.chain(*block_list)) max_length = max...
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Stitches blocks together into a single block rowwise. These blocks are 2D tables usually generated from tableproc. The final block will be of dimensions (sum(num_rows), max(num_cols)).
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python
train
blazelibs/blazeutils
blazeutils/functional.py
https://github.com/blazelibs/blazeutils/blob/c94476325146007553cbddeeb9ef83394756babf/blazeutils/functional.py#L114-L122
def unzip(iterable): """Unzip/transpose an iterable of tuples into a tuple of lists. WARNING: When given an empty iterable, this returns an empty list instead of a tuple. If you need a consistent interface then do something like this: left, right = unzip(two_columned_list) or ([], []) """ ...
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Unzip/transpose an iterable of tuples into a tuple of lists. WARNING: When given an empty iterable, this returns an empty list instead of a tuple. If you need a consistent interface then do something like this: left, right = unzip(two_columned_list) or ([], [])
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python
train
bkad/python-stylus
stylus/__init__.py
https://github.com/bkad/python-stylus/blob/3d79145fecd56e6af9fb38d55886c65ce2cac82e/stylus/__init__.py#L31-L38
def use(self, plugin, arguments={}): """Add plugin to use during compilation. plugin: Plugin to include. arguments: Dictionary of arguments to pass to the import. """ self.plugins[plugin] = dict(arguments) return self.plugins
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Add plugin to use during compilation. plugin: Plugin to include. arguments: Dictionary of arguments to pass to the import.
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python
train
Azure/azure-cli-extensions
src/interactive/azext_interactive/azclishell/gather_commands.py
https://github.com/Azure/azure-cli-extensions/blob/3d4854205b0f0d882f688cfa12383d14506c2e35/src/interactive/azext_interactive/azclishell/gather_commands.py#L35-L68
def add_new_lines(long_phrase, line_min=None, tolerance=TOLERANCE): """ not everything fits on the screen, based on the size, add newlines """ if line_min is None: line_min = math.floor(int(_get_window_columns()) / 2 - 15) if long_phrase is None: return long_phrase line_min = int(line_m...
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not everything fits on the screen, based on the size, add newlines
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python
train
mrcagney/gtfstk
gtfstk/helpers.py
https://github.com/mrcagney/gtfstk/blob/c91494e6fefc02523889655a0dc92d1c0eee8d03/gtfstk/helpers.py#L187-L209
def get_convert_dist( dist_units_in: str, dist_units_out: str ) -> Callable[[float], float]: """ Return a function of the form distance in the units ``dist_units_in`` -> distance in the units ``dist_units_out`` Only supports distance units in :const:`constants.DIST_UNITS`. """ di, ...
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Return a function of the form distance in the units ``dist_units_in`` -> distance in the units ``dist_units_out`` Only supports distance units in :const:`constants.DIST_UNITS`.
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python
train
ThreatConnect-Inc/tcex
tcex/tcex_playbook.py
https://github.com/ThreatConnect-Inc/tcex/blob/dd4d7a1ef723af1561687120191886b9a2fd4b47/tcex/tcex_playbook.py#L59-L70
def _variable_pattern(self): """Regex pattern to match and parse a playbook variable.""" variable_pattern = r'#([A-Za-z]+)' # match literal (#App) at beginning of String variable_pattern += r':([\d]+)' # app id (:7979) variable_pattern += r':([A-Za-z0-9_\.\-\[\]]+)' # variable name (:...
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Regex pattern to match and parse a playbook variable.
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python
train
sorgerlab/indra
indra/assemblers/english/assembler.py
https://github.com/sorgerlab/indra/blob/79a70415832c5702d7a820c7c9ccc8e25010124b/indra/assemblers/english/assembler.py#L325-L330
def _assemble_gef(stmt): """Assemble Gef statements into text.""" subj_str = _assemble_agent_str(stmt.gef) obj_str = _assemble_agent_str(stmt.ras) stmt_str = subj_str + ' is a GEF for ' + obj_str return _make_sentence(stmt_str)
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Assemble Gef statements into text.
