kejian/codesearchnet-python-rebalanced · Datasets at Hugging Face

text stringlengths 75 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 0.18
def hybrid_meco_frequency(m1, m2, chi1, chi2, qm1=None, qm2=None): """Return the frequency of the hybrid MECO Parameters ---------- m1 : float Mass of the primary object in solar masses. m2 : float Mass of the secondary object in solar masses. chi1: float Dimensionless s...	[ "def", "hybrid_meco_frequency", "(", "m1", ",", "m2", ",", "chi1", ",", "chi2", ",", "qm1", "=", "None", ",", "qm2", "=", "None", ")", ":", "if", "qm1", "is", "None", ":", "qm1", "=", "1", "if", "qm2", "is", "None", ":", "qm2", "=", "1", "retur...	30.580645	0.002045
def find_files(directory, ext=None, recurse=True, case_sensitive=False, limit=None, offset=0): '''Get a sorted list of (audio) files in a directory or directory sub-tree. Examples -------- >>> # Get all audio files in a directory sub-tree >>> files = librosa.util.find_files('~/Music'...	[ "def", "find_files", "(", "directory", ",", "ext", "=", "None", ",", "recurse", "=", "True", ",", "case_sensitive", "=", "False", ",", "limit", "=", "None", ",", "offset", "=", "0", ")", ":", "if", "ext", "is", "None", ":", "ext", "=", "[", "'aac'"...	26.772727	0.000409
def get_configdir(): """Return string representing the configuration directory. Default is $HOME/.config/glymur. You can override this with the XDG_CONFIG_HOME environment variable. """ if 'XDG_CONFIG_HOME' in os.environ: return os.path.join(os.environ['XDG_CONFIG_HOME'], 'glymur') if...	[ "def", "get_configdir", "(", ")", ":", "if", "'XDG_CONFIG_HOME'", "in", "os", ".", "environ", ":", "return", "os", ".", "path", ".", "join", "(", "os", ".", "environ", "[", "'XDG_CONFIG_HOME'", "]", ",", "'glymur'", ")", "if", "'HOME'", "in", "os", "."...	39.375	0.00155
def get_files(directory, recursive=False): """Return a list of all files in the directory.""" files_out = [] if recursive: for root, dirs, files in os.walk(os.path.abspath(directory)): files = [os.path.join(root, f) for f in files] files_out.append(files) files_out = ...	[ "def", "get_files", "(", "directory", ",", "recursive", "=", "False", ")", ":", "files_out", "=", "[", "]", "if", "recursive", ":", "for", "root", ",", "dirs", ",", "files", "in", "os", ".", "walk", "(", "os", ".", "path", ".", "abspath", "(", "dir...	40.928571	0.001706
def get_fastq_files_props(self,barcode=None): """ Returns the DNAnexus file properties for all FASTQ files in the project that match the specified barcode, or all FASTQ files if not barcode is specified. Args: barcode: `str`. If set, then only FASTQ file properties for FA...	[ "def", "get_fastq_files_props", "(", "self", ",", "barcode", "=", "None", ")", ":", "fastqs", "=", "self", ".", "get_fastq_dxfile_objects", "(", "barcode", "=", "barcode", ")", "#FastqNotFound Exception here if no FASTQs found for specified barcode.", "dico", "=", "{", ...	49.666667	0.014815
def send_audio_file( self, audio_file, device_state, authentication_headers, dialog_request_id, distance_profile, audio_format ): """ Send audio to AVS The file-like object are steaming uploaded for improved latency. Returns: bytes -- wav audio bytes ret...	[ "def", "send_audio_file", "(", "self", ",", "audio_file", ",", "device_state", ",", "authentication_headers", ",", "dialog_request_id", ",", "distance_profile", ",", "audio_format", ")", ":", "payload", "=", "{", "'context'", ":", "device_state", ",", "'event'", "...	30.5	0.001537
def delete_cloud_integration(self, id, **kwargs): # noqa: E501 """Delete a specific cloud integration # noqa: E501 # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async_req=True >>> thread = api.delete_c...	[ "def", "delete_cloud_integration", "(", "self", ",", "id", ",", "", "", "kwargs", ")", ":", "# noqa: E501", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'async_req'", ")", ":", "return", "self", ".", "del...	43.238095	0.002155
def nodes_touching_tile(tile_id): """ Get a list of node coordinates touching the given tile. :param tile_id: tile identifier, Tile.tile_id :return: list of node coordinates touching the given tile, list(int) """ coord = tile_id_to_coord(tile_id) nodes = [] for offset in _tile_node_offs...	[ "def", "nodes_touching_tile", "(", "tile_id", ")", ":", "coord", "=", "tile_id_to_coord", "(", "tile_id", ")", "nodes", "=", "[", "]", "for", "offset", "in", "_tile_node_offsets", ".", "keys", "(", ")", ":", "nodes", ".", "append", "(", "coord", "+", "of...	34.538462	0.002169
def _missing_values_set_to_nan(values, missing_value, sparse_missing): """ Return a copy of values where missing values (equal to missing_value) are replaced to nan according. If sparse_missing is True, entries missing in a sparse matrix will also be set to nan. Sparse matrices will be converted to dens...	[ "def", "_missing_values_set_to_nan", "(", "values", ",", "missing_value", ",", "sparse_missing", ")", ":", "if", "sp", ".", "issparse", "(", "values", ")", ":", "assert", "values", ".", "shape", "[", "0", "]", "==", "1", "if", "sparse_missing", "and", "sp"...	43.166667	0.000944
def updateBoostStrength(self): """ Update boost strength using given strength factor during training """ if self.training: self.boostStrength = self.boostStrength * self.boostStrengthFactor	[ "def", "updateBoostStrength", "(", "self", ")", ":", "if", "self", ".", "training", ":", "self", ".", "boostStrength", "=", "self", ".", "boostStrength", "*", "self", ".", "boostStrengthFactor" ]	34.333333	0.009479
def _move_modules(self, temp_repo, destination): """Move odoo modules from the temp directory to the destination. This step is different from a standard repository. In the base code of Odoo, the modules are contained in a addons folder at the root of the git repository. However, when de...	[ "def", "_move_modules", "(", "self", ",", "temp_repo", ",", "destination", ")", ":", "tmp_addons", "=", "os", ".", "path", ".", "join", "(", "temp_repo", ",", "'addons'", ")", "tmp_odoo_addons", "=", "os", ".", "path", ".", "join", "(", "temp_repo", ",",...	47.105263	0.002191
def convert(self, samplerate=None, n_channels=None, bitdepth=None): '''Converts output audio to the specified format. Parameters ---------- samplerate : float, default=None Desired samplerate. If None, defaults to the same as input. n_channels : int, default=None ...	[ "def", "convert", "(", "self", ",", "samplerate", "=", "None", ",", "n_channels", "=", "None", ",", "bitdepth", "=", "None", ")", ":", "bitdepths", "=", "[", "8", ",", "16", ",", "24", ",", "32", ",", "64", "]", "if", "bitdepth", "is", "not", "No...	38.542857	0.001446
def mpraw_as_np(shape, dtype): """Construct a numpy array of the specified shape and dtype for which the underlying storage is a multiprocessing RawArray in shared memory. Parameters ---------- shape : tuple Shape of numpy array dtype : data-type Data type of array Returns ...	[ "def", "mpraw_as_np", "(", "shape", ",", "dtype", ")", ":", "sz", "=", "int", "(", "np", ".", "product", "(", "shape", ")", ")", "csz", "=", "sz", "*", "np", ".", "dtype", "(", "dtype", ")", ".", "itemsize", "raw", "=", "mp", ".", "RawArray", "...	24.952381	0.001838
def _password_digest(username, password): """Get a password digest to use for authentication. """ if not isinstance(password, basestring): raise TypeError("password must be an instance of basestring") if not isinstance(username, basestring): raise TypeError("username must be an instance ...	[ "def", "_password_digest", "(", "username", ",", "password", ")", ":", "if", "not", "isinstance", "(", "password", ",", "basestring", ")", ":", "raise", "TypeError", "(", "\"password must be an instance of basestring\"", ")", "if", "not", "isinstance", "(", "usern...	43.166667	0.00189
def sendConnect(self, data): """Send a CONNECT command to the broker :param data: List of other broker main socket URL""" # Imported dynamically - Not used if only one broker if self.backend == 'ZMQ': import zmq self.context = zmq.Context() self.so...	[ "def", "sendConnect", "(", "self", ",", "data", ")", ":", "# Imported dynamically - Not used if only one broker", "if", "self", ".", "backend", "==", "'ZMQ'", ":", "import", "zmq", "self", ".", "context", "=", "zmq", ".", "Context", "(", ")", "self", ".", "s...	39.9	0.002448
def parse(self, fo): """ Convert MEME output to motifs Parameters ---------- fo : file-like File object containing MEME output. Returns ------- motifs : list List of Motif instances. """ motifs = [] ...	[ "def", "parse", "(", "self", ",", "fo", ")", ":", "motifs", "=", "[", "]", "nucs", "=", "{", "\"A\"", ":", "0", ",", "\"C\"", ":", "1", ",", "\"G\"", ":", "2", ",", "\"T\"", ":", "3", "}", "p", "=", "re", ".", "compile", "(", "'MOTIF.+MEME-(\...	31.94	0.017618
def write(parsed_obj, spec=None, filename=None): """Writes an object created by `parse` to either a file or a bytearray. If the object doesn't end on a byte boundary, zeroes are appended to it until it does. """ if not isinstance(parsed_obj, BreadStruct): raise ValueError( 'Obje...	[ "def", "write", "(", "parsed_obj", ",", "spec", "=", "None", ",", "filename", "=", "None", ")", ":", "if", "not", "isinstance", "(", "parsed_obj", ",", "BreadStruct", ")", ":", "raise", "ValueError", "(", "'Object to write must be a structure created '", "'by br...	37.625	0.001621
def y(self,args,*kwargs): """ NAME: y PURPOSE: return y INPUT: t - (optional) time at which to get y (can be Quantity) ro= (Object-wide default) physical scale for distances to use to convert (can be Quantity) use_physical= ...	[ "def", "y", "(", "self", ",", "", "args", ",", "", "", "kwargs", ")", ":", "out", "=", "self", ".", "_orb", ".", "y", "(", "", "args", ",", "", "", "kwargs", ")", "if", "len", "(", "out", ")", "==", "1", ":", "return", "out", "[", "...	19.366667	0.016393
def _multiseries(self, col, x, y, ctype, rsum, rmean): """ Chart multiple series from a column distinct values """ self.autoprint = False x, y = self._check_fields(x, y) chart = None series = self.split_(col) for key in series: instance = series[key] if rsum is not None: instance.rsum(rsum, in...	[ "def", "_multiseries", "(", "self", ",", "col", ",", "x", ",", "y", ",", "ctype", ",", "rsum", ",", "rmean", ")", ":", "self", ".", "autoprint", "=", "False", "x", ",", "y", "=", "self", ".", "_check_fields", "(", "x", ",", "y", ")", "chart", "...	23.777778	0.044893
def delete_directory(i): """ Input: { path - path to delete } Output: { return - return code = 0, if successful > 0, if error (error) - error text if return > 0 } """ import shu...	[ "def", "delete_directory", "(", "i", ")", ":", "import", "shutil", "p", "=", "i", "[", "'path'", "]", "if", "os", ".", "path", ".", "isdir", "(", "p", ")", ":", "shutil", ".", "rmtree", "(", "p", ",", "onerror", "=", "rm_read_only", ")", "return", ...	19.857143	0.009153
