chrom stringclasses 12
values | pos int64 36.1k 249M | ref stringclasses 4
values | alt stringclasses 4
values | label bool 2
classes | subset stringclasses 8
values | match_group int64 0 2.16k | rsid stringlengths 3 15 | pip float64 0 1 | traits stringclasses 279
values | MAF float64 0 0.5 | ld_score float64 1.01 3.79k | consequence stringclasses 13
values | consequence_cre stringclasses 29
values | exon_closest_pc_gene_id stringlengths 15 15 | distance_exon_pc int64 0 1.68M | exon_closest_nc_gene_id stringlengths 15 15 | distance_exon_nc int64 0 507k | distance_exon int64 0 507k | exon_closest_gene_id stringlengths 15 15 | consequence_final stringclasses 28
values | tss_closest_pc_gene_id stringlengths 15 15 | distance_tss_pc int64 0 1.69M | tss_closest_nc_gene_id stringlengths 15 15 | distance_tss_nc int64 0 531k | distance_tss int64 0 531k | tss_closest_gene_id stringlengths 15 15 | consequence_group stringclasses 8
values | distance_tss_pc_bin stringclasses 4
values | distance_exon_pc_bin stringclasses 7
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
19 | 33,754,203 | C | A | false | distal | 1,075 | rs79273453 | 0.000287 | 0.096247 | 17.986 | intron_variant | dELS | ENSG00000124302 | 17,209 | ENSG00000124302 | 9,718 | 9,718 | ENSG00000124302 | dELS | ENSG00000153885 | 41,729 | ENSG00000153885 | 44,495 | 41,729 | ENSG00000153885 | distal | NA | NA | |
19 | 33,755,228 | G | A | false | distal | 1,074 | rs71351741 | 0.000533 | 0.10593 | 32.414 | intron_variant | dELS | ENSG00000124302 | 16,184 | ENSG00000124302 | 10,743 | 10,743 | ENSG00000124302 | dELS | ENSG00000153885 | 40,704 | ENSG00000153885 | 43,470 | 40,704 | ENSG00000153885 | distal | NA | NA | |
19 | 33,755,337 | G | A | false | distal | 1,074 | rs7246633 | 0.00047 | 0.16381 | 24.289 | intron_variant | dELS | ENSG00000124302 | 16,075 | ENSG00000124302 | 10,852 | 10,852 | ENSG00000124302 | dELS | ENSG00000153885 | 40,595 | ENSG00000153885 | 43,361 | 40,595 | ENSG00000153885 | distal | NA | NA | |
19 | 33,759,188 | G | A | false | distal | 1,074 | rs75533504 | 0.000279 | 0.16067 | 43.471 | intron_variant | dELS | ENSG00000124302 | 12,224 | ENSG00000124302 | 14,703 | 12,224 | ENSG00000124302 | dELS | ENSG00000153885 | 36,744 | ENSG00000153885 | 39,510 | 36,744 | ENSG00000153885 | distal | NA | NA | |
19 | 33,814,144 | C | T | false | 3_prime_UTR_variant | 1,115 | rs547027813 | 0.000314 | 0.006767 | 16.466 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000153885 | 0 | ENSG00000153885 | 0 | 0 | ENSG00000153885 | 3_prime_UTR_variant | ENSG00000153885 | 7,219 | ENSG00000153885 | 332 | 332 | ENSG00000153885 | 3_prime_UTR_variant | NA | NA | |
19 | 34,251,637 | T | C | false | distal | 1,120 | rs11668654 | 0.000302 | 0.22605 | 182.81 | intergenic_variant | CA-TF_flank | ENSG00000166398 | 2,914 | ENSG00000166398 | 2,959 | 2,914 | ENSG00000166398 | CA-TF_flank | ENSG00000166398 | 2,914 | ENSG00000166398 | 2,959 | 2,914 | ENSG00000166398 | distal | NA | NA | |
19 | 34,266,319 | A | C | false | tss_proximal | 1,065 | rs4805079 | 0.000342 | 0.22652 | 182.89 | intron_variant | dELS_flank | ENSG00000166398 | 11,704 | ENSG00000166398 | 697 | 697 | ENSG00000166398 | tss_proximal | ENSG00000166398 | 11,737 | ENSG00000166398 | 750 | 750 | ENSG00000166398 | tss_proximal | tss_prox:b2 | tss_prox:b2 | |
19 | 34,348,720 | G | A | false | non_coding_transcript_exon_variant | 981 | rs113875106 | 0.000254 | 0.042788 | 52.579 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000166398 | 295 | ENSG00000166398 | 0 | 0 | ENSG00000166398 | non_coding_transcript_exon_variant | ENSG00000105220 | 10,759 | ENSG00000166398 | 257 | 257 | ENSG00000166398 | non_coding_transcript_exon_variant | NA | NA | |
19 | 34,385,518 | G | T | false | distal | 1,046 | rs78770765 | 0.000067 | 0.043323 | 112.54 | intron_variant | dELS_flank | ENSG00000105220 | 3,998 | ENSG00000105220 | 3,919 | 3,919 | ENSG00000105220 | dELS_flank | ENSG00000266953 | 10,796 | ENSG00000105220 | 6,539 | 6,539 | ENSG00000105220 | distal | NA | NA | |
19 | 34,477,347 | T | C | false | distal | 1,121 | rs55840975 | 0.000099 | 0.10784 | 153.5 | intergenic_variant | CA-H3K4me3_flank | ENSG00000142279 | 4,410 | ENSG00000126261 | 8,230 | 4,410 | ENSG00000142279 | CA-H3K4me3_flank | ENSG00000142279 | 4,410 | ENSG00000126261 | 10,321 | 4,410 | ENSG00000142279 | distal | NA | NA | |