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python
train
brentp/cruzdb
cruzdb/sqlsoup.py
https://github.com/brentp/cruzdb/blob/9068d46e25952f4a929dde0242beb31fa4c7e89a/cruzdb/sqlsoup.py#L229-L238
def execute(self, stmt, **params): """Execute a SQL statement. The statement may be a string SQL string, an :func:`sqlalchemy.sql.expression.select` construct, or a :func:`sqlalchemy.sql.expression.text` construct. """ return self.session.execute(sql.text(stmt...
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Execute a SQL statement. The statement may be a string SQL string, an :func:`sqlalchemy.sql.expression.select` construct, or a :func:`sqlalchemy.sql.expression.text` construct.
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python
train
LonamiWebs/Telethon
telethon/extensions/html.py
https://github.com/LonamiWebs/Telethon/blob/1ead9757d366b58c1e0567cddb0196e20f1a445f/telethon/extensions/html.py#L117-L131
def parse(html): """ Parses the given HTML message and returns its stripped representation plus a list of the MessageEntity's that were found. :param message: the message with HTML to be parsed. :return: a tuple consisting of (clean message, [message entities]). """ if not html: ret...
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Parses the given HTML message and returns its stripped representation plus a list of the MessageEntity's that were found. :param message: the message with HTML to be parsed. :return: a tuple consisting of (clean message, [message entities]).
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python
train
fermiPy/fermipy
fermipy/diffuse/gt_split_and_mktime.py
https://github.com/fermiPy/fermipy/blob/9df5e7e3728307fd58c5bba36fd86783c39fbad4/fermipy/diffuse/gt_split_and_mktime.py#L38-L63
def make_full_path(basedir, outkey, origname): """Make a full file path by combining tokens Parameters ----------- basedir : str The top level output area outkey : str The key for the particular instance of the analysis origname : str Template for the output file name...
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Make a full file path by combining tokens Parameters ----------- basedir : str The top level output area outkey : str The key for the particular instance of the analysis origname : str Template for the output file name Returns ------- outpath : str T...
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python
train
yyuu/botornado
botornado/sqs/connection.py
https://github.com/yyuu/botornado/blob/fffb056f5ff2324d1d5c1304014cfb1d899f602e/botornado/sqs/connection.py#L98-L122
def get_queue_attributes(self, queue, attribute='All', callback=None): """ Gets one or all attributes of a Queue :type queue: A Queue object :param queue: The SQS queue to be deleted :type attribute: str :type attribute: The specific attribute requested. If not...
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Gets one or all attributes of a Queue :type queue: A Queue object :param queue: The SQS queue to be deleted :type attribute: str :type attribute: The specific attribute requested. If not supplied, the default is to return all attributes. ...
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python
train
tango-controls/pytango
tango/device_class.py
https://github.com/tango-controls/pytango/blob/9cf78c517c9cdc1081ff6d080a9646a740cc1d36/tango/device_class.py#L190-L206
def get_property_type(self, prop_name, properties): """ get_property_type(self, prop_name, properties) -> CmdArgType Gets the property type for the given property name using the information given in properties Parameters : ...
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get_property_type(self, prop_name, properties) -> CmdArgType Gets the property type for the given property name using the information given in properties Parameters : - prop_name : (str) property name - properties : (dict<...
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python
train
idank/bashlex
bashlex/parser.py
https://github.com/idank/bashlex/blob/800cb7e3c634eaa3c81f8a8648fd7fd4e27050ac/bashlex/parser.py#L355-L365
def p_elif_clause(p): '''elif_clause : ELIF compound_list THEN compound_list | ELIF compound_list THEN compound_list ELSE compound_list | ELIF compound_list THEN compound_list elif_clause''' parts = [] for i in range(1, len(p)): if isinstance(p[i], ast.node): ...
