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YeoLab/anchor | anchor/infotheory.py | https://github.com/YeoLab/anchor/blob/1f9c9d6d30235b1e77b945e6ef01db5a0e55d53a/anchor/infotheory.py#L218-L266 | def cross_phenotype_jsd(data, groupby, bins, n_iter=100):
"""Jensen-Shannon divergence of features across phenotypes
Parameters
----------
data : pandas.DataFrame
A (n_samples, n_features) Dataframe
groupby : mappable
A samples to phenotypes mapping
n_iter : int
Number o... | [
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groupby : mappable
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ronniedada/tabula | tabula/section.py | https://github.com/ronniedada/tabula/blob/ba18bb2f7db75972256b950711415031dc5421c7/tabula/section.py#L216-L235 | def apply_meta(self, arr, funcs):
"""
Apply metadata to help formatting the output:
- conv_funcs: convert data before column alignments
- deco_funcs: decorate data after column alignments
"""
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ekzhu/datasketch | datasketch/b_bit_minhash.py | https://github.com/ekzhu/datasketch/blob/b3e4129987890a2beb04f2c0b6dc618ae35f2e14/datasketch/b_bit_minhash.py#L129-L136 | def _calc_a(self, r, b):
'''
Compute the function A(r, b)
'''
if r == 0.0:
# Find the limit of A(r, b) as r -> 0.
return 1.0 / (1 << b)
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sryza/spark-timeseries | python/sparkts/datetimeindex.py | https://github.com/sryza/spark-timeseries/blob/280aa887dc08ab114411245268f230fdabb76eec/python/sparkts/datetimeindex.py#L129-L153 | def uniform(start, end=None, periods=None, freq=None, sc=None):
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Instantiates a uniform DateTimeIndex.
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flatangle/flatlib | flatlib/aspects.py | https://github.com/flatangle/flatlib/blob/44e05b2991a296c678adbc17a1d51b6a21bc867c/flatlib/aspects.py#L275-L285 | def movement(self):
""" Returns the movement of this aspect.
The movement is the one of the active object, except
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mov = self.active.movement
if self.orb < 1 and mov == const.SEPARATIVE:
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widdowquinn/pyani | pyani/anib.py | https://github.com/widdowquinn/pyani/blob/2b24ec971401e04024bba896e4011984fe3f53f0/pyani/anib.py#L250-L267 | def generate_blastdb_commands(filenames, outdir, blastdb_exe=None, mode="ANIb"):
"""Return a list of makeblastdb command-lines for ANIb/ANIblastall
- filenames - a list of paths to input FASTA files
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gitpython-developers/GitPython | git/remote.py | https://github.com/gitpython-developers/GitPython/blob/1f66e25c25cde2423917ee18c4704fff83b837d1/git/remote.py#L224-L245 | def refresh(cls):
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djordon/queueing-tool | queueing_tool/network/queue_network.py | https://github.com/djordon/queueing-tool/blob/ccd418cf647ac03a54f78ba5e3725903f541b808/queueing_tool/network/queue_network.py#L987-L1012 | def next_event_description(self):
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rameshg87/pyremotevbox | pyremotevbox/ZSI/wstools/XMLSchema.py | https://github.com/rameshg87/pyremotevbox/blob/123dffff27da57c8faa3ac1dd4c68b1cf4558b1a/pyremotevbox/ZSI/wstools/XMLSchema.py#L648-L664 | def getXMLNS(self, prefix=None):
"""deference prefix or by default xmlns, returns namespace.