19 | 34,482,182 | G | A | false | missense_variant | 1,004 | rs150721734 | 0.003239 | 0.045065 | 31.022 | missense_variant | missense_variant | ENSG00000142279 | 0 | ENSG00000126261 | 13,065 | 0 | ENSG00000142279 | missense_variant | ENSG00000142279 | 345 | ENSG00000126261 | 15,156 | 345 | ENSG00000142279 | missense_variant | NA | NA | |
19 | 34,950,289 | G | T | false | non_coding_transcript_exon_variant | 979 | rs10401302 | 0.000055 | 0.46685 | 126.32 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000168661 | 5,118 | ENSG00000280106 | 0 | 0 | ENSG00000280106 | non_coding_transcript_exon_variant | ENSG00000180884 | 10,413 | ENSG00000280106 | 915 | 915 | ENSG00000280106 | non_coding_transcript_exon_variant | NA | NA | |
19 | 34,959,207 | C | T | false | synonymous_variant | 1,060 | rs35715851 | 0.000122 | 0.031248 | 29.797 | synonymous_variant | synonymous_variant | ENSG00000180884 | 0 | ENSG00000280106 | 8,001 | 0 | ENSG00000180884 | synonymous_variant | ENSG00000180884 | 1,495 | ENSG00000280106 | 8,001 | 1,495 | ENSG00000180884 | synonymous_variant | NA | NA | |
19 | 35,007,770 | G | A | false | distal | 1,122 | rs8102282 | 0.000101 | 0.095978 | 57.255 | intron_variant | TF | ENSG00000089351 | 1,348 | ENSG00000089351 | 1,348 | 1,348 | ENSG00000089351 | TF | ENSG00000089351 | 7,313 | ENSG00000089351 | 1,902 | 1,902 | ENSG00000089351 | distal | NA | NA | |
19 | 35,007,798 | G | A | false | distal | 1,122 | rs8102360 | 0.000101 | 0.095987 | 57.258 | intron_variant | TF | ENSG00000089351 | 1,320 | ENSG00000089351 | 1,320 | 1,320 | ENSG00000089351 | TF | ENSG00000089351 | 7,341 | ENSG00000089351 | 1,874 | 1,874 | ENSG00000089351 | distal | NA | NA | |
19 | 35,022,992 | C | T | false | tss_proximal | 1,093 | rs4806072 | 0.00022 | 0.468 | 66.394 | intron_variant | pELS_flank | ENSG00000089351 | 80 | ENSG00000089351 | 243 | 80 | ENSG00000089351 | tss_proximal | ENSG00000105711 | 7,477 | ENSG00000089351 | 305 | 305 | ENSG00000089351 | tss_proximal | tss_prox:b2 | tss_prox:b0 | |
19 | 35,033,920 | T | C | false | missense_variant | 1,026 | rs55742440 | 0.00224 | 0.35463 | 82.783 | missense_variant | missense_variant | ENSG00000105711 | 0 | ENSG00000105711 | 180 | 0 | ENSG00000105711 | missense_variant | ENSG00000105711 | 1,602 | ENSG00000105711 | 1,602 | 1,602 | ENSG00000105711 | missense_variant | NA | NA | |
19 | 35,046,802 | G | A | true | distal | 1,049 | rs41523449 | 0.99914 | CRP | 0.16532 | 36.92 | intron_variant | dELS_flank | ENSG00000105707 | 2,487 | ENSG00000227392 | 877 | 877 | ENSG00000227392 | dELS_flank | ENSG00000105707 | 5,035 | ENSG00000105707 | 2,468 | 2,468 | ENSG00000105707 | distal | NA | NA |
19 | 35,050,344 | T | G | true | distal | 1,122 | rs10406943 | 0.92243 | SHBG | 0.10094 | 43.751 | intron_variant | TF | ENSG00000105707 | 827 | ENSG00000105707 | 101 | 101 | ENSG00000105707 | TF | ENSG00000105707 | 8,577 | ENSG00000105707 | 1,027 | 1,027 | ENSG00000105707 | distal | NA | NA |
19 | 35,125,412 | C | T | false | missense_variant | 1,026 | rs12610234 | 0.003082 | 0.35266 | 66.323 | missense_variant | missense_variant | ENSG00000153902 | 0 | ENSG00000153902 | 0 | 0 | ENSG00000153902 | missense_variant | ENSG00000089356 | 6,048 | ENSG00000284065 | 2,711 | 2,711 | ENSG00000284065 | missense_variant | NA | NA | |
19 | 35,126,366 | T | C | false | missense_variant | 1,026 | rs1319969 | 0.002853 | 0.35324 | 66.216 | missense_variant | missense_variant | ENSG00000153902 | 0 | ENSG00000153902 | 0 | 0 | ENSG00000153902 | missense_variant | ENSG00000089356 | 7,002 | ENSG00000284065 | 3,665 | 3,665 | ENSG00000284065 | missense_variant | NA | NA | |
19 | 35,126,735 | C | G | false | missense_variant | 1,026 | rs1687998 | 0.002846 | 0.35286 | 66.347 | missense_variant | missense_variant | ENSG00000153902 | 0 | ENSG00000153902 | 0 | 0 | ENSG00000153902 | missense_variant | ENSG00000153902 | 7,005 | ENSG00000284065 | 4,034 | 4,034 | ENSG00000284065 | missense_variant | NA | NA | |
19 | 35,153,952 | T | C | false | 3_prime_UTR_variant | 1,108 | rs62111370 | 0.000172 | 0.17336 | 15.227 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000221946 | 0 | ENSG00000089327 | 794 | 0 | ENSG00000221946 | 3_prime_UTR_variant | ENSG00000089327 | 777 | ENSG00000089327 | 794 | 777 | ENSG00000089327 | 3_prime_UTR_variant | NA | NA | |
