chrom stringclasses 12
values | pos int64 36.1k 249M | ref stringclasses 4
values | alt stringclasses 4
values | label bool 2
classes | subset stringclasses 8
values | match_group int64 0 2.16k | rsid stringlengths 3 15 | pip float64 0 1 | traits stringclasses 279
values | MAF float64 0 0.5 | ld_score float64 1.01 3.79k | consequence stringclasses 13
values | consequence_cre stringclasses 29
values | exon_closest_pc_gene_id stringlengths 15 15 | distance_exon_pc int64 0 1.68M | exon_closest_nc_gene_id stringlengths 15 15 | distance_exon_nc int64 0 507k | distance_exon int64 0 507k | exon_closest_gene_id stringlengths 15 15 | consequence_final stringclasses 28
values | tss_closest_pc_gene_id stringlengths 15 15 | distance_tss_pc int64 0 1.69M | tss_closest_nc_gene_id stringlengths 15 15 | distance_tss_nc int64 0 531k | distance_tss int64 0 531k | tss_closest_gene_id stringlengths 15 15 | consequence_group stringclasses 8
values | distance_tss_pc_bin stringclasses 4
values | distance_exon_pc_bin stringclasses 7
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 109,050,011 | C | G | false | distal | 20 | rs112857853 | 0.000164 | 0.045226 | 34.519 | intergenic_variant | dELS_flank | ENSG00000085433 | 7,897 | ENSG00000228054 | 2,528 | 2,528 | ENSG00000228054 | dELS_flank | ENSG00000085433 | 7,897 | ENSG00000228054 | 3,182 | 3,182 | ENSG00000228054 | distal | NA | NA | |
1 | 109,064,641 | A | G | false | missense_variant | 90 | rs183456650 | 0.000751 | 0.000223 | 2.7884 | missense_variant | missense_variant | ENSG00000197780 | 0 | ENSG00000228054 | 17,158 | 0 | ENSG00000197780 | missense_variant | ENSG00000197780 | 11,361 | ENSG00000228054 | 17,812 | 11,361 | ENSG00000197780 | missense_variant | NA | NA | |
1 | 109,221,302 | G | A | false | distal | 19 | rs1277928 | 0.000436 | 0.112 | 47.389 | intron_variant | dELS_flank | ENSG00000031698 | 2,675 | ENSG00000031698 | 2,675 | 2,675 | ENSG00000031698 | dELS_flank | ENSG00000031698 | 7,319 | ENSG00000031698 | 7,333 | 7,319 | ENSG00000031698 | distal | NA | NA | |
1 | 109,236,451 | G | A | false | missense_variant | 94 | rs140717526 | 0.000258 | 0.013617 | 18.23 | missense_variant | missense_variant | ENSG00000031698 | 0 | ENSG00000031698 | 0 | 0 | ENSG00000031698 | missense_variant | ENSG00000143126 | 13,087 | ENSG00000031698 | 219 | 219 | ENSG00000031698 | missense_variant | NA | NA | |
1 | 109,274,968 | G | T | true | 3_prime_UTR_variant | 132 | rs12740374 | 0.997445 | ApoB,LDLC | 0.22152 | 59.895 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000143126 | 0 | ENSG00000143126 | 0 | 0 | ENSG00000143126 | 3_prime_UTR_variant | ENSG00000134222 | 6,710 | ENSG00000143126 | 4,143 | 4,143 | ENSG00000143126 | 3_prime_UTR_variant | NA | NA |
1 | 109,293,597 | G | A | false | distal | 11 | rs11102968 | 0.000326 | 0.37448 | 58.138 | intron_variant | dELS_flank | ENSG00000221986 | 608 | ENSG00000221986 | 591 | 591 | ENSG00000221986 | dELS_flank | ENSG00000134222 | 10,410 | ENSG00000221986 | 2,755 | 2,755 | ENSG00000221986 | distal | NA | NA | |
1 | 109,293,840 | A | G | false | distal | 11 | rs1764833 | 0.00036 | 0.37551 | 58.404 | intron_variant | dELS_flank | ENSG00000221986 | 365 | ENSG00000221986 | 365 | 365 | ENSG00000221986 | dELS_flank | ENSG00000134222 | 10,653 | ENSG00000221986 | 2,512 | 2,512 | ENSG00000221986 | distal | NA | NA | |
1 | 109,427,099 | A | G | false | tss_proximal | 144 | rs4970754 | 0.000524 | 0.28589 | 249.65 | upstream_gene_variant | pELS | ENSG00000143106 | 650 | ENSG00000143106 | 671 | 650 | ENSG00000143106 | tss_proximal | ENSG00000143106 | 650 | ENSG00000143106 | 671 | 650 | ENSG00000143106 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
1 | 109,688,145 | G | A | false | 5_prime_UTR_variant | 129 | rs10857795 | 0.001453 | 0.07395 | 31.115 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000134184 | 0 | ENSG00000134184 | 24 | 0 | ENSG00000134184 | 5_prime_UTR_variant | ENSG00000134184 | 286 | ENSG00000134184 | 288 | 286 | ENSG00000134184 | 5_prime_UTR_variant | NA | NA | |
1 | 109,690,361 | A | G | true | missense_variant | 88 | rs140584594 | 1 | ALT,AST,ApoA,ApoB,HDLC,Mono,Plt,SHBG,TBil | 0.26935 | 32.278 | missense_variant | missense_variant | ENSG00000134184 | 0 | ENSG00000134184 | 1,035 | 0 | ENSG00000134184 | missense_variant | ENSG00000134184 | 2,502 | ENSG00000134184 | 2,504 | 2,502 | ENSG00000134184 | missense_variant | NA | NA |