"""
if prefix == XMLSchemaComponent.xml:
return XMLNS.XML
parent = self
ns = self.attributes[XMLSchemaComponent.xmlns].get(prefix or\
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saltstack/salt | salt/modules/libcloud_compute.py | https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/libcloud_compute.py#L255-L282 | def list_volume_snapshots(volume_id, profile, **libcloud_kwargs):
'''
Return a list of storage volumes snapshots for this cloud
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:type volume_id: ``str``
:param profile: The profile key
:type profile: ``str``
:param libcloud_kwargs: Extra arguments... | [
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kytos/kytos-utils | kytos/cli/commands/napps/parser.py | https://github.com/kytos/kytos-utils/blob/b4750c618d15cff75970ea6124bda4d2b9a33578/kytos/cli/commands/napps/parser.py#L57-L61 | def call(subcommand, args):
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args['<napp>'] = parse_napps(args['<napp>'])
func = getattr(NAppsAPI, subcommand)
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CivicSpleen/ambry | ambry/orm/database.py | https://github.com/CivicSpleen/ambry/blob/d7f2be4bf1f7ffd086f3fadd4fcae60c32473e42/ambry/orm/database.py#L580-L589 | def delete_partitions(self, ds):
"""Fast delete of all of a datasets codes, columns, partitions and tables"""
from ambry.orm import Partition
ssq = self.session.query
ssq(Process).filter(Process.d_vid == ds.vid).delete()
ssq(Code).filter(Code.d_vid == ds.vid).delete()
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noahbenson/neuropythy | neuropythy/graphics/core.py | https://github.com/noahbenson/neuropythy/blob/b588889f6db36ddb9602ae4a72c1c0d3f41586b2/neuropythy/graphics/core.py#L259-L276 | def color_overlap(color1, *args):
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FutunnOpen/futuquant | futuquant/common/open_context_base.py | https://github.com/FutunnOpen/futuquant/blob/1512b321845f92ec9c578ce2689aa4e8482669e4/futuquant/common/open_context_base.py#L154-L190 | def _get_sync_query_processor(self, pack_func, unpack_func, is_create_socket=True):
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kpn-digital/py-timeexecution | time_execution/backends/elasticsearch.py | https://github.com/kpn-digital/py-timeexecution/blob/79b991e83f783196c41b830d0acef21ac5462596/time_execution/backends/elasticsearch.py#L110-L125 | def bulk_write(self, metrics):
"""
Write multiple metrics to elasticsearch in one request
Args:
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actions = []
index = self.get_index()
for metric in metrics:
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pmuller/versions | versions/operators.py | https://github.com/pmuller/versions/blob/951bc3fd99b6a675190f11ee0752af1d7ff5b440/versions/operators.py#L51-L64 | def parse(cls, string):
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lightning-viz/lightning-python | lightning/types/base.py | https://github.com/lightning-viz/lightning-python/blob/68563e1da82d162d204069d7586f7c695b8bd4a6/lightning/types/base.py#L181-L195 | def update(self, *args, **kwargs):
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Base method for updating data.
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data = self._clean_data(*args, **kwargs)
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benedictpaten/sonLib | bioio.py | https://github.com/benedictpaten/sonLib/blob/1decb75bb439b70721ec776f685ce98e25217d26/bioio.py#L151-L170 | def setLoggingFromOptions(options):
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"""
#We can now set up the logging info.
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setLogLevel(options.logLevel) #Use log level, unless flags are set..
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adafruit/Adafruit_Python_BluefruitLE | Adafruit_BluefruitLE/bluez_dbus/provider.py | https://github.com/adafruit/Adafruit_Python_BluefruitLE/blob/34fc6f596371b961628369d78ce836950514062f/Adafruit_BluefruitLE/bluez_dbus/provider.py#L109-L130 | def _user_thread_main(self, target):
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apple/turicreate | src/external/coremltools_wrap/coremltools/deps/protobuf/python/google/protobuf/text_format.py | https://github.com/apple/turicreate/blob/74514c3f99e25b46f22c6e02977fe3da69221c2e/src/external/coremltools_wrap/coremltools/deps/protobuf/python/google/protobuf/text_format.py#L422-L449 | def Parse(text,
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Nic30/hwt | hwt/hdl/ifContainter.py | https://github.com/Nic30/hwt/blob/8cbb399e326da3b22c233b98188a9d08dec057e6/hwt/hdl/ifContainter.py#L261-L303 | def _try_reduce(self) -> Tuple[bool, List[HdlStatement]]:
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slickqa/python-client | slickqa/connection.py | https://github.com/slickqa/python-client/blob/1d36b4977cd4140d7d24917cab2b3f82b60739c2/slickqa/connection.py#L200-L225 | def create(self):
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merll/docker-fabric | dockerfabric/tasks.py | https://github.com/merll/docker-fabric/blob/785d84e40e17265b667d8b11a6e30d8e6b2bf8d4/dockerfabric/tasks.py#L148-L156 | def list_networks(full_ids=False):
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merll/docker-map | dockermap/client/docker_util.py | https://github.com/merll/docker-map/blob/e14fe86a6ff5c33d121eb2f9157e9359cb80dd02/dockermap/client/docker_util.py#L313-L322 | def get_image_tags(self):
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chrisspen/burlap | burlap/system.py | https://github.com/chrisspen/burlap/blob/a92b0a8e5206850bb777c74af8421ea8b33779bd/burlap/system.py#L85-L103 | def distrib_release():
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Get the release number of the distribution.
