kejian/codesearchnet-python-rebalanced · Datasets at Hugging Face

text stringlengths 75 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 0.18
def parse_api_datetime(value): """ parse a datetime returned from the salesforce API. in python 3 we should just use a strptime %z, but until then we're just going to assert that its a fixed offset of +0000 since thats the observed behavior. getting python 2 to support fixed offset parsing is too compl...	[ "def", "parse_api_datetime", "(", "value", ")", ":", "dt", "=", "datetime", ".", "strptime", "(", "value", "[", "0", ":", "DATETIME_LEN", "]", ",", "API_DATE_FORMAT", ")", "offset_str", "=", "value", "[", "DATETIME_LEN", ":", "]", "assert", "offset_str", "...	55	0.008945
def get_node_sum(self, age=None): """Get sum of all branches in the tree. Returns: int: The sum of all nodes grown until the age. """ if age is None: age = self.age return age if self.comp == 1 else int((pow(self.comp, age+1) - 1) / (self.comp - 1))	[ "def", "get_node_sum", "(", "self", ",", "age", "=", "None", ")", ":", "if", "age", "is", "None", ":", "age", "=", "self", ".", "age", "return", "age", "if", "self", ".", "comp", "==", "1", "else", "int", "(", "(", "pow", "(", "self", ".", "com...	30.6	0.009524
def check_bipole(inp, name): r"""Check di-/bipole parameters. This check-function is called from one of the modelling routines in :mod:`model`. Consult these modelling routines for a detailed description of the input parameters. Parameters ---------- inp : list of floats or arrays ...	[ "def", "check_bipole", "(", "inp", ",", "name", ")", ":", "def", "chck_dipole", "(", "inp", ",", "name", ")", ":", "r\"\"\"Check inp for shape and type.\"\"\"", "# Check x", "inp", "[", "0", "]", "=", "_check_var", "(", "inp", "[", "0", "]", ",", "float", ...	31.950495	0.000301
def annotateTree(bT, fn): """ annotate a tree in an external array using the given function """ l = [None]*bT.traversalID.midEnd def fn2(bT): l[bT.traversalID.mid] = fn(bT) if bT.internal: fn2(bT.left) fn2(bT.right) fn2(bT) return l	[ "def", "annotateTree", "(", "bT", ",", "fn", ")", ":", "l", "=", "[", "None", "]", "*", "bT", ".", "traversalID", ".", "midEnd", "def", "fn2", "(", "bT", ")", ":", "l", "[", "bT", ".", "traversalID", ".", "mid", "]", "=", "fn", "(", "bT", ")"...	24.083333	0.01
def update(self, res, pk, depth=1, since=None): """ Try to sync an object to the local database, in case of failure where a referenced object is not found, attempt to fetch said object from the REST api """ fetch = lambda: self._fetcher.fetch_latest(res, pk, 1, since=sinc...	[ "def", "update", "(", "self", ",", "res", ",", "pk", ",", "depth", "=", "1", ",", "since", "=", "None", ")", ":", "fetch", "=", "lambda", ":", "self", ".", "_fetcher", ".", "fetch_latest", "(", "res", ",", "pk", ",", "1", ",", "since", "=", "si...	44.375	0.008287
def Point2HexColor(a, lfrac, tfrac): """ Return web-safe hex triplets. """ [H,S,V] = [math.floor(360 * a), lfrac, tfrac] RGB = hsvToRGB(H, S, V) H = [hex(int(math.floor(255 * x))) for x in RGB] HEX = [a[a.find('x') + 1:] for a in H] HEX = ['0' + h if len(h) == 1 else h for h in HEX]...	[ "def", "Point2HexColor", "(", "a", ",", "lfrac", ",", "tfrac", ")", ":", "[", "H", ",", "S", ",", "V", "]", "=", "[", "math", ".", "floor", "(", "360", "*", "a", ")", ",", "lfrac", ",", "tfrac", "]", "RGB", "=", "hsvToRGB", "(", "H", ",", "...	21	0.008547
def untlpydict2dcformatteddict(untl_dict, **kwargs): """Convert a UNTL data dictionary to a formatted DC data dictionary.""" ark = kwargs.get('ark', None) domain_name = kwargs.get('domain_name', None) scheme = kwargs.get('scheme', 'http') resolve_values = kwargs.get('resolve_values', None) resol...	[ "def", "untlpydict2dcformatteddict", "(", "untl_dict", ",", "", "", "kwargs", ")", ":", "ark", "=", "kwargs", ".", "get", "(", "'ark'", ",", "None", ")", "domain_name", "=", "kwargs", ".", "get", "(", "'domain_name'", ",", "None", ")", "scheme", "=", ...	37.727273	0.001175
def discover_files(base_path, sub_path='', ext='', trim_base_path=False): """Discovers all files with certain extension in given paths.""" file_list = [] for root, dirs, files in walk(path.join(base_path, sub_path)): if trim_base_path: root = path.relpath(root, base_path) file_li...	[ "def", "discover_files", "(", "base_path", ",", "sub_path", "=", "''", ",", "ext", "=", "''", ",", "trim_base_path", "=", "False", ")", ":", "file_list", "=", "[", "]", "for", "root", ",", "dirs", ",", "files", "in", "walk", "(", "path", ".", "join",...	48.1	0.002041
def set_item(filename, item): """ Save entry to JSON file """ with atomic_write(os.fsencode(str(filename))) as temp_file: with open(os.fsencode(str(filename))) as products_file: # load the JSON data into memory products_data = json.load(products_file) # check if U...	[ "def", "set_item", "(", "filename", ",", "item", ")", ":", "with", "atomic_write", "(", "os", ".", "fsencode", "(", "str", "(", "filename", ")", ")", ")", "as", "temp_file", ":", "with", "open", "(", "os", ".", "fsencode", "(", "str", "(", "filename"...	38.388889	0.001412
def parse_doc(obj: dict) -> BioCDocument: """Deserialize a dict obj to a BioCDocument object""" doc = BioCDocument() doc.id = obj['id'] doc.infons = obj['infons'] for passage in obj['passages']: doc.add_passage(parse_passage(passage)) for annotation in obj['annotations']: ...	[ "def", "parse_doc", "(", "obj", ":", "dict", ")", "->", "BioCDocument", ":", "doc", "=", "BioCDocument", "(", ")", "doc", ".", "id", "=", "obj", "[", "'id'", "]", "doc", ".", "infons", "=", "obj", "[", "'infons'", "]", "for", "passage", "in", "obj"...	38.75	0.002101
def printable_str(text, keep_newlines=False): '''Escape any control or non-ASCII characters from string. This function is intended for use with strings from an untrusted source such as writing to a console or writing to logs. It is designed to prevent things like ANSI escape sequences from showing....	[ "def", "printable_str", "(", "text", ",", "keep_newlines", "=", "False", ")", ":", "if", "isinstance", "(", "text", ",", "str", ")", ":", "new_text", "=", "ascii", "(", "text", ")", "[", "1", ":", "-", "1", "]", "else", ":", "new_text", "=", "ascii...	31.05	0.001563
def get_type_data(name): """Return dictionary representation of type. Can be used to initialize primordium.type.primitives.Type """ name = name.upper() try: return { 'authority': 'okapia.net', 'namespace': 'TextFormats', 'identifier': name, '...	[ "def", "get_type_data", "(", "name", ")", ":", "name", "=", "name", ".", "upper", "(", ")", "try", ":", "return", "{", "'authority'", ":", "'okapia.net'", ",", "'namespace'", ":", "'TextFormats'", ",", "'identifier'", ":", "name", ",", "'domain'", ":", "...	32.7	0.001486
def name(self): """The process name.""" name = self._platform_impl.get_process_name() if os.name == 'posix': # On UNIX the name gets truncated to the first 15 characters. # If it matches the first part of the cmdline we return that # one instead because it's u...	[ "def", "name", "(", "self", ")", ":", "name", "=", "self", ".", "_platform_impl", ".", "get_process_name", "(", ")", "if", "os", ".", "name", "==", "'posix'", ":", "# On UNIX the name gets truncated to the first 15 characters.", "# If it matches the first part of the cm...	41.5	0.002356
def take(self, indices, axis=0, convert=None, is_copy=True, *kwargs): """ Return the elements in the given positional* indices along an axis. This means that we are not indexing according to actual values in the index attribute of the object. We are indexing according to the a...	[ "def", "take", "(", "self", ",", "indices", ",", "axis", "=", "0", ",", "convert", "=", "None", ",", "is_copy", "=", "True", ",", "", "", "kwargs", ")", ":", "if", "convert", "is", "not", "None", ":", "msg", "=", "(", "\"The 'convert' parameter is ...	38.582418	0.000555
def to_array(self, itaper, normalization='4pi', csphase=1): """ Return the spherical harmonic coefficients of taper i as a numpy array. Usage ----- coeffs = x.to_array(itaper, [normalization, csphase]) Returns ------- coeffs : ndarray, shape (2, ...	[ "def", "to_array", "(", "self", ",", "itaper", ",", "normalization", "=", "'4pi'", ",", "csphase", "=", "1", ")", ":", "if", "type", "(", "normalization", ")", "!=", "str", ":", "raise", "ValueError", "(", "'normalization must be a string. '", "+", "'Input t...	37.804348	0.001121
def ice_refractive(file): """ Interpolator for the refractive indices of ice. Inputs: File to read the refractive index lookup table from. This is supplied as "ice_refr.dat", retrieved from http://www.atmos.washington.edu/ice_optical_constants/ Returns: A callable object th...	[ "def", "ice_refractive", "(", "file", ")", ":", "D", "=", "np", ".", "loadtxt", "(", "file", ")", "log_wl", "=", "np", ".", "log10", "(", "D", "[", ":", ",", "0", "]", "/", "1000", ")", "re", "=", "D", "[", ":", ",", "1", "]", "log_im", "="...	28.416667	0.009452
def _match_magic(self, full_path): """Return the first magic that matches this path or None.""" for magic in self.magics: if magic.matches(full_path): return magic	[ "def", "_match_magic", "(", "self", ",", "full_path", ")", ":", "for", "magic", "in", "self", ".", "magics", ":", "if", "magic", ".", "matches", "(", "full_path", ")", ":", "return", "magic" ]	40.6	0.009662
def create(cls, photo, title, description=''): """Create a new photoset. photo - primary photo """ if not isinstance(photo, Photo): raise TypeError, "Photo expected" method = 'flickr.photosets.create' data = _dopost(method, auth=True, title=title,\ ...	[ "def", "create", "(", "cls", ",", "photo", ",", "title", ",", "description", "=", "''", ")", ":", "if", "not", "isinstance", "(", "photo", ",", "Photo", ")", ":", "raise", "TypeError", ",", "\"Photo expected\"", "method", "=", "'flickr.photosets.create'", ...	34.8125	0.012238
def _any(self, memory, addr, kwargs): """ Gets any solution of an address. """ return memory.state.solver.eval(addr, exact=kwargs.pop('exact', self._exact), kwargs)	[ "def", "_any", "(", "self", ",", "memory", ",", "addr", ",", "", "", "kwargs", ")", ":", "return", "memory", ".", "state", ".", "solver", ".", "eval", "(", "addr", ",", "exact", "=", "kwargs", ".", "pop", "(", "'exact'", ",", "self", ".", "_exa...	39.2	0.015
def dim_dc(self, pars): r""" :math:`\frac{\partial \hat{\rho''}(\omega)}{\partial c} = \rho_0 \frac{-m sin(\frac{c \pi}{2}) ln(\omega \tau)(\omega \tau)^c - m (\omega \tau)^c \frac{\pi}{2} cos(\frac{\pi}{2}}{1 + 2 (\omega \tau)^c cos(\frac{c \pi}{2}) + (\omega \tau)^{2 c}} + \rho...	[ "def", "dim_dc", "(", "self", ",", "pars", ")", ":", "self", ".", "_set_parameters", "(", "pars", ")", "# term1", "nom1a", "=", "-", "self", ".", "m", "", "np", ".", "log", "(", "self", ".", "w", "", "self", ".", "tau", ")", "*", "self", ".",...	45.724138	0.001477