19 | 35,180,372 | C | T | false | distal | 1,045 | rs112344146 | 0.001906 | 0.31502 | 168.4 | intergenic_variant | dELS_flank | ENSG00000089327 | 10,490 | ENSG00000089327 | 10,491 | 10,490 | ENSG00000089327 | dELS_flank | ENSG00000089327 | 16,336 | ENSG00000089327 | 19,608 | 16,336 | ENSG00000089327 | distal | NA | NA | |
19 | 35,180,375 | A | C | false | distal | 1,045 | rs12983697 | 0.001918 | 0.31502 | 168.4 | intergenic_variant | dELS_flank | ENSG00000089327 | 10,493 | ENSG00000089327 | 10,494 | 10,493 | ENSG00000089327 | dELS_flank | ENSG00000089327 | 16,339 | ENSG00000089327 | 19,611 | 16,339 | ENSG00000089327 | distal | NA | NA | |
19 | 35,180,382 | A | G | false | distal | 1,045 | rs12983891 | 0.001912 | 0.31502 | 168.4 | intergenic_variant | dELS_flank | ENSG00000089327 | 10,500 | ENSG00000089327 | 10,501 | 10,500 | ENSG00000089327 | dELS_flank | ENSG00000089327 | 16,346 | ENSG00000089327 | 19,618 | 16,346 | ENSG00000089327 | distal | NA | NA | |
19 | 35,180,398 | C | T | false | distal | 1,045 | rs73596758 | 0.002099 | 0.31578 | 168.72 | intergenic_variant | dELS_flank | ENSG00000089327 | 10,516 | ENSG00000089327 | 10,517 | 10,516 | ENSG00000089327 | dELS_flank | ENSG00000089327 | 16,362 | ENSG00000089327 | 19,634 | 16,362 | ENSG00000089327 | distal | NA | NA | |
19 | 35,203,416 | A | G | false | distal | 1,085 | rs1633920 | 0.000836 | 0.44817 | 82.797 | intergenic_variant | dELS | ENSG00000177558 | 21,383 | ENSG00000262497 | 28,874 | 21,383 | ENSG00000177558 | dELS | ENSG00000177558 | 25,322 | ENSG00000262497 | 29,586 | 25,322 | ENSG00000177558 | distal | NA | NA | |
19 | 35,212,896 | C | T | false | distal | 1,073 | rs564541066 | 0.000115 | 0.0036 | 7.58 | intergenic_variant | dELS | ENSG00000177558 | 11,903 | ENSG00000262497 | 19,394 | 11,903 | ENSG00000177558 | dELS | ENSG00000177558 | 15,842 | ENSG00000262497 | 20,106 | 15,842 | ENSG00000177558 | distal | NA | NA | |
19 | 35,250,355 | C | T | false | missense_variant | 1,002 | rs141731488 | 0.003976 | 0.007382 | 7.3575 | missense_variant | missense_variant | ENSG00000105699 | 0 | ENSG00000105699 | 0 | 0 | ENSG00000105699 | missense_variant | ENSG00000105699 | 207 | ENSG00000105699 | 1,253 | 207 | ENSG00000105699 | missense_variant | NA | NA | |
19 | 35,299,742 | C | A | false | missense_variant | 1,028 | rs11084810 | 0.000064 | 0.000492 | 3.1001 | missense_variant | missense_variant | ENSG00000105695 | 0 | ENSG00000105695 | 10,063 | 0 | ENSG00000105695 | missense_variant | ENSG00000105695 | 7,580 | ENSG00000105695 | 10,063 | 7,580 | ENSG00000105695 | missense_variant | NA | NA | |
19 | 35,306,685 | G | T | false | distal | 1,054 | rs11879566 | 0.000162 | 0.18944 | 48.478 | intron_variant | dELS_flank | ENSG00000105695 | 3,188 | ENSG00000105695 | 3,120 | 3,120 | ENSG00000105695 | dELS_flank | ENSG00000012124 | 12,575 | ENSG00000105695 | 3,120 | 3,120 | ENSG00000105695 | distal | NA | NA | |
19 | 35,321,193 | G | A | true | distal | 1,050 | rs531034894 | 1 | Height | 0.00373 | 7.6883 | intron_variant | dELS_flank | ENSG00000012124 | 1,760 | ENSG00000012124 | 1,760 | 1,760 | ENSG00000012124 | dELS_flank | ENSG00000012124 | 1,931 | ENSG00000012124 | 1,821 | 1,821 | ENSG00000012124 | distal | NA | NA |
19 | 35,323,922 | G | C | false | distal | 1,071 | rs77670673 | 0.000046 | 0.11638 | 29.53 | intron_variant | dELS | ENSG00000012124 | 4,489 | ENSG00000012124 | 4,489 | 4,489 | ENSG00000012124 | dELS | ENSG00000012124 | 4,660 | ENSG00000012124 | 4,550 | 4,550 | ENSG00000012124 | distal | NA | NA | |
19 | 35,348,391 | G | T | false | 5_prime_UTR_variant | 1,099 | rs61396797 | 0.000845 | 0.021088 | 35.118 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000126266 | 0 | ENSG00000012124 | 1,124 | 0 | ENSG00000126266 | 5_prime_UTR_variant | ENSG00000126266 | 488 | ENSG00000284034 | 2,877 | 488 | ENSG00000126266 | 5_prime_UTR_variant | NA | NA | |
19 | 35,377,856 | A | G | false | distal | 1,077 | rs11883057 | 0.000051 | 0.1905 | 46.388 | intergenic_variant | dELS | ENSG00000126251 | 4,893 | ENSG00000268222 | 4,315 | 4,315 | ENSG00000268222 | dELS | ENSG00000126251 | 6,565 | ENSG00000268222 | 4,315 | 4,315 | ENSG00000268222 | distal | NA | NA | |