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benley/butcher | butcher/targets/__init__.py | https://github.com/benley/butcher/blob/8b18828ea040af56b7835beab5fd03eab23cc9ee/butcher/targets/__init__.py#L28-L44 | def new(ruletype, **kwargs):
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LabKey/labkey-api-python | labkey/unsupported/wiki.py | https://github.com/LabKey/labkey-api-python/blob/3c8d393384d7cbb2785f8a7f5fe34007b17a76b8/labkey/unsupported/wiki.py#L31-L111 | def update_wiki(server_context, wiki_name, wiki_body, container_path=None):
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readbeyond/aeneas | aeneas/validator.py | https://github.com/readbeyond/aeneas/blob/9d95535ad63eef4a98530cfdff033b8c35315ee1/aeneas/validator.py#L493-L504 | def _check_utf8_encoding(self, bstring):
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d0c-s4vage/pfp | pfp/interp.py | https://github.com/d0c-s4vage/pfp/blob/32f2d34fdec1c70019fa83c7006d5e3be0f92fcd/pfp/interp.py#L1903-L1917 | def _handle_expr_list(self, node, scope, ctxt, stream):
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Genida/django-meerkat | src/meerkat/utils/ip_info.py | https://github.com/Genida/django-meerkat/blob/486502a75bb0800266db785fd32717d8c0eb8deb/src/meerkat/utils/ip_info.py#L100-L122 | def _get(self, ip):
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Get information about an IP.
Args:
ip (str): an IP (xxx.xxx.xxx.xxx).
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dict: see http://ipinfo.io/developers/getting-started
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daxlab/Flask-Cache-Buster | flask_cache_buster/__init__.py | https://github.com/daxlab/Flask-Cache-Buster/blob/4c10bed9ab46020904df565a9c0014a7f2e4f6b3/flask_cache_buster/__init__.py#L20-L27 | def __is_file_to_be_busted(self, filepath):
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globocom/GloboNetworkAPI-client-python | networkapiclient/ClientFactory.py | https://github.com/globocom/GloboNetworkAPI-client-python/blob/cf34f913da48d9abbf750114f5d2ac4b2dde137d/networkapiclient/ClientFactory.py#L344-L350 | def create_environment_vip(self):
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CivicSpleen/ambry | ambry/run.py | https://github.com/CivicSpleen/ambry/blob/d7f2be4bf1f7ffd086f3fadd4fcae60c32473e42/ambry/run.py#L132-L157 | def load_accounts(extra_path=None, load_user=True):
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"""
from os.path import getmtime
try:
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hhatto/autopep8 | autopep8.py | https://github.com/hhatto/autopep8/blob/fda3bb39181437b6b8a0aa0185f21ae5f14385dd/autopep8.py#L766-L776 | def fix_e262(self, result):
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joke2k/faker | faker/cli.py | https://github.com/joke2k/faker/blob/965824b61132e52d92d1a6ce470396dbbe01c96c/faker/cli.py#L267-L276 | def execute_from_command_line(argv=None):
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Microsoft/azure-devops-python-api | azure-devops/azure/devops/v5_1/git/git_client_base.py | https://github.com/Microsoft/azure-devops-python-api/blob/4777ffda2f5052fabbaddb2abe9cb434e0cf1aa8/azure-devops/azure/devops/v5_1/git/git_client_base.py#L1692-L1717 | def delete_pull_request_labels(self, repository_id, pull_request_id, label_id_or_name, project=None, project_id=None):
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Microsoft/ApplicationInsights-Python | applicationinsights/channel/contracts/DataPoint.py | https://github.com/Microsoft/ApplicationInsights-Python/blob/8452ab7126f9bb6964637d4aa1258c2af17563d6/applicationinsights/channel/contracts/DataPoint.py#L124-L133 | def count(self, value):
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closeio/redis-hashring | redis_hashring/__init__.py | https://github.com/closeio/redis-hashring/blob/d767018571fbfb5705b6115d81619b2e84b6e50e/redis_hashring/__init__.py#L235-L242 | def cleanup(self):
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Removes expired nodes/replicas from the ring.