def load_configuration(): """Load the configuration""" (belbio_conf_fp, belbio_secrets_fp) = get_belbio_conf_files() log.info(f"Using conf: {belbio_conf_fp} and secrets files: {belbio_secrets_fp} ") config = {} if belbio_conf_fp: with open(belbio_conf_fp, "r") as f: config = ya...	[ "def", "load_configuration", "(", ")", ":", "(", "belbio_conf_fp", ",", "belbio_secrets_fp", ")", "=", "get_belbio_conf_files", "(", ")", "log", ".", "info", "(", "f\"Using conf: {belbio_conf_fp} and secrets files: {belbio_secrets_fp} \"", ")", "config", "=", "{", "}", ...	32.5	0.002299
def export_pdf(self, filename): """ Export the report in PDF format. Specify a path for which to save the file, including the trailing filename. :param str filename: path including filename :return: None """ self.make_request( raw_result=True,...	[ "def", "export_pdf", "(", "self", ",", "filename", ")", ":", "self", ".", "make_request", "(", "raw_result", "=", "True", ",", "resource", "=", "'export'", ",", "filename", "=", "filename", ",", "headers", "=", "{", "'accept'", ":", "'application/pdf'", "}...	32.615385	0.013761
def apply_grad_processors(opt, gradprocs): """ Wrapper around optimizers to apply gradient processors. Args: opt (tf.train.Optimizer): gradprocs (list[GradientProcessor]): gradient processors to add to the optimizer. Returns: a :class:`tf.train.Optimizer` instance w...	[ "def", "apply_grad_processors", "(", "opt", ",", "gradprocs", ")", ":", "assert", "isinstance", "(", "gradprocs", ",", "(", "list", ",", "tuple", ")", ")", ",", "gradprocs", "for", "gp", "in", "gradprocs", ":", "assert", "isinstance", "(", "gp", ",", "Gr...	33.545455	0.000878
def _get_broker_offsets(self, instance, topics): """ Fetch highwater offsets for each topic/partition from Kafka cluster. Do this for all partitions in the cluster because even if it has no consumers, we may want to measure whether producers are successfully producing. No need t...	[ "def", "_get_broker_offsets", "(", "self", ",", "instance", ",", "topics", ")", ":", "# Connect to Kafka", "highwater_offsets", "=", "{", "}", "topic_partitions_without_a_leader", "=", "[", "]", "topics_to_fetch", "=", "defaultdict", "(", "set", ")", "cli", "=", ...	45.982143	0.001901
def kong_61_2007(): r"""Kong 61 pt Hankel filter, as published in [Kong07]_. Taken from file ``FilterModules.f90`` provided with 1DCSEM_. License: `Apache License, Version 2.0, <http://www.apache.org/licenses/LICENSE-2.0>`_. """ dlf = DigitalFilter('Kong 61', 'kong_61_2007') dlf.base = ...	[ "def", "kong_61_2007", "(", ")", ":", "dlf", "=", "DigitalFilter", "(", "'Kong 61'", ",", "'kong_61_2007'", ")", "dlf", ".", "base", "=", "np", ".", "array", "(", "[", "2.3517745856009100e-02", ",", "2.6649097336355482e-02", ",", "3.0197383422318501e-02", ",", ...	51.77193	0.000166
def _generate_tokens(pat: GenericAny, text: str) -> Iterator[Token]: """Generate a sequence of tokens from `text` that match `pat` Parameters ---------- pat : compiled regex The pattern to use for tokenization text : str The text to tokenize """ rules = _TYPE_RULES keys...	[ "def", "_generate_tokens", "(", "pat", ":", "GenericAny", ",", "text", ":", "str", ")", "->", "Iterator", "[", "Token", "]", ":", "rules", "=", "_TYPE_RULES", "keys", "=", "_TYPE_KEYS", "groupindex", "=", "pat", ".", "groupindex", "scanner", "=", "pat", ...	28.8	0.001681
def delete_item(self, item): ''' removes an item from the db ''' for relation, dst in self.relations_of(item, True): self.delete_relation(item, relation, dst) #print(item, relation, dst) for src, relation in self.relations_to(item, True): self.delete_relation(...	[ "def", "delete_item", "(", "self", ",", "item", ")", ":", "for", "relation", ",", "dst", "in", "self", ".", "relations_of", "(", "item", ",", "True", ")", ":", "self", ".", "delete_relation", "(", "item", ",", "relation", ",", "dst", ")", "#print(item,...	41.076923	0.009158
def load_images(self, search_file, source_file): """加载待匹配图片.""" self.search_file, self.source_file = search_file, source_file self.im_search, self.im_source = imread(self.search_file), imread(self.source_file) # 初始化对象 self.check_macthing_object = CheckKeypointResult(self.im_searc...	[ "def", "load_images", "(", "self", ",", "search_file", ",", "source_file", ")", ":", "self", ".", "search_file", ",", "self", ".", "source_file", "=", "search_file", ",", "source_file", "self", ".", "im_search", ",", "self", ".", "im_source", "=", "imread", ...	55.5	0.011834
async def create_virtual_environment(loop=None): """ Create a virtual environment, and return the path to the virtual env directory, which should contain a "bin" directory with the `python` and `pip` binaries that can be used to a test install of a software package. :return: the path to the virtual...	[ "async", "def", "create_virtual_environment", "(", "loop", "=", "None", ")", ":", "tmp_dir", "=", "tempfile", ".", "mkdtemp", "(", ")", "venv_dir", "=", "os", ".", "path", ".", "join", "(", "tmp_dir", ",", "VENV_NAME", ")", "proc1", "=", "await", "asynci...	40.545455	0.001095
def read(key, root=''): ''' Read from SysFS :param key: file or path in SysFS; if key is a list then root will be prefixed on each key :return: the full (tree of) SysFS attributes under key CLI example: .. code-block:: bash salt '*' sysfs.read class/net/em1/statistics ''' i...	[ "def", "read", "(", "key", ",", "root", "=", "''", ")", ":", "if", "not", "isinstance", "(", "key", ",", "six", ".", "string_types", ")", ":", "res", "=", "{", "}", "for", "akey", "in", "key", ":", "ares", "=", "read", "(", "os", ".", "path", ...	32.349206	0.001905
def mainClassDoc(): """Function decorator used to automatic adiction of base class MEoS in subclass __doc__""" def decorator(f): # __doc__ is only writable in python3. # The doc build must be done with python3 so this snnippet do the work py_version = platform.python_version() ...	[ "def", "mainClassDoc", "(", ")", ":", "def", "decorator", "(", "f", ")", ":", "# __doc__ is only writable in python3.", "# The doc build must be done with python3 so this snnippet do the work", "py_version", "=", "platform", ".", "python_version", "(", ")", "if", "py_versio...	34.565217	0.001224
def collapsed_spectrum(fitsfile, ns1, ns2, method='mean', nwin_background=0, reverse=False, out_sp=None, debugplot=0): """Compute a collapsed spectrum from a 2D image using scans in [ns1,ns2]. Parameters ---------- fitsfile : file object File name o...	[ "def", "collapsed_spectrum", "(", "fitsfile", ",", "ns1", ",", "ns2", ",", "method", "=", "'mean'", ",", "nwin_background", "=", "0", ",", "reverse", "=", "False", ",", "out_sp", "=", "None", ",", "debugplot", "=", "0", ")", ":", "# read FITS file", "wit...	32.38961	0.000389
def print_computation_log(self, aggregate = False): """ Print the computation log of a simulation. If ``aggregate`` is ``False`` (default), print the value of each computed vector. If ``aggregate`` is ``True``, only print the minimum, maximum, and average value of each comp...	[ "def", "print_computation_log", "(", "self", ",", "aggregate", "=", "False", ")", ":", "for", "line", "in", "self", ".", "computation_log", "(", "aggregate", ")", ":", "print", "(", "line", ")" ]	44.272727	0.012072
def norm2(self): """Squared norm of the vector""" return self.x * self.x + self.y * self.y + self.z * self.z	[ "def", "norm2", "(", "self", ")", ":", "return", "self", ".", "x", "", "self", ".", "x", "+", "self", ".", "y", "", "self", ".", "y", "+", "self", ".", "z", "*", "self", ".", "z" ]	40.666667	0.016129
def define_residues_for_plotting_topology(self,cutoff): """ This function defines the residues for plotting in case only a topology file has been submitted. In this case the residence time analysis in not necessary and it is enough just to find all residues within a cutoff distance. ...	[ "def", "define_residues_for_plotting_topology", "(", "self", ",", "cutoff", ")", ":", "#self.protein_selection = self.universe.select_atoms('all and around '+str(cutoff)+' (segid '+str(self.universe.ligand.segids[0])+' and resid '+str(self.universe.ligand.resids[0])+')')", "#The previous line was ...	77.47619	0.015179
def _save_private_file(filename, json_contents): """Saves a file with read-write permissions on for the owner. Args: filename: String. Absolute path to file. json_contents: JSON serializable object to be saved. """ temp_filename = tempfile.mktemp() file_desc = os.open(temp_filename,...	[ "def", "_save_private_file", "(", "filename", ",", "json_contents", ")", ":", "temp_filename", "=", "tempfile", ".", "mktemp", "(", ")", "file_desc", "=", "os", ".", "open", "(", "temp_filename", ",", "os", ".", "O_WRONLY", "\|", "os", ".", "O_CREAT", ",", ...	42.076923	0.001789
def set_read_only(self, value): """ Sets whether model could be modified or not """ if self.__read_only__ != value: self.__read_only__ = value self._update_read_only()	[ "def", "set_read_only", "(", "self", ",", "value", ")", ":", "if", "self", ".", "__read_only__", "!=", "value", ":", "self", ".", "__read_only__", "=", "value", "self", ".", "_update_read_only", "(", ")" ]	31	0.008969
def pretty_format(obj, indent=None): """ Pretty formats the given object as a string which is returned. If indent is None, a single line will be returned. """ if indent is None: if isinstance(obj, TLObject): obj = obj.to_dict() if isinstan...	[ "def", "pretty_format", "(", "obj", ",", "indent", "=", "None", ")", ":", "if", "indent", "is", "None", ":", "if", "isinstance", "(", "obj", ",", "TLObject", ")", ":", "obj", "=", "obj", ".", "to_dict", "(", ")", "if", "isinstance", "(", "obj", ","...	35.753846	0.000838
def run(self, progress=True, verbose=False): """Compute all steps of the simulation. Be careful: if tmax is not set, this function will result in an infinit loop. Returns ------- (t, fields): last time and result fields. """ total_iter = int((self.tm...	[ "def", "run", "(", "self", ",", "progress", "=", "True", ",", "verbose", "=", "False", ")", ":", "total_iter", "=", "int", "(", "(", "self", ".", "tmax", "//", "self", ".", "user_dt", ")", "if", "self", ".", "tmax", "else", "None", ")", "log", "=...	37.535714	0.001855
def create_installer(self, rpm_py_version, kwargs): """Create Installer object.""" return DebianInstaller(rpm_py_version, self.python, self.rpm, kwargs)	[ "def", "create_installer", "(", "self", ",", "rpm_py_version", ",", "", "", "kwargs", ")", ":", "return", "DebianInstaller", "(", "rpm_py_version", ",", "self", ".", "python", ",", "self", ".", "rpm", ",", "", "", "kwargs", ")" ]	56.666667	0.011628