def execute(self, request, target_route): """ :meth:`.WWebServiceProto.execute` method implementation """ presenter = self.create_presenter(request, target_route) presenter_name = target_route.presenter_name() action_name = target_route.presenter_action() presenter_args = target_route.presenter_args() if...	[ "def", "execute", "(", "self", ",", "request", ",", "target_route", ")", ":", "presenter", "=", "self", ".", "create_presenter", "(", "request", ",", "target_route", ")", "presenter_name", "=", "target_route", ".", "presenter_name", "(", ")", "action_name", "=...	32.2	0.026701
def cmvnw(vec, win_size=301, variance_normalization=False): """ This function is aimed to perform local cepstral mean and variance normalization on a sliding window. The code assumes that there is one observation per row. Args: vec (array): input feature matrix (size:(num_observatio...	[ "def", "cmvnw", "(", "vec", ",", "win_size", "=", "301", ",", "variance_normalization", "=", "False", ")", ":", "# Get the shapes", "eps", "=", "2", "**", "-", "30", "rows", ",", "cols", "=", "vec", ".", "shape", "# Windows size must be odd.", "assert", "i...	35.925926	0.001004
def copy(self, keys = None): """ Return a copy of the segmentlistdict object. The return value is a new object with a new offsets attribute, with references to the original keys, and shallow copies of the segment lists. Modifications made to the offset dictionary or segmentlists in the object returned by ...	[ "def", "copy", "(", "self", ",", "keys", "=", "None", ")", ":", "if", "keys", "is", "None", ":", "keys", "=", "self", "new", "=", "self", ".", "__class__", "(", ")", "for", "key", "in", "keys", ":", "new", "[", "key", "]", "=", "_shallowcopy", ...	36.953488	0.025138
def OauthGetAccessToken(self): """ Use token_verifier to obtain an access token for the user. If this function returns True, the clients __oauth_token__ member contains the access token. @return (boolean) - Boolean indicating whether OauthGetRequestToken wa...	[ "def", "OauthGetAccessToken", "(", "self", ")", ":", "self", ".", "__setAuthenticationMethod__", "(", "'authenticating_oauth'", ")", "# obtain access token\r", "oauth_request", "=", "oauth", ".", "OAuthRequest", ".", "from_consumer_and_token", "(", "self", ".", "__oauth...	54.71875	0.015713
def extract_java_messages(): """ loop through java_*_0.out.txt and extract potentially dangerous WARN/ERRR/FATAL messages associated with a test. The test may even pass but something terrible has actually happened. :return: none """ global g_jenkins_url global g_failed_test_info_dict ...	[ "def", "extract_java_messages", "(", ")", ":", "global", "g_jenkins_url", "global", "g_failed_test_info_dict", "global", "g_java_filenames", "global", "g_failed_jobs", "# record job names of failed jobs", "global", "g_failed_job_java_messages", "# record failed job java message", "...	48.444444	0.011691
def inline_query(self): """The query ``str`` for :tl:`KeyboardButtonSwitchInline` objects.""" if isinstance(self.button, types.KeyboardButtonSwitchInline): return self.button.query	[ "def", "inline_query", "(", "self", ")", ":", "if", "isinstance", "(", "self", ".", "button", ",", "types", ".", "KeyboardButtonSwitchInline", ")", ":", "return", "self", ".", "button", ".", "query" ]	51.25	0.009615
def all_domain_events(self): """ Yields all domain events in the event store. """ for originator_id in self.record_manager.all_sequence_ids(): for domain_event in self.get_domain_events(originator_id=originator_id, page_size=100): yield domain_event	[ "def", "all_domain_events", "(", "self", ")", ":", "for", "originator_id", "in", "self", ".", "record_manager", ".", "all_sequence_ids", "(", ")", ":", "for", "domain_event", "in", "self", ".", "get_domain_events", "(", "originator_id", "=", "originator_id", ","...	43.285714	0.009709
def find_point_in_section_list(point, section_list): """Returns the start of the section the given point belongs to. The given list is assumed to contain start points of consecutive sections, except for the final point, assumed to be the end point of the last section. For example, the list [5, 8, 30, 3...	[ "def", "find_point_in_section_list", "(", "point", ",", "section_list", ")", ":", "if", "point", "<", "section_list", "[", "0", "]", "or", "point", ">", "section_list", "[", "-", "1", "]", ":", "return", "None", "if", "point", "in", "section_list", ":", ...	32.68	0.000594
def boundary_maximum_division(graph, xxx_todo_changeme5): r""" Boundary term processing adjacent voxels maximum value using a division relationship. An implementation of a boundary term, suitable to be used with the `~medpy.graphcut.generate.graph_from_voxels` function. The same as `bound...	[ "def", "boundary_maximum_division", "(", "graph", ",", "xxx_todo_changeme5", ")", ":", "(", "gradient_image", ",", "sigma", ",", "spacing", ")", "=", "xxx_todo_changeme5", "gradient_image", "=", "scipy", ".", "asarray", "(", "gradient_image", ")", "def", "boundary...	38.837209	0.008178
def findUiActions( widget ): """ Looks up actions for the inputed widget based on naming convention. :param widget \| <QWidget> :return [<QAction>, ..] """ import_qt(globals()) output = [] for action in widget.findChildren(QtGui.QAction): name =...	[ "def", "findUiActions", "(", "widget", ")", ":", "import_qt", "(", "globals", "(", ")", ")", "output", "=", "[", "]", "for", "action", "in", "widget", ".", "findChildren", "(", "QtGui", ".", "QAction", ")", ":", "name", "=", "nativestring", "(", "actio...	29.0625	0.016667
def range_per(self): """ Range percentage 計算最新日之漲跌幅度百分比 """ rp = float((self.raw_data[-1] - self.raw_data[-2]) / self.raw_data[-2] * 100) return rp	[ "def", "range_per", "(", "self", ")", ":", "rp", "=", "float", "(", "(", "self", ".", "raw_data", "[", "-", "1", "]", "-", "self", ".", "raw_data", "[", "-", "2", "]", ")", "/", "self", ".", "raw_data", "[", "-", "2", "]", "*", "100", ")", ...	27.666667	0.011696
def cut(self, sentence, cut_all=False, HMM=True): ''' The main function that segments an entire sentence that contains Chinese characters into separated words. Parameter: - sentence: The str(unicode) to be segmented. - cut_all: Model type. True for full pattern, ...	[ "def", "cut", "(", "self", ",", "sentence", ",", "cut_all", "=", "False", ",", "HMM", "=", "True", ")", ":", "sentence", "=", "strdecode", "(", "sentence", ")", "if", "cut_all", ":", "re_han", "=", "re_han_cut_all", "re_skip", "=", "re_skip_cut_all", "el...	32.512195	0.002185
def pickle_all(self, path): """Back up entire JSS to a Python Pickle. For each object type, retrieve all objects, and then pickle the entire smorgasbord. This will almost certainly take a long time! Pickling is Python's method for serializing/deserializing Python object...	[ "def", "pickle_all", "(", "self", ",", "path", ")", ":", "all_search_methods", "=", "[", "(", "name", ",", "self", ".", "__getattribute__", "(", "name", ")", ")", "for", "name", "in", "dir", "(", "self", ")", "if", "name", "[", "0", "]", ".", "isup...	46.611111	0.001751
def Seek(self, offset, whence=os.SEEK_SET): """Moves the reading cursor.""" if whence == os.SEEK_SET: self._offset = offset elif whence == os.SEEK_CUR: self._offset += offset elif whence == os.SEEK_END: self._offset = self._length + offset else: raise ValueError("Invalid whe...	[ "def", "Seek", "(", "self", ",", "offset", ",", "whence", "=", "os", ".", "SEEK_SET", ")", ":", "if", "whence", "==", "os", ".", "SEEK_SET", ":", "self", ".", "_offset", "=", "offset", "elif", "whence", "==", "os", ".", "SEEK_CUR", ":", "self", "."...	30.636364	0.014409
def watch(self, filepath, func=None, delay=None, ignore=None): """Add the given filepath for watcher list. Once you have intialized a server, watch file changes before serve the server:: server.watch('static/*.stylus', 'make static') def alert(): print('...	[ "def", "watch", "(", "self", ",", "filepath", ",", "func", "=", "None", ",", "delay", "=", "None", ",", "ignore", "=", "None", ")", ":", "if", "isinstance", "(", "func", ",", "string_types", ")", ":", "cmd", "=", "func", "func", "=", "shell", "(", ...	41.793103	0.001613
def index_humansorted(seq, key=None, reverse=False, alg=ns.DEFAULT): """ This is a wrapper around ``index_natsorted(seq, alg=ns.LOCALE)``. Parameters ---------- seq: iterable The input to sort. key: callable, optional A key used to determine how to sort each element of the sequ...	[ "def", "index_humansorted", "(", "seq", ",", "key", "=", "None", ",", "reverse", "=", "False", ",", "alg", "=", "ns", ".", "DEFAULT", ")", ":", "return", "index_natsorted", "(", "seq", ",", "key", ",", "reverse", ",", "alg", "\|", "ns", ".", "LOCALE",...	26.659574	0.00077
def next(self, timeout=0): """Return empty unless new data is ready for the client. Arguments: timeout: Default timeout=0 range zero to float specifies a time-out as a floating point number in seconds. Will sit and wait for timeout seconds. When the timeout argument is omitted ...	[ "def", "next", "(", "self", ",", "timeout", "=", "0", ")", ":", "try", ":", "waitin", ",", "_waitout", ",", "_waiterror", "=", "select", ".", "select", "(", "(", "self", ".", "streamSock", ",", ")", ",", "(", ")", ",", "(", ")", ",", "timeout", ...	52.666667	0.009326
def CopyToDict(self): """Copies the attribute container to a dictionary. Returns: dict[str, object]: attribute values per name. """ dictionary = {} for attribute_name, attribute_value in self.GetAttributes(): if attribute_value is None: continue dictionary[attribute_name]...	[ "def", "CopyToDict", "(", "self", ")", ":", "dictionary", "=", "{", "}", "for", "attribute_name", ",", "attribute_value", "in", "self", ".", "GetAttributes", "(", ")", ":", "if", "attribute_value", "is", "None", ":", "continue", "dictionary", "[", "attribute...	24.857143	0.00831
def get(path): ''' Get the content of the docker-compose file into a directory path Path where the docker-compose file is stored on the server CLI Example: .. code-block:: bash salt myminion dockercompose.get /path/where/docker-compose/stored ''' file_path = __get_docker_...	[ "def", "get", "(", "path", ")", ":", "file_path", "=", "__get_docker_file_path", "(", "path", ")", "if", "file_path", "is", "None", ":", "return", "__standardize_result", "(", "False", ",", "'Path {} is not present'", ".", "format", "(", "path", ")", ",", "N...	30.111111	0.001192