"""
now = time.time()
expired = now - NODE_TIMEOUT
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binux/pyspider | pyspider/scheduler/scheduler.py | https://github.com/binux/pyspider/blob/3fccfabe2b057b7a56d4a4c79dc0dd6cd2239fe9/pyspider/scheduler/scheduler.py#L937-L988 | def on_task_failed(self, task):
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quantopian/zipline | zipline/__main__.py | https://github.com/quantopian/zipline/blob/77ad15e6dc4c1cbcdc133653bac8a63fc704f7fe/zipline/__main__.py#L287-L317 | def zipline_magic(line, cell=None):
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load_extensions(
default=True,
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strict=True,
environ=os.environ,
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quantopian/zipline | zipline/utils/preprocess.py | https://github.com/quantopian/zipline/blob/77ad15e6dc4c1cbcdc133653bac8a63fc704f7fe/zipline/utils/preprocess.py#L115-L139 | def call(f):
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NASA-AMMOS/AIT-Core | ait/core/tlm.py | https://github.com/NASA-AMMOS/AIT-Core/blob/9d85bd9c738e7a6a6fbdff672bea708238b02a3a/ait/core/tlm.py#L465-L470 | def _assertField(self, fieldname):
"""Raise AttributeError when Packet has no field with the given
name."""
if not self._hasattr(fieldname):
values = self._defn.name, fieldname
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gwastro/pycbc | pycbc/io/hdf.py | https://github.com/gwastro/pycbc/blob/7a64cdd104d263f1b6ea0b01e6841837d05a4cb3/pycbc/io/hdf.py#L897-L914 | def recursively_save_dict_contents_to_group(h5file, path, dic):
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Parameters
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h5file:
h5py file to be written to
path:
path within h5py file to saved dictionary
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python dictionary to be converted to hdf5 format
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iamteem/redisco | redisco/models/base.py | https://github.com/iamteem/redisco/blob/a7ba19ff3c38061d6d8bc0c10fa754baadcfeb91/redisco/models/base.py#L324-L327 | def exists(cls, id):
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acutesoftware/AIKIF | aikif/cls_file_mapping.py | https://github.com/acutesoftware/AIKIF/blob/fcf1582dc5f884b9a4fa7c6e20e9de9d94d21d03/aikif/cls_file_mapping.py#L117-L121 | def get_full_filename(self, dataType, subjectArea):
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bcbio/bcbio-nextgen | bcbio/bed/__init__.py | https://github.com/bcbio/bcbio-nextgen/blob/6a9348c0054ccd5baffd22f1bb7d0422f6978b20/bcbio/bed/__init__.py#L20-L44 | def concat(bed_files, catted=None):
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DLR-RM/RAFCON | source/rafcon/gui/mygaphas/constraint.py | https://github.com/DLR-RM/RAFCON/blob/24942ef1a904531f49ab8830a1dbb604441be498/source/rafcon/gui/mygaphas/constraint.py#L315-L328 | def get_adjusted_border_positions(self):
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Calculates the positions to limit the port movement to
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nw_x, nw_y = self._rect[0]
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jsfenfen/990-xml-reader | irs_reader/xmlrunner.py | https://github.com/jsfenfen/990-xml-reader/blob/00020529b789081329a31a2e30b5ee729ce7596a/irs_reader/xmlrunner.py#L161-L182 | def run_sked(self, object_id, sked, verbose=False):
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binux/pyspider | pyspider/fetcher/tornado_fetcher.py | https://github.com/binux/pyspider/blob/3fccfabe2b057b7a56d4a4c79dc0dd6cd2239fe9/pyspider/fetcher/tornado_fetcher.py#L792-L825 | def xmlrpc_run(self, port=24444, bind='127.0.0.1', logRequests=False):
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import umsgpack
from pyspider.libs.wsgi_xmlrpc import WSGIXMLRPCApplication
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abilian/abilian-core | abilian/web/admin/panels/dashboard.py | https://github.com/abilian/abilian-core/blob/0a71275bf108c3d51e13ca9e093c0249235351e3/abilian/web/admin/panels/dashboard.py#L148-L207 | def uniquelogins(sessions):
"""Unique logins per days/weeks/months.