def basic_stats(self): """Return a markdown representation of simple statistics.""" comment_score = sum(comment.score for comment in self.comments) if self.comments: comment_duration = (self.comments[-1].created_utc - self.comments[0].created_utc) ...	[ "def", "basic_stats", "(", "self", ")", ":", "comment_score", "=", "sum", "(", "comment", ".", "score", "for", "comment", "in", "self", ".", "comments", ")", "if", "self", ".", "comments", ":", "comment_duration", "=", "(", "self", ".", "comments", "[", ...	47.592593	0.001526
def _create_kube_dns_instance(self, instance): """ Set up kube_dns instance so it can be used in OpenMetricsBaseCheck """ kube_dns_instance = deepcopy(instance) # kube_dns uses 'prometheus_endpoint' and not 'prometheus_url', so we have to rename the key kube_dns_instance...	[ "def", "_create_kube_dns_instance", "(", "self", ",", "instance", ")", ":", "kube_dns_instance", "=", "deepcopy", "(", "instance", ")", "# kube_dns uses 'prometheus_endpoint' and not 'prometheus_url', so we have to rename the key", "kube_dns_instance", "[", "'prometheus_url'", "]...	49.258065	0.008349
def select(self, crit): """ Select subset of values that match a given index criterion. Parameters ---------- crit : function, list, str, int Criterion function to map to indices, specific index value, or list of indices. """ import types ...	[ "def", "select", "(", "self", ",", "crit", ")", ":", "import", "types", "# handle lists, strings, and ints", "if", "not", "isinstance", "(", "crit", ",", "types", ".", "FunctionType", ")", ":", "# set(\"foo\") -> {\"f\", \"o\"}; wrap in list to prevent:", "if", "isins...	34.210526	0.001994
def decode_raw_stream(self, text, decode_raw, known_encoding, filename): """given string/unicode or bytes/string, determine encoding from magic encoding comment, return body as unicode or raw if decode_raw=False """ if isinstance(text, compat.text_type): m = se...	[ "def", "decode_raw_stream", "(", "self", ",", "text", ",", "decode_raw", ",", "known_encoding", ",", "filename", ")", ":", "if", "isinstance", "(", "text", ",", "compat", ".", "text_type", ")", ":", "m", "=", "self", ".", "_coding_re", ".", "match", "(",...	42.205128	0.001188
def forward_list(self): '''adb forward --list''' version = self.version() if int(version[1]) <= 1 and int(version[2]) <= 0 and int(version[3]) < 31: raise EnvironmentError("Low adb version.") lines = self.raw_cmd("forward", "--list").communicate()[0].decode("utf-8").strip().s...	[ "def", "forward_list", "(", "self", ")", ":", "version", "=", "self", ".", "version", "(", ")", "if", "int", "(", "version", "[", "1", "]", ")", "<=", "1", "and", "int", "(", "version", "[", "2", "]", ")", "<=", "0", "and", "int", "(", "version...	54.428571	0.010336
def release_branches(self): """A dictionary that maps branch names to :class:`Release` objects.""" self.ensure_release_scheme('branches') return dict((r.revision.branch, r) for r in self.releases.values())	[ "def", "release_branches", "(", "self", ")", ":", "self", ".", "ensure_release_scheme", "(", "'branches'", ")", "return", "dict", "(", "(", "r", ".", "revision", ".", "branch", ",", "r", ")", "for", "r", "in", "self", ".", "releases", ".", "values", "(...	56.5	0.008734
def full_name(self): """Return full name of member""" if self.prefix is not None: return '.'.join([self.prefix, self.member]) return self.member	[ "def", "full_name", "(", "self", ")", ":", "if", "self", ".", "prefix", "is", "not", "None", ":", "return", "'.'", ".", "join", "(", "[", "self", ".", "prefix", ",", "self", ".", "member", "]", ")", "return", "self", ".", "member" ]	35.2	0.011111
def _get_type_description(annotation): ''' Given an annotation, return the (type, description) for the parameter. If you provide an annotation that is somehow both a string and a callable, the behavior is undefined. ''' if annotation is _empty: return None, None elif callable(annotat...	[ "def", "_get_type_description", "(", "annotation", ")", ":", "if", "annotation", "is", "_empty", ":", "return", "None", ",", "None", "elif", "callable", "(", "annotation", ")", ":", "return", "annotation", ",", "None", "elif", "isinstance", "(", "annotation", ...	33.958333	0.001193
def parse_args(args): """ Parse command line parameters :param args: command line parameters as list of strings :return: command line parameters as :obj:`argparse.Namespace` """ parser = argparse.ArgumentParser( description="Just a Hello World demonstration") parser.add_argument( ...	[ "def", "parse_args", "(", "args", ")", ":", "parser", "=", "argparse", ".", "ArgumentParser", "(", "description", "=", "\"Just a Hello World demonstration\"", ")", "parser", ".", "add_argument", "(", "'-v'", ",", "'--version'", ",", "action", "=", "'version'", "...	30.2	0.002141
def getAllEncodings(self): """Returns encodings for all the records""" numEncodings=self.fields[0].numEncodings assert (all(field.numEncodings==numEncodings for field in self.fields)) encodings = [self.getEncoding(index) for index in range(numEncodings)] return encodings	[ "def", "getAllEncodings", "(", "self", ")", ":", "numEncodings", "=", "self", ".", "fields", "[", "0", "]", ".", "numEncodings", "assert", "(", "all", "(", "field", ".", "numEncodings", "==", "numEncodings", "for", "field", "in", "self", ".", "fields", "...	35.75	0.010239
def calc_2dsplinecoeffs_c(array2d): """ NAME: calc_2dsplinecoeffs_c PURPOSE: Use C to calculate spline coefficients for a 2D array INPUT: array2d OUTPUT: new array with spline coeffs HISTORY: 2013-01-24 - Written - Bovy (IAS) """ #Set up result arrays ...	[ "def", "calc_2dsplinecoeffs_c", "(", "array2d", ")", ":", "#Set up result arrays", "out", "=", "copy", ".", "copy", "(", "array2d", ")", "out", "=", "numpy", ".", "require", "(", "out", ",", "dtype", "=", "numpy", ".", "float64", ",", "requirements", "=", ...	31.107143	0.018931
def setData(self, index, value, role=QtCore.Qt.EditRole): """Reimplemented from QtCore.QAbstractItemModel You can only set the value. :param index: the index to edit, column should be 1. :type index: :class:`PySide.QtCore.QModelIndex` :param value: the new value for the configo...	[ "def", "setData", "(", "self", ",", "index", ",", "value", ",", "role", "=", "QtCore", ".", "Qt", ".", "EditRole", ")", ":", "if", "index", ".", "isValid", "(", ")", ":", "if", "role", "==", "QtCore", ".", "Qt", ".", "EditRole", ":", "if", "index...	41.258065	0.001528
def fix_sec_nseg(secs, dL): """ Set nseg of sections based on dL param: section.nseg = 1 + 2 * int(section.L / (2dL)) :param secs: netpyne dictionary with all sections :param dL: dL from config file """ for secName in secs: secs[secName]['geom']['nseg'] = 1 + 2 int(secs[secName]['geom']...	[ "def", "fix_sec_nseg", "(", "secs", ",", "dL", ")", ":", "for", "secName", "in", "secs", ":", "secs", "[", "secName", "]", "[", "'geom'", "]", "[", "'nseg'", "]", "=", "1", "+", "2", "*", "int", "(", "secs", "[", "secName", "]", "[", "'geom'", ...	41	0.01194
def generate_file_rst(fname, target_dir, src_dir, gallery_conf): """ Generate the rst file for a given example. Returns the amout of code (in characters) of the corresponding files. """ src_file = os.path.join(src_dir, fname) example_file = os.path.join(target_dir, fname) shutil.co...	[ "def", "generate_file_rst", "(", "fname", ",", "target_dir", ",", "src_dir", ",", "gallery_conf", ")", ":", "src_file", "=", "os", ".", "path", ".", "join", "(", "src_dir", ",", "fname", ")", "example_file", "=", "os", ".", "path", ".", "join", "(", "t...	40.772727	0.000272
def plot(self, series, series_diff=None, label='', color=None, style=None): ''' :param pandas.Series series: The series to be plotted, all values must be positive if stacked is True. :param pandas.Series series_diff: The series representing the diff that will ...	[ "def", "plot", "(", "self", ",", "series", ",", "series_diff", "=", "None", ",", "label", "=", "''", ",", "color", "=", "None", ",", "style", "=", "None", ")", ":", "color", "=", "self", ".", "get_color", "(", "color", ")", "if", "series_diff", "is...	44.833333	0.001456
def json_conversion(obj: Any) -> JSON: """Encode additional objects to JSON.""" try: # numpy isn't an explicit dependency of bowtie # so we can't assume it's available import numpy as np if isinstance(obj, (np.ndarray, np.generic)): return obj.tolist() except Impo...	[ "def", "json_conversion", "(", "obj", ":", "Any", ")", "->", "JSON", ":", "try", ":", "# numpy isn't an explicit dependency of bowtie", "# so we can't assume it's available", "import", "numpy", "as", "np", "if", "isinstance", "(", "obj", ",", "(", "np", ".", "ndar...	34.366667	0.001887
def get_id(self, item_type, item=None, with_id=False, hostid=None, **args): """Return id or ids of zabbix objects. :type item_type: str :param item_type: Type of zabbix object. (eg host, item etc.) :type item: str :param item: Name of zabbix object. If it is `None`, return list...	[ "def", "get_id", "(", "self", ",", "item_type", ",", "item", "=", "None", ",", "with_id", "=", "False", ",", "hostid", "=", "None", ",", "", "", "args", ")", ":", "result", "=", "None", "name", "=", "args", ".", "get", "(", "'name'", ",", "Fals...	31.644231	0.000589
def redo(self): """This is called when a new image arrives or the data in the existing image changes. """ self.clear() tab = self.channel.get_current_image() if not isinstance(tab, AstroTable): return # Generate column indices self.tab = tab....	[ "def", "redo", "(", "self", ")", ":", "self", ".", "clear", "(", ")", "tab", "=", "self", ".", "channel", ".", "get_current_image", "(", ")", "if", "not", "isinstance", "(", "tab", ",", "AstroTable", ")", ":", "return", "# Generate column indices", "self...	35.217391	0.002404
def to_dict(self, lev=0): """ Return a dictionary representation of the class :return: A dict """ _spec = self.c_param _res = {} lev += 1 for key, val in self._dict.items(): try: (_, req, _ser, _, null_allowed) = _spec[str(ke...	[ "def", "to_dict", "(", "self", ",", "lev", "=", "0", ")", ":", "_spec", "=", "self", ".", "c_param", "_res", "=", "{", "}", "lev", "+=", "1", "for", "key", ",", "val", "in", "self", ".", "_dict", ".", "items", "(", ")", ":", "try", ":", "(", ...	29.638889	0.001815
def translate_to_dbus_type(typeof, value): """ Helper function to map values from their native Python types to Dbus types. :param type typeof: Target for type conversion e.g., 'dbus.Dictionary' :param value: Value to assign using type 'typeof' :return: 'value' converted to type 'typeof' :rt...	[ "def", "translate_to_dbus_type", "(", "typeof", ",", "value", ")", ":", "if", "(", "(", "isinstance", "(", "value", ",", "types", ".", "UnicodeType", ")", "or", "isinstance", "(", "value", ",", "str", ")", ")", "and", "typeof", "is", "not", "dbus", "."...	35.529412	0.001613