def _values(self): """Getter for series values (flattened)""" return [abs(val) for val in super(Dot, self)._values if val != 0]	[ "def", "_values", "(", "self", ")", ":", "return", "[", "abs", "(", "val", ")", "for", "val", "in", "super", "(", "Dot", ",", "self", ")", ".", "_values", "if", "val", "!=", "0", "]" ]	47	0.013986
def Clapeyron(T, Tc, Pc, dZ=1, Psat=101325): r'''Calculates enthalpy of vaporization at arbitrary temperatures using the Clapeyron equation. The enthalpy of vaporization is given by: .. math:: \Delta H_{vap} = RT \Delta Z \frac{\ln (P_c/Psat)}{(1-T_{r})} Parameters ---------- T : ...	[ "def", "Clapeyron", "(", "T", ",", "Tc", ",", "Pc", ",", "dZ", "=", "1", ",", "Psat", "=", "101325", ")", ":", "Tr", "=", "T", "/", "Tc", "return", "R", "", "T", "", "dZ", "*", "log", "(", "Pc", "/", "Psat", ")", "/", "(", "1.", "-", ...	26.769231	0.001386
def reads_overlapping_variants(variants, samfile, **kwargs): """ Generates sequence of tuples, each containing a variant paired with a list of AlleleRead objects. Parameters ---------- variants : varcode.VariantCollection samfile : pysam.AlignmentFile use_duplicate_reads : bool ...	[ "def", "reads_overlapping_variants", "(", "variants", ",", "samfile", ",", "", "", "kwargs", ")", ":", "chromosome_names", "=", "set", "(", "samfile", ".", "references", ")", "for", "variant", "in", "variants", ":", "# I imagine the conversation went like this:", ...	34.553191	0.000599
def sum_transactions(transactions): """ Sums transactions into a total of remaining vacation days. """ workdays_per_year = 250 previous_date = None rate = 0 day_sum = 0 for transaction in transactions: date, action, value = _parse_transaction_entry(transaction) if previous_date i...	[ "def", "sum_transactions", "(", "transactions", ")", ":", "workdays_per_year", "=", "250", "previous_date", "=", "None", "rate", "=", "0", "day_sum", "=", "0", "for", "transaction", "in", "transactions", ":", "date", ",", "action", ",", "value", "=", "_parse...	31.92	0.002433
def dropout_mask(x:Tensor, sz:Collection[int], p:float): "Return a dropout mask of the same type as `x`, size `sz`, with probability `p` to cancel an element." return x.new(*sz).bernoulli_(1-p).div_(1-p)	[ "def", "dropout_mask", "(", "x", ":", "Tensor", ",", "sz", ":", "Collection", "[", "int", "]", ",", "p", ":", "float", ")", ":", "return", "x", ".", "new", "(", "*", "sz", ")", ".", "bernoulli_", "(", "1", "-", "p", ")", ".", "div_", "(", "1"...	69.666667	0.023697
def find_string_in_dict_or_list(i): """ Input: { dict - dictionary 1 (search_string) - search string (ignore_case) - ignore case of letters } Output: { return - return code = 0, if successful ...	[ "def", "find_string_in_dict_or_list", "(", "i", ")", ":", "d", "=", "i", ".", "get", "(", "'dict'", ",", "{", "}", ")", "found", "=", "'no'", "wc", "=", "False", "ss", "=", "i", ".", "get", "(", "'search_string'", ",", "''", ")", "if", "ss", ".",...	23.821429	0.043916
def _speak_as( self, element, regular_expression, data_property_value, operation ): """ Execute a operation by regular expression for element only. :param element: The element. :type element: hatemile.util.html.htmldomelement.HTMLDOMElement ...	[ "def", "_speak_as", "(", "self", ",", "element", ",", "regular_expression", ",", "data_property_value", ",", "operation", ")", ":", "children", "=", "[", "]", "pattern", "=", "re", ".", "compile", "(", "regular_expression", ")", "content", "=", "element", "....	33.386364	0.001984
def generate_path_parameters_validator(api_path, path_parameters, context): """ Generates a validator function that given a path, validates that it against the path parameters """ path_parameter_validator = functools.partial( validate_path_parameters, api_path=api_path, path_...	[ "def", "generate_path_parameters_validator", "(", "api_path", ",", "path_parameters", ",", "context", ")", ":", "path_parameter_validator", "=", "functools", ".", "partial", "(", "validate_path_parameters", ",", "api_path", "=", "api_path", ",", "path_parameters", "=", ...	33.583333	0.002415
def form_invalid(self, post_form, attachment_formset, poll_option_formset, **kwargs): """ Processes invalid forms. """ poll_errors = [k for k in post_form.errors.keys() if k.startswith('poll_')] if ( poll_errors or ( poll_option_formset and ...	[ "def", "form_invalid", "(", "self", ",", "post_form", ",", "attachment_formset", ",", "poll_option_formset", ",", "", "", "kwargs", ")", ":", "poll_errors", "=", "[", "k", "for", "k", "in", "post_form", ".", "errors", ".", "keys", "(", ")", "if", "k", ...	43.466667	0.009009
def _xml_to_dict(xml): ''' Helper function to covert xml into a data dictionary. xml The xml data to convert. ''' dicts = {} for item in xml: key = item.tag.lower() idx = 1 while key in dicts: key += six.text_type(idx) idx += 1 if ...	[ "def", "_xml_to_dict", "(", "xml", ")", ":", "dicts", "=", "{", "}", "for", "item", "in", "xml", ":", "key", "=", "item", ".", "tag", ".", "lower", "(", ")", "idx", "=", "1", "while", "key", "in", "dicts", ":", "key", "+=", "six", ".", "text_ty...	21.5	0.002227
def extract_citation_context(self, n_words=20): """Generate a dictionary of all bib keys in the document (and input documents), with rich of metadata about the context of each citation in the document. For example, suppose ``'Sick:2014'`` is cited twice within a document. Then t...	[ "def", "extract_citation_context", "(", "self", ",", "n_words", "=", "20", ")", ":", "bib_keys", "=", "defaultdict", "(", "list", ")", "# Get bib keys in this document", "for", "match", "in", "texutils", ".", "cite_pattern", ".", "finditer", "(", "self", ".", ...	40.461538	0.000742
def save_figure(self,event=None, transparent=True, dpi=600): """ save figure image to file""" if self.panel is not None: self.panel.save_figure(event=event, transparent=transparent, dpi=dpi)	[ "def", "save_figure", "(", "self", ",", "event", "=", "None", ",", "transparent", "=", "True", ",", "dpi", "=", "600", ")", ":", "if", "self", ".", "panel", "is", "not", "None", ":", "self", ".", "panel", ".", "save_figure", "(", "event", "=", "eve...	49.8	0.011858
def load(steps, reload=False): """ safely load steps in place, excluding those that fail Args: steps: the steps to load """ # work on collections by default for fewer isinstance() calls per call to load() if reload: _STEP_CACHE.clear() if callable(steps): steps = ste...	[ "def", "load", "(", "steps", ",", "reload", "=", "False", ")", ":", "# work on collections by default for fewer isinstance() calls per call to load()", "if", "reload", ":", "_STEP_CACHE", ".", "clear", "(", ")", "if", "callable", "(", "steps", ")", ":", "steps", "...	26.774194	0.002326
def _default_pprint(obj, p, cycle): """ The default print function. Used if an object does not provide one and it's none of the builtin objects. """ klass = getattr(obj, '__class__', None) or type(obj) if getattr(klass, '__repr__', None) not in _baseclass_reprs: # A user-provided repr. ...	[ "def", "_default_pprint", "(", "obj", ",", "p", ",", "cycle", ")", ":", "klass", "=", "getattr", "(", "obj", ",", "'__class__'", ",", "None", ")", "or", "type", "(", "obj", ")", "if", "getattr", "(", "klass", ",", "'__repr__'", ",", "None", ")", "n...	31.027778	0.000868
def combine_results(self, results): """Combine results from different batches of filtering""" result = {} for key in results[0]: result[key] = numpy.concatenate([r[key] for r in results]) return result	[ "def", "combine_results", "(", "self", ",", "results", ")", ":", "result", "=", "{", "}", "for", "key", "in", "results", "[", "0", "]", ":", "result", "[", "key", "]", "=", "numpy", ".", "concatenate", "(", "[", "r", "[", "key", "]", "for", "r", ...	40	0.008163
def set_server(self, wsgi_app, fnc_serve=None): """ figures out how the wsgi application is to be served according to config """ self.set_wsgi_app(wsgi_app) ssl_config = self.get_config("ssl") ssl_context = {} if self.get_config("server") == "gevent": ...	[ "def", "set_server", "(", "self", ",", "wsgi_app", ",", "fnc_serve", "=", "None", ")", ":", "self", ".", "set_wsgi_app", "(", "wsgi_app", ")", "ssl_config", "=", "self", ".", "get_config", "(", "\"ssl\"", ")", "ssl_context", "=", "{", "}", "if", "self", ...	26.071429	0.00132
def _remove_curly_braces(text): """Remove everything in curly braces. Curly braces may be nested, so we keep track of depth. Args: text: a string Returns: a string """ current_pos = 0 depth = 0 ret = "" for match in re.finditer("[{}]", text): if depth == 0: ret += text[current_pos:...	[ "def", "_remove_curly_braces", "(", "text", ")", ":", "current_pos", "=", "0", "depth", "=", "0", "ret", "=", "\"\"", "for", "match", "in", "re", ".", "finditer", "(", "\"[{}]\"", ",", "text", ")", ":", "if", "depth", "==", "0", ":", "ret", "+=", "...	22.84	0.016807
def _api_decrypt(): ''' Return the response dictionary from the KMS decrypt API call. ''' kms = _kms() data_key = _cfg_data_key() try: return kms.decrypt(CiphertextBlob=data_key) except botocore.exceptions.ClientError as orig_exc: error_code = orig_exc.response.get('Error', {...	[ "def", "_api_decrypt", "(", ")", ":", "kms", "=", "_kms", "(", ")", "data_key", "=", "_cfg_data_key", "(", ")", "try", ":", "return", "kms", ".", "decrypt", "(", "CiphertextBlob", "=", "data_key", ")", "except", "botocore", ".", "exceptions", ".", "Clien...	38.666667	0.001684
def get_repo_info(repo_name, profile='github', ignore_cache=False): ''' Return information for a given repo. .. versionadded:: 2016.11.0 repo_name The name of the repository. profile The name of the profile configuration to use. Defaults to ``github``. CLI Example: .. co...	[ "def", "get_repo_info", "(", "repo_name", ",", "profile", "=", "'github'", ",", "ignore_cache", "=", "False", ")", ":", "org_name", "=", "_get_config_value", "(", "profile", ",", "'org_name'", ")", "key", "=", "\"github.{0}:{1}:repo_info\"", ".", "format", "(", ...	30.367347	0.001302
def checkcache(filename=None): """Discard cache entries that are out of date. (This is not checked upon each call!)""" if filename is None: filenames = cache.keys() else: if filename in cache: filenames = [filename] else: return for filename in filen...	[ "def", "checkcache", "(", "filename", "=", "None", ")", ":", "if", "filename", "is", "None", ":", "filenames", "=", "cache", ".", "keys", "(", ")", "else", ":", "if", "filename", "in", "cache", ":", "filenames", "=", "[", "filename", "]", "else", ":"...	29.043478	0.001449