1 | 109,759,883 | G | A | false | missense_variant | 108 | rs77854863 | 0.006725 | 0.064152 | 24.02 | missense_variant | missense_variant | ENSG00000198758 | 46 | ENSG00000198758 | 0 | 0 | ENSG00000198758 | missense_variant | ENSG00000198758 | 4,039 | ENSG00000198758 | 291 | 291 | ENSG00000198758 | missense_variant | NA | NA | |
1 | 109,766,112 | C | T | false | distal | 56 | rs76073921 | 0.000107 | 0.22141 | 57.727 | intron_variant | dELS | ENSG00000198758 | 2,084 | ENSG00000198758 | 2,188 | 2,084 | ENSG00000198758 | dELS | ENSG00000198758 | 2,084 | ENSG00000198758 | 2,188 | 2,084 | ENSG00000198758 | distal | NA | NA | |
1 | 109,766,378 | G | T | false | distal | 56 | rs75733477 | 0.000112 | 0.2215 | 57.722 | intron_variant | dELS | ENSG00000198758 | 2,350 | ENSG00000198758 | 2,454 | 2,350 | ENSG00000198758 | dELS | ENSG00000198758 | 2,350 | ENSG00000198758 | 2,454 | 2,350 | ENSG00000198758 | distal | NA | NA | |
1 | 109,928,142 | G | A | true | distal | 51 | rs333947 | 1 | AST,Alb,Lym,Mono,Plt,TP,WBC,eGFRcys | 0.14939 | 27.532 | intron_variant | dELS | ENSG00000184371 | 709 | ENSG00000184371 | 5,592 | 709 | ENSG00000184371 | dELS | ENSG00000184371 | 17,155 | ENSG00000184371 | 12,484 | 12,484 | ENSG00000184371 | distal | NA | NA |
1 | 109,934,644 | A | G | false | distal | 1 | rs12134543 | 0.000685 | 0.2022 | 51.686 | intergenic_variant | dELS_flank | ENSG00000184371 | 3,651 | ENSG00000184371 | 12,094 | 3,651 | ENSG00000184371 | dELS_flank | ENSG00000184371 | 23,657 | ENSG00000184371 | 18,986 | 18,986 | ENSG00000184371 | distal | NA | NA | |
1 | 109,936,181 | T | C | false | distal | 1 | rs6537885 | 0.002886 | 0.21664 | 39.328 | intergenic_variant | dELS_flank | ENSG00000184371 | 5,188 | ENSG00000184371 | 13,631 | 5,188 | ENSG00000184371 | dELS_flank | ENSG00000184371 | 25,194 | ENSG00000184371 | 20,523 | 20,523 | ENSG00000184371 | distal | NA | NA | |
1 | 109,965,679 | C | T | false | distal | 17 | rs181520088 | 0.002987 | 0.012432 | 11.356 | intergenic_variant | dELS_flank | ENSG00000168710 | 19,085 | ENSG00000168710 | 19,335 | 19,085 | ENSG00000168710 | dELS_flank | ENSG00000168710 | 19,085 | ENSG00000168710 | 19,335 | 19,085 | ENSG00000168710 | distal | NA | NA | |
1 | 110,070,303 | G | A | false | tss_proximal | 190 | rs2274568 | 0.005621 | 0.41895 | 88.015 | intron_variant | PLS_flank | ENSG00000156150 | 32 | ENSG00000143093 | 2,151 | 32 | ENSG00000156150 | tss_proximal | ENSG00000156150 | 368 | ENSG00000258634 | 11,962 | 368 | ENSG00000156150 | tss_proximal | tss_prox:b1 | tss_prox:b0 | |
1 | 110,199,880 | A | G | false | 3_prime_UTR_variant | 131 | rs2361044 | 0.00016 | 0.49343 | 59.758 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000197106 | 0 | ENSG00000197106 | 4,891 | 0 | ENSG00000197106 | 3_prime_UTR_variant | ENSG00000116396 | 10,433 | ENSG00000197106 | 7,311 | 7,311 | ENSG00000197106 | 3_prime_UTR_variant | NA | NA | |
1 | 110,199,993 | A | G | false | 3_prime_UTR_variant | 131 | rs12133992 | 0.000103 | 0.48874 | 60.07 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000197106 | 0 | ENSG00000197106 | 5,004 | 0 | ENSG00000197106 | 3_prime_UTR_variant | ENSG00000116396 | 10,320 | ENSG00000197106 | 7,424 | 7,424 | ENSG00000197106 | 3_prime_UTR_variant | NA | NA | |
1 | 110,223,832 | G | A | false | missense_variant | 83 | rs59123361 | 0.001072 | 0.10279 | 24.31 | missense_variant | missense_variant | ENSG00000116396 | 0 | ENSG00000116396 | 0 | 0 | ENSG00000116396 | missense_variant | ENSG00000116396 | 1 | ENSG00000116396 | 4,115 | 1 | ENSG00000116396 | missense_variant | NA | NA | |
1 | 110,381,731 | G | A | false | missense_variant | 103 | rs3738750 | 0.002919 | 0.17729 | 121.61 | missense_variant | missense_variant | ENSG00000168679 | 0 | ENSG00000168679 | 0 | 0 | ENSG00000168679 | missense_variant | ENSG00000168679 | 2,547 | ENSG00000224699 | 1,087 | 1,087 | ENSG00000224699 | missense_variant | NA | NA | |