def _layout(self, node): """ETE calls this function to style each node before rendering. - ETE terms: - A Style is a specification for how to render the node itself - A Face defines extra information that is rendered outside of the node - Face objects are used here to provide mo...	[ "def", "_layout", "(", "self", ",", "node", ")", ":", "def", "set_edge_style", "(", ")", ":", "\"\"\"Set the style for edges and make the node invisible.\"\"\"", "node_style", "=", "ete3", ".", "NodeStyle", "(", ")", "node_style", "[", "\"vt_line_color\"", "]", "=",...	36.461538	0.001643
def forward(self, seconds, vx=5): """ Move continuously in simulator for seconds and velocity vx. """ self.vx = vx self.sleep(seconds) self.vx = 0	[ "def", "forward", "(", "self", ",", "seconds", ",", "vx", "=", "5", ")", ":", "self", ".", "vx", "=", "vx", "self", ".", "sleep", "(", "seconds", ")", "self", ".", "vx", "=", "0" ]	26.857143	0.010309
def is_fifo(name): ''' Check if a file exists and is a FIFO. CLI Example: .. code-block:: bash salt '*' file.is_fifo /dev/fifo ''' name = os.path.expanduser(name) stat_structure = None try: stat_structure = os.stat(name) except OSError as exc: if exc.errno ...	[ "def", "is_fifo", "(", "name", ")", ":", "name", "=", "os", ".", "path", ".", "expanduser", "(", "name", ")", "stat_structure", "=", "None", "try", ":", "stat_structure", "=", "os", ".", "stat", "(", "name", ")", "except", "OSError", "as", "exc", ":"...	21.863636	0.001992
def parse_body(self, text): """Parse the function body text.""" re_raise = re.findall(r'[ \t]raise ([a-zA-Z0-9_]*)', text) if len(re_raise) > 0: self.raise_list = [x.strip() for x in re_raise] # remove duplicates from list while keeping it in the order #...	[ "def", "parse_body", "(", "self", ",", "text", ")", ":", "re_raise", "=", "re", ".", "findall", "(", "r'[ \\t]raise ([a-zA-Z0-9_]*)'", ",", "text", ")", "if", "len", "(", "re_raise", ")", ">", "0", ":", "self", ".", "raise_list", "=", "[", "x", ".", ...	39.313725	0.000973
def runGenomeSGE(bfile, freqFile, nbJob, outPrefix, options): """Runs the genome command from plink, on SGE. :param bfile: the prefix of the input file. :param freqFile: the name of the frequency file (from Plink). :param nbJob: the number of jobs to launch. :param outPrefix: the prefix of all the ...	[ "def", "runGenomeSGE", "(", "bfile", ",", "freqFile", ",", "nbJob", ",", "outPrefix", ",", "options", ")", ":", "# Add the environment variable for DRMAA package", "if", "\"DRMAA_LIBRARY_PATH\"", "not", "in", "os", ".", "environ", ":", "msg", "=", "\"could not load ...	33.819277	0.000346
def get(self, key, default=None): """Return the value at key ``key``, or default value ``default`` which is None by default. >>> dc = Dictator() >>> dc['l0'] = [1, 2, 3, 4] >>> dc.get('l0') ['1', '2', '3', '4'] >>> dc['l0'] ['1', '2', '3', '4'] >>...	[ "def", "get", "(", "self", ",", "key", ",", "default", "=", "None", ")", ":", "try", ":", "value", "=", "self", ".", "__getitem__", "(", "key", ")", "except", "KeyError", ":", "value", "=", "None", "# Py3 Redis compatibiility", "if", "isinstance", "(", ...	28.071429	0.00246
def extra_args_parser(parser=None, skip_args=None, **kwargs): """Create a parser to parse sampler-specific arguments for loading samples. Parameters ---------- parser : argparse.ArgumentParser, optional Instead of creating a parser, add arguments to the given one. If...	[ "def", "extra_args_parser", "(", "parser", "=", "None", ",", "skip_args", "=", "None", ",", "", "", "kwargs", ")", ":", "if", "parser", "is", "None", ":", "parser", "=", "argparse", ".", "ArgumentParser", "(", "", "", "kwargs", ")", "elif", "kwargs...	44.623188	0.000953
def tophat(args): """ %prog tophat folder reference Run tophat on a folder of reads. """ from jcvi.apps.bowtie import check_index from jcvi.formats.fastq import guessoffset p = OptionParser(tophat.__doc__) p.add_option("--gtf", help="Reference annotation [default: %default]") p.add...	[ "def", "tophat", "(", "args", ")", ":", "from", "jcvi", ".", "apps", ".", "bowtie", "import", "check_index", "from", "jcvi", ".", "formats", ".", "fastq", "import", "guessoffset", "p", "=", "OptionParser", "(", "tophat", ".", "__doc__", ")", "p", ".", ...	33.981818	0.00052
def main(league, time, standings, team, live, use12hour, players, output_format, output_file, upcoming, lookup, listcodes, apikey): """ A CLI for live and past football scores from various football leagues. League codes: \b - WC: World Cup - EC: European Championship - CL: Champio...	[ "def", "main", "(", "league", ",", "time", ",", "standings", ",", "team", ",", "live", ",", "use12hour", ",", "players", ",", "output_format", ",", "output_file", ",", "upcoming", ",", "lookup", ",", "listcodes", ",", "apikey", ")", ":", "headers", "=", ...	31.903226	0.001962
def rgstr_stamps_root(rgstr_stamps): """ Register stamps with the root timer (see subdivision()). Args: rgstr_stamps (list, tuple): Collection of identifiers, passed through set(), then each is passed through str(). Returns: list: Implemented registered stamp collection. ...	[ "def", "rgstr_stamps_root", "(", "rgstr_stamps", ")", ":", "rgstr_stamps", "=", "sanitize_rgstr_stamps", "(", "rgstr_stamps", ")", "f", ".", "root", ".", "rgstr_stamps", "=", "rgstr_stamps", "return", "rgstr_stamps" ]	30.714286	0.002257
def get_hdrgo2usrgos(self, hdrgos): """Return a subset of hdrgo2usrgos.""" get_usrgos = self.hdrgo2usrgos.get hdrgos_actual = self.get_hdrgos().intersection(hdrgos) return {h:get_usrgos(h) for h in hdrgos_actual}	[ "def", "get_hdrgo2usrgos", "(", "self", ",", "hdrgos", ")", ":", "get_usrgos", "=", "self", ".", "hdrgo2usrgos", ".", "get", "hdrgos_actual", "=", "self", ".", "get_hdrgos", "(", ")", ".", "intersection", "(", "hdrgos", ")", "return", "{", "h", ":", "get...	48	0.012295
def dumps(obj, args, *kwargs): """Serialize a object to string Basic Usage: >>> import simplekit.objson >>> obj = {'name':'wendy'} >>> print simplekit.objson.dumps(obj) :param obj: a object which need to dump :param args: Optional arguments that :func:`json.dumps` takes. :param kwa...	[ "def", "dumps", "(", "obj", ",", "", "args", ",", "", "", "kwargs", ")", ":", "kwargs", "[", "'default'", "]", "=", "object2dict", "return", "json", ".", "dumps", "(", "obj", ",", "", "args", ",", "", "", "kwargs", ")" ]	25.833333	0.002075
def _bind_posix_socket(socket_name=None): """ Find a socket to listen on and return it. Returns (socket_name, sock_obj) """ assert socket_name is None or isinstance(socket_name, six.text_type) s = socket.socket(socket.AF_UNIX, socket.SOCK_STREAM) if socket_name: s.bind(socket_name...	[ "def", "_bind_posix_socket", "(", "socket_name", "=", "None", ")", ":", "assert", "socket_name", "is", "None", "or", "isinstance", "(", "socket_name", ",", "six", ".", "text_type", ")", "s", "=", "socket", ".", "socket", "(", "socket", ".", "AF_UNIX", ",",...	31.241379	0.002141
def digest(instr, checksum='md5'): ''' Return a checksum digest for a string instr A string checksum : ``md5`` The hashing algorithm to use to generate checksums. Valid options: md5, sha256, sha512. CLI Example: .. code-block:: bash salt '*' hashutil.digest 'g...	[ "def", "digest", "(", "instr", ",", "checksum", "=", "'md5'", ")", ":", "hashing_funcs", "=", "{", "'md5'", ":", "__salt__", "[", "'hashutil.md5_digest'", "]", ",", "'sha256'", ":", "__salt__", "[", "'hashutil.sha256_digest'", "]", ",", "'sha512'", ":", "__s...	25.642857	0.001342
def __send_buffer(self): """ Sends the contents of self.__out_buffer to serial device :return: Number of bytes written """ bytes_written = self.serial.write(self.__out_buffer.raw) if self.DEBUG_MODE: print("Wrote: '{}'".format(binascii.hexlify(self.__out_buffe...	[ "def", "__send_buffer", "(", "self", ")", ":", "bytes_written", "=", "self", ".", "serial", ".", "write", "(", "self", ".", "__out_buffer", ".", "raw", ")", "if", "self", ".", "DEBUG_MODE", ":", "print", "(", "\"Wrote: '{}'\"", ".", "format", "(", "binas...	50	0.008183
def send_file(self, file): """ Send a file to the client, it is a convenient method to avoid duplicated code """ if self.logger: self.logger.debug("[ioc.extra.tornado.RouterHandler] send file %s" % file) self.send_file_header(file) fp = open(file, 'rb') ...	[ "def", "send_file", "(", "self", ",", "file", ")", ":", "if", "self", ".", "logger", ":", "self", ".", "logger", ".", "debug", "(", "\"[ioc.extra.tornado.RouterHandler] send file %s\"", "%", "file", ")", "self", ".", "send_file_header", "(", "file", ")", "fp...	27.153846	0.010959
def coupl_model5(self): """ Toggle switch. """ self.Coupl = -0.2self.Adj self.Coupl[2,0] = -1 self.Coupl[3,0] = -1 self.Coupl[4,1] = -1 self.Coupl[5,1] *= -1	[ "def", "coupl_model5", "(", "self", ")", ":", "self", ".", "Coupl", "=", "-", "0.2", "", "self", ".", "Adj", "self", ".", "Coupl", "[", "2", ",", "0", "]", "=", "-", "1", "self", ".", "Coupl", "[", "3", ",", "0", "]", "*=", "-", "1", "sel...	26.25	0.02765
def nn_filter(S, rec=None, aggregate=None, axis=-1, **kwargs): '''Filtering by nearest-neighbors. Each data point (e.g, spectrogram column) is replaced by aggregating its nearest neighbors in feature space. This can be useful for de-noising a spectrogram or feature matrix. The non-local means met...	[ "def", "nn_filter", "(", "S", ",", "rec", "=", "None", ",", "aggregate", "=", "None", ",", "axis", "=", "-", "1", ",", "", "", "kwargs", ")", ":", "if", "aggregate", "is", "None", ":", "aggregate", "=", "np", ".", "mean", "if", "rec", "is", "...	34.185185	0.000632
def _get_profile(self, user_account): """Retrieves a user's profile""" try: # TODO: Load active profile, not just any user_profile = objectmodels['profile'].find_one( {'owner': str(user_account.uuid)}) self.log("Profile: ", user_profile, ...	[ "def", "_get_profile", "(", "self", ",", "user_account", ")", ":", "try", ":", "# TODO: Load active profile, not just any", "user_profile", "=", "objectmodels", "[", "'profile'", "]", ".", "find_one", "(", "{", "'owner'", ":", "str", "(", "user_account", ".", "u...	33.730769	0.002217
def drawcircle(self, x, y, r = 10, colour = None, label = None): """ Draws a circle centered on (x, y) with radius r. All these are in the coordinates of your initial image ! You give these x and y in the usual ds9 pixels, (0,0) is bottom left. I will convert this into the right PIL coor...	[ "def", "drawcircle", "(", "self", ",", "x", ",", "y", ",", "r", "=", "10", ",", "colour", "=", "None", ",", "label", "=", "None", ")", ":", "self", ".", "checkforpilimage", "(", ")", "colour", "=", "self", ".", "defaultcolour", "(", "colour", ")", ...	43.727273	0.025432