def get_value(self, value): """ Replace variable names with placeholders (e.g. ':v1') """ next_key = ":v%d" % self._next_value self._next_value += 1 self._values[next_key] = value return next_key	[ "def", "get_value", "(", "self", ",", "value", ")", ":", "next_key", "=", "\":v%d\"", "%", "self", ".", "_next_value", "self", ".", "_next_value", "+=", "1", "self", ".", "_values", "[", "next_key", "]", "=", "value", "return", "next_key" ]	38.333333	0.008511
def effective_n(mcmc): """ Args: mcmc (MCMCResults): Pre-sliced MCMC samples to compute diagnostics for. """ if mcmc.n_chains < 2: raise ValueError( 'Calculation of effective sample size requires multiple chains ' 'of the same length.') def get_neff(x): ...	[ "def", "effective_n", "(", "mcmc", ")", ":", "if", "mcmc", ".", "n_chains", "<", "2", ":", "raise", "ValueError", "(", "'Calculation of effective sample size requires multiple chains '", "'of the same length.'", ")", "def", "get_neff", "(", "x", ")", ":", "\"\"\"Com...	36.614035	0.0014
def reset(self): """Reset metric counter.""" self._positions = [] self._line = 1 self._curr = None # current scope we are analyzing self._scope = 0 self.language = None	[ "def", "reset", "(", "self", ")", ":", "self", ".", "_positions", "=", "[", "]", "self", ".", "_line", "=", "1", "self", ".", "_curr", "=", "None", "# current scope we are analyzing", "self", ".", "_scope", "=", "0", "self", ".", "language", "=", "None...	30.142857	0.009217
def build_attrs(self, base_attrs, extra_attrs=None, kwargs): """ Helper function for building an attribute dictionary. This is combination of the same method from Django<=1.10 and Django1.11+ """ attrs = dict(base_attrs, kwargs) if extra_attrs: attrs.upda...	[ "def", "build_attrs", "(", "self", ",", "base_attrs", ",", "extra_attrs", "=", "None", ",", "", "", "kwargs", ")", ":", "attrs", "=", "dict", "(", "base_attrs", ",", "", "", "kwargs", ")", "if", "extra_attrs", ":", "attrs", ".", "update", "(", "e...	34.7	0.008427
def _get_result_paths(self, data): """ Set the result paths """ # Swarm OTU map (mandatory output) return {'OtuMap': ResultPath(Path=self.Parameters['-o'].Value, IsWritten=True)}	[ "def", "_get_result_paths", "(", "self", ",", "data", ")", ":", "# Swarm OTU map (mandatory output)", "return", "{", "'OtuMap'", ":", "ResultPath", "(", "Path", "=", "self", ".", "Parameters", "[", "'-o'", "]", ".", "Value", ",", "IsWritten", "=", "True", ")...	34.571429	0.008065
def get_operation_status(kwargs=None, conn=None, call=None): ''' .. versionadded:: 2015.8.0 Get Operation Status, based on a request ID CLI Example: .. code-block:: bash salt-cloud -f get_operation_status my-azure id=0123456789abcdef0123456789abcdef ''' if call != 'function': ...	[ "def", "get_operation_status", "(", "kwargs", "=", "None", ",", "conn", "=", "None", ",", "call", "=", "None", ")", ":", "if", "call", "!=", "'function'", ":", "raise", "SaltCloudSystemExit", "(", "'The show_instance function must be called with -f or --function.'", ...	24.102564	0.002045
def main(func=None, argv=None, input_stream=stdin, output_stream=stdout, error_stream=stderr, exit=True): """runs a function as a command. runs a function as a command - reading input from `input_stream`, writing output into `output_stream` and providing arguments from `argv`. Example Usage: ...	[ "def", "main", "(", "func", "=", "None", ",", "argv", "=", "None", ",", "input_stream", "=", "stdin", ",", "output_stream", "=", "stdout", ",", "error_stream", "=", "stderr", ",", "exit", "=", "True", ")", ":", "executor", "=", "executors", ".", "get_f...	36.891892	0.000714
def summarize_ranges(array): """ :type array: List[int] :rtype: List[] """ res = [] if len(array) == 1: return [str(array[0])] i = 0 while i < len(array): num = array[i] while i + 1 < len(array) and array[i + 1] - array[i] == 1: i += 1 if array...	[ "def", "summarize_ranges", "(", "array", ")", ":", "res", "=", "[", "]", "if", "len", "(", "array", ")", "==", "1", ":", "return", "[", "str", "(", "array", "[", "0", "]", ")", "]", "i", "=", "0", "while", "i", "<", "len", "(", "array", ")", ...	22.736842	0.002222
def setModelData(self, editor, model, index): """ Updates the item with the new data value. :param editor \| <QtGui.QWidget> model \| <QtGui.QModel> index \| <QtGui.QModelIndex> """ value = editor.currentText() ...	[ "def", "setModelData", "(", "self", ",", "editor", ",", "model", ",", "index", ")", ":", "value", "=", "editor", ".", "currentText", "(", ")", "model", ".", "setData", "(", "index", ",", "wrapVariant", "(", "value", ")", ")" ]	35.5	0.008242
def parse_v3_signing_block(self): """ Parse the V2 signing block and extract all features """ self._v3_signing_data = [] # calling is_signed_v3 should also load the signature, if any if not self.is_signed_v3(): return block_bytes = self._v2_blocks[s...	[ "def", "parse_v3_signing_block", "(", "self", ")", ":", "self", ".", "_v3_signing_data", "=", "[", "]", "# calling is_signed_v3 should also load the signature, if any", "if", "not", "self", ".", "is_signed_v3", "(", ")", ":", "return", "block_bytes", "=", "self", "....	35.877551	0.001384
def vectorized_beta(dependents, independent, allowed_missing, out=None): """ Compute slopes of linear regressions between columns of ``dependents`` and ``independent``. Parameters ---------- dependents : np.array[N, M] Array with columns of data to be regressed against ``independent``. ...	[ "def", "vectorized_beta", "(", "dependents", ",", "independent", ",", "allowed_missing", ",", "out", "=", "None", ")", ":", "# Cache these as locals since we're going to call them multiple times.", "nan", "=", "np", ".", "nan", "isnan", "=", "np", ".", "isnan", "N",...	34.957447	0.000296
def uninitialize_ui(self): """ Uninitializes the Component ui. :return: Method success. :rtype: bool """ LOGGER.debug("> Uninitializing '{0}' Component ui.".format(self.__class__.__name__)) # Signals / Slots. self.Port_spinBox.valueChanged.disconnect(se...	[ "def", "uninitialize_ui", "(", "self", ")", ":", "LOGGER", ".", "debug", "(", "\"> Uninitializing '{0}' Component ui.\"", ".", "format", "(", "self", ".", "__class__", ".", "__name__", ")", ")", "# Signals / Slots.", "self", ".", "Port_spinBox", ".", "valueChanged...	38.473684	0.008011
def get_sdr_data_helper(reserve_fn, get_fn, record_id, reservation_id=None): """Helper function to retrieve the sdr data using the specified functions. This can be used for SDRs from the Sensor Device or form the SDR repository. """ if reservation_id is None: reservation_id = reserve_f...	[ "def", "get_sdr_data_helper", "(", "reserve_fn", ",", "get_fn", ",", "record_id", ",", "reservation_id", "=", "None", ")", ":", "if", "reservation_id", "is", "None", ":", "reservation_id", "=", "reserve_fn", "(", ")", "(", "next_id", ",", "data", ")", "=", ...	29.192308	0.000637
def urlopen(self, method, url, body=None, headers=None, **kwargs): """Implementation of urllib3's urlopen.""" # pylint: disable=arguments-differ # We use kwargs to collect additional args that we don't need to # introspect here. However, we do explicitly collect the two # positio...	[ "def", "urlopen", "(", "self", ",", "method", ",", "url", ",", "body", "=", "None", ",", "headers", "=", "None", ",", "", "", "kwargs", ")", ":", "# pylint: disable=arguments-differ", "# We use kwargs to collect additional args that we don't need to", "# introspect ...	42.102041	0.000947
def series2df(Series, layer=2, split_sign = '_'): """expect pass a series that each row is string formated Json data with the same structure""" try: Series.columns Series = Series.iloc[:,0] except: pass def _helper(x, layer=2): try: return flatten_dict(as...	[ "def", "series2df", "(", "Series", ",", "layer", "=", "2", ",", "split_sign", "=", "'_'", ")", ":", "try", ":", "Series", ".", "columns", "Series", "=", "Series", ".", "iloc", "[", ":", ",", "0", "]", "except", ":", "pass", "def", "_helper", "(", ...	29.3	0.021488
def _iter_avro_blocks(fo, header, codec, writer_schema, reader_schema): """Return iterator over avro blocks.""" sync_marker = header['sync'] read_block = BLOCK_READERS.get(codec) if not read_block: raise ValueError('Unrecognized codec: %r' % codec) while True: offset = fo.tell() ...	[ "def", "_iter_avro_blocks", "(", "fo", ",", "header", ",", "codec", ",", "writer_schema", ",", "reader_schema", ")", ":", "sync_marker", "=", "header", "[", "'sync'", "]", "read_block", "=", "BLOCK_READERS", ".", "get", "(", "codec", ")", "if", "not", "rea...	25.92	0.001488
def query_version(stream: aioxmpp.stream.StanzaStream, target: aioxmpp.JID) -> version_xso.Query: """ Query the software version of an entity. :param stream: A stanza stream to send the query on. :type stream: :class:`aioxmpp.stream.StanzaStream` :param target: The address of the ...	[ "def", "query_version", "(", "stream", ":", "aioxmpp", ".", "stream", ".", "StanzaStream", ",", "target", ":", "aioxmpp", ".", "JID", ")", "->", "version_xso", ".", "Query", ":", "return", "(", "yield", "from", "stream", ".", "send", "(", "aioxmpp", ".",...	38.107143	0.000914
def generate_basis(z): """ Generate an arbitrary basis (also known as a coordinate frame) from a given z-axis vector. Parameters ---------- z: (3,) float A vector along the positive z-axis Returns ------- x : (3,) float Vector along x axis y : (3,) float Vecto...	[ "def", "generate_basis", "(", "z", ")", ":", "# get a copy of input vector", "z", "=", "np", ".", "array", "(", "z", ",", "dtype", "=", "np", ".", "float64", ",", "copy", "=", "True", ")", "# must be a 3D vector", "if", "z", ".", "shape", "!=", "(", "3...	26	0.000862
def filter_mean(matrix, top): """Filter genes in an expression matrix by mean expression. Parameters ---------- matrix: ExpMatrix The expression matrix. top: int The number of genes to retain. Returns ------- ExpMatrix The filtered expression matrix. """ ...	[ "def", "filter_mean", "(", "matrix", ",", "top", ")", ":", "assert", "isinstance", "(", "matrix", ",", "ExpMatrix", ")", "assert", "isinstance", "(", "top", ",", "int", ")", "if", "top", ">=", "matrix", ".", "p", ":", "logger", ".", "warning", "(", "...	23.096774	0.00134
def p_expr_label(p): """ expr : ID """ p[0] = Expr.makenode(Container(MEMORY.get_label(p[1], p.lineno(1)), p.lineno(1)))	[ "def", "p_expr_label", "(", "p", ")", ":", "p", "[", "0", "]", "=", "Expr", ".", "makenode", "(", "Container", "(", "MEMORY", ".", "get_label", "(", "p", "[", "1", "]", ",", "p", ".", "lineno", "(", "1", ")", ")", ",", "p", ".", "lineno", "("...	32.25	0.015152
def delete(self, ignore=None): """Yield tuple with deleted index name and responses from a client.""" ignore = ignore or [] def _delete(tree_or_filename, alias=None): """Delete indexes and aliases by walking DFS.""" if alias: yield alias, self.client.indi...	[ "def", "delete", "(", "self", ",", "ignore", "=", "None", ")", ":", "ignore", "=", "ignore", "or", "[", "]", "def", "_delete", "(", "tree_or_filename", ",", "alias", "=", "None", ")", ":", "\"\"\"Delete indexes and aliases by walking DFS.\"\"\"", "if", "alias"...	36.730769	0.002041