:return: daily, weekly, monthly
3 lists of dictionaries of the following format [{'x':epoch, 'y': value},]
"""
# sessions = LoginSession.query.order_by(LoginSession.started_at.asc()).all()
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saltstack/salt | salt/modules/puppet.py | https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/puppet.py#L259-L296 | def status():
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.. versionadded:: 2014.7.0
Display puppet agent status
CLI Example:
.. code-block:: bash
salt '*' puppet.status
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MaxStrange/AudioSegment | audiosegment.py | https://github.com/MaxStrange/AudioSegment/blob/1daefb8de626ddff3ff7016697c3ad31d262ecd6/audiosegment.py#L691-L759 | def fft(self, start_s=None, duration_s=None, start_sample=None, num_samples=None, zero_pad=False):
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rcarmo/pngcanvas | pngcanvas.py | https://github.com/rcarmo/pngcanvas/blob/e2eaa0d5ba353005b3b658f6ee453c1956340670/pngcanvas.py#L310-L351 | def defilter(cur, prev, filter_type, bpp=4):
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if filter_type == 0: # No filter
return cur
elif filter_type == 1: # Sub
xp = 0
for xc in range(bpp, len(cur)):
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wbond/vat_moss-python | vat_moss/phone_number.py | https://github.com/wbond/vat_moss-python/blob/5089dcf036eb2e9abc58e78186fd46b522a50620/vat_moss/phone_number.py#L91-L113 | def _lookup_country_code(phone_number):
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Accepts an international form of a phone number (+ followed by digits),
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gmr/rejected | rejected/log.py | https://github.com/gmr/rejected/blob/610a3e1401122ecb98d891b6795cca0255e5b044/rejected/log.py#L104-L117 | def process(self, msg, kwargs):
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hubo1016/vlcp | vlcp/utils/flowupdater.py | https://github.com/hubo1016/vlcp/blob/239055229ec93a99cc7e15208075724ccf543bd1/vlcp/utils/flowupdater.py#L167-L248 | async def main(self):
"""
Main coroutine
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try:
lastkeys = set()
dataupdate = FlowUpdaterNotification.createMatcher(self, FlowUpdaterNotification.DATAUPDATED)
startwalk = FlowUpdaterNotification.createMatcher(self, FlowUpdaterNotification.STARTWALK)
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Atomistica/atomistica | src/python/atomistica/atomic_strain.py | https://github.com/Atomistica/atomistica/blob/5ed79d776c92b91a566be22615bfb304ecc75db7/src/python/atomistica/atomic_strain.py#L34-L47 | def get_XIJ(nat, i_now, dr_now, dr_old):
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# Do an element-wise outer product
dr_dr = dr_now.reshape(-1,3,1)*dr_old.reshape(-1,1,3)
xij = np.zeros([nat,3,3])
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GaryLee/cmdlet | cmdlet/cmds.py | https://github.com/GaryLee/cmdlet/blob/5852a63fc2c7dd723a3d7abe18455f8dacb49433/cmdlet/cmds.py#L698-L702 | def safe_substitute(prev, *args, **kw):
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etcher-be/emiz | emiz/avwx/core.py | https://github.com/etcher-be/emiz/blob/1c3e32711921d7e600e85558ffe5d337956372de/emiz/avwx/core.py#L584-L596 | def split_taf(txt: str) -> [str]: # type: ignore
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Splits a TAF report into each distinct time period
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lines = []
split = txt.split()
last_index = 0
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mbedmicro/pyOCD | pyocd/__main__.py | https://github.com/mbedmicro/pyOCD/blob/41a174718a9739f3cbe785c2ba21cb7fd1310c6f/pyocd/__main__.py#L463-L485 | def do_erase(self):
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simoninireland/epyc | epyc/experiment.py | https://github.com/simoninireland/epyc/blob/b3b61007741a0ab3de64df89070a6f30de8ec268/epyc/experiment.py#L120-L135 | def report( self, params, meta, res ):
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Kronuz/pyScss | yapps2.py | https://github.com/Kronuz/pyScss/blob/fb32b317f6e2b4b4aad2b86a74844658ac4aa11e/yapps2.py#L111-L117 | def equal_set(self, a, b):
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tensorflow/probability | experimental/mcmc/elliptical_slice_sampler.py | https://github.com/tensorflow/probability/blob/e87fe34111d68c35db0f9eeb4935f1ece9e1a8f5/experimental/mcmc/elliptical_slice_sampler.py#L228-L372 | def one_step(self, current_state, previous_kernel_results):