1 | 110,456,232 | G | A | false | missense_variant | 92 | rs7514102 | 0.000395 | 0.41521 | 66.889 | missense_variant | missense_variant | ENSG00000143125 | 0 | ENSG00000270380 | 272 | 0 | ENSG00000143125 | missense_variant | ENSG00000143125 | 5,082 | ENSG00000270380 | 1,121 | 1,121 | ENSG00000270380 | missense_variant | NA | NA | |
1 | 110,606,367 | C | A | false | 5_prime_UTR_variant | 129 | rs3860224 | 0.000253 | 0.074752 | 85.246 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000177301 | 0 | ENSG00000177301 | 12 | 0 | ENSG00000177301 | 5_prime_UTR_variant | ENSG00000177301 | 8 | ENSG00000177301 | 12 | 8 | ENSG00000177301 | 5_prime_UTR_variant | NA | NA | |
1 | 110,607,794 | T | G | false | 5_prime_UTR_variant | 129 | rs4839537 | 0.000227 | 0.074364 | 85.976 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000177301 | 0 | ENSG00000177301 | 164 | 0 | ENSG00000177301 | 5_prime_UTR_variant | ENSG00000177301 | 21 | ENSG00000177301 | 164 | 21 | ENSG00000177301 | 5_prime_UTR_variant | NA | NA | |
1 | 110,813,313 | T | C | false | distal | 157 | rs343764 | 0.007193 | 0.24688 | 100.53 | intergenic_variant | intergenic_variant | ENSG00000143119 | 57,874 | ENSG00000237415 | 34,763 | 34,763 | ENSG00000237415 | intergenic_variant | ENSG00000143119 | 57,874 | ENSG00000237415 | 35,627 | 35,627 | ENSG00000237415 | distal | NA | NA | |
1 | 110,813,670 | C | T | false | distal | 157 | rs343765 | 0.000368 | 0.25748 | 144.34 | intergenic_variant | intergenic_variant | ENSG00000143119 | 57,517 | ENSG00000237415 | 34,406 | 34,406 | ENSG00000237415 | intergenic_variant | ENSG00000143119 | 57,517 | ENSG00000237415 | 35,270 | 35,270 | ENSG00000237415 | distal | NA | NA | |
1 | 110,861,433 | T | G | false | distal | 0 | rs6693583 | 0.001312 | 0.32384 | 175.2 | intergenic_variant | dELS_flank | ENSG00000143119 | 9,754 | ENSG00000232791 | 6,540 | 6,540 | ENSG00000232791 | dELS_flank | ENSG00000143119 | 9,754 | ENSG00000232791 | 7,493 | 7,493 | ENSG00000232791 | distal | NA | NA | |
1 | 111,027,945 | T | C | false | distal | 161 | rs4838885 | 0.000166 | 0.37792 | 108.59 | intergenic_variant | intergenic_variant | ENSG00000121931 | 63,979 | ENSG00000225672 | 12,414 | 12,414 | ENSG00000225672 | intergenic_variant | ENSG00000121931 | 63,979 | ENSG00000225672 | 12,414 | 12,414 | ENSG00000225672 | distal | NA | NA | |
1 | 111,028,092 | C | T | false | distal | 161 | rs56018148 | 0.000163 | 0.37783 | 108.61 | intergenic_variant | intergenic_variant | ENSG00000121931 | 64,126 | ENSG00000225672 | 12,561 | 12,561 | ENSG00000225672 | intergenic_variant | ENSG00000121931 | 64,126 | ENSG00000225672 | 12,561 | 12,561 | ENSG00000225672 | distal | NA | NA | |
1 | 111,041,068 | A | C | false | tss_proximal | 180 | rs60673371 | 0.000699 | 0.03055 | 126.06 | upstream_gene_variant | pELS_flank | ENSG00000156171 | 76,094 | ENSG00000252760 | 765 | 765 | ENSG00000252760 | tss_proximal | ENSG00000121931 | 77,102 | ENSG00000252760 | 765 | 765 | ENSG00000252760 | tss_proximal | tss_prox:b2 | tss_prox:b2 | |
1 | 111,197,723 | C | G | true | non_coding_transcript_exon_variant | 120 | rs599134 | 1 | HbA1c,Plt | 0.22484 | 29.677 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000162777 | 196 | ENSG00000162777 | 0 | 0 | ENSG00000162777 | non_coding_transcript_exon_variant | ENSG00000162777 | 2,922 | ENSG00000162777 | 2,397 | 2,397 | ENSG00000162777 | non_coding_transcript_exon_variant | NA | NA |
1 | 111,198,320 | G | A | false | distal | 55 | rs610261 | 0.000061 | 0.15374 | 14.186 | intron_variant | dELS | ENSG00000162777 | 309 | ENSG00000162777 | 309 | 309 | ENSG00000162777 | dELS | ENSG00000162777 | 2,325 | ENSG00000162777 | 1,800 | 1,800 | ENSG00000162777 | distal | NA | NA | |
1 | 111,200,846 | A | T | false | 5_prime_UTR_variant | 128 | rs17027081 | 0.000006 | 0.001076 | 93.58 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000064886 | 0 | ENSG00000162777 | 299 | 0 | ENSG00000064886 | 5_prime_UTR_variant | ENSG00000064886 | 74 | ENSG00000162777 | 299 | 74 | ENSG00000064886 | 5_prime_UTR_variant | NA | NA | |
1 | 111,242,504 | C | T | false | 3_prime_UTR_variant | 133 | rs6668814 | 0.000125 | 0.090588 | 56.78 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000064886 | 0 | ENSG00000064886 | 137 | 0 | ENSG00000064886 | 3_prime_UTR_variant | ENSG00000064886 | 3,576 | ENSG00000064886 | 3,197 | 3,197 | ENSG00000064886 | 3_prime_UTR_variant | NA | NA | |