19 | 35,502,425 | C | T | false | tss_proximal | 985 | rs59551721 | 0.000117 | 0.23766 | 64.884 | intron_variant | pELS | ENSG00000161249 | 241 | ENSG00000161249 | 241 | 241 | ENSG00000161249 | tss_proximal | ENSG00000161249 | 513 | ENSG00000161249 | 412 | 412 | ENSG00000161249 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
19 | 35,511,491 | C | T | false | missense_variant | 1,024 | rs11667007 | 0.000132 | 0.16044 | 30.778 | missense_variant | missense_variant | ENSG00000161249 | 0 | ENSG00000161249 | 980 | 0 | ENSG00000161249 | missense_variant | ENSG00000161249 | 980 | ENSG00000161249 | 980 | 980 | ENSG00000161249 | missense_variant | NA | NA | |
19 | 35,527,746 | C | G | false | missense_variant | 1,035 | rs146976554 | 0.000574 | 0.022266 | 13.627 | missense_variant | missense_variant | ENSG00000189001 | 0 | ENSG00000105679 | 5,708 | 0 | ENSG00000189001 | missense_variant | ENSG00000189001 | 474 | ENSG00000105679 | 5,708 | 474 | ENSG00000189001 | missense_variant | NA | NA | |
19 | 35,628,428 | T | C | false | tss_proximal | 986 | rs56061409 | 0.000035 | 0.046957 | 27.099 | upstream_gene_variant | pELS | ENSG00000126254 | 601 | ENSG00000126254 | 662 | 601 | ENSG00000126254 | tss_proximal | ENSG00000126254 | 601 | ENSG00000126254 | 662 | 601 | ENSG00000126254 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
19 | 35,715,148 | A | C | false | missense_variant | 1,009 | rs2227278 | 0.000183 | 0.098056 | 148.03 | missense_variant | missense_variant | ENSG00000011590 | 0 | ENSG00000011590 | 0 | 0 | ENSG00000011590 | missense_variant | ENSG00000011590 | 2,219 | ENSG00000011590 | 1,714 | 1,714 | ENSG00000011590 | missense_variant | NA | NA | |
19 | 35,731,956 | C | T | false | missense_variant | 1,009 | rs16970649 | 0.000131 | 0.095654 | 147.14 | missense_variant | missense_variant | ENSG00000272333 | 0 | ENSG00000272333 | 0 | 0 | ENSG00000272333 | missense_variant | ENSG00000272333 | 1,613 | ENSG00000272333 | 287 | 287 | ENSG00000272333 | missense_variant | NA | NA | |
19 | 35,733,260 | C | A | false | synonymous_variant | 1,059 | rs112013670 | 0.000191 | 0.096643 | 145.92 | synonymous_variant | synonymous_variant | ENSG00000272333 | 0 | ENSG00000272333 | 0 | 0 | ENSG00000272333 | synonymous_variant | ENSG00000272333 | 502 | ENSG00000272333 | 502 | 502 | ENSG00000272333 | synonymous_variant | NA | NA | |
19 | 35,739,866 | A | G | false | missense_variant | 1,000 | rs34562867 | 0.000269 | 0.089047 | 146.19 | missense_variant | missense_variant | ENSG00000126246 | 0 | ENSG00000126246 | 0 | 0 | ENSG00000126246 | missense_variant | ENSG00000126246 | 682 | ENSG00000126246 | 729 | 682 | ENSG00000126246 | missense_variant | NA | NA | |
19 | 35,740,387 | C | T | false | missense_variant | 1,005 | rs140952221 | 0.003003 | 0.018714 | 36.92 | missense_variant | missense_variant | ENSG00000126246 | 0 | ENSG00000267120 | 0 | 0 | ENSG00000126246 | missense_variant | ENSG00000126246 | 161 | ENSG00000126246 | 208 | 161 | ENSG00000126246 | missense_variant | NA | NA | |
19 | 35,782,406 | G | A | false | synonymous_variant | 1,059 | rs35297478 | 0.000193 | 0.095589 | 133.95 | synonymous_variant | synonymous_variant | ENSG00000004777 | 0 | ENSG00000004777 | 0 | 0 | ENSG00000004777 | synonymous_variant | ENSG00000004777 | 32 | ENSG00000004777 | 66 | 32 | ENSG00000004777 | synonymous_variant | NA | NA | |
19 | 35,787,568 | C | G | false | synonymous_variant | 1,057 | rs231235 | 0.000728 | 0.386 | 116.2 | synonymous_variant | synonymous_variant | ENSG00000004777 | 0 | ENSG00000004777 | 817 | 0 | ENSG00000004777 | synonymous_variant | ENSG00000004777 | 5,194 | ENSG00000004777 | 2,660 | 2,660 | ENSG00000004777 | synonymous_variant | NA | NA | |
19 | 35,848,345 | C | T | false | missense_variant | 1,025 | rs33950747 | 0.000142 | 0.075489 | 37.271 | missense_variant | missense_variant | ENSG00000161270 | 0 | ENSG00000161270 | 0 | 0 | ENSG00000161270 | missense_variant | ENSG00000161270 | 3,492 | ENSG00000161270 | 648 | 648 | ENSG00000161270 | missense_variant | NA | NA | |
19 | 35,858,834 | G | C | false | synonymous_variant | 1,060 | rs34006827 | 0.000225 | 0.03291 | 192.01 | synonymous_variant | synonymous_variant | ENSG00000126259 | 0 | ENSG00000161270 | 7,161 | 0 | ENSG00000126259 | synonymous_variant | ENSG00000126259 | 1,727 | ENSG00000105290 | 9,728 | 1,727 | ENSG00000126259 | synonymous_variant | NA | NA | |