def update(self, roomId, title=None, request_parameters): """Update details for a room, by ID. Args: roomId(basestring): The room ID. title(basestring): A user-friendly name for the room. request_parameters: Additional request parameters (provides ...	[ "def", "update", "(", "self", ",", "roomId", ",", "title", "=", "None", ",", "", "", "request_parameters", ")", ":", "check_type", "(", "roomId", ",", "basestring", ",", "may_be_none", "=", "False", ")", "check_type", "(", "roomId", ",", "basestring", ...	34.83871	0.001802
def get_vaults_by_query(self, vault_query): """Gets a list of ``Vault`` objects matching the given search. arg: vault_query (osid.authorization.VaultQuery): the vault query return: (osid.authorization.VaultList) - the returned ``VaultList`` raise: Nul...	[ "def", "get_vaults_by_query", "(", "self", ",", "vault_query", ")", ":", "# Implemented from template for", "# osid.resource.BinQuerySession.get_bins_by_query_template", "if", "self", ".", "_catalog_session", "is", "not", "None", ":", "return", "self", ".", "_catalog_sessio...	48.12	0.00163
def update(self, forecasts, observations): """ Update the statistics with forecasts and observations. Args: forecasts: The discrete Cumulative Distribution Functions of observations: """ if len(observations.shape) == 1: obs_cdfs = np.zeros((ob...	[ "def", "update", "(", "self", ",", "forecasts", ",", "observations", ")", ":", "if", "len", "(", "observations", ".", "shape", ")", "==", "1", ":", "obs_cdfs", "=", "np", ".", "zeros", "(", "(", "observations", ".", "size", ",", "self", ".", "thresho...	42.315789	0.002433
def get_userlist(self): """ This collects all the users with open files on the system, and filters based on the variables user_include and user_exclude """ # convert user/group lists to arrays if strings if isinstance(self.config['user_include'], basestring): sel...	[ "def", "get_userlist", "(", "self", ")", ":", "# convert user/group lists to arrays if strings", "if", "isinstance", "(", "self", ".", "config", "[", "'user_include'", "]", ",", "basestring", ")", ":", "self", ".", "config", "[", "'user_include'", "]", "=", "se...	44.272727	0.000502
def populateFromFile(self, dataUrl): """ Populates the instance variables of this FeatureSet from the specified data URL. """ self._dbFilePath = dataUrl self._db = Gff3DbBackend(self._dbFilePath)	[ "def", "populateFromFile", "(", "self", ",", "dataUrl", ")", ":", "self", ".", "_dbFilePath", "=", "dataUrl", "self", ".", "_db", "=", "Gff3DbBackend", "(", "self", ".", "_dbFilePath", ")" ]	33.857143	0.00823
def loss_value(self, x_data, y_true, y_pred): """ Calculate a value of loss function """ y_pred = y_pred.view(-1, y_pred.size(2)) y_true = y_true.view(-1).to(torch.long) return F.nll_loss(y_pred, y_true)	[ "def", "loss_value", "(", "self", ",", "x_data", ",", "y_true", ",", "y_pred", ")", ":", "y_pred", "=", "y_pred", ".", "view", "(", "-", "1", ",", "y_pred", ".", "size", "(", "2", ")", ")", "y_true", "=", "y_true", ".", "view", "(", "-", "1", "...	46.2	0.008511
def _CaptureEnvironmentLabels(self): """Captures information about the environment, if possible.""" if 'labels' not in self.breakpoint: self.breakpoint['labels'] = {} if callable(breakpoint_labels_collector): for (key, value) in six.iteritems(breakpoint_labels_collector()): self.breakpo...	[ "def", "_CaptureEnvironmentLabels", "(", "self", ")", ":", "if", "'labels'", "not", "in", "self", ".", "breakpoint", ":", "self", ".", "breakpoint", "[", "'labels'", "]", "=", "{", "}", "if", "callable", "(", "breakpoint_labels_collector", ")", ":", "for", ...	42.375	0.008671
def create_cud_from_task(task, placeholder_dict, prof=None): """ Purpose: Create a Compute Unit description based on the defined Task. :arguments: :task: EnTK Task object :placeholder_dict: dictionary holding the values for placeholders :return: ComputeUnitDescription """ try:...	[ "def", "create_cud_from_task", "(", "task", ",", "placeholder_dict", ",", "prof", "=", "None", ")", ":", "try", ":", "logger", ".", "debug", "(", "'Creating CU from Task %s'", "%", "(", "task", ".", "uid", ")", ")", "if", "prof", ":", "prof", ".", "prof"...	37.803279	0.002113
def show_distance_matrix(self): """! @brief Shows gray visualization of U-matrix (distance matrix). @see get_distance_matrix() """ distance_matrix = self.get_distance_matrix() plt.imshow(distance_matrix, cmap = plt.get_cmap('hot'), inte...	[ "def", "show_distance_matrix", "(", "self", ")", ":", "distance_matrix", "=", "self", ".", "get_distance_matrix", "(", ")", "plt", ".", "imshow", "(", "distance_matrix", ",", "cmap", "=", "plt", ".", "get_cmap", "(", "'hot'", ")", ",", "interpolation", "=", ...	30.923077	0.019324
def _get_postvalue_from_absoluteURI(url): """Bug [ 1513000 ] POST Request-URI not limited to "abs_path" Request-URI = "*" \| absoluteURI \| abs_path \| authority Not a complete solution, but it seems to work with all known implementations. ValueError thrown if bad uri. """ cache = _get_postva...	[ "def", "_get_postvalue_from_absoluteURI", "(", "url", ")", ":", "cache", "=", "_get_postvalue_from_absoluteURI", ".", "cache", "path", "=", "cache", ".", "get", "(", "url", ",", "''", ")", "if", "not", "path", ":", "scheme", ",", "authpath", "=", "url", "....	38.625	0.011058
def IntegerMultiplication(left: vertex_constructor_param_types, right: vertex_constructor_param_types, label: Optional[str]=None) -> Vertex: """ Multiplies one vertex by another :param left: a vertex to be multiplied :param right: a vertex to be multiplied """ return Integer(context.jvm_vie...	[ "def", "IntegerMultiplication", "(", "left", ":", "vertex_constructor_param_types", ",", "right", ":", "vertex_constructor_param_types", ",", "label", ":", "Optional", "[", "str", "]", "=", "None", ")", "->", "Vertex", ":", "return", "Integer", "(", "context", "...	51.625	0.014286
def _load_steps(self, raw_steps): """ load steps -> basically load all the datetime isoformats into datetimes """ for step in raw_steps: if 'start' in step: step['start'] = parser.parse(step['start']) if 'stop' in step: step['stop'] = parser.parse(...	[ "def", "_load_steps", "(", "self", ",", "raw_steps", ")", ":", "for", "step", "in", "raw_steps", ":", "if", "'start'", "in", "step", ":", "step", "[", "'start'", "]", "=", "parser", ".", "parse", "(", "step", "[", "'start'", "]", ")", "if", "'stop'",...	43.875	0.00838
def total_value(self): """ [float]总权益 """ return sum(account.total_value for account in six.itervalues(self._accounts))	[ "def", "total_value", "(", "self", ")", ":", "return", "sum", "(", "account", ".", "total_value", "for", "account", "in", "six", ".", "itervalues", "(", "self", ".", "_accounts", ")", ")" ]	29.4	0.019868
def clearAdvancedActions( self ): """ Clears out the advanced action map. """ self._advancedMap.clear() margins = list(self.getContentsMargins()) margins[2] = 0 self.setContentsMargins(*margins)	[ "def", "clearAdvancedActions", "(", "self", ")", ":", "self", ".", "_advancedMap", ".", "clear", "(", ")", "margins", "=", "list", "(", "self", ".", "getContentsMargins", "(", ")", ")", "margins", "[", "2", "]", "=", "0", "self", ".", "setContentsMargins...	31	0.023529
def scale(self, w=1.0, h=1.0): """Resizes the layer to the given width and height. When width w or height h is a floating-point number, scales percentual, otherwise scales to the given size in pixels. """ from types import FloatType w0, h0 = self....	[ "def", "scale", "(", "self", ",", "w", "=", "1.0", ",", "h", "=", "1.0", ")", ":", "from", "types", "import", "FloatType", "w0", ",", "h0", "=", "self", ".", "img", ".", "size", "if", "type", "(", "w", ")", "==", "FloatType", ":", "w", "=", "...	28.055556	0.019157
def is_local_port_open(port): """ Args: port (int): Returns: bool: References: http://stackoverflow.com/questions/7436801/identifying-listening-ports-using-python CommandLine: python -m utool.util_web is_local_port_open --show Example: >>> # DISABLE_DO...	[ "def", "is_local_port_open", "(", "port", ")", ":", "import", "socket", "s", "=", "socket", ".", "socket", "(", "socket", ".", "AF_INET", ",", "socket", ".", "SOCK_STREAM", ")", "result", "=", "s", ".", "connect_ex", "(", "(", "'127.0.0.1'", ",", "port",...	27.576923	0.001348
def compress(raw_data): """Compress raw bytes with the filepack algorithm. :param raw_data: an array of raw data bytes to compress :rtype: a list of compressed bytes """ raw_data = bytearray(raw_data) compressed_data = [] data_size = len(raw_data) index = 0 next_bytes = [-1, -1, ...	[ "def", "compress", "(", "raw_data", ")", ":", "raw_data", "=", "bytearray", "(", "raw_data", ")", "compressed_data", "=", "[", "]", "data_size", "=", "len", "(", "raw_data", ")", "index", "=", "0", "next_bytes", "=", "[", "-", "1", ",", "-", "1", ","...	30.107527	0.000346
def check_new_round(self, hours=24, tournament=1): """Check if a new round has started within the last `hours`. Args: hours (int, optional): timeframe to consider, defaults to 24 tournament (int): ID of the tournament (optional, defaults to 1) Returns: bool:...	[ "def", "check_new_round", "(", "self", ",", "hours", "=", "24", ",", "tournament", "=", "1", ")", ":", "query", "=", "'''\n query($tournament: Int!) {\n rounds(tournament: $tournament\n number: 0) {\n number\n ...	34.096774	0.00184
def from_params(cls, params): """Returns a list of MultipartParam objects from a sequence of name, value pairs, MultipartParam instances, or from a mapping of names to values The values may be strings or file objects, or MultipartParam objects. MultipartParam object names must m...	[ "def", "from_params", "(", "cls", ",", "params", ")", ":", "if", "hasattr", "(", "params", ",", "'items'", ")", ":", "params", "=", "params", ".", "items", "(", ")", "retval", "=", "[", "]", "for", "item", "in", "params", ":", "if", "isinstance", "...	37.882353	0.001514
def t_insert_dict_if_new(self, tblname, d, PKfields, fields=None): '''A version of insertDictIfNew for transactions. This does not call commit.''' SQL, values = self._insert_dict_if_new_inner(tblname, d, PKfields, fields=fields) if SQL != False: self.execute_select(SQL, parameters=va...	[ "def", "t_insert_dict_if_new", "(", "self", ",", "tblname", ",", "d", ",", "PKfields", ",", "fields", "=", "None", ")", ":", "SQL", ",", "values", "=", "self", ".", "_insert_dict_if_new_inner", "(", "tblname", ",", "d", ",", "PKfields", ",", "fields", "=...	55.428571	0.01269