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volafiled/python-volapi | volapi/auxo.py | https://github.com/volafiled/python-volapi/blob/5f0bc03dbde703264ac6ed494e2050761f688a3e/volapi/auxo.py#L33-L51 | def call_async(func):
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sony/nnabla | python/src/nnabla/functions.py | https://github.com/sony/nnabla/blob/aaf3d33b7cbb38f2a03aa754178ba8f7c8481320/python/src/nnabla/functions.py#L230-L275 | def slice(ctx, x, start=None, stop=None, step=None, n_outputs=-1, outputs=None):
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earwig/mwparserfromhell | mwparserfromhell/parser/tokenizer.py | https://github.com/earwig/mwparserfromhell/blob/98dc30902d35c714a70aca8e6616f49d71cb24cc/mwparserfromhell/parser/tokenizer.py#L450-L503 | def _really_parse_external_link(self, brackets):
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if brackets:
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invalid = ("\n", " ", "]")
else:
self._parse_free_uri_scheme()
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tensorflow/datasets | tensorflow_datasets/core/registered.py | https://github.com/tensorflow/datasets/blob/46ceb0cf7b4690f38ecbbc689e4d659a903d08dc/tensorflow_datasets/core/registered.py#L343-L354 | def _cast_to_pod(val):
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bools = {"True": True, "False": False}
if val in bools:
return bools[val]
try:
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try:
return float(val)
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agile-geoscience/striplog | striplog/striplog.py | https://github.com/agile-geoscience/striplog/blob/8033b673a151f96c29802b43763e863519a3124c/striplog/striplog.py#L410-L444 | def from_petrel(cls, filename,
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points=False,
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angr/angr | angr/project.py | https://github.com/angr/angr/blob/4e2f97d56af5419ee73bdb30482c8dd8ff5f3e40/angr/project.py#L710-L717 | def is_java_jni_project(self):
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Calysto/calysto | calysto/ai/conx.py | https://github.com/Calysto/calysto/blob/20813c0f48096317aa775d03a5c6b20f12fafc93/calysto/ai/conx.py#L4700-L4709 | def copyHiddenToContext(self):
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wummel/linkchecker | linkcheck/logger/text.py | https://github.com/wummel/linkchecker/blob/c2ce810c3fb00b895a841a7be6b2e78c64e7b042/linkcheck/logger/text.py#L144-L148 | def write_url (self, url_data):
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bolt-project/bolt | bolt/local/array.py | https://github.com/bolt-project/bolt/blob/9cd7104aa085498da3097b72696184b9d3651c51/bolt/local/array.py#L66-L92 | def filter(self, func, axis=(0,)):
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dropbox/stone | stone/frontend/parser.py | https://github.com/dropbox/stone/blob/2e95cbcd1c48e05cca68c919fd8d24adec6b0f58/stone/frontend/parser.py#L567-L576 | def p_field_void(self, p):
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UCSBarchlab/PyRTL | pyrtl/rtllib/aes.py | https://github.com/UCSBarchlab/PyRTL/blob/0988e5c9c10ededd5e1f58d5306603f9edf4b3e2/pyrtl/rtllib/aes.py#L127-L149 | def decryption(self, ciphertext, key):
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Builds a single cycle AES Decryption circuit
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sixty-north/cosmic-ray | plugins/execution-engines/celery4/cosmic_ray_celery4_engine/worker.py | https://github.com/sixty-north/cosmic-ray/blob/c654e074afbb7b7fcbc23359083c1287c0d3e991/plugins/execution-engines/celery4/cosmic_ray_celery4_engine/worker.py#L25-L48 | def worker_task(work_item, config):
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This runs `cosmic-ray worker` in a subprocess and returns the results,
passing `config` to it via stdin.
Args:
work_item: A dict describing a WorkItem.
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mailgun/talon | talon/html_quotations.py | https://github.com/mailgun/talon/blob/cdd84563dd329c4f887591807870d10015e0c7a7/talon/html_quotations.py#L20-L42 | def add_checkpoint(html_note, counter):
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CodyKochmann/generators | generators/uniq.py | https://github.com/CodyKochmann/generators/blob/e4ca4dd25d5023a94b0349c69d6224070cc2526f/generators/uniq.py#L7-L16 | def uniq(pipe):
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previous = next(pipe)
yield previous
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WTRMQDev/lnoise | lnoise/noisetypes.py | https://github.com/WTRMQDev/lnoise/blob/7f8d9faf135025a6aac50131d14a34d1009e8cdd/lnoise/noisetypes.py#L69-L85 | def hkdf(self, chaining_key, input_key_material, dhlen=64):