19 | 35,858,850 | G | A | false | missense_variant | 1,012 | rs404299 | 0.00019 | 0.033475 | 190.62 | missense_variant | missense_variant | ENSG00000126259 | 0 | ENSG00000161270 | 7,177 | 0 | ENSG00000126259 | missense_variant | ENSG00000126259 | 1,743 | ENSG00000105290 | 9,712 | 1,743 | ENSG00000126259 | missense_variant | NA | NA | |
19 | 35,861,122 | G | A | false | missense_variant | 1,012 | rs35423326 | 0.000283 | 0.032363 | 176.66 | missense_variant | missense_variant | ENSG00000126259 | 0 | ENSG00000161270 | 5,364 | 0 | ENSG00000126259 | missense_variant | ENSG00000126259 | 4,015 | ENSG00000105290 | 7,440 | 4,015 | ENSG00000126259 | missense_variant | NA | NA | |
19 | 35,907,512 | C | A | false | missense_variant | 1,001 | rs77782321 | 0.000098 | 0.008939 | 46.991 | missense_variant | missense_variant | ENSG00000011600 | 0 | ENSG00000011600 | 0 | 0 | ENSG00000011600 | missense_variant | ENSG00000011600 | 734 | ENSG00000011600 | 710 | 710 | ENSG00000011600 | missense_variant | NA | NA | |
19 | 35,939,563 | A | C | false | synonymous_variant | 1,063 | rs2242590 | 0.000205 | 0.033529 | 192.19 | synonymous_variant | synonymous_variant | ENSG00000126243 | 0 | ENSG00000126243 | 2,536 | 0 | ENSG00000126243 | synonymous_variant | ENSG00000126243 | 3,188 | ENSG00000126243 | 3,869 | 3,188 | ENSG00000126243 | synonymous_variant | NA | NA | |
19 | 35,939,896 | A | G | false | synonymous_variant | 1,063 | rs1057265 | 0.000213 | 0.033651 | 191.99 | synonymous_variant | synonymous_variant | ENSG00000126243 | 0 | ENSG00000126243 | 2,869 | 0 | ENSG00000126243 | synonymous_variant | ENSG00000126243 | 3,521 | ENSG00000126243 | 4,202 | 3,521 | ENSG00000126243 | synonymous_variant | NA | NA | |
19 | 35,956,122 | A | C | false | distal | 1,116 | rs1997537 | 0.000065 | 0.13796 | 33.072 | intron_variant | pELS | ENSG00000126243 | 9,497 | ENSG00000267113 | 998 | 998 | ENSG00000267113 | pELS | ENSG00000126243 | 19,747 | ENSG00000267113 | 1,259 | 1,259 | ENSG00000267113 | distal | NA | NA | |
19 | 36,048,849 | A | C | false | distal | 1,053 | rs182593961 | 0.000034 | 0.022791 | 27.274 | intron_variant | dELS_flank | ENSG00000161277 | 5,285 | ENSG00000267698 | 2,876 | 2,876 | ENSG00000267698 | dELS_flank | ENSG00000161277 | 5,435 | ENSG00000161277 | 5,527 | 5,435 | ENSG00000161277 | distal | NA | NA | |
19 | 36,055,113 | C | T | false | missense_variant | 1,005 | rs62109744 | 0.000057 | 0.018093 | 34.402 | missense_variant | missense_variant | ENSG00000075702 | 0 | ENSG00000075702 | 0 | 0 | ENSG00000075702 | missense_variant | ENSG00000075702 | 140 | ENSG00000075702 | 149 | 140 | ENSG00000075702 | missense_variant | NA | NA | |
19 | 36,090,361 | G | C | false | tss_proximal | 1,093 | rs3746271 | 0.001533 | 0.46165 | 119.65 | intron_variant | dELS_flank | ENSG00000075702 | 83 | ENSG00000075702 | 83 | 83 | ENSG00000075702 | tss_proximal | ENSG00000075702 | 2,327 | ENSG00000075702 | 142 | 142 | ENSG00000075702 | tss_proximal | tss_prox:b2 | tss_prox:b0 | |
19 | 36,091,368 | G | A | false | tss_proximal | 1,093 | rs2301736 | 0.001599 | 0.46164 | 119.63 | intron_variant | dELS_flank | ENSG00000075702 | 33 | ENSG00000075702 | 33 | 33 | ENSG00000075702 | tss_proximal | ENSG00000075702 | 1,320 | ENSG00000075702 | 863 | 863 | ENSG00000075702 | tss_proximal | tss_prox:b2 | tss_prox:b0 | |
19 | 36,100,529 | G | C | false | non_coding_transcript_exon_variant | 980 | rs17777328 | 0.000087 | 0.14643 | 114.22 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000075702 | 65 | ENSG00000075702 | 0 | 0 | ENSG00000075702 | non_coding_transcript_exon_variant | ENSG00000075702 | 65 | ENSG00000075702 | 196 | 65 | ENSG00000075702 | non_coding_transcript_exon_variant | NA | NA | |
19 | 36,103,161 | C | T | false | missense_variant | 1,009 | rs17851502 | 0.000026 | 0.10091 | 79.303 | missense_variant | missense_variant | ENSG00000075702 | 0 | ENSG00000075702 | 0 | 0 | ENSG00000075702 | missense_variant | ENSG00000075702 | 2,565 | ENSG00000075702 | 408 | 408 | ENSG00000075702 | missense_variant | NA | NA | |
19 | 36,103,757 | A | T | false | missense_variant | 1,033 | rs2074435 | 0.001185 | 0.39836 | 125.38 | missense_variant | missense_variant | ENSG00000075702 | 0 | ENSG00000075702 | 0 | 0 | ENSG00000075702 | missense_variant | ENSG00000075702 | 3,161 | ENSG00000075702 | 1,004 | 1,004 | ENSG00000075702 | missense_variant | NA | NA | |