def counter(self, key, dims): """Adds counter with dimensions to the registry""" return super(RegexRegistry, self).counter(self._get_key(key), dims)	[ "def", "counter", "(", "self", ",", "key", ",", "", "", "dims", ")", ":", "return", "super", "(", "RegexRegistry", ",", "self", ")", ".", "counter", "(", "self", ".", "_get_key", "(", "key", ")", ",", "", "", "dims", ")" ]	55.333333	0.011905
def _execute_helper(self): """ The actual scheduler loop. The main steps in the loop are: #. Harvest DAG parsing results through DagFileProcessorAgent #. Find and queue executable tasks #. Change task instance state in DB #. Queue tasks in executor...	[ "def", "_execute_helper", "(", "self", ")", ":", "self", ".", "executor", ".", "start", "(", ")", "self", ".", "log", ".", "info", "(", "\"Resetting orphaned tasks for active dag runs\"", ")", "self", ".", "reset_state_for_orphaned_tasks", "(", ")", "# Start after...	43.007092	0.002095
def get_word_level_vocab(self): """Provides word level vocabulary Returns ------- Vocab Word level vocabulary """ def simple_tokenize(source_str, token_delim=' ', seq_delim='\n'): return list(filter(None, re.split(token_delim + '\|' + seq_delim, s...	[ "def", "get_word_level_vocab", "(", "self", ")", ":", "def", "simple_tokenize", "(", "source_str", ",", "token_delim", "=", "' '", ",", "seq_delim", "=", "'\\n'", ")", ":", "return", "list", "(", "filter", "(", "None", ",", "re", ".", "split", "(", "toke...	30.923077	0.009662
def reset(self, label=None): """ clears all measurements, allowing the object to be reused Args: label (str, optional) : optionally change the label Example: >>> from timerit import Timerit >>> import math >>> ti = Timerit(num=10, unit='u...	[ "def", "reset", "(", "self", ",", "label", "=", "None", ")", ":", "if", "label", ":", "self", ".", "label", "=", "label", "self", ".", "times", "=", "[", "]", "self", ".", "n_loops", "=", "None", "self", ".", "total_time", "=", "None", "return", ...	33.708333	0.002404
async def status(dev: Device): """Display status information.""" power = await dev.get_power() click.echo(click.style("%s" % power, bold=power)) vol = await dev.get_volume_information() click.echo(vol.pop()) play_info = await dev.get_play_info() if not play_info.is_idle: click.echo...	[ "async", "def", "status", "(", "dev", ":", "Device", ")", ":", "power", "=", "await", "dev", ".", "get_power", "(", ")", "click", ".", "echo", "(", "click", ".", "style", "(", "\"%s\"", "%", "power", ",", "bold", "=", "power", ")", ")", "vol", "=...	28.714286	0.001605
def aggregationDivide(dividend, divisor): """ Return the result from dividing two dicts that represent date and time. Both dividend and divisor are dicts that contain one or more of the following keys: 'years', 'months', 'weeks', 'days', 'hours', 'minutes', seconds', 'milliseconds', 'microseconds'. For ex...	[ "def", "aggregationDivide", "(", "dividend", ",", "divisor", ")", ":", "# Convert each into microseconds", "dividendMonthSec", "=", "aggregationToMonthsSeconds", "(", "dividend", ")", "divisorMonthSec", "=", "aggregationToMonthsSeconds", "(", "divisor", ")", "# It is a usag...	35.702703	0.010317
def _distance_sqr_stats_naive_generic(x, y, matrix_centered, product, exponent=1): """Compute generic squared stats.""" a = matrix_centered(x, exponent=exponent) b = matrix_centered(y, exponent=exponent) covariance_xy_sqr = product(a, b) variance_x_sqr = produc...	[ "def", "_distance_sqr_stats_naive_generic", "(", "x", ",", "y", ",", "matrix_centered", ",", "product", ",", "exponent", "=", "1", ")", ":", "a", "=", "matrix_centered", "(", "x", ",", "exponent", "=", "exponent", ")", "b", "=", "matrix_centered", "(", "y"...	36.791667	0.001104
def get(session, api_key, **kwargs): """ Выполняет доступ к API. session - модуль requests или сессия из него api_key - строка ключа доступа к API rate - тариф, может быть `informers` или `forecast` lat, lon - широта и долгота ``` import yandex_weather_api import requests as req ...	[ "def", "get", "(", "session", ",", "api_key", ",", "", "", "kwargs", ")", ":", "args", ",", "kwargs", "=", "validate_args", "(", "api_key", ",", "", "", "kwargs", ")", "resp", "=", "session", ".", "get", "(", "", "args", ",", "", "*", "kwar...	27.947368	0.001821
def handleThumbDblClick( self, item ): """ Handles when a thumbnail item is double clicked on. :param item \| <QListWidgetItem> """ if ( isinstance(item, RecordListWidgetItem) ): self.emitRecordDoubleClicked(item.record())	[ "def", "handleThumbDblClick", "(", "self", ",", "item", ")", ":", "if", "(", "isinstance", "(", "item", ",", "RecordListWidgetItem", ")", ")", ":", "self", ".", "emitRecordDoubleClicked", "(", "item", ".", "record", "(", ")", ")" ]	35.875	0.02381
def parsed_stream(self, content: str, name: str=None): """Push a new Stream into the parser. All subsequent called functions will parse this new stream, until the 'popStream' function is called. """ self._streams.append(Stream(content, name))	[ "def", "parsed_stream", "(", "self", ",", "content", ":", "str", ",", "name", ":", "str", "=", "None", ")", ":", "self", ".", "_streams", ".", "append", "(", "Stream", "(", "content", ",", "name", ")", ")" ]	46.166667	0.014184
def _remove_legacy_bootstrap(): """Remove bootstrap projects from old path, they'd be really stale by now.""" home = os.environ['HOME'] old_base_dir = os.path.join(home, '.config', 'classpath_project_ensime') if os.path.isdir(old_base_dir): shutil.rmtree(old_base_dir, ignore_...	[ "def", "_remove_legacy_bootstrap", "(", ")", ":", "home", "=", "os", ".", "environ", "[", "'HOME'", "]", "old_base_dir", "=", "os", ".", "path", ".", "join", "(", "home", ",", "'.config'", ",", "'classpath_project_ensime'", ")", "if", "os", ".", "path", ...	54.5	0.012048
async def getUpdates(self, offset=None, limit=None, timeout=None, allowed_updates=None): """ See: https://core.telegram.org/bots/api#getupdates """ p = _strip(locals()) return await self._api_requ...	[ "async", "def", "getUpdates", "(", "self", ",", "offset", "=", "None", ",", "limit", "=", "None", ",", "timeout", "=", "None", ",", "allowed_updates", "=", "None", ")", ":", "p", "=", "_strip", "(", "locals", "(", ")", ")", "return", "await", "self",...	42.875	0.017143
def OpenAndRead(relative_path='debugger-blacklist.yaml'): """Attempts to find the yaml configuration file, then read it. Args: relative_path: Optional relative path override. Returns: A Config object if the open and read were successful, None if the file does not exist (which is not considered an er...	[ "def", "OpenAndRead", "(", "relative_path", "=", "'debugger-blacklist.yaml'", ")", ":", "# Note: This logic follows the convention established by source-context.json", "try", ":", "with", "open", "(", "os", ".", "path", ".", "join", "(", "sys", ".", "path", "[", "0", ...	30	0.009693
def set_code_exprs(self, codes): """Convenience: sets all the code expressions at once.""" self.code_objs = dict() self._codes = [] for code in codes: self.append_code_expr(code)	[ "def", "set_code_exprs", "(", "self", ",", "codes", ")", ":", "self", ".", "code_objs", "=", "dict", "(", ")", "self", ".", "_codes", "=", "[", "]", "for", "code", "in", "codes", ":", "self", ".", "append_code_expr", "(", "code", ")" ]	36.166667	0.009009
def rotation_matrix_from_point(point, ret_inv=False): """Compute rotation matrix to go from [0,0,1] to `point`. First, the matrix rotates to in the polar direction. Then, a rotation about the y-axis is performed to match the azimuthal angle in the x-z-plane. This rotation matrix is required for th...	[ "def", "rotation_matrix_from_point", "(", "point", ",", "ret_inv", "=", "False", ")", ":", "x", ",", "y", ",", "z", "=", "point", "# azimuthal angle", "phi", "=", "np", ".", "arctan2", "(", "x", ",", "z", ")", "# angle in polar direction (negative)", "theta"...	28.54717	0.000639
def new_tbl(cls, rows, cols, width, height, tableStyleId=None): """Return a new ``<p:tbl>`` element tree.""" # working hypothesis is this is the default table style GUID if tableStyleId is None: tableStyleId = '{5C22544A-7EE6-4342-B048-85BDC9FD1C3A}' xml = cls._tbl_tmpl() % ...	[ "def", "new_tbl", "(", "cls", ",", "rows", ",", "cols", ",", "width", ",", "height", ",", "tableStyleId", "=", "None", ")", ":", "# working hypothesis is this is the default table style GUID", "if", "tableStyleId", "is", "None", ":", "tableStyleId", "=", "'{5C2254...	35.857143	0.00194
def feed_amount(self, amount): '''Calling this function sets the form feed amount to the specified setting. Args: amount: the form feed setting you desire. Options are '1/8', '1/6', 'x/180', and 'x/60', with x being your own desired amount. X must be a minimum of 24 for 'x/1...	[ "def", "feed_amount", "(", "self", ",", "amount", ")", ":", "n", "=", "None", "if", "amount", "==", "'1/8'", ":", "amount", "=", "'0'", "elif", "amount", "==", "'1/6'", ":", "amount", "=", "'2'", "elif", "re", ".", "search", "(", "'/180'", ",", "am...	32.035714	0.008658
def sls_id(id_, mods, test=None, queue=False, *kwargs): ''' Call a single ID from the named module(s) and handle all requisites The state ID comes before* the module ID(s) on the command line. id ID to call mods Comma-delimited list of modules to search for given id and its requ...	[ "def", "sls_id", "(", "id_", ",", "mods", ",", "test", "=", "None", ",", "queue", "=", "False", ",", "", "", "kwargs", ")", ":", "conflict", "=", "_check_queue", "(", "queue", ",", "kwargs", ")", "if", "conflict", "is", "not", "None", ":", "retur...	35.863248	0.000928
def calc_b_value(magnitudes, completeness, max_mag=None, plotvar=True): """ Calculate the b-value for a range of completeness magnitudes. Calculates a power-law fit to given magnitudes for each completeness magnitude. Plots the b-values and residuals for the fitted catalogue against the completene...	[ "def", "calc_b_value", "(", "magnitudes", ",", "completeness", ",", "max_mag", "=", "None", ",", "plotvar", "=", "True", ")", ":", "b_values", "=", "[", "]", "# Calculate the cdf for all magnitudes", "counts", "=", "Counter", "(", "magnitudes", ")", "cdf", "="...	41.381443	0.000243
def need_permissions(object_getter, action, hidden=True): """Get permission for buckets or abort. :param object_getter: The function used to retrieve the object and pass it to the permission factory. :param action: The action needed. :param hidden: Determine which kind of error to return. (Defa...	[ "def", "need_permissions", "(", "object_getter", ",", "action", ",", "hidden", "=", "True", ")", ":", "def", "decorator_builder", "(", "f", ")", ":", "@", "wraps", "(", "f", ")", "def", "decorate", "(", "", "args", ",", "", "*", "kwargs", ")", ":",...	37.421053	0.001372