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sanger-pathogens/circlator | circlator/merge.py | https://github.com/sanger-pathogens/circlator/blob/a4befb8c9dbbcd4b3ad1899a95aa3e689d58b638/circlator/merge.py#L210-L217 | def _has_qry_hit_longer_than(self, nucmer_hits, min_length, hits_to_exclude=None):
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6809/MC6809 | MC6809/components/mc6809_tools.py | https://github.com/6809/MC6809/blob/6ba2f5106df46689017b5d0b6d84d43b7ee6a240/MC6809/components/mc6809_tools.py#L120-L149 | def calc_new_count(min_value, value, max_value, trigger, target):
"""
change 'value' between 'min_value' and 'max_value'
so that 'trigger' will be match 'target'
>>> calc_new_count(min_value=0, value=100, max_value=200, trigger=30, target=30)
100
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SuperCowPowers/workbench | workbench/workers/pe_classifier.py | https://github.com/SuperCowPowers/workbench/blob/710232756dd717f734253315e3d0b33c9628dafb/workbench/workers/pe_classifier.py#L12-L25 | def execute(self, input_data):
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quantopian/zipline | zipline/pipeline/loaders/earnings_estimates.py | https://github.com/quantopian/zipline/blob/77ad15e6dc4c1cbcdc133653bac8a63fc704f7fe/zipline/pipeline/loaders/earnings_estimates.py#L810-L838 | def get_zeroth_quarter_idx(self, stacked_last_per_qtr):
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Filters for releases that are on or after each simulation date and
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quantumlib/Cirq | cirq/circuits/circuit.py | https://github.com/quantumlib/Cirq/blob/0827da80dd7880e5b923eb69407e980ed9bc0bd2/cirq/circuits/circuit.py#L1068-L1100 | def insert_at_frontier(self,
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kytos/python-openflow | pyof/v0x01/controller2switch/stats_reply.py | https://github.com/kytos/python-openflow/blob/4f2d0d08ab28e102ed88fe57a4ee17729f1e1bb7/pyof/v0x01/controller2switch/stats_reply.py#L35-L54 | def pack(self, value=None):
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scikit-hep/probfit | probfit/plotting.py | https://github.com/scikit-hep/probfit/blob/de3593798ea3877dd2785062bed6877dd9058a02/probfit/plotting.py#L135-L193 | def draw_residual(x, y, yerr, xerr,
show_errbars=True, ax=None,
zero_line=True, grid=True,
**kwargs):
"""Draw a residual plot on the axis.
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PythonCharmers/python-future | src/future/backports/email/header.py | https://github.com/PythonCharmers/python-future/blob/c423752879acc05eebc29b0bb9909327bd5c7308/src/future/backports/email/header.py#L157-L176 | def make_header(decoded_seq, maxlinelen=None, header_name=None,
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RI-imaging/qpsphere | qpsphere/imagefit/interp.py | https://github.com/RI-imaging/qpsphere/blob/3cfa0e9fb8e81be8c820abbeccd47242e7972ac1/qpsphere/imagefit/interp.py#L124-L167 | def get_border_phase(self, idn=0, idr=0):
"""Return one of nine border fields
Parameters
----------
idn: int
Index for refractive index.
One of -1 (left), 0 (center), 1 (right)
idr: int
Index for radius.
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pkkid/python-plexapi | plexapi/media.py | https://github.com/pkkid/python-plexapi/blob/9efbde96441c2bfbf410eacfb46e811e108e8bbc/plexapi/media.py#L191-L196 | def parse(server, data, initpath): # pragma: no cover seems to be dead code.
""" Factory method returns a new MediaPartStream from xml data. """
STREAMCLS = {1: VideoStream, 2: AudioStream, 3: SubtitleStream}
stype = cast(int, data.attrib.get('streamType'))
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waqasbhatti/astrobase | astrobase/hatsurveys/hatlc.py | https://github.com/waqasbhatti/astrobase/blob/2922a14619d183fb28005fa7d02027ac436f2265/astrobase/hatsurveys/hatlc.py#L482-L514 | def _gzip_sqlitecurve(sqlitecurve, force=False):
'''This just compresses the sqlitecurve in gzip format.
FIXME: this doesn't work with gzip < 1.6 or non-GNU gzip (probably).
'''
# -k to keep the input file just in case something explodes
if force:
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biolink/ontobio | ontobio/golr/golr_query.py | https://github.com/biolink/ontobio/blob/4e512a7831cfe6bc1b32f2c3be2ba41bc5cf7345/ontobio/golr/golr_query.py#L1629-L1639 | def map_id(self,id, prefix, closure_list):
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Map identifiers based on an equivalence closure list.