1 | 111,319,352 | T | C | false | missense_variant | 101 | rs2275254 | 0.000081 | 0.41582 | 78.143 | missense_variant | missense_variant | ENSG00000134216 | 0 | ENSG00000134216 | 0 | 0 | ENSG00000134216 | missense_variant | ENSG00000134216 | 8,874 | ENSG00000232240 | 4,480 | 4,480 | ENSG00000232240 | missense_variant | NA | NA | |
1 | 111,450,201 | G | T | false | tss_proximal | 143 | rs1264898 | 0.000058 | 0.40884 | 130.2 | intron_variant | pELS | ENSG00000116459 | 327 | ENSG00000116459 | 327 | 327 | ENSG00000116459 | tss_proximal | ENSG00000116459 | 716 | ENSG00000116459 | 518 | 518 | ENSG00000116459 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
1 | 111,477,166 | A | G | false | distal | 40 | rs74109580 | 0.000098 | 0.024138 | 24.766 | intron_variant | dELS | ENSG00000143110 | 167 | ENSG00000143110 | 87 | 87 | ENSG00000143110 | dELS | ENSG00000143110 | 3,181 | ENSG00000143110 | 2,597 | 2,597 | ENSG00000143110 | distal | NA | NA | |
1 | 111,477,601 | C | A | false | distal | 40 | rs2298189 | 0.000084 | 0.021538 | 20.688 | intron_variant | dELS | ENSG00000143110 | 49 | ENSG00000143110 | 381 | 49 | ENSG00000143110 | dELS | ENSG00000143110 | 3,616 | ENSG00000143110 | 3,032 | 3,032 | ENSG00000143110 | distal | NA | NA | |
1 | 111,600,500 | G | A | false | distal | 44 | rs181978233 | 0.000034 | 0.001777 | 17.973 | intron_variant | dELS | ENSG00000116473 | 19,276 | ENSG00000231346 | 404 | 404 | ENSG00000231346 | dELS | ENSG00000116473 | 19,276 | ENSG00000231346 | 7,817 | 7,817 | ENSG00000231346 | distal | NA | NA | |
1 | 111,600,939 | C | T | false | distal | 44 | rs17028083 | 0.000364 | 0.00552 | 13.975 | intron_variant | dELS | ENSG00000116473 | 18,837 | ENSG00000231346 | 843 | 843 | ENSG00000231346 | dELS | ENSG00000116473 | 18,837 | ENSG00000231346 | 7,378 | 7,378 | ENSG00000231346 | distal | NA | NA | |
1 | 111,601,074 | A | G | false | distal | 44 | rs2800884 | 0 | 0.00089 | 9.0263 | intron_variant | dELS | ENSG00000116473 | 18,702 | ENSG00000231346 | 978 | 978 | ENSG00000231346 | dELS | ENSG00000116473 | 18,702 | ENSG00000231346 | 7,243 | 7,243 | ENSG00000231346 | distal | NA | NA | |
1 | 111,601,123 | T | C | false | distal | 44 | rs746769196 | 0.00011 | 0.001536 | 11.361 | intron_variant | dELS | ENSG00000116473 | 18,653 | ENSG00000231346 | 1,027 | 1,027 | ENSG00000231346 | dELS | ENSG00000116473 | 18,653 | ENSG00000231346 | 7,194 | 7,194 | ENSG00000231346 | distal | NA | NA | |
1 | 111,633,377 | A | G | false | distal | 9 | rs17028134 | 0.000236 | 0.056605 | 92.059 | intron_variant | dELS_flank | ENSG00000116473 | 5,813 | ENSG00000116473 | 5,817 | 5,813 | ENSG00000116473 | dELS_flank | ENSG00000116473 | 13,587 | ENSG00000116473 | 5,907 | 5,907 | ENSG00000116473 | distal | NA | NA | |
1 | 111,863,560 | T | G | false | distal | 53 | rs78216256 | 0.000097 | 0.045686 | 28.34 | intron_variant | dELS | ENSG00000171385 | 76,453 | ENSG00000232558 | 6,654 | 6,654 | ENSG00000232558 | dELS | ENSG00000064703 | 107,629 | ENSG00000232558 | 6,654 | 6,654 | ENSG00000232558 | distal | NA | NA | |
1 | 112,600,798 | T | C | false | missense_variant | 73 | rs116580400 | 0.000125 | 0.016435 | 16.29 | missense_variant | missense_variant | ENSG00000007341 | 0 | ENSG00000007341 | 0 | 0 | ENSG00000007341 | missense_variant | ENSG00000007341 | 10,107 | ENSG00000007341 | 10,163 | 10,107 | ENSG00000007341 | missense_variant | NA | NA | |
1 | 112,955,448 | G | C | false | 5_prime_UTR_variant | 125 | rs41283086 | 0.000226 | 0.012249 | 42.508 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000155380 | 0 | ENSG00000155380 | 0 | 0 | ENSG00000155380 | 5_prime_UTR_variant | ENSG00000155380 | 614 | ENSG00000155380 | 545 | 545 | ENSG00000155380 | 5_prime_UTR_variant | NA | NA | |
1 | 113,126,295 | A | C | false | 3_prime_UTR_variant | 134 | rs10494151 | 0.000072 | 0.046535 | 102.38 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000198799 | 0 | ENSG00000198799 | 0 | 0 | ENSG00000198799 | 3_prime_UTR_variant | ENSG00000198799 | 53,096 | ENSG00000237278 | 587 | 587 | ENSG00000237278 | 3_prime_UTR_variant | NA | NA | |
