id stringlengths 16 