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elif_clause : ELIF compound_list THEN compound_list | ELIF compound_list THEN compound_list ELSE compound_list | ELIF compound_list THEN compound_list elif_clause
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python
train
pyviz/holoviews
examples/gallery/apps/bokeh/mandelbrot.py
https://github.com/pyviz/holoviews/blob/ae0dd2f3de448b0ca5e9065aabd6ef8d84c7e655/examples/gallery/apps/bokeh/mandelbrot.py#L17-L31
def mandel(x, y, max_iters): """ Given the real and imaginary parts of a complex number, determine if it is a candidate for membership in the Mandelbrot set given a fixed number of iterations. """ i = 0 c = complex(x,y) z = 0.0j for i in range(max_iters): z = z*z + c ...
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Given the real and imaginary parts of a complex number, determine if it is a candidate for membership in the Mandelbrot set given a fixed number of iterations.
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python
train
LettError/MutatorMath
Lib/mutatorMath/objects/location.py
https://github.com/LettError/MutatorMath/blob/10318fc4e7c9cee9df6130826829baea3054a42b/Lib/mutatorMath/objects/location.py#L606-L644
def sortLocations(locations): """ Sort the locations by ranking: 1. all on-axis points 2. all off-axis points which project onto on-axis points these would be involved in master to master interpolations necessary for patching. Projecting off-axis masters hav...
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Sort the locations by ranking: 1. all on-axis points 2. all off-axis points which project onto on-axis points these would be involved in master to master interpolations necessary for patching. Projecting off-axis masters have at least one coordin...
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python
train
opendatateam/udata
udata/i18n.py
https://github.com/opendatateam/udata/blob/f016585af94b0ff6bd73738c700324adc8ba7f8f/udata/i18n.py#L203-L209
def redirect_to_lang(*args, **kwargs): '''Redirect non lang-prefixed urls to default language.''' endpoint = request.endpoint.replace('_redirect', '') kwargs = multi_to_dict(request.args) kwargs.update(request.view_args) kwargs['lang_code'] = default_lang return redirect(url_for(endpoint, **kwar...
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Redirect non lang-prefixed urls to default language.
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python
train
inasafe/inasafe
safe/datastore/geopackage.py
https://github.com/inasafe/inasafe/blob/831d60abba919f6d481dc94a8d988cc205130724/safe/datastore/geopackage.py#L103-L117
def _vector_layers(self): """Return a list of vector layers available. :return: List of vector layers available in the geopackage. :rtype: list .. versionadded:: 4.0 """ layers = [] vector_datasource = self.vector_driver.Open( self.uri.absoluteFilePa...
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Return a list of vector layers available. :return: List of vector layers available in the geopackage. :rtype: list .. versionadded:: 4.0
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python
train
chainside/btcpy
btcpy/lib/base58.py
https://github.com/chainside/btcpy/blob/8e75c630dacf0f997ed0e0e8739bed428a95d7b1/btcpy/lib/base58.py#L37-L54
def b58decode(v: str) -> bytes: '''Decode a Base58 encoded string''' origlen = len(v) v = v.lstrip(alphabet[0]) newlen = len(v) p, acc = 1, 0 for c in v[::-1]: acc += p * alphabet.index(c) p *= 58 result = [] while acc > 0: acc, mod = divmod(acc, 256) r...
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Decode a Base58 encoded string
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python
train
allenai/allennlp
allennlp/semparse/domain_languages/domain_language.py
https://github.com/allenai/allennlp/blob/648a36f77db7e45784c047176074f98534c76636/allennlp/semparse/domain_languages/domain_language.py#L315-L333
def execute_action_sequence(self, action_sequence: List[str], side_arguments: List[Dict] = None): """ Executes the program defined by an action sequence directly, without needing the overhead of translating to a logical form first. For any given program, :func:`execute` and this functio...
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Executes the program defined by an action sequence directly, without needing the overhead of translating to a logical form first. For any given program, :func:`execute` and this function are equivalent, they just take different representations of the program, so you can use whichever is more ef...
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python
train
aparo/pyes
pyes/managers.py
https://github.com/aparo/pyes/blob/712eb6095961755067b2b5baa262008ade6584b3/pyes/managers.py#L610-L619
def nodes_info(self, nodes=None): """ The cluster :ref:`nodes info <es-guide-reference-api-admin-cluster-state>` API allows to retrieve one or more (or all) of the cluster nodes information. """ parts = ["_cluster", "nodes"] if nodes: parts.append(",".join(nod...