def parse_api_datetime(value): """ parse a datetime returned from the salesforce API. in python 3 we should just use a strptime %z, but until then we're just going to assert that its a fixed offset of +0000 since thats the observed behavior. getting python 2 to support fixed offset parsing is too compl...

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def get_node_sum(self, age=None): """Get sum of all branches in the tree. Returns: int: The sum of all nodes grown until the age. """ if age is None: age = self.age return age if self.comp == 1 else int((pow(self.comp, age+1) - 1) / (self.comp - 1))

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def check_bipole(inp, name): r"""Check di-/bipole parameters. This check-function is called from one of the modelling routines in :mod:`model`. Consult these modelling routines for a detailed description of the input parameters. Parameters ---------- inp : list of floats or arrays ...

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def annotateTree(bT, fn): """ annotate a tree in an external array using the given function """ l = [None]*bT.traversalID.midEnd def fn2(bT): l[bT.traversalID.mid] = fn(bT) if bT.internal: fn2(bT.left) fn2(bT.right) fn2(bT) return l

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def update(self, res, pk, depth=1, since=None): """ Try to sync an object to the local database, in case of failure where a referenced object is not found, attempt to fetch said object from the REST api """ fetch = lambda: self._fetcher.fetch_latest(res, pk, 1, since=sinc...

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def Point2HexColor(a, lfrac, tfrac): """ Return web-safe hex triplets. """ [H,S,V] = [math.floor(360 * a), lfrac, tfrac] RGB = hsvToRGB(H, S, V) H = [hex(int(math.floor(255 * x))) for x in RGB] HEX = [a[a.find('x') + 1:] for a in H] HEX = ['0' + h if len(h) == 1 else h for h in HEX]...

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def untlpydict2dcformatteddict(untl_dict, **kwargs): """Convert a UNTL data dictionary to a formatted DC data dictionary.""" ark = kwargs.get('ark', None) domain_name = kwargs.get('domain_name', None) scheme = kwargs.get('scheme', 'http') resolve_values = kwargs.get('resolve_values', None) resol...

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def discover_files(base_path, sub_path='', ext='', trim_base_path=False): """Discovers all files with certain extension in given paths.""" file_list = [] for root, dirs, files in walk(path.join(base_path, sub_path)): if trim_base_path: root = path.relpath(root, base_path) file_li...

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def set_item(filename, item): """ Save entry to JSON file """ with atomic_write(os.fsencode(str(filename))) as temp_file: with open(os.fsencode(str(filename))) as products_file: # load the JSON data into memory products_data = json.load(products_file) # check if U...

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def parse_doc(obj: dict) -> BioCDocument: """Deserialize a dict obj to a BioCDocument object""" doc = BioCDocument() doc.id = obj['id'] doc.infons = obj['infons'] for passage in obj['passages']: doc.add_passage(parse_passage(passage)) for annotation in obj['annotations']: ...

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def printable_str(text, keep_newlines=False): '''Escape any control or non-ASCII characters from string. This function is intended for use with strings from an untrusted source such as writing to a console or writing to logs. It is designed to prevent things like ANSI escape sequences from showing....

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def get_type_data(name): """Return dictionary representation of type. Can be used to initialize primordium.type.primitives.Type """ name = name.upper() try: return { 'authority': 'okapia.net', 'namespace': 'TextFormats', 'identifier': name, '...

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def name(self): """The process name.""" name = self._platform_impl.get_process_name() if os.name == 'posix': # On UNIX the name gets truncated to the first 15 characters. # If it matches the first part of the cmdline we return that # one instead because it's u...

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def take(self, indices, axis=0, convert=None, is_copy=True, **kwargs): """ Return the elements in the given *positional* indices along an axis. This means that we are not indexing according to actual values in the index attribute of the object. We are indexing according to the a...

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def to_array(self, itaper, normalization='4pi', csphase=1): """ Return the spherical harmonic coefficients of taper i as a numpy array. Usage ----- coeffs = x.to_array(itaper, [normalization, csphase]) Returns ------- coeffs : ndarray, shape (2, ...

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def ice_refractive(file): """ Interpolator for the refractive indices of ice. Inputs: File to read the refractive index lookup table from. This is supplied as "ice_refr.dat", retrieved from http://www.atmos.washington.edu/ice_optical_constants/ Returns: A callable object th...