def hybrid_meco_frequency(m1, m2, chi1, chi2, qm1=None, qm2=None): """Return the frequency of the hybrid MECO Parameters ---------- m1 : float Mass of the primary object in solar masses. m2 : float Mass of the secondary object in solar masses. chi1: float Dimensionless s...

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def find_files(directory, ext=None, recurse=True, case_sensitive=False, limit=None, offset=0): '''Get a sorted list of (audio) files in a directory or directory sub-tree. Examples -------- >>> # Get all audio files in a directory sub-tree >>> files = librosa.util.find_files('~/Music'...

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def get_configdir(): """Return string representing the configuration directory. Default is $HOME/.config/glymur. You can override this with the XDG_CONFIG_HOME environment variable. """ if 'XDG_CONFIG_HOME' in os.environ: return os.path.join(os.environ['XDG_CONFIG_HOME'], 'glymur') if...

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def get_files(directory, recursive=False): """Return a list of all files in the directory.""" files_out = [] if recursive: for root, dirs, files in os.walk(os.path.abspath(directory)): files = [os.path.join(root, f) for f in files] files_out.append(files) files_out = ...

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def get_fastq_files_props(self,barcode=None): """ Returns the DNAnexus file properties for all FASTQ files in the project that match the specified barcode, or all FASTQ files if not barcode is specified. Args: barcode: `str`. If set, then only FASTQ file properties for FA...

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def send_audio_file( self, audio_file, device_state, authentication_headers, dialog_request_id, distance_profile, audio_format ): """ Send audio to AVS The file-like object are steaming uploaded for improved latency. Returns: bytes -- wav audio bytes ret...

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def delete_cloud_integration(self, id, **kwargs): # noqa: E501 """Delete a specific cloud integration # noqa: E501 # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async_req=True >>> thread = api.delete_c...

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def nodes_touching_tile(tile_id): """ Get a list of node coordinates touching the given tile. :param tile_id: tile identifier, Tile.tile_id :return: list of node coordinates touching the given tile, list(int) """ coord = tile_id_to_coord(tile_id) nodes = [] for offset in _tile_node_offs...

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def _missing_values_set_to_nan(values, missing_value, sparse_missing): """ Return a copy of values where missing values (equal to missing_value) are replaced to nan according. If sparse_missing is True, entries missing in a sparse matrix will also be set to nan. Sparse matrices will be converted to dens...

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def updateBoostStrength(self): """ Update boost strength using given strength factor during training """ if self.training: self.boostStrength = self.boostStrength * self.boostStrengthFactor

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def _move_modules(self, temp_repo, destination): """Move odoo modules from the temp directory to the destination. This step is different from a standard repository. In the base code of Odoo, the modules are contained in a addons folder at the root of the git repository. However, when de...

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def convert(self, samplerate=None, n_channels=None, bitdepth=None): '''Converts output audio to the specified format. Parameters ---------- samplerate : float, default=None Desired samplerate. If None, defaults to the same as input. n_channels : int, default=None ...

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def mpraw_as_np(shape, dtype): """Construct a numpy array of the specified shape and dtype for which the underlying storage is a multiprocessing RawArray in shared memory. Parameters ---------- shape : tuple Shape of numpy array dtype : data-type Data type of array Returns ...

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def _password_digest(username, password): """Get a password digest to use for authentication. """ if not isinstance(password, basestring): raise TypeError("password must be an instance of basestring") if not isinstance(username, basestring): raise TypeError("username must be an instance ...

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def sendConnect(self, data): """Send a CONNECT command to the broker :param data: List of other broker main socket URL""" # Imported dynamically - Not used if only one broker if self.backend == 'ZMQ': import zmq self.context = zmq.Context() self.so...

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def parse(self, fo): """ Convert MEME output to motifs Parameters ---------- fo : file-like File object containing MEME output. Returns ------- motifs : list List of Motif instances. """ motifs = [] ...