19 | 36,140,738 | A | C | false | 5_prime_UTR_variant | 1,100 | rs17885022 | 0.000344 | 0.083089 | 34.915 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000126247 | 0 | ENSG00000126247 | 420 | 0 | ENSG00000126247 | 5_prime_UTR_variant | ENSG00000126247 | 129 | ENSG00000126247 | 420 | 129 | ENSG00000126247 | 5_prime_UTR_variant | NA | NA | |
19 | 36,492,297 | G | A | false | distal | 1,040 | rs149201186 | 0.000128 | 0.14093 | 314.73 | intergenic_variant | dELS_flank | ENSG00000186017 | 2,435 | ENSG00000267309 | 1,256 | 1,256 | ENSG00000267309 | dELS_flank | ENSG00000186017 | 2,435 | ENSG00000186017 | 2,394 | 2,394 | ENSG00000186017 | distal | NA | NA | |
19 | 36,687,445 | A | G | false | non_coding_transcript_exon_variant | 978 | rs7259256 | 0.002673 | 0.39489 | 361.84 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000189042 | 166 | ENSG00000225975 | 0 | 0 | ENSG00000225975 | non_coding_transcript_exon_variant | ENSG00000189042 | 166 | ENSG00000225975 | 3 | 3 | ENSG00000225975 | non_coding_transcript_exon_variant | NA | NA | |
19 | 36,747,856 | C | T | false | missense_variant | 1,027 | rs145117923 | 0.000127 | 0.001593 | 9.379 | missense_variant | missense_variant | ENSG00000267041 | 0 | ENSG00000189042 | 20,154 | 0 | ENSG00000267041 | missense_variant | ENSG00000267041 | 24,950 | ENSG00000267260 | 25,243 | 24,950 | ENSG00000267041 | missense_variant | NA | NA | |
19 | 36,748,551 | T | G | false | missense_variant | 1,027 | rs536931247 | 0.000113 | 0.000268 | 10.043 | missense_variant | missense_variant | ENSG00000267041 | 0 | ENSG00000189042 | 20,849 | 0 | ENSG00000267041 | missense_variant | ENSG00000267041 | 24,255 | ENSG00000267260 | 24,548 | 24,255 | ENSG00000267041 | missense_variant | NA | NA | |
19 | 36,748,768 | C | T | false | missense_variant | 1,027 | rs558699869 | 0.000016 | 0.000234 | 3.1855 | missense_variant | missense_variant | ENSG00000267041 | 0 | ENSG00000189042 | 21,066 | 0 | ENSG00000267041 | missense_variant | ENSG00000267041 | 24,038 | ENSG00000267260 | 24,331 | 24,038 | ENSG00000267041 | missense_variant | NA | NA | |
19 | 36,748,806 | A | G | false | missense_variant | 1,027 | rs140733551 | 0.000021 | 0.000024 | 17.815 | missense_variant | missense_variant | ENSG00000267041 | 0 | ENSG00000189042 | 21,104 | 0 | ENSG00000267041 | missense_variant | ENSG00000267041 | 24,000 | ENSG00000267260 | 24,293 | 24,000 | ENSG00000267041 | missense_variant | NA | NA | |
19 | 36,748,914 | G | T | false | missense_variant | 1,027 | rs61386433 | 0.000047 | 0.000099 | 274.38 | missense_variant | missense_variant | ENSG00000267041 | 0 | ENSG00000189042 | 21,212 | 0 | ENSG00000267041 | missense_variant | ENSG00000267041 | 23,892 | ENSG00000267260 | 24,185 | 23,892 | ENSG00000267041 | missense_variant | NA | NA | |
19 | 36,852,263 | G | A | false | tss_proximal | 993 | rs114101700 | 0.000033 | 0.007739 | 103.24 | intron_variant | PLS_flank | ENSG00000251247 | 358 | ENSG00000251247 | 358 | 358 | ENSG00000251247 | tss_proximal | ENSG00000251247 | 603 | ENSG00000251247 | 410 | 410 | ENSG00000251247 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
19 | 36,962,432 | T | C | false | distal | 1,085 | rs541966 | 0.000394 | 0.44748 | 718.47 | intron_variant | dELS | ENSG00000198453 | 9,688 | ENSG00000198453 | 28,620 | 9,688 | ENSG00000198453 | dELS | ENSG00000198453 | 10,780 | ENSG00000198453 | 28,620 | 10,780 | ENSG00000198453 | distal | NA | NA | |
19 | 36,962,486 | A | G | false | distal | 1,085 | rs542729 | 0.000409 | 0.44745 | 718.8 | intron_variant | dELS | ENSG00000198453 | 9,742 | ENSG00000198453 | 28,566 | 9,742 | ENSG00000198453 | dELS | ENSG00000198453 | 10,726 | ENSG00000198453 | 28,566 | 10,726 | ENSG00000198453 | distal | NA | NA | |
19 | 36,962,620 | T | C | false | distal | 1,085 | rs578977 | 0.000404 | 0.44744 | 718.8 | intron_variant | dELS | ENSG00000198453 | 9,876 | ENSG00000198453 | 28,432 | 9,876 | ENSG00000198453 | dELS | ENSG00000198453 | 10,592 | ENSG00000198453 | 28,432 | 10,592 | ENSG00000198453 | distal | NA | NA | |
19 | 37,137,502 | C | T | false | distal | 1,124 | rs7248132 | 0.000434 | 0.47556 | 724.08 | intron_variant | intron_variant | ENSG00000197050 | 7,133 | ENSG00000267437 | 3,637 | 3,637 | ENSG00000267437 | intron_variant | ENSG00000197050 | 9,334 | ENSG00000267437 | 4,137 | 4,137 | ENSG00000267437 | distal | NA | NA | |