1 | 113,201,259 | G | A | false | distal | 23 | rs1819247 | 0.000297 | 0.49667 | 75.414 | intergenic_variant | dELS_flank | ENSG00000198799 | 68,998 | ENSG00000236887 | 2,000 | 2,000 | ENSG00000236887 | dELS_flank | ENSG00000198799 | 128,060 | ENSG00000236887 | 2,433 | 2,433 | ENSG00000236887 | distal | NA | NA | |
1 | 113,732,812 | T | C | false | distal | 167 | rs61817586 | 0.001012 | 0.30447 | 220.39 | intron_variant | CA_flank | ENSG00000116793 | 5,297 | ENSG00000116793 | 5,297 | 5,297 | ENSG00000116793 | CA_flank | ENSG00000116793 | 19,483 | ENSG00000116793 | 5,455 | 5,455 | ENSG00000116793 | distal | NA | NA | |
1 | 113,811,764 | G | T | false | missense_variant | 110 | rs200218368 | 0.000037 | 0.000663 | 8.9545 | missense_variant | missense_variant | ENSG00000081019 | 0 | ENSG00000081019 | 0 | 0 | ENSG00000081019 | missense_variant | ENSG00000081019 | 524 | ENSG00000081019 | 528 | 524 | ENSG00000081019 | missense_variant | NA | NA | |
1 | 113,811,803 | G | A | false | missense_variant | 72 | rs542480289 | 0.000109 | 0.004398 | 19.119 | missense_variant | missense_variant | ENSG00000081019 | 0 | ENSG00000081019 | 0 | 0 | ENSG00000081019 | missense_variant | ENSG00000081019 | 485 | ENSG00000081019 | 489 | 485 | ENSG00000081019 | missense_variant | NA | NA | |
1 | 113,834,946 | A | G | true | missense_variant | 89 | rs2476601 | 0.973905 | Lym,WBC | 0.10221 | 135.83 | missense_variant | missense_variant | ENSG00000134242 | 0 | ENSG00000134242 | 0 | 0 | ENSG00000134242 | missense_variant | ENSG00000081019 | 22,469 | ENSG00000231128 | 11,532 | 11,532 | ENSG00000231128 | missense_variant | NA | NA |
1 | 113,905,767 | C | T | false | missense_variant | 103 | rs11552449 | 0.00011 | 0.17475 | 193.06 | missense_variant | missense_variant | ENSG00000118655 | 0 | ENSG00000118655 | 0 | 0 | ENSG00000118655 | missense_variant | ENSG00000118655 | 440 | ENSG00000118655 | 357 | 357 | ENSG00000118655 | missense_variant | NA | NA | |
1 | 113,930,545 | A | G | false | 5_prime_UTR_variant | 127 | rs115843554 | 0.000657 | 0.011198 | 42.314 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000163349 | 0 | ENSG00000235527 | 1,049 | 0 | ENSG00000163349 | 5_prime_UTR_variant | ENSG00000163349 | 39 | ENSG00000235527 | 1,049 | 39 | ENSG00000163349 | 5_prime_UTR_variant | NA | NA | |
1 | 113,986,119 | G | C | false | distal | 45 | rs1806763 | 0.001474 | 0.12411 | 81.603 | intron_variant | dELS | ENSG00000116774 | 3,864 | ENSG00000116774 | 3,864 | 3,864 | ENSG00000116774 | dELS | ENSG00000116774 | 6,644 | ENSG00000116774 | 5,618 | 5,618 | ENSG00000116774 | distal | NA | NA | |
1 | 114,061,288 | A | G | false | distal | 189 | rs115625794 | 0.000034 | 0.008496 | 30.026 | intergenic_variant | CA-H3K4me3 | ENSG00000134207 | 28,003 | ENSG00000116774 | 25,715 | 25,715 | ENSG00000116774 | CA-H3K4me3 | ENSG00000116774 | 81,813 | ENSG00000282048 | 28,910 | 28,910 | ENSG00000282048 | distal | NA | NA | |
1 | 114,152,870 | C | G | false | 5_prime_UTR_variant | 127 | rs577009476 | 0.000036 | 0.009036 | 12.154 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000134207 | 0 | ENSG00000134207 | 739 | 0 | ENSG00000134207 | 5_prime_UTR_variant | ENSG00000134207 | 46 | ENSG00000134207 | 979 | 46 | ENSG00000134207 | 5_prime_UTR_variant | NA | NA | |
1 | 114,395,553 | C | T | false | 3_prime_UTR_variant | 134 | rs1125002 | 0.000039 | 0.046478 | 55.403 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000197323 | 0 | ENSG00000197323 | 704 | 0 | ENSG00000197323 | 3_prime_UTR_variant | ENSG00000197323 | 67,682 | ENSG00000197323 | 2,284 | 2,284 | ENSG00000197323 | 3_prime_UTR_variant | NA | NA | |
1 | 114,583,794 | C | T | false | 3_prime_UTR_variant | 135 | rs60576253 | 0.000162 | 0.049129 | 133.78 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000175984 | 0 | ENSG00000175984 | 191 | 0 | ENSG00000175984 | 3_prime_UTR_variant | ENSG00000116752 | 2,178 | ENSG00000116752 | 2,164 | 2,164 | ENSG00000116752 | 3_prime_UTR_variant | NA | NA | |
1 | 114,625,819 | T | G | false | missense_variant | 81 | rs61752477 | 0.000266 | 0.033082 | 400.87 | missense_variant | missense_variant | ENSG00000175984 | 0 | ENSG00000175984 | 0 | 0 | ENSG00000175984 | missense_variant | ENSG00000175984 | 373 | ENSG00000175984 | 493 | 373 | ENSG00000175984 | missense_variant | NA | NA | |