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The cluster :ref:`nodes info <es-guide-reference-api-admin-cluster-state>` API allows to retrieve one or more (or all) of the cluster nodes information.
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python
train
gem/oq-engine
openquake/hazardlib/gsim/cauzzi_2014.py
https://github.com/gem/oq-engine/blob/8294553a0b8aba33fd96437a35065d03547d0040/openquake/hazardlib/gsim/cauzzi_2014.py#L132-L136
def _get_distance_scaling_term(self, C, mag, rrup): """ Returns the distance scaling parameter """ return (C["r1"] + C["r2"] * mag) * np.log10(rrup + C["r3"])
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Returns the distance scaling parameter
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python
train
wal-e/wal-e
wal_e/operator/backup.py
https://github.com/wal-e/wal-e/blob/027263860e72a403bc0e1497bb3e67523138e7a2/wal_e/operator/backup.py#L248-L291
def wal_archive(self, wal_path, concurrency=1): """ Uploads a WAL file to S3 or Windows Azure Blob Service This code is intended to typically be called from Postgres's archive_command feature. """ # Upload the segment expressly indicated. It's special # relativ...
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Uploads a WAL file to S3 or Windows Azure Blob Service This code is intended to typically be called from Postgres's archive_command feature.
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python
train
inveniosoftware/invenio-pidrelations
invenio_pidrelations/serializers/schemas.py
https://github.com/inveniosoftware/invenio-pidrelations/blob/a49f3725cf595b663c5b04814280b231f88bc333/invenio_pidrelations/serializers/schemas.py#L68-L71
def dump_previous(self, obj): """Dump the parent of a PID.""" if self._is_child(obj) and obj.index(self.context['pid']) > 0: return self._dump_relative(obj.previous_child(self.context['pid']))
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Dump the parent of a PID.
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python
train
audreyr/design
design/clouds.py
https://github.com/audreyr/design/blob/3bc801dceeadfa4935a1a17f4083fbe09a03cbac/design/clouds.py#L22-L31
def draw_circle(ctx, x, y, radius, cairo_color): """ Draw a circle. :param radius: radius in pixels :param cairo_color: normalized rgb color """ ctx.new_path() ctx.set_source_rgb(cairo_color.red, cairo_color.green, cairo_color.blue) ctx.arc(x, y, radius, 0, 2 * pi) ctx.fill()
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Draw a circle. :param radius: radius in pixels :param cairo_color: normalized rgb color
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python
train
vertexproject/synapse
synapse/lib/link.py
https://github.com/vertexproject/synapse/blob/22e67c5a8f6d7caddbcf34b39ab1bd2d6c4a6e0b/synapse/lib/link.py#L49-L55
async def unixconnect(path): ''' Connect to a PF_UNIX server listening on the given path. ''' reader, writer = await asyncio.open_unix_connection(path=path) info = {'path': path, 'unix': True} return await Link.anit(reader, writer, info=info)
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Connect to a PF_UNIX server listening on the given path.
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python
train
StefanKopieczek/ticker
ticker/ticker_parsers.py
https://github.com/StefanKopieczek/ticker/blob/6dcc1bf8f55bf8612986833097531ecf021b687c/ticker/ticker_parsers.py#L19-L29
def parse_float(float_str): """Parse a string of the form 305.48b into a Python float. The terminal letter, if present, indicates e.g. billions.""" factor = __get_factor(float_str) if factor != 1: float_str = float_str[:-1] try: return float(float_str.replace(',', '')) * factor ...
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Parse a string of the form 305.48b into a Python float. The terminal letter, if present, indicates e.g. billions.
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python
train
minio/minio-py
minio/parsers.py
https://github.com/minio/minio-py/blob/7107c84183cf5fb4deff68c0a16ab9f1c0b4c37e/minio/parsers.py#L96-L111
def get_child_text(self, name, strict=True): """Extract text of a child element. If strict, and child element is not present, raises InvalidXMLError and otherwise returns None. """ if strict: try: return self.element.find('s3:{}'.format(name), _S3_NS)...
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Extract text of a child element. If strict, and child element is not present, raises InvalidXMLError and otherwise returns None.
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python
train
arteria/django-hijack
hijack/helpers.py
https://github.com/arteria/django-hijack/blob/64a3a1dd0655d9fee9786d62628add132073b946/hijack/helpers.py#L20-L35
def no_update_last_login(): """ Disconnect any signals to update_last_login() for the scope of the context manager, then restore. """ kw = {'receiver': update_last_login} kw_id = {'receiver': update_last_login, 'dispatch_uid': 'update_last_login'} was_connected = user_logged_in.disconnect(*...
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Disconnect any signals to update_last_login() for the scope of the context manager, then restore.
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python
train
coursera-dl/coursera-dl
coursera/network.py
https://github.com/coursera-dl/coursera-dl/blob/9b434bcf3c4011bf3181429fe674633ae5fb7d4d/coursera/network.py#L12-L58
def get_reply(session, url, post=False, data=None, headers=None, quiet=False): """ Download an HTML page using the requests session. Low-level function that allows for flexible request configuration. @param session: Requests session. @type session: requests.Session @param url: URL pattern with...
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Download an HTML page using the requests session. Low-level function that allows for flexible request configuration. @param session: Requests session. @type session: requests.Session @param url: URL pattern with optional keywords to format. @type url: str @param post: Flag that indicates whet...
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python
train
genialis/resolwe
resolwe/flow/utils/docs/autoprocess.py
https://github.com/genialis/resolwe/blob/f7bb54932c81ec0cfc5b5e80d238fceaeaa48d86/resolwe/flow/utils/docs/autoprocess.py#L121-L148
def make_field(self, field_name, field_body): """Fill content into nodes. :param string field_name: Field name of the field :param field_name: Field body if the field :type field_name: str or instance of docutils.nodes :return: field instance filled with given name and body ...
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Fill content into nodes. :param string field_name: Field name of the field :param field_name: Field body if the field :type field_name: str or instance of docutils.nodes :return: field instance filled with given name and body :rtype: nodes.field
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python
train
xoolive/traffic
traffic/data/adsb/opensky_impala.py
https://github.com/xoolive/traffic/blob/d1a8878098f16759f6b6e0e8d8b8f32e34a680a8/traffic/data/adsb/opensky_impala.py#L263-L399
def history( self, start: timelike, stop: Optional[timelike] = None, *args, # more reasonable to be explicit about arguments date_delta: timedelta = timedelta(hours=1), callsign: Union[None, str, Iterable[str]] = None, icao24: Union[None, str, Iterable[str]] = No...
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Get Traffic from the OpenSky Impala shell. The method builds appropriate SQL requests, caches results and formats data into a proper pandas DataFrame. Requests are split by hour (by default) in case the connection fails. Args: start: a string, epoch or datetime ...
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python
train
adaptive-learning/proso-apps
proso_models/models.py
https://github.com/adaptive-learning/proso-apps/blob/8278c72e498d6ef8d392cc47b48473f4ec037142/proso_models/models.py#L651-L694
def get_leaves(self, item_ids=None, language=None, forbidden_item_ids=None): """ Get mapping of items to their reachable leaves. Leaves having inactive relations to other items are omitted. Args: item_ids (list): items which are taken as roots for the reachability ...
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Get mapping of items to their reachable leaves. Leaves having inactive relations to other items are omitted. Args: item_ids (list): items which are taken as roots for the reachability language (str): if specified, filter out items which are not available in the g...
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python
train
wmayner/pyphi
pyphi/models/fmt.py
https://github.com/wmayner/pyphi/blob/deeca69a084d782a6fde7bf26f59e93b593c5d77/pyphi/models/fmt.py#L79-L102
def indent(lines, amount=2, char=' '): r"""Indent a string. Prepends whitespace to every line in the passed string. (Lines are separated by newline characters.) Args: lines (str): The string to indent. Keyword Args: amount (int): The number of columns to indent by. char (s...
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r"""Indent a string. Prepends whitespace to every line in the passed string. (Lines are separated by newline characters.) Args: lines (str): The string to indent. Keyword Args: amount (int): The number of columns to indent by. char (str): The character to to use as the indenta...
[ "r", "Indent", "a", "string", "." ]
python
train
decryptus/sonicprobe
sonicprobe/helpers.py
https://github.com/decryptus/sonicprobe/blob/72f73f3a40d2982d79ad68686e36aa31d94b76f8/sonicprobe/helpers.py#L357-L423
def linesubst(line, variables): """ In a string, substitute '{{varname}}' occurrences with the value of variables['varname'], '\\' being an escaping char... If at first you don't understand this function, draw its finite state machine and everything will become crystal clear :) """ # trivial...
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In a string, substitute '{{varname}}' occurrences with the value of variables['varname'], '\\' being an escaping char... If at first you don't understand this function, draw its finite state machine and everything will become crystal clear :)
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python
train
mitsei/dlkit
dlkit/json_/assessment/mixins.py
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/json_/assessment/mixins.py#L222-L232
def _update_from_database(self): """Updates map to latest state in database. Should be called prior to major object events to assure that an assessment being taken on multiple devices are reasonably synchronized. """ collection = JSONClientValidated('assessment', ...
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Updates map to latest state in database. Should be called prior to major object events to assure that an assessment being taken on multiple devices are reasonably synchronized.
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python
train
boriel/zxbasic
api/check.py
https://github.com/boriel/zxbasic/blob/23b28db10e41117805bdb3c0f78543590853b132/api/check.py#L414-L463
def common_type(a, b): """ Returns a type which is common for both a and b types. Returns None if no common types allowed. """ from symbols.type_ import SymbolBASICTYPE as BASICTYPE from symbols.type_ import Type as TYPE from symbols.type_ import SymbolTYPE if a is None or b is None: ...
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Returns a type which is common for both a and b types. Returns None if no common types allowed.
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python
train
psss/did
did/stats.py
https://github.com/psss/did/blob/04e4ee6f1aa14c0cae3ba9f9803871f3f98279cb/did/stats.py#L74-L88
def check(self): """ Check the stats if enabled. """ if not self.enabled(): return try: self.fetch() except (xmlrpclib.Fault, did.base.ConfigError) as error: log.error(error) self._error = True # Raise the exception if debugging...
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Check the stats if enabled.
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python
train
sass/libsass-python
sassutils/builder.py
https://github.com/sass/libsass-python/blob/fde5b18bc761f0253e71685ee5489e4beb8a403e/sassutils/builder.py#L201-L223
def unresolve_filename(self, package_dir, filename): """Retrieves the probable source path from the output filename. Pass in a .css path to get out a .scss path. :param package_dir: the path of the package directory :type package_dir: :class:`str` :param filename: the css filen...
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Retrieves the probable source path from the output filename. Pass in a .css path to get out a .scss path. :param package_dir: the path of the package directory :type package_dir: :class:`str` :param filename: the css filename :type filename: :class:`str` :returns: the s...
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python
train
ARMmbed/mbed-cloud-sdk-python
src/mbed_cloud/filters.py
https://github.com/ARMmbed/mbed-cloud-sdk-python/blob/c0af86fb2cdd4dc7ed26f236139241067d293509/src/mbed_cloud/filters.py#L61-L95
def _normalise_key_values(filter_obj, attr_map=None): """Converts nested dictionary filters into django-style key value pairs Map filter operators and aliases to operator-land Additionally, perform replacements according to attribute map Automatically assumes __eq if not explicitly defined """ ...
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Converts nested dictionary filters into django-style key value pairs Map filter operators and aliases to operator-land Additionally, perform replacements according to attribute map Automatically assumes __eq if not explicitly defined
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python
train
Azure/azure-event-hubs-python
azure/eventprocessorhost/partition_context.py
https://github.com/Azure/azure-event-hubs-python/blob/737c5f966557ada2cf10fa0d8f3c19671ae96348/azure/eventprocessorhost/partition_context.py#L76-L100
async def checkpoint_async_event_data(self, event_data, event_processor_context=None): """ Stores the offset and sequenceNumber from the provided received EventData instance, then writes those values to the checkpoint store via the checkpoint manager. Optionally stores the state of the E...
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Stores the offset and sequenceNumber from the provided received EventData instance, then writes those values to the checkpoint store via the checkpoint manager. Optionally stores the state of the Event Processor along the checkpoint. :param event_data: A received EventData with valid offset and...
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python
train
saltant-org/saltant-py
saltant/models/base_task_instance.py
https://github.com/saltant-org/saltant-py/blob/bf3bdbc4ec9c772c7f621f8bd6a76c5932af68be/saltant/models/base_task_instance.py#L312-L338
def wait_until_finished( self, uuid, refresh_period=DEFAULT_TASK_INSTANCE_WAIT_REFRESH_PERIOD ): """Wait until a task instance with the given UUID is finished. Args: uuid (str): The UUID of the task instance to wait for. refresh_period (float, optional): How many sec...
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Wait until a task instance with the given UUID is finished. Args: uuid (str): The UUID of the task instance to wait for. refresh_period (float, optional): How many seconds to wait in between checking the task's status. Defaults to 5 seconds. Retu...
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python
train
msmbuilder/msmbuilder
msmbuilder/msm/_metzner_mcmc_slow.py
https://github.com/msmbuilder/msmbuilder/blob/556a93a170782f47be53f4a1e9d740fb1c8272b3/msmbuilder/msm/_metzner_mcmc_slow.py#L5-L99
def metzner_mcmc_slow(Z, n_samples, n_thin=1, random_state=None): """Metropolis Markov chain Monte Carlo sampler for reversible transition matrices Parameters ---------- Z : np.array, shape=(n_states, n_states) The effective count matrix, the number of observed transitions between s...
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Metropolis Markov chain Monte Carlo sampler for reversible transition matrices Parameters ---------- Z : np.array, shape=(n_states, n_states) The effective count matrix, the number of observed transitions between states plus the number of prior counts n_samples : int Number ...
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python
train
fastai/fastai
fastai/callback.py
https://github.com/fastai/fastai/blob/9fb84a5cdefe5a766cdb792b8f5d8971737b7e67/fastai/callback.py#L36-L42
def new_with_params(self, param_groups:Collection[Collection[nn.Parameter]]): "Create a new `OptimWrapper` from `self` with another `layer_groups` but the same hyper-parameters." opt_func = getattr(self, 'opt_func', self.opt.__class__) opt = opt_func([{'params': p, 'lr':0} for p in param_groups]...
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Create a new `OptimWrapper` from `self` with another `layer_groups` but the same hyper-parameters.
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python
train
cocagne/txdbus
doc/examples/fd_server.py
https://github.com/cocagne/txdbus/blob/eb424918764b7b93eecd2a4e2e5c2d0b2944407b/doc/examples/fd_server.py#L46-L53
def dbus_lenFD(self, fd): """ Returns the byte count after reading till EOF. """ f = os.fdopen(fd, 'rb') result = len(f.read()) f.close() return result
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Returns the byte count after reading till EOF.
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python
train
Autodesk/cryptorito
cryptorito/__init__.py
https://github.com/Autodesk/cryptorito/blob/277fc7cc42c31c5bc37e26d8bf5a2ac746a6ea85/cryptorito/__init__.py#L252-L260
def has_gpg_key(fingerprint): """Checks to see if we have this gpg fingerprint""" if len(fingerprint) > 8: fingerprint = fingerprint[-8:] fingerprint = fingerprint.upper() cmd = flatten([gnupg_bin(), gnupg_home(), "--list-public-keys"]) lines = stderr_output(cmd).split('\n') return len(...
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Checks to see if we have this gpg fingerprint
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python
train
openego/ding0
ding0/core/__init__.py
https://github.com/openego/ding0/blob/e2d6528f96255e4bb22ba15514a4f1883564ed5d/ding0/core/__init__.py#L270-L325
def get_mvgd_lvla_lvgd_obj_from_id(self): """ Build dict with mapping from LVLoadAreaDing0 id to LVLoadAreaDing0 object, MVGridDistrictDing0 id to MVGridDistrictDing0 object, LVGridDistrictDing0 id to LVGridDistrictDing0 object an...
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Build dict with mapping from LVLoadAreaDing0 id to LVLoadAreaDing0 object, MVGridDistrictDing0 id to MVGridDistrictDing0 object, LVGridDistrictDing0 id to LVGridDistrictDing0 object and LVStationDi...
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python
train
DarkEnergySurvey/ugali
ugali/scratch/simulation/survey_selection_function.py
https://github.com/DarkEnergySurvey/ugali/blob/21e890b4117fc810afb6fb058e8055d564f03382/ugali/scratch/simulation/survey_selection_function.py#L117-L132
def meanFracdet(map_fracdet, lon_population, lat_population, radius_population): """ Compute the mean fracdet within circular aperture (radius specified in decimal degrees) lon, lat, and radius are taken to be arrays of the same length """ nside_fracdet = hp.npix2nside(len(map_fracdet)) map_fra...
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Compute the mean fracdet within circular aperture (radius specified in decimal degrees) lon, lat, and radius are taken to be arrays of the same length
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python
train
kerrickstaley/genanki
genanki/model.py
https://github.com/kerrickstaley/genanki/blob/624a9ffaf2f7868721cf7e7e55f53b238df9a04a/genanki/model.py#L27-L78
def _req(self): """ List of required fields for each template. Format is [tmpl_idx, "all"|"any", [req_field_1, req_field_2, ...]]. Partial reimplementation of req computing logic from Anki. We use pystache instead of Anki's custom mustache implementation. The goal is to figure out which fields are...
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python
train
zomux/deepy
deepy/dataset/padding.py
https://github.com/zomux/deepy/blob/090fbad22a08a809b12951cd0d4984f5bd432698/deepy/dataset/padding.py#L7-L17
def pad_dataset(subset, side="right", length=-1): """ Pad data set to specified length. Parameters: length - max length, a just to the max length in the batch if length is -1 """ assert length == -1 or length > 0 if type(subset[0][0][0]) in [float, int, np.int64, np.int32, np.float32]: ...
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Pad data set to specified length. Parameters: length - max length, a just to the max length in the batch if length is -1
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python
test
jopohl/urh
src/urh/controller/GeneratorTabController.py
https://github.com/jopohl/urh/blob/2eb33b125c8407964cd1092843cde5010eb88aae/src/urh/controller/GeneratorTabController.py#L499-L517
def refresh_existing_encodings(self, encodings_from_file): """ Refresh existing encodings for messages, when encoding was changed by user in dialog :return: """ update = False for msg in self.table_model.protocol.messages: i = next((i for i, d in enumerate(e...
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Refresh existing encodings for messages, when encoding was changed by user in dialog :return:
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python
train
wmayner/pyphi
pyphi/jsonify.py
https://github.com/wmayner/pyphi/blob/deeca69a084d782a6fde7bf26f59e93b593c5d77/pyphi/jsonify.py#L233-L248
def _load_model(self, dct): """Load a serialized PyPhi model. The object is memoized for reuse elsewhere in the object graph. """ classname, version, _ = _pop_metadata(dct) _check_version(version) cls = self._models[classname] # Use `from_json` if available ...
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Load a serialized PyPhi model. The object is memoized for reuse elsewhere in the object graph.
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python
train
Alignak-monitoring/alignak
alignak/dispatcher.py
https://github.com/Alignak-monitoring/alignak/blob/f3c145207e83159b799d3714e4241399c7740a64/alignak/dispatcher.py#L946-L976
def stop_request(self, stop_now=False): """Send a stop request to all the daemons :param stop_now: stop now or go to stop wait mode :type stop_now: bool :return: True if all daemons are reachable """ all_ok = True for daemon_link in self.all_daemons_links: ...
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Send a stop request to all the daemons :param stop_now: stop now or go to stop wait mode :type stop_now: bool :return: True if all daemons are reachable
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python
train