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def write(parsed_obj, spec=None, filename=None): """Writes an object created by `parse` to either a file or a bytearray. If the object doesn't end on a byte boundary, zeroes are appended to it until it does. """ if not isinstance(parsed_obj, BreadStruct): raise ValueError( 'Obje...

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def y(self,*args,**kwargs): """ NAME: y PURPOSE: return y INPUT: t - (optional) time at which to get y (can be Quantity) ro= (Object-wide default) physical scale for distances to use to convert (can be Quantity) use_physical= ...

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def _multiseries(self, col, x, y, ctype, rsum, rmean): """ Chart multiple series from a column distinct values """ self.autoprint = False x, y = self._check_fields(x, y) chart = None series = self.split_(col) for key in series: instance = series[key] if rsum is not None: instance.rsum(rsum, in...

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def delete_directory(i): """ Input: { path - path to delete } Output: { return - return code = 0, if successful > 0, if error (error) - error text if return > 0 } """ import shu...

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def execute(self, request, target_route): """ :meth:`.WWebServiceProto.execute` method implementation """ presenter = self.create_presenter(request, target_route) presenter_name = target_route.presenter_name() action_name = target_route.presenter_action() presenter_args = target_route.presenter_args() if...

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def cmvnw(vec, win_size=301, variance_normalization=False): """ This function is aimed to perform local cepstral mean and variance normalization on a sliding window. The code assumes that there is one observation per row. Args: vec (array): input feature matrix (size:(num_observatio...

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def copy(self, keys = None): """ Return a copy of the segmentlistdict object. The return value is a new object with a new offsets attribute, with references to the original keys, and shallow copies of the segment lists. Modifications made to the offset dictionary or segmentlists in the object returned by ...

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def OauthGetAccessToken(self): """ Use token_verifier to obtain an access token for the user. If this function returns True, the clients __oauth_token__ member contains the access token. @return (boolean) - Boolean indicating whether OauthGetRequestToken wa...

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def extract_java_messages(): """ loop through java_*_0.out.txt and extract potentially dangerous WARN/ERRR/FATAL messages associated with a test. The test may even pass but something terrible has actually happened. :return: none """ global g_jenkins_url global g_failed_test_info_dict ...

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def inline_query(self): """The query ``str`` for :tl:`KeyboardButtonSwitchInline` objects.""" if isinstance(self.button, types.KeyboardButtonSwitchInline): return self.button.query

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def all_domain_events(self): """ Yields all domain events in the event store. """ for originator_id in self.record_manager.all_sequence_ids(): for domain_event in self.get_domain_events(originator_id=originator_id, page_size=100): yield domain_event

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def find_point_in_section_list(point, section_list): """Returns the start of the section the given point belongs to. The given list is assumed to contain start points of consecutive sections, except for the final point, assumed to be the end point of the last section. For example, the list [5, 8, 30, 3...

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def boundary_maximum_division(graph, xxx_todo_changeme5): r""" Boundary term processing adjacent voxels maximum value using a division relationship. An implementation of a boundary term, suitable to be used with the `~medpy.graphcut.generate.graph_from_voxels` function. The same as `bound...

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def findUiActions( widget ): """ Looks up actions for the inputed widget based on naming convention. :param widget | <QWidget> :return [<QAction>, ..] """ import_qt(globals()) output = [] for action in widget.findChildren(QtGui.QAction): name =...

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def range_per(self): """ Range percentage 計算最新日之漲跌幅度百分比 """ rp = float((self.raw_data[-1] - self.raw_data[-2]) / self.raw_data[-2] * 100) return rp

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def cut(self, sentence, cut_all=False, HMM=True): ''' The main function that segments an entire sentence that contains Chinese characters into separated words. Parameter: - sentence: The str(unicode) to be segmented. - cut_all: Model type. True for full pattern, ...

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def pickle_all(self, path): """Back up entire JSS to a Python Pickle. For each object type, retrieve all objects, and then pickle the entire smorgasbord. This will almost certainly take a long time! Pickling is Python's method for serializing/deserializing Python object...

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def Seek(self, offset, whence=os.SEEK_SET): """Moves the reading cursor.""" if whence == os.SEEK_SET: self._offset = offset elif whence == os.SEEK_CUR: self._offset += offset elif whence == os.SEEK_END: self._offset = self._length + offset else: raise ValueError("Invalid whe...

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def watch(self, filepath, func=None, delay=None, ignore=None): """Add the given filepath for watcher list. Once you have intialized a server, watch file changes before serve the server:: server.watch('static/*.stylus', 'make static') def alert(): print('...

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def index_humansorted(seq, key=None, reverse=False, alg=ns.DEFAULT): """ This is a wrapper around ``index_natsorted(seq, alg=ns.LOCALE)``. Parameters ---------- seq: iterable The input to sort. key: callable, optional A key used to determine how to sort each element of the sequ...

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def next(self, timeout=0): """Return empty unless new data is ready for the client. Arguments: timeout: Default timeout=0 range zero to float specifies a time-out as a floating point number in seconds. Will sit and wait for timeout seconds. When the timeout argument is omitted ...

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def CopyToDict(self): """Copies the attribute container to a dictionary. Returns: dict[str, object]: attribute values per name. """ dictionary = {} for attribute_name, attribute_value in self.GetAttributes(): if attribute_value is None: continue dictionary[attribute_name]...

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def get(path): ''' Get the content of the docker-compose file into a directory path Path where the docker-compose file is stored on the server CLI Example: .. code-block:: bash salt myminion dockercompose.get /path/where/docker-compose/stored ''' file_path = __get_docker_...

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def _values(self): """Getter for series values (flattened)""" return [abs(val) for val in super(Dot, self)._values if val != 0]

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def Clapeyron(T, Tc, Pc, dZ=1, Psat=101325): r'''Calculates enthalpy of vaporization at arbitrary temperatures using the Clapeyron equation. The enthalpy of vaporization is given by: .. math:: \Delta H_{vap} = RT \Delta Z \frac{\ln (P_c/Psat)}{(1-T_{r})} Parameters ---------- T : ...

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def reads_overlapping_variants(variants, samfile, **kwargs): """ Generates sequence of tuples, each containing a variant paired with a list of AlleleRead objects. Parameters ---------- variants : varcode.VariantCollection samfile : pysam.AlignmentFile use_duplicate_reads : bool ...

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def sum_transactions(transactions): """ Sums transactions into a total of remaining vacation days. """ workdays_per_year = 250 previous_date = None rate = 0 day_sum = 0 for transaction in transactions: date, action, value = _parse_transaction_entry(transaction) if previous_date i...

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def dropout_mask(x:Tensor, sz:Collection[int], p:float): "Return a dropout mask of the same type as `x`, size `sz`, with probability `p` to cancel an element." return x.new(*sz).bernoulli_(1-p).div_(1-p)

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def find_string_in_dict_or_list(i): """ Input: { dict - dictionary 1 (search_string) - search string (ignore_case) - ignore case of letters } Output: { return - return code = 0, if successful ...

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def _speak_as( self, element, regular_expression, data_property_value, operation ): """ Execute a operation by regular expression for element only. :param element: The element. :type element: hatemile.util.html.htmldomelement.HTMLDOMElement ...

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def generate_path_parameters_validator(api_path, path_parameters, context): """ Generates a validator function that given a path, validates that it against the path parameters """ path_parameter_validator = functools.partial( validate_path_parameters, api_path=api_path, path_...

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def form_invalid(self, post_form, attachment_formset, poll_option_formset, **kwargs): """ Processes invalid forms. """ poll_errors = [k for k in post_form.errors.keys() if k.startswith('poll_')] if ( poll_errors or ( poll_option_formset and ...

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def _xml_to_dict(xml): ''' Helper function to covert xml into a data dictionary. xml The xml data to convert. ''' dicts = {} for item in xml: key = item.tag.lower() idx = 1 while key in dicts: key += six.text_type(idx) idx += 1 if ...

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21.5

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def extract_citation_context(self, n_words=20): """Generate a dictionary of all bib keys in the document (and input documents), with rich of metadata about the context of each citation in the document. For example, suppose ``'Sick:2014'`` is cited twice within a document. Then t...

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40.461538

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def save_figure(self,event=None, transparent=True, dpi=600): """ save figure image to file""" if self.panel is not None: self.panel.save_figure(event=event, transparent=transparent, dpi=dpi)

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49.8

0.011858

def load(steps, reload=False): """ safely load steps in place, excluding those that fail Args: steps: the steps to load """ # work on collections by default for fewer isinstance() calls per call to load() if reload: _STEP_CACHE.clear() if callable(steps): steps = ste...

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def _default_pprint(obj, p, cycle): """ The default print function. Used if an object does not provide one and it's none of the builtin objects. """ klass = getattr(obj, '__class__', None) or type(obj) if getattr(klass, '__repr__', None) not in _baseclass_reprs: # A user-provided repr. ...

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def combine_results(self, results): """Combine results from different batches of filtering""" result = {} for key in results[0]: result[key] = numpy.concatenate([r[key] for r in results]) return result

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40

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def set_server(self, wsgi_app, fnc_serve=None): """ figures out how the wsgi application is to be served according to config """ self.set_wsgi_app(wsgi_app) ssl_config = self.get_config("ssl") ssl_context = {} if self.get_config("server") == "gevent": ...

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26.071429

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def _remove_curly_braces(text): """Remove everything in curly braces. Curly braces may be nested, so we keep track of depth. Args: text: a string Returns: a string """ current_pos = 0 depth = 0 ret = "" for match in re.finditer("[{}]", text): if depth == 0: ret += text[current_pos:...

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22.84

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def _api_decrypt(): ''' Return the response dictionary from the KMS decrypt API call. ''' kms = _kms() data_key = _cfg_data_key() try: return kms.decrypt(CiphertextBlob=data_key) except botocore.exceptions.ClientError as orig_exc: error_code = orig_exc.response.get('Error', {...

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38.666667

0.001684

def get_repo_info(repo_name, profile='github', ignore_cache=False): ''' Return information for a given repo. .. versionadded:: 2016.11.0 repo_name The name of the repository. profile The name of the profile configuration to use. Defaults to ``github``. CLI Example: .. co...

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def checkcache(filename=None): """Discard cache entries that are out of date. (This is not checked upon each call!)""" if filename is None: filenames = cache.keys() else: if filename in cache: filenames = [filename] else: return for filename in filen...