1 | 115,220,359 | G | C | false | distal | 5 | rs11808059 | 0.001338 | 0.062771 | 225.84 | intergenic_variant | dELS_flank | ENSG00000134259 | 65,544 | ENSG00000285698 | 50,407 | 50,407 | ENSG00000285698 | dELS_flank | ENSG00000134259 | 68,661 | ENSG00000228035 | 62,674 | 62,674 | ENSG00000228035 | distal | NA | NA | |
1 | 115,364,094 | A | C | false | tss_proximal | 176 | rs4144396 | 0.000019 | 0.46828 | 63.261 | intron_variant | pELS_flank | ENSG00000134259 | 25,323 | ENSG00000287103 | 508 | 508 | ENSG00000287103 | tss_proximal | ENSG00000134259 | 25,323 | ENSG00000287103 | 802 | 802 | ENSG00000287103 | tss_proximal | tss_prox:b2 | tss_prox:b2 | |
1 | 115,577,294 | A | G | false | non_coding_transcript_exon_variant | 119 | rs3017158 | 0.000117 | 0.05011 | 121.75 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000173218 | 64,675 | ENSG00000270631 | 0 | 0 | ENSG00000270631 | non_coding_transcript_exon_variant | ENSG00000173218 | 64,675 | ENSG00000270631 | 491 | 491 | ENSG00000270631 | non_coding_transcript_exon_variant | NA | NA | |
1 | 115,632,788 | G | C | false | distal | 27 | rs4424508 | 0.000033 | 0.23877 | 114.99 | intergenic_variant | dELS | ENSG00000173218 | 9,181 | ENSG00000207502 | 10,782 | 9,181 | ENSG00000173218 | dELS | ENSG00000173218 | 9,181 | ENSG00000207502 | 10,782 | 9,181 | ENSG00000173218 | distal | NA | NA | |
1 | 115,633,031 | C | T | false | distal | 27 | rs4839465 | 0.000033 | 0.23879 | 115.01 | intergenic_variant | dELS | ENSG00000173218 | 8,938 | ENSG00000207502 | 11,025 | 8,938 | ENSG00000173218 | dELS | ENSG00000173218 | 8,938 | ENSG00000207502 | 11,025 | 8,938 | ENSG00000173218 | distal | NA | NA | |
1 | 115,640,954 | G | C | false | distal | 150 | rs78503868 | 0.000052 | 0.059646 | 80.68 | intergenic_variant | pELS | ENSG00000173218 | 1,015 | ENSG00000207502 | 18,948 | 1,015 | ENSG00000173218 | pELS | ENSG00000173218 | 1,015 | ENSG00000207502 | 18,948 | 1,015 | ENSG00000173218 | distal | NA | NA | |
1 | 115,671,808 | C | T | false | tss_proximal | 175 | rs77797301 | 0.000062 | 0.049267 | 49.728 | intron_variant | dELS | ENSG00000173218 | 7,539 | ENSG00000173218 | 470 | 470 | ENSG00000173218 | tss_proximal | ENSG00000173218 | 20,405 | ENSG00000173218 | 663 | 663 | ENSG00000173218 | tss_proximal | tss_prox:b2 | tss_prox:b2 | |
1 | 115,791,152 | C | A | false | distal | 31 | rs12040622 | 0.000012 | 0.29879 | 95.086 | intergenic_variant | dELS | ENSG00000118729 | 22,437 | ENSG00000118729 | 58,224 | 22,437 | ENSG00000118729 | dELS | ENSG00000118729 | 22,437 | ENSG00000118729 | 58,224 | 22,437 | ENSG00000118729 | distal | NA | NA | |
1 | 115,791,195 | C | G | false | distal | 31 | rs12040653 | 0.000015 | 0.29482 | 97.053 | intergenic_variant | dELS | ENSG00000118729 | 22,480 | ENSG00000118729 | 58,267 | 22,480 | ENSG00000118729 | dELS | ENSG00000118729 | 22,480 | ENSG00000118729 | 58,267 | 22,480 | ENSG00000118729 | distal | NA | NA | |
1 | 115,791,973 | C | A | false | distal | 31 | rs4279854 | 0.000015 | 0.2947 | 96.989 | intergenic_variant | dELS | ENSG00000118729 | 23,258 | ENSG00000118729 | 59,045 | 23,258 | ENSG00000118729 | dELS | ENSG00000118729 | 23,258 | ENSG00000118729 | 59,045 | 23,258 | ENSG00000118729 | distal | NA | NA | |
1 | 115,792,085 | C | T | false | distal | 31 | rs4281325 | 0.000015 | 0.29472 | 96.985 | intergenic_variant | dELS | ENSG00000118729 | 23,370 | ENSG00000118729 | 59,157 | 23,370 | ENSG00000118729 | dELS | ENSG00000118729 | 23,370 | ENSG00000118729 | 59,157 | 23,370 | ENSG00000118729 | distal | NA | NA | |
1 | 115,814,031 | A | G | false | distal | 61 | rs2811582 | 0.000047 | 0.01553 | 65.074 | intergenic_variant | dELS | ENSG00000177551 | 22,345 | ENSG00000214204 | 42,878 | 22,345 | ENSG00000177551 | dELS | ENSG00000177551 | 26,709 | ENSG00000214204 | 43,787 | 26,709 | ENSG00000177551 | distal | NA | NA | |
1 | 116,297,935 | C | T | false | tss_proximal | 180 | rs114219961 | 0.000015 | 0.033423 | 13.971 | upstream_gene_variant | PLS_flank | ENSG00000163399 | 74,732 | ENSG00000287217 | 313 | 313 | ENSG00000287217 | tss_proximal | ENSG00000163399 | 74,732 | ENSG00000287217 | 313 | 313 | ENSG00000287217 | tss_proximal | tss_prox:b2 | tss_prox:b2 | |