19 | 37,138,189 | C | T | true | distal | 1,124 | rs12984458 | 1 | Height | 0.47566 | 724 | intron_variant | intron_variant | ENSG00000196967 | 7,350 | ENSG00000267437 | 3,404 | 3,404 | ENSG00000267437 | intron_variant | ENSG00000197050 | 10,021 | ENSG00000267437 | 3,450 | 3,450 | ENSG00000267437 | distal | NA | NA |
19 | 37,138,276 | C | T | false | distal | 1,124 | rs28528332 | 0.000461 | 0.47543 | 724.36 | intron_variant | intron_variant | ENSG00000196967 | 7,263 | ENSG00000267437 | 3,317 | 3,317 | ENSG00000267437 | intron_variant | ENSG00000197050 | 10,108 | ENSG00000267437 | 3,363 | 3,363 | ENSG00000267437 | distal | NA | NA | |
19 | 37,138,589 | A | G | false | distal | 1,124 | rs7252940 | 0.000441 | 0.47557 | 724.14 | intron_variant | intron_variant | ENSG00000196967 | 6,950 | ENSG00000267437 | 3,004 | 3,004 | ENSG00000267437 | intron_variant | ENSG00000197050 | 10,421 | ENSG00000267437 | 3,050 | 3,050 | ENSG00000267437 | distal | NA | NA | |
19 | 37,139,308 | T | C | false | distal | 1,124 | rs35579954 | 0.000439 | 0.47556 | 724.15 | intron_variant | intron_variant | ENSG00000196967 | 6,231 | ENSG00000267437 | 2,285 | 2,285 | ENSG00000267437 | intron_variant | ENSG00000197050 | 11,140 | ENSG00000267437 | 2,331 | 2,331 | ENSG00000267437 | distal | NA | NA | |
19 | 37,248,960 | A | G | false | distal | 1,126 | rs141071159 | 0.000275 | 0.004769 | 66.643 | intron_variant | intron_variant | ENSG00000188283 | 219 | ENSG00000226686 | 2,906 | 219 | ENSG00000188283 | intron_variant | ENSG00000188283 | 21,409 | ENSG00000226686 | 2,906 | 2,906 | ENSG00000226686 | distal | NA | NA | |
19 | 37,533,206 | C | G | false | tss_proximal | 987 | rs2279150 | 0.007859 | 0.15145 | 290.85 | intron_variant | intron_variant | ENSG00000188227 | 101 | ENSG00000188227 | 101 | 101 | ENSG00000188227 | tss_proximal | ENSG00000188227 | 842 | ENSG00000188227 | 101 | 101 | ENSG00000188227 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
19 | 37,533,369 | T | G | false | missense_variant | 1,025 | rs12977460 | 0.000465 | 0.084838 | 247.58 | missense_variant | missense_variant | ENSG00000188227 | 0 | ENSG00000188227 | 0 | 0 | ENSG00000188227 | missense_variant | ENSG00000188227 | 1,005 | ENSG00000188227 | 60 | 60 | ENSG00000188227 | missense_variant | NA | NA | |
19 | 37,538,150 | T | C | false | 3_prime_UTR_variant | 1,113 | rs192851002 | 0.000122 | 0.014116 | 54.521 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000188227 | 0 | ENSG00000188227 | 4,746 | 0 | ENSG00000188227 | 3_prime_UTR_variant | ENSG00000188227 | 5,786 | ENSG00000188227 | 4,841 | 4,841 | ENSG00000188227 | 3_prime_UTR_variant | NA | NA | |
19 | 37,538,157 | T | C | false | 3_prime_UTR_variant | 1,113 | rs185807394 | 0.000109 | 0.014069 | 54.394 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000188227 | 0 | ENSG00000188227 | 4,753 | 0 | ENSG00000188227 | 3_prime_UTR_variant | ENSG00000188227 | 5,793 | ENSG00000188227 | 4,848 | 4,848 | ENSG00000188227 | 3_prime_UTR_variant | NA | NA | |
19 | 37,538,210 | T | C | false | 3_prime_UTR_variant | 1,113 | rs113524934 | 0.001555 | 0.011824 | 61.319 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000188227 | 0 | ENSG00000188227 | 4,806 | 0 | ENSG00000188227 | 3_prime_UTR_variant | ENSG00000188227 | 5,846 | ENSG00000188227 | 4,901 | 4,901 | ENSG00000188227 | 3_prime_UTR_variant | NA | NA | |
19 | 37,586,760 | G | A | false | splicing | 1,132 | rs8111055 | 0.002666 | 0.20057 | 432.42 | splice_polypyrimidine_tract_variant | splice_polypyrimidine_tract_variant | ENSG00000180479 | 14 | ENSG00000267470 | 0 | 0 | ENSG00000267470 | splice_polypyrimidine_tract_variant | ENSG00000180479 | 2,603 | ENSG00000171817 | 8,115 | 2,603 | ENSG00000180479 | splicing | NA | splicing:b1 | |
19 | 37,678,012 | G | A | false | distal | 1,127 | rs2972448 | 0.001212 | 0.11916 | 368.92 | intron_variant | intron_variant | ENSG00000120784 | 13,508 | ENSG00000196381 | 610 | 610 | ENSG00000196381 | intron_variant | ENSG00000120784 | 14,324 | ENSG00000196381 | 1,618 | 1,618 | ENSG00000196381 | distal | NA | NA | |