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def _match_magic(self, full_path): """Return the first magic that matches this path or None.""" for magic in self.magics: if magic.matches(full_path): return magic

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def create(cls, photo, title, description=''): """Create a new photoset. photo - primary photo """ if not isinstance(photo, Photo): raise TypeError, "Photo expected" method = 'flickr.photosets.create' data = _dopost(method, auth=True, title=title,\ ...

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def _any(self, memory, addr, **kwargs): """ Gets any solution of an address. """ return memory.state.solver.eval(addr, exact=kwargs.pop('exact', self._exact), **kwargs)

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def dim_dc(self, pars): r""" :math:`\frac{\partial \hat{\rho''}(\omega)}{\partial c} = \rho_0 \frac{-m sin(\frac{c \pi}{2}) ln(\omega \tau)(\omega \tau)^c - m (\omega \tau)^c \frac{\pi}{2} cos(\frac{\pi}{2}}{1 + 2 (\omega \tau)^c cos(\frac{c \pi}{2}) + (\omega \tau)^{2 c}} + \rho...

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def load_configuration(): """Load the configuration""" (belbio_conf_fp, belbio_secrets_fp) = get_belbio_conf_files() log.info(f"Using conf: {belbio_conf_fp} and secrets files: {belbio_secrets_fp} ") config = {} if belbio_conf_fp: with open(belbio_conf_fp, "r") as f: config = ya...

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def export_pdf(self, filename): """ Export the report in PDF format. Specify a path for which to save the file, including the trailing filename. :param str filename: path including filename :return: None """ self.make_request( raw_result=True,...

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def apply_grad_processors(opt, gradprocs): """ Wrapper around optimizers to apply gradient processors. Args: opt (tf.train.Optimizer): gradprocs (list[GradientProcessor]): gradient processors to add to the optimizer. Returns: a :class:`tf.train.Optimizer` instance w...

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def _get_broker_offsets(self, instance, topics): """ Fetch highwater offsets for each topic/partition from Kafka cluster. Do this for all partitions in the cluster because even if it has no consumers, we may want to measure whether producers are successfully producing. No need t...

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def kong_61_2007(): r"""Kong 61 pt Hankel filter, as published in [Kong07]_. Taken from file ``FilterModules.f90`` provided with 1DCSEM_. License: `Apache License, Version 2.0, <http://www.apache.org/licenses/LICENSE-2.0>`_. """ dlf = DigitalFilter('Kong 61', 'kong_61_2007') dlf.base = ...

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def _generate_tokens(pat: GenericAny, text: str) -> Iterator[Token]: """Generate a sequence of tokens from `text` that match `pat` Parameters ---------- pat : compiled regex The pattern to use for tokenization text : str The text to tokenize """ rules = _TYPE_RULES keys...

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def delete_item(self, item): ''' removes an item from the db ''' for relation, dst in self.relations_of(item, True): self.delete_relation(item, relation, dst) #print(item, relation, dst) for src, relation in self.relations_to(item, True): self.delete_relation(...

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def load_images(self, search_file, source_file): """加载待匹配图片.""" self.search_file, self.source_file = search_file, source_file self.im_search, self.im_source = imread(self.search_file), imread(self.source_file) # 初始化对象 self.check_macthing_object = CheckKeypointResult(self.im_searc...

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async def create_virtual_environment(loop=None): """ Create a virtual environment, and return the path to the virtual env directory, which should contain a "bin" directory with the `python` and `pip` binaries that can be used to a test install of a software package. :return: the path to the virtual...

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def read(key, root=''): ''' Read from SysFS :param key: file or path in SysFS; if key is a list then root will be prefixed on each key :return: the full (tree of) SysFS attributes under key CLI example: .. code-block:: bash salt '*' sysfs.read class/net/em1/statistics ''' i...

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def mainClassDoc(): """Function decorator used to automatic adiction of base class MEoS in subclass __doc__""" def decorator(f): # __doc__ is only writable in python3. # The doc build must be done with python3 so this snnippet do the work py_version = platform.python_version() ...

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def collapsed_spectrum(fitsfile, ns1, ns2, method='mean', nwin_background=0, reverse=False, out_sp=None, debugplot=0): """Compute a collapsed spectrum from a 2D image using scans in [ns1,ns2]. Parameters ---------- fitsfile : file object File name o...

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def print_computation_log(self, aggregate = False): """ Print the computation log of a simulation. If ``aggregate`` is ``False`` (default), print the value of each computed vector. If ``aggregate`` is ``True``, only print the minimum, maximum, and average value of each comp...

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def norm2(self): """Squared norm of the vector""" return self.x * self.x + self.y * self.y + self.z * self.z

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def define_residues_for_plotting_topology(self,cutoff): """ This function defines the residues for plotting in case only a topology file has been submitted. In this case the residence time analysis in not necessary and it is enough just to find all residues within a cutoff distance. ...

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def _save_private_file(filename, json_contents): """Saves a file with read-write permissions on for the owner. Args: filename: String. Absolute path to file. json_contents: JSON serializable object to be saved. """ temp_filename = tempfile.mktemp() file_desc = os.open(temp_filename,...

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def set_read_only(self, value): """ Sets whether model could be modified or not """ if self.__read_only__ != value: self.__read_only__ = value self._update_read_only()

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def pretty_format(obj, indent=None): """ Pretty formats the given object as a string which is returned. If indent is None, a single line will be returned. """ if indent is None: if isinstance(obj, TLObject): obj = obj.to_dict() if isinstan...

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def run(self, progress=True, verbose=False): """Compute all steps of the simulation. Be careful: if tmax is not set, this function will result in an infinit loop. Returns ------- (t, fields): last time and result fields. """ total_iter = int((self.tm...

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def create_installer(self, rpm_py_version, **kwargs): """Create Installer object.""" return DebianInstaller(rpm_py_version, self.python, self.rpm, **kwargs)

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def basic_stats(self): """Return a markdown representation of simple statistics.""" comment_score = sum(comment.score for comment in self.comments) if self.comments: comment_duration = (self.comments[-1].created_utc - self.comments[0].created_utc) ...

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def _create_kube_dns_instance(self, instance): """ Set up kube_dns instance so it can be used in OpenMetricsBaseCheck """ kube_dns_instance = deepcopy(instance) # kube_dns uses 'prometheus_endpoint' and not 'prometheus_url', so we have to rename the key kube_dns_instance...

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def select(self, crit): """ Select subset of values that match a given index criterion. Parameters ---------- crit : function, list, str, int Criterion function to map to indices, specific index value, or list of indices. """ import types ...

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def decode_raw_stream(self, text, decode_raw, known_encoding, filename): """given string/unicode or bytes/string, determine encoding from magic encoding comment, return body as unicode or raw if decode_raw=False """ if isinstance(text, compat.text_type): m = se...

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def forward_list(self): '''adb forward --list''' version = self.version() if int(version[1]) <= 1 and int(version[2]) <= 0 and int(version[3]) < 31: raise EnvironmentError("Low adb version.") lines = self.raw_cmd("forward", "--list").communicate()[0].decode("utf-8").strip().s...

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def release_branches(self): """A dictionary that maps branch names to :class:`Release` objects.""" self.ensure_release_scheme('branches') return dict((r.revision.branch, r) for r in self.releases.values())

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def full_name(self): """Return full name of member""" if self.prefix is not None: return '.'.join([self.prefix, self.member]) return self.member

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def _get_type_description(annotation): ''' Given an annotation, return the (type, description) for the parameter. If you provide an annotation that is somehow both a string and a callable, the behavior is undefined. ''' if annotation is _empty: return None, None elif callable(annotat...

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def parse_args(args): """ Parse command line parameters :param args: command line parameters as list of strings :return: command line parameters as :obj:`argparse.Namespace` """ parser = argparse.ArgumentParser( description="Just a Hello World demonstration") parser.add_argument( ...

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def getAllEncodings(self): """Returns encodings for all the records""" numEncodings=self.fields[0].numEncodings assert (all(field.numEncodings==numEncodings for field in self.fields)) encodings = [self.getEncoding(index) for index in range(numEncodings)] return encodings

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def calc_2dsplinecoeffs_c(array2d): """ NAME: calc_2dsplinecoeffs_c PURPOSE: Use C to calculate spline coefficients for a 2D array INPUT: array2d OUTPUT: new array with spline coeffs HISTORY: 2013-01-24 - Written - Bovy (IAS) """ #Set up result arrays ...

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def setData(self, index, value, role=QtCore.Qt.EditRole): """Reimplemented from QtCore.QAbstractItemModel You can only set the value. :param index: the index to edit, column should be 1. :type index: :class:`PySide.QtCore.QModelIndex` :param value: the new value for the configo...

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def fix_sec_nseg(secs, dL): """ Set nseg of sections based on dL param: section.nseg = 1 + 2 * int(section.L / (2*dL)) :param secs: netpyne dictionary with all sections :param dL: dL from config file """ for secName in secs: secs[secName]['geom']['nseg'] = 1 + 2 * int(secs[secName]['geom']...

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def generate_file_rst(fname, target_dir, src_dir, gallery_conf): """ Generate the rst file for a given example. Returns the amout of code (in characters) of the corresponding files. """ src_file = os.path.join(src_dir, fname) example_file = os.path.join(target_dir, fname) shutil.co...

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def plot(self, series, series_diff=None, label='', color=None, style=None): ''' :param pandas.Series series: The series to be plotted, all values must be positive if stacked is True. :param pandas.Series series_diff: The series representing the diff that will ...

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def json_conversion(obj: Any) -> JSON: """Encode additional objects to JSON.""" try: # numpy isn't an explicit dependency of bowtie # so we can't assume it's available import numpy as np if isinstance(obj, (np.ndarray, np.generic)): return obj.tolist() except Impo...

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def get_id(self, item_type, item=None, with_id=False, hostid=None, **args): """Return id or ids of zabbix objects. :type item_type: str :param item_type: Type of zabbix object. (eg host, item etc.) :type item: str :param item: Name of zabbix object. If it is `None`, return list...

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def redo(self): """This is called when a new image arrives or the data in the existing image changes. """ self.clear() tab = self.channel.get_current_image() if not isinstance(tab, AstroTable): return # Generate column indices self.tab = tab....

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def to_dict(self, lev=0): """ Return a dictionary representation of the class :return: A dict """ _spec = self.c_param _res = {} lev += 1 for key, val in self._dict.items(): try: (_, req, _ser, _, null_allowed) = _spec[str(ke...