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def get_value(self, value): """ Replace variable names with placeholders (e.g. ':v1') """ next_key = ":v%d" % self._next_value self._next_value += 1 self._values[next_key] = value return next_key

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38.333333

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def effective_n(mcmc): """ Args: mcmc (MCMCResults): Pre-sliced MCMC samples to compute diagnostics for. """ if mcmc.n_chains < 2: raise ValueError( 'Calculation of effective sample size requires multiple chains ' 'of the same length.') def get_neff(x): ...

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36.614035

0.0014

def reset(self): """Reset metric counter.""" self._positions = [] self._line = 1 self._curr = None # current scope we are analyzing self._scope = 0 self.language = None

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def build_attrs(self, base_attrs, extra_attrs=None, **kwargs): """ Helper function for building an attribute dictionary. This is combination of the same method from Django<=1.10 and Django1.11+ """ attrs = dict(base_attrs, **kwargs) if extra_attrs: attrs.upda...

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34.7

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def _get_result_paths(self, data): """ Set the result paths """ # Swarm OTU map (mandatory output) return {'OtuMap': ResultPath(Path=self.Parameters['-o'].Value, IsWritten=True)}

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34.571429

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def get_operation_status(kwargs=None, conn=None, call=None): ''' .. versionadded:: 2015.8.0 Get Operation Status, based on a request ID CLI Example: .. code-block:: bash salt-cloud -f get_operation_status my-azure id=0123456789abcdef0123456789abcdef ''' if call != 'function': ...

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def main(func=None, argv=None, input_stream=stdin, output_stream=stdout, error_stream=stderr, exit=True): """runs a function as a command. runs a function as a command - reading input from `input_stream`, writing output into `output_stream` and providing arguments from `argv`. Example Usage: ...

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36.891892

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def summarize_ranges(array): """ :type array: List[int] :rtype: List[] """ res = [] if len(array) == 1: return [str(array[0])] i = 0 while i < len(array): num = array[i] while i + 1 < len(array) and array[i + 1] - array[i] == 1: i += 1 if array...

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def setModelData(self, editor, model, index): """ Updates the item with the new data value. :param editor | <QtGui.QWidget> model | <QtGui.QModel> index | <QtGui.QModelIndex> """ value = editor.currentText() ...

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35.5

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def parse_v3_signing_block(self): """ Parse the V2 signing block and extract all features """ self._v3_signing_data = [] # calling is_signed_v3 should also load the signature, if any if not self.is_signed_v3(): return block_bytes = self._v2_blocks[s...

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35.877551

0.001384

def vectorized_beta(dependents, independent, allowed_missing, out=None): """ Compute slopes of linear regressions between columns of ``dependents`` and ``independent``. Parameters ---------- dependents : np.array[N, M] Array with columns of data to be regressed against ``independent``. ...

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34.957447

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def uninitialize_ui(self): """ Uninitializes the Component ui. :return: Method success. :rtype: bool """ LOGGER.debug("> Uninitializing '{0}' Component ui.".format(self.__class__.__name__)) # Signals / Slots. self.Port_spinBox.valueChanged.disconnect(se...

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38.473684

0.008011

def get_sdr_data_helper(reserve_fn, get_fn, record_id, reservation_id=None): """Helper function to retrieve the sdr data using the specified functions. This can be used for SDRs from the Sensor Device or form the SDR repository. """ if reservation_id is None: reservation_id = reserve_f...

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29.192308

0.000637

def urlopen(self, method, url, body=None, headers=None, **kwargs): """Implementation of urllib3's urlopen.""" # pylint: disable=arguments-differ # We use kwargs to collect additional args that we don't need to # introspect here. However, we do explicitly collect the two # positio...

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def series2df(Series, layer=2, split_sign = '_'): """expect pass a series that each row is string formated Json data with the same structure""" try: Series.columns Series = Series.iloc[:,0] except: pass def _helper(x, layer=2): try: return flatten_dict(as...

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def _iter_avro_blocks(fo, header, codec, writer_schema, reader_schema): """Return iterator over avro blocks.""" sync_marker = header['sync'] read_block = BLOCK_READERS.get(codec) if not read_block: raise ValueError('Unrecognized codec: %r' % codec) while True: offset = fo.tell() ...

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def query_version(stream: aioxmpp.stream.StanzaStream, target: aioxmpp.JID) -> version_xso.Query: """ Query the software version of an entity. :param stream: A stanza stream to send the query on. :type stream: :class:`aioxmpp.stream.StanzaStream` :param target: The address of the ...

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def generate_basis(z): """ Generate an arbitrary basis (also known as a coordinate frame) from a given z-axis vector. Parameters ---------- z: (3,) float A vector along the positive z-axis Returns ------- x : (3,) float Vector along x axis y : (3,) float Vecto...

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def filter_mean(matrix, top): """Filter genes in an expression matrix by mean expression. Parameters ---------- matrix: ExpMatrix The expression matrix. top: int The number of genes to retain. Returns ------- ExpMatrix The filtered expression matrix. """ ...

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def p_expr_label(p): """ expr : ID """ p[0] = Expr.makenode(Container(MEMORY.get_label(p[1], p.lineno(1)), p.lineno(1)))

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def delete(self, ignore=None): """Yield tuple with deleted index name and responses from a client.""" ignore = ignore or [] def _delete(tree_or_filename, alias=None): """Delete indexes and aliases by walking DFS.""" if alias: yield alias, self.client.indi...

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def update(self, roomId, title=None, **request_parameters): """Update details for a room, by ID. Args: roomId(basestring): The room ID. title(basestring): A user-friendly name for the room. **request_parameters: Additional request parameters (provides ...

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def get_vaults_by_query(self, vault_query): """Gets a list of ``Vault`` objects matching the given search. arg: vault_query (osid.authorization.VaultQuery): the vault query return: (osid.authorization.VaultList) - the returned ``VaultList`` raise: Nul...

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def update(self, forecasts, observations): """ Update the statistics with forecasts and observations. Args: forecasts: The discrete Cumulative Distribution Functions of observations: """ if len(observations.shape) == 1: obs_cdfs = np.zeros((ob...

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def get_userlist(self): """ This collects all the users with open files on the system, and filters based on the variables user_include and user_exclude """ # convert user/group lists to arrays if strings if isinstance(self.config['user_include'], basestring): sel...

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def populateFromFile(self, dataUrl): """ Populates the instance variables of this FeatureSet from the specified data URL. """ self._dbFilePath = dataUrl self._db = Gff3DbBackend(self._dbFilePath)

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def loss_value(self, x_data, y_true, y_pred): """ Calculate a value of loss function """ y_pred = y_pred.view(-1, y_pred.size(2)) y_true = y_true.view(-1).to(torch.long) return F.nll_loss(y_pred, y_true)

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def _CaptureEnvironmentLabels(self): """Captures information about the environment, if possible.""" if 'labels' not in self.breakpoint: self.breakpoint['labels'] = {} if callable(breakpoint_labels_collector): for (key, value) in six.iteritems(breakpoint_labels_collector()): self.breakpo...

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def create_cud_from_task(task, placeholder_dict, prof=None): """ Purpose: Create a Compute Unit description based on the defined Task. :arguments: :task: EnTK Task object :placeholder_dict: dictionary holding the values for placeholders :return: ComputeUnitDescription """ try:...

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def show_distance_matrix(self): """! @brief Shows gray visualization of U-matrix (distance matrix). @see get_distance_matrix() """ distance_matrix = self.get_distance_matrix() plt.imshow(distance_matrix, cmap = plt.get_cmap('hot'), inte...

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def _get_postvalue_from_absoluteURI(url): """Bug [ 1513000 ] POST Request-URI not limited to "abs_path" Request-URI = "*" | absoluteURI | abs_path | authority Not a complete solution, but it seems to work with all known implementations. ValueError thrown if bad uri. """ cache = _get_postva...

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def IntegerMultiplication(left: vertex_constructor_param_types, right: vertex_constructor_param_types, label: Optional[str]=None) -> Vertex: """ Multiplies one vertex by another :param left: a vertex to be multiplied :param right: a vertex to be multiplied """ return Integer(context.jvm_vie...

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def _load_steps(self, raw_steps): """ load steps -> basically load all the datetime isoformats into datetimes """ for step in raw_steps: if 'start' in step: step['start'] = parser.parse(step['start']) if 'stop' in step: step['stop'] = parser.parse(...

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def total_value(self): """ [float]总权益 """ return sum(account.total_value for account in six.itervalues(self._accounts))

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def clearAdvancedActions( self ): """ Clears out the advanced action map. """ self._advancedMap.clear() margins = list(self.getContentsMargins()) margins[2] = 0 self.setContentsMargins(*margins)

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def scale(self, w=1.0, h=1.0): """Resizes the layer to the given width and height. When width w or height h is a floating-point number, scales percentual, otherwise scales to the given size in pixels. """ from types import FloatType w0, h0 = self....

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def is_local_port_open(port): """ Args: port (int): Returns: bool: References: http://stackoverflow.com/questions/7436801/identifying-listening-ports-using-python CommandLine: python -m utool.util_web is_local_port_open --show Example: >>> # DISABLE_DO...

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def compress(raw_data): """Compress raw bytes with the filepack algorithm. :param raw_data: an array of raw data bytes to compress :rtype: a list of compressed bytes """ raw_data = bytearray(raw_data) compressed_data = [] data_size = len(raw_data) index = 0 next_bytes = [-1, -1, ...

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def check_new_round(self, hours=24, tournament=1): """Check if a new round has started within the last `hours`. Args: hours (int, optional): timeframe to consider, defaults to 24 tournament (int): ID of the tournament (optional, defaults to 1) Returns: bool:...

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def from_params(cls, params): """Returns a list of MultipartParam objects from a sequence of name, value pairs, MultipartParam instances, or from a mapping of names to values The values may be strings or file objects, or MultipartParam objects. MultipartParam object names must m...

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def t_insert_dict_if_new(self, tblname, d, PKfields, fields=None): '''A version of insertDictIfNew for transactions. This does not call commit.''' SQL, values = self._insert_dict_if_new_inner(tblname, d, PKfields, fields=fields) if SQL != False: self.execute_select(SQL, parameters=va...

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