19 | 37,678,454 | A | G | false | distal | 1,127 | rs2909109 | 0.001241 | 0.11898 | 369.94 | intron_variant | intron_variant | ENSG00000120784 | 13,066 | ENSG00000196381 | 168 | 168 | ENSG00000196381 | intron_variant | ENSG00000120784 | 13,882 | ENSG00000196381 | 2,060 | 2,060 | ENSG00000196381 | distal | NA | NA | |
19 | 37,739,025 | G | A | true | missense_variant | 1,016 | rs11666245 | 0.969745 | CRP | 0.046802 | 100.87 | missense_variant | missense_variant | ENSG00000189144 | 0 | ENSG00000189144 | 0 | 0 | ENSG00000189144 | missense_variant | ENSG00000198182 | 19,263 | ENSG00000189144 | 1,112 | 1,112 | ENSG00000189144 | missense_variant | NA | NA |
19 | 37,783,183 | T | C | false | distal | 1,125 | rs117489676 | 0.00006 | 0.011592 | 82.095 | intron_variant | intron_variant | ENSG00000189144 | 3,596 | ENSG00000267422 | 3,159 | 3,159 | ENSG00000267422 | intron_variant | ENSG00000189144 | 3,596 | ENSG00000189144 | 3,304 | 3,304 | ENSG00000189144 | distal | NA | NA | |
19 | 38,320,104 | C | G | true | missense_variant | 1,017 | rs142888784 | 0.99977 | Ca | 0.022478 | 36.668 | missense_variant | missense_variant | ENSG00000099337 | 0 | ENSG00000099337 | 138 | 0 | ENSG00000099337 | missense_variant | ENSG00000099337 | 258 | ENSG00000099337 | 138 | 138 | ENSG00000099337 | missense_variant | NA | NA |
19 | 38,326,988 | G | A | true | missense_variant | 1,018 | rs35496032 | 1 | Ca,P | 0.01355 | 33.329 | missense_variant | missense_variant | ENSG00000099337 | 0 | ENSG00000099337 | 1,498 | 0 | ENSG00000099337 | missense_variant | ENSG00000099337 | 7,142 | ENSG00000099337 | 6,744 | 6,744 | ENSG00000099337 | missense_variant | NA | NA |
19 | 38,327,236 | G | A | false | missense_variant | 1,023 | rs34989303 | 0.000617 | 0.14685 | 128.15 | missense_variant | missense_variant | ENSG00000099337 | 0 | ENSG00000099337 | 1,746 | 0 | ENSG00000099337 | missense_variant | ENSG00000099337 | 7,390 | ENSG00000099337 | 6,992 | 6,992 | ENSG00000099337 | missense_variant | NA | NA | |
19 | 38,337,320 | T | C | false | missense_variant | 1,024 | rs2302182 | 0.000869 | 0.15259 | 126.54 | missense_variant | missense_variant | ENSG00000099338 | 0 | ENSG00000099338 | 0 | 0 | ENSG00000099338 | missense_variant | ENSG00000099338 | 1,323 | ENSG00000099338 | 291 | 291 | ENSG00000099338 | missense_variant | NA | NA | |
19 | 38,385,712 | G | A | false | missense_variant | 1,007 | rs56854837 | 0.000166 | 0.044597 | 96.71 | missense_variant | missense_variant | ENSG00000179168 | 0 | ENSG00000267090 | 0 | 0 | ENSG00000179168 | missense_variant | ENSG00000179168 | 2,279 | ENSG00000267090 | 189 | 189 | ENSG00000267090 | missense_variant | NA | NA | |
19 | 38,385,824 | C | G | false | missense_variant | 1,009 | rs11083455 | 0.000188 | 0.096199 | 145.98 | missense_variant | missense_variant | ENSG00000179168 | 0 | ENSG00000179168 | 0 | 0 | ENSG00000179168 | missense_variant | ENSG00000179168 | 2,167 | ENSG00000267090 | 301 | 301 | ENSG00000267090 | missense_variant | NA | NA | |
19 | 38,386,615 | G | T | false | missense_variant | 1,001 | rs117848007 | 0.000508 | 0.009531 | 46.588 | missense_variant | missense_variant | ENSG00000179168 | 0 | ENSG00000179168 | 0 | 0 | ENSG00000179168 | missense_variant | ENSG00000179168 | 1,376 | ENSG00000267090 | 1,092 | 1,092 | ENSG00000267090 | missense_variant | NA | NA | |
19 | 38,386,669 | G | A | false | missense_variant | 1,030 | rs183879202 | 0.000037 | 0.008651 | 25.848 | missense_variant | missense_variant | ENSG00000179168 | 0 | ENSG00000179168 | 0 | 0 | ENSG00000179168 | missense_variant | ENSG00000179168 | 1,322 | ENSG00000267090 | 1,146 | 1,146 | ENSG00000267090 | missense_variant | NA | NA | |
19 | 38,403,192 | G | C | false | missense_variant | 1,008 | rs201469183 | 0.000037 | 0.007273 | 30.979 | missense_variant | missense_variant | ENSG00000130244 | 0 | ENSG00000130244 | 0 | 0 | ENSG00000130244 | missense_variant | ENSG00000130244 | 22 | ENSG00000130244 | 4 | 4 | ENSG00000130244 | missense_variant | NA | NA | |
19 | 38,403,284 | A | G | false | synonymous_variant | 1,059 | rs3745958 | 0.008147 | 0.095398 | 126.44 | synonymous_variant | synonymous_variant | ENSG00000130244 | 0 | ENSG00000130244 | 53 | 0 | ENSG00000130244 | synonymous_variant | ENSG00000130244 | 114 | ENSG00000130244 | 53 | 53 | ENSG00000130244 | synonymous_variant | NA | NA |
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