1 | 116,354,024 | T | C | false | distal | 17 | rs10802185 | 0.000084 | 0.009764 | 96.437 | intergenic_variant | dELS_flank | ENSG00000163399 | 18,643 | ENSG00000163399 | 19,244 | 18,643 | ENSG00000163399 | dELS_flank | ENSG00000163399 | 18,643 | ENSG00000163399 | 19,244 | 18,643 | ENSG00000163399 | distal | NA | NA | |
1 | 116,696,121 | T | C | false | distal | 22 | rs573914192 | 0.000874 | 0.006202 | 10.617 | intron_variant | dELS_flank | ENSG00000143061 | 28,365 | ENSG00000203864 | 1,265 | 1,265 | ENSG00000203864 | dELS_flank | ENSG00000143061 | 28,365 | ENSG00000203864 | 2,008 | 2,008 | ENSG00000203864 | distal | NA | NA | |
1 | 117,001,709 | A | C | true | tss_proximal | 173 | rs12130298 | 0.999785 | Neutro,WBC | 0.076546 | 34.03 | upstream_gene_variant | PLS | ENSG00000134256 | 40 | ENSG00000134247 | 11,358 | 40 | ENSG00000134256 | tss_proximal | ENSG00000134256 | 40 | ENSG00000134247 | 14,668 | 40 | ENSG00000134256 | tss_proximal | tss_prox:b0 | tss_prox:b0 |
1 | 117,075,083 | A | G | false | missense_variant | 92 | rs998532 | 0.00029 | 0.40501 | 71.535 | missense_variant | missense_variant | ENSG00000116830 | 0 | ENSG00000116830 | 0 | 0 | ENSG00000116830 | missense_variant | ENSG00000116830 | 14,756 | ENSG00000116830 | 211 | 211 | ENSG00000116830 | missense_variant | NA | NA | |
1 | 117,113,466 | A | G | false | missense_variant | 92 | rs1289658 | 0.000236 | 0.41513 | 70.833 | missense_variant | missense_variant | ENSG00000134253 | 0 | ENSG00000134253 | 0 | 0 | ENSG00000134253 | missense_variant | ENSG00000134253 | 8,282 | ENSG00000134253 | 2,145 | 2,145 | ENSG00000134253 | missense_variant | NA | NA | |
1 | 117,487,590 | G | A | false | distal | 167 | rs3767799 | 0.00676 | 0.30665 | 197.39 | intron_variant | CA_flank | ENSG00000198162 | 5,556 | ENSG00000279513 | 5,924 | 5,556 | ENSG00000198162 | CA_flank | ENSG00000198162 | 9,189 | ENSG00000279513 | 5,924 | 5,924 | ENSG00000279513 | distal | NA | NA | |
1 | 117,596,431 | C | G | true | distal | 52 | rs320370 | 0.996815 | HbA1c | 0.35732 | 82.951 | downstream_gene_variant | dELS | ENSG00000183508 | 9,616 | ENSG00000236866 | 400 | 400 | ENSG00000236866 | dELS | ENSG00000183508 | 9,616 | ENSG00000236866 | 9,253 | 9,253 | ENSG00000236866 | distal | NA | NA |
1 | 117,622,914 | G | A | false | missense_variant | 90 | rs34495780 | 0.000034 | 0.000131 | 4.2998 | missense_variant | missense_variant | ENSG00000183508 | 0 | ENSG00000236866 | 17,143 | 0 | ENSG00000183508 | missense_variant | ENSG00000183508 | 16,865 | ENSG00000236866 | 17,143 | 16,865 | ENSG00000183508 | missense_variant | NA | NA | |
1 | 117,622,981 | G | A | true | missense_variant | 90 | rs148397151 | 0.999935 | MCH,MCV | 0.000547 | 5.3337 | missense_variant | missense_variant | ENSG00000183508 | 0 | ENSG00000236866 | 17,210 | 0 | ENSG00000183508 | missense_variant | ENSG00000183508 | 16,932 | ENSG00000236866 | 17,210 | 16,932 | ENSG00000183508 | missense_variant | NA | NA |
1 | 117,708,466 | G | T | true | distal | 53 | rs72695540 | 0.984985 | MCH | 0.031956 | 54.497 | intergenic_variant | dELS | ENSG00000183508 | 80,076 | ENSG00000270719 | 8,223 | 8,223 | ENSG00000270719 | dELS | ENSG00000183508 | 102,417 | ENSG00000270719 | 8,223 | 8,223 | ENSG00000270719 | distal | NA | NA |
1 | 117,708,521 | C | T | true | distal | 54 | rs10923397 | 0.99995 | HbA1c,MCHC,RBC | 0.16226 | 123.06 | intergenic_variant | dELS | ENSG00000183508 | 80,131 | ENSG00000270719 | 8,278 | 8,278 | ENSG00000270719 | dELS | ENSG00000183508 | 102,472 | ENSG00000270719 | 8,278 | 8,278 | ENSG00000270719 | distal | NA | NA |
1 | 117,939,526 | C | T | false | missense_variant | 89 | rs34973445 | 0.000038 | 0.08988 | 97.843 | missense_variant | missense_variant | ENSG00000065183 | 0 | ENSG00000065183 | 967 | 0 | ENSG00000065183 | missense_variant | ENSG00000065183 | 9,786 | ENSG00000065183 | 9,750 | 9,750 | ENSG00000065183 | missense_variant | NA | NA | |
1 | 117,969,966 | G | C | false | tss_proximal | 185 | rs11578577 | 0.000036 | 0.005672 | 21.202 | intron_variant | dELS_flank | ENSG00000155761 | 89 | ENSG00000155761 | 89 | 89 | ENSG00000155761 | tss_proximal | ENSG00000155761 | 38,103 | ENSG00000155761 | 151 | 151 | ENSG00000155761 | tss_proximal | tss_prox:b2 | tss_prox:b0 | |