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def translate_to_dbus_type(typeof, value): """ Helper function to map values from their native Python types to Dbus types. :param type typeof: Target for type conversion e.g., 'dbus.Dictionary' :param value: Value to assign using type 'typeof' :return: 'value' converted to type 'typeof' :rt...

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def _layout(self, node): """ETE calls this function to style each node before rendering. - ETE terms: - A Style is a specification for how to render the node itself - A Face defines extra information that is rendered outside of the node - Face objects are used here to provide mo...

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def forward(self, seconds, vx=5): """ Move continuously in simulator for seconds and velocity vx. """ self.vx = vx self.sleep(seconds) self.vx = 0

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def is_fifo(name): ''' Check if a file exists and is a FIFO. CLI Example: .. code-block:: bash salt '*' file.is_fifo /dev/fifo ''' name = os.path.expanduser(name) stat_structure = None try: stat_structure = os.stat(name) except OSError as exc: if exc.errno ...

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def parse_body(self, text): """Parse the function body text.""" re_raise = re.findall(r'[ \t]raise ([a-zA-Z0-9_]*)', text) if len(re_raise) > 0: self.raise_list = [x.strip() for x in re_raise] # remove duplicates from list while keeping it in the order #...

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def runGenomeSGE(bfile, freqFile, nbJob, outPrefix, options): """Runs the genome command from plink, on SGE. :param bfile: the prefix of the input file. :param freqFile: the name of the frequency file (from Plink). :param nbJob: the number of jobs to launch. :param outPrefix: the prefix of all the ...

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def get(self, key, default=None): """Return the value at key ``key``, or default value ``default`` which is None by default. >>> dc = Dictator() >>> dc['l0'] = [1, 2, 3, 4] >>> dc.get('l0') ['1', '2', '3', '4'] >>> dc['l0'] ['1', '2', '3', '4'] >>...

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def extra_args_parser(parser=None, skip_args=None, **kwargs): """Create a parser to parse sampler-specific arguments for loading samples. Parameters ---------- parser : argparse.ArgumentParser, optional Instead of creating a parser, add arguments to the given one. If...

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def tophat(args): """ %prog tophat folder reference Run tophat on a folder of reads. """ from jcvi.apps.bowtie import check_index from jcvi.formats.fastq import guessoffset p = OptionParser(tophat.__doc__) p.add_option("--gtf", help="Reference annotation [default: %default]") p.add...

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def main(league, time, standings, team, live, use12hour, players, output_format, output_file, upcoming, lookup, listcodes, apikey): """ A CLI for live and past football scores from various football leagues. League codes: \b - WC: World Cup - EC: European Championship - CL: Champio...

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def rgstr_stamps_root(rgstr_stamps): """ Register stamps with the root timer (see subdivision()). Args: rgstr_stamps (list, tuple): Collection of identifiers, passed through set(), then each is passed through str(). Returns: list: Implemented registered stamp collection. ...

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def get_hdrgo2usrgos(self, hdrgos): """Return a subset of hdrgo2usrgos.""" get_usrgos = self.hdrgo2usrgos.get hdrgos_actual = self.get_hdrgos().intersection(hdrgos) return {h:get_usrgos(h) for h in hdrgos_actual}

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def dumps(obj, *args, **kwargs): """Serialize a object to string Basic Usage: >>> import simplekit.objson >>> obj = {'name':'wendy'} >>> print simplekit.objson.dumps(obj) :param obj: a object which need to dump :param args: Optional arguments that :func:`json.dumps` takes. :param kwa...

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def _bind_posix_socket(socket_name=None): """ Find a socket to listen on and return it. Returns (socket_name, sock_obj) """ assert socket_name is None or isinstance(socket_name, six.text_type) s = socket.socket(socket.AF_UNIX, socket.SOCK_STREAM) if socket_name: s.bind(socket_name...

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def digest(instr, checksum='md5'): ''' Return a checksum digest for a string instr A string checksum : ``md5`` The hashing algorithm to use to generate checksums. Valid options: md5, sha256, sha512. CLI Example: .. code-block:: bash salt '*' hashutil.digest 'g...

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def __send_buffer(self): """ Sends the contents of self.__out_buffer to serial device :return: Number of bytes written """ bytes_written = self.serial.write(self.__out_buffer.raw) if self.DEBUG_MODE: print("Wrote: '{}'".format(binascii.hexlify(self.__out_buffe...

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def send_file(self, file): """ Send a file to the client, it is a convenient method to avoid duplicated code """ if self.logger: self.logger.debug("[ioc.extra.tornado.RouterHandler] send file %s" % file) self.send_file_header(file) fp = open(file, 'rb') ...

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def coupl_model5(self): """ Toggle switch. """ self.Coupl = -0.2*self.Adj self.Coupl[2,0] *= -1 self.Coupl[3,0] *= -1 self.Coupl[4,1] *= -1 self.Coupl[5,1] *= -1

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def nn_filter(S, rec=None, aggregate=None, axis=-1, **kwargs): '''Filtering by nearest-neighbors. Each data point (e.g, spectrogram column) is replaced by aggregating its nearest neighbors in feature space. This can be useful for de-noising a spectrogram or feature matrix. The non-local means met...

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def _get_profile(self, user_account): """Retrieves a user's profile""" try: # TODO: Load active profile, not just any user_profile = objectmodels['profile'].find_one( {'owner': str(user_account.uuid)}) self.log("Profile: ", user_profile, ...

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def drawcircle(self, x, y, r = 10, colour = None, label = None): """ Draws a circle centered on (x, y) with radius r. All these are in the coordinates of your initial image ! You give these x and y in the usual ds9 pixels, (0,0) is bottom left. I will convert this into the right PIL coor...

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def counter(self, key, **dims): """Adds counter with dimensions to the registry""" return super(RegexRegistry, self).counter(self._get_key(key), **dims)

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def _execute_helper(self): """ The actual scheduler loop. The main steps in the loop are: #. Harvest DAG parsing results through DagFileProcessorAgent #. Find and queue executable tasks #. Change task instance state in DB #. Queue tasks in executor...

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def get_word_level_vocab(self): """Provides word level vocabulary Returns ------- Vocab Word level vocabulary """ def simple_tokenize(source_str, token_delim=' ', seq_delim='\n'): return list(filter(None, re.split(token_delim + '|' + seq_delim, s...

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def reset(self, label=None): """ clears all measurements, allowing the object to be reused Args: label (str, optional) : optionally change the label Example: >>> from timerit import Timerit >>> import math >>> ti = Timerit(num=10, unit='u...

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async def status(dev: Device): """Display status information.""" power = await dev.get_power() click.echo(click.style("%s" % power, bold=power)) vol = await dev.get_volume_information() click.echo(vol.pop()) play_info = await dev.get_play_info() if not play_info.is_idle: click.echo...

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def aggregationDivide(dividend, divisor): """ Return the result from dividing two dicts that represent date and time. Both dividend and divisor are dicts that contain one or more of the following keys: 'years', 'months', 'weeks', 'days', 'hours', 'minutes', seconds', 'milliseconds', 'microseconds'. For ex...

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def _distance_sqr_stats_naive_generic(x, y, matrix_centered, product, exponent=1): """Compute generic squared stats.""" a = matrix_centered(x, exponent=exponent) b = matrix_centered(y, exponent=exponent) covariance_xy_sqr = product(a, b) variance_x_sqr = produc...

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def get(session, api_key, **kwargs): """ Выполняет доступ к API. session - модуль requests или сессия из него api_key - строка ключа доступа к API rate - тариф, может быть `informers` или `forecast` lat, lon - широта и долгота ``` import yandex_weather_api import requests as req ...

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def handleThumbDblClick( self, item ): """ Handles when a thumbnail item is double clicked on. :param item | <QListWidgetItem> """ if ( isinstance(item, RecordListWidgetItem) ): self.emitRecordDoubleClicked(item.record())

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def parsed_stream(self, content: str, name: str=None): """Push a new Stream into the parser. All subsequent called functions will parse this new stream, until the 'popStream' function is called. """ self._streams.append(Stream(content, name))

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def _remove_legacy_bootstrap(): """Remove bootstrap projects from old path, they'd be really stale by now.""" home = os.environ['HOME'] old_base_dir = os.path.join(home, '.config', 'classpath_project_ensime') if os.path.isdir(old_base_dir): shutil.rmtree(old_base_dir, ignore_...

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async def getUpdates(self, offset=None, limit=None, timeout=None, allowed_updates=None): """ See: https://core.telegram.org/bots/api#getupdates """ p = _strip(locals()) return await self._api_requ...

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def OpenAndRead(relative_path='debugger-blacklist.yaml'): """Attempts to find the yaml configuration file, then read it. Args: relative_path: Optional relative path override. Returns: A Config object if the open and read were successful, None if the file does not exist (which is not considered an er...

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def set_code_exprs(self, codes): """Convenience: sets all the code expressions at once.""" self.code_objs = dict() self._codes = [] for code in codes: self.append_code_expr(code)

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def rotation_matrix_from_point(point, ret_inv=False): """Compute rotation matrix to go from [0,0,1] to `point`. First, the matrix rotates to in the polar direction. Then, a rotation about the y-axis is performed to match the azimuthal angle in the x-z-plane. This rotation matrix is required for th...

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def new_tbl(cls, rows, cols, width, height, tableStyleId=None): """Return a new ``<p:tbl>`` element tree.""" # working hypothesis is this is the default table style GUID if tableStyleId is None: tableStyleId = '{5C22544A-7EE6-4342-B048-85BDC9FD1C3A}' xml = cls._tbl_tmpl() % ...

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def feed_amount(self, amount): '''Calling this function sets the form feed amount to the specified setting. Args: amount: the form feed setting you desire. Options are '1/8', '1/6', 'x/180', and 'x/60', with x being your own desired amount. X must be a minimum of 24 for 'x/1...

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def sls_id(id_, mods, test=None, queue=False, **kwargs): ''' Call a single ID from the named module(s) and handle all requisites The state ID comes *before* the module ID(s) on the command line. id ID to call mods Comma-delimited list of modules to search for given id and its requ...

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def calc_b_value(magnitudes, completeness, max_mag=None, plotvar=True): """ Calculate the b-value for a range of completeness magnitudes. Calculates a power-law fit to given magnitudes for each completeness magnitude. Plots the b-values and residuals for the fitted catalogue against the completene...

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def need_permissions(object_getter, action, hidden=True): """Get permission for buckets or abort. :param object_getter: The function used to retrieve the object and pass it to the permission factory. :param action: The action needed. :param hidden: Determine which kind of error to return. (Defa...

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