"""
prefixc = prefix + ':'
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jmcarp/nplusone | tasks.py | https://github.com/jmcarp/nplusone/blob/2f1e25d8f52c691519c528c4ed583a315bc1ccf9/tasks.py#L62-L72 | def watch_docs(ctx):
"""Run build the docs when a file changes."""
try:
import sphinx_autobuild # noqa
except ImportError:
print('ERROR: watch task requires the sphinx_autobuild package.')
print('Install it with:')
print(' pip install sphinx-autobuild')
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totalgood/nlpia | src/nlpia/talk.py | https://github.com/totalgood/nlpia/blob/efa01126275e9cd3c3a5151a644f1c798a9ec53f/src/nlpia/talk.py#L67-L80 | def transcribe(decoder, audio_file, libdir=None):
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decoder = get_decoder()
decoder.start_utt()
stream = open(audio_file, 'rb')
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OpenAgInitiative/openag_python | openag/cli/cloud/db.py | https://github.com/OpenAgInitiative/openag_python/blob/f6202340292bbf7185e1a7d4290188c0dacbb8d0/openag/cli/cloud/db.py#L52-L61 | def deinit(ctx):
"""
Detach from the current cloud server
"""
utils.check_for_cloud_server()
if config["local_server"]["url"]:
utils.cancel_global_db_replication()
if config["cloud_server"]["username"]:
ctx.invoke(logout_user)
config["cloud_server"]["url"] = None | [
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zsiciarz/pygcvs | pygcvs/helpers.py | https://github.com/zsiciarz/pygcvs/blob/ed5522ab9cf9237592a6af7a0bc8cad079afeb67/pygcvs/helpers.py#L23-L36 | def dict_to_body(star_dict):
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sods/ods | pods/datasets.py | https://github.com/sods/ods/blob/3995c659f25a0a640f6009ed7fcc2559ce659b1d/pods/datasets.py#L1271-L1304 | def olympic_sprints(data_set='rogers_girolami_data'):
"""All olympics sprint winning times for multiple output prediction."""
X = np.zeros((0, 2))
Y = np.zeros((0, 1))
cats = {}
for i, dataset in enumerate([olympic_100m_men,
olympic_100m_women,
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opencivicdata/pupa | pupa/importers/organizations.py | https://github.com/opencivicdata/pupa/blob/18e0ddc4344804987ee0f2227bf600375538dbd5/pupa/importers/organizations.py#L61-L122 | def _prepare_imports(self, dicts):
""" an override for prepare imports that sorts the imports by parent_id dependencies """
# all pseudo parent ids we've seen
pseudo_ids = set()
# pseudo matches
pseudo_matches = {}
# get prepared imports from parent
prepared = di... | [
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Alignak-monitoring/alignak | alignak/external_command.py | https://github.com/Alignak-monitoring/alignak/blob/f3c145207e83159b799d3714e4241399c7740a64/alignak/external_command.py#L2165-L2178 | def disable_host_freshness_check(self, host):
"""Disable freshness check for a host
Format of the line that triggers function call::
DISABLE_HOST_FRESHNESS_CHECK;<host_name>
:param host: host to edit
:type host: alignak.objects.host.Host
:return: None
"""
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bitesofcode/projexui | projexui/widgets/xviewwidget/xviewprofile.py | https://github.com/bitesofcode/projexui/blob/f18a73bec84df90b034ca69b9deea118dbedfc4d/projexui/widgets/xviewwidget/xviewprofile.py#L326-L358 | def toXml(self, xparent=None):
"""
Converts the data for this profile into an XML blob.
:return <xml.etree.ElementTree.Element>
"""
if xparent is not None:
xprofile = ElementTree.SubElement(xparent, 'profile')
else:
xprofile =... | [
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JdeRobot/base | src/drivers/MAVLinkServer/MAVProxy/modules/mavproxy_map/mp_tile.py | https://github.com/JdeRobot/base/blob/303b18992785b2fe802212f2d758a60873007f1f/src/drivers/MAVLinkServer/MAVProxy/modules/mavproxy_map/mp_tile.py#L140-L147 | def url(self, service):
'''return URL for a tile'''
if service not in TILE_SERVICES:
raise TileException('unknown tile service %s' % service)
url = string.Template(TILE_SERVICES[service])
(x,y) = self.tile
tile_info = TileServiceInfo(x, y, self.zoom)
return url.substitute(tile_info) | [
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markovmodel/PyEMMA | pyemma/coordinates/data/featurization/featurizer.py | https://github.com/markovmodel/PyEMMA/blob/5c3124398217de05ba5ce9c8fb01519222481ab8/pyemma/coordinates/data/featurization/featurizer.py#L850-L860 | def dimension(self):
""" current dimension due to selected features
Returns
-------
dim : int
total dimension due to all selection features
"""
dim = sum(f.dimension for f in self.active_features)
return dim | [
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Returns
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dim : int
total dimension due to all selection features | [
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