1 | 117,970,183 | G | A | false | tss_proximal | 185 | rs190902205 | 0.000045 | 0.009696 | 27.122 | intron_variant | dELS_flank | ENSG00000155761 | 66 | ENSG00000155761 | 64 | 64 | ENSG00000155761 | tss_proximal | ENSG00000155761 | 37,886 | ENSG00000155761 | 64 | 64 | ENSG00000155761 | tss_proximal | tss_prox:b2 | tss_prox:b0 | |
1 | 118,884,844 | A | C | true | missense_variant | 91 | rs61730011 | 0.99977 | Height | 0.046058 | 105.83 | missense_variant | missense_variant | ENSG00000092607 | 0 | ENSG00000226172 | 115,499 | 0 | ENSG00000092607 | missense_variant | ENSG00000092607 | 29,280 | ENSG00000226172 | 116,547 | 29,280 | ENSG00000092607 | missense_variant | NA | NA |
1 | 118,885,064 | G | C | false | missense_variant | 91 | rs17022678 | 0.000217 | 0.000101 | 124.78 | missense_variant | missense_variant | ENSG00000092607 | 0 | ENSG00000226172 | 115,279 | 0 | ENSG00000092607 | missense_variant | ENSG00000092607 | 29,060 | ENSG00000226172 | 116,327 | 29,060 | ENSG00000092607 | missense_variant | NA | NA | |
1 | 118,885,216 | C | T | false | missense_variant | 91 | rs144291418 | 0.000086 | 0.000259 | 2.5545 | missense_variant | missense_variant | ENSG00000092607 | 0 | ENSG00000226172 | 115,127 | 0 | ENSG00000092607 | missense_variant | ENSG00000092607 | 28,908 | ENSG00000226172 | 116,175 | 28,908 | ENSG00000092607 | missense_variant | NA | NA | |
1 | 118,958,381 | G | C | false | distal | 61 | rs74668342 | 0.000045 | 0.018228 | 51.597 | intron_variant | dELS | ENSG00000092607 | 26,548 | ENSG00000226172 | 41,962 | 26,548 | ENSG00000092607 | dELS | ENSG00000092607 | 29,961 | ENSG00000226172 | 43,010 | 29,961 | ENSG00000092607 | distal | NA | NA | |
1 | 119,035,302 | G | A | false | distal | 170 | rs17185989 | 0.000048 | 0.12985 | 170.51 | intron_variant | CA-CTCF_flank | ENSG00000116874 | 1,088 | ENSG00000116874 | 1,088 | 1,088 | ENSG00000116874 | CA-CTCF_flank | ENSG00000092607 | 45,745 | ENSG00000224238 | 12,102 | 12,102 | ENSG00000224238 | distal | NA | NA | |
1 | 119,035,324 | C | G | false | distal | 170 | rs12132585 | 0.001118 | 0.13934 | 122.72 | intron_variant | CA-CTCF_flank | ENSG00000116874 | 1,110 | ENSG00000116874 | 1,110 | 1,110 | ENSG00000116874 | CA-CTCF_flank | ENSG00000092607 | 45,767 | ENSG00000224238 | 12,080 | 12,080 | ENSG00000224238 | distal | NA | NA | |
1 | 119,134,627 | C | T | false | distal | 62 | rs1341583 | 0.000126 | 0.39309 | 220 | intron_variant | dELS | ENSG00000116874 | 5,927 | ENSG00000116874 | 5,020 | 5,020 | ENSG00000116874 | dELS | ENSG00000116874 | 6,020 | ENSG00000231365 | 5,763 | 5,763 | ENSG00000231365 | distal | NA | NA | |
1 | 119,140,608 | A | C | false | missense_variant | 104 | rs139548132 | 0.000328 | 0.003589 | 9.2316 | missense_variant | missense_variant | ENSG00000116874 | 0 | ENSG00000231365 | 0 | 0 | ENSG00000116874 | missense_variant | ENSG00000116874 | 39 | ENSG00000116874 | 29 | 29 | ENSG00000116874 | missense_variant | NA | NA | |
1 | 119,220,531 | C | G | false | tss_proximal | 180 | rs76217211 | 0.000035 | 0.027853 | 69.388 | intron_variant | CA_flank | ENSG00000116874 | 79,877 | ENSG00000227056 | 434 | 434 | ENSG00000227056 | tss_proximal | ENSG00000116874 | 79,877 | ENSG00000227056 | 434 | 434 | ENSG00000227056 | tss_proximal | tss_prox:b2 | tss_prox:b2 | |
1 | 119,523,295 | G | A | false | distal | 159 | rs4579805 | 0.000307 | 0.32388 | 237.66 | intergenic_variant | intergenic_variant | ENSG00000203857 | 8,240 | ENSG00000226443 | 10,453 | 8,240 | ENSG00000203857 | intergenic_variant | ENSG00000203857 | 15,976 | ENSG00000226443 | 11,450 | 11,450 | ENSG00000226443 | distal | NA | NA | |
1 | 119,523,388 | C | T | false | distal | 159 | rs4478857 | 0.000272 | 0.32392 | 237.69 | intergenic_variant | intergenic_variant | ENSG00000203857 | 8,333 | ENSG00000226443 | 10,360 | 8,333 | ENSG00000203857 | intergenic_variant | ENSG00000203857 | 16,069 | ENSG00000226443 | 11,357 | 11,357 | ENSG00000226443 | distal | NA | NA | |
1 | 119,648,421 | A | T | true | 5_prime_UTR_variant | 126 | rs12129705 | 1 | Height | 0.12796 | 79.417 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000092621 | 0 | ENSG00000198857 | 39,170 | 0 | ENSG00000092621 | 5_prime_UTR_variant | ENSG00000092621 | 9 | ENSG00000198857 | 47,080 | 9 | ENSG00000092621 | 5_prime_UTR_variant | NA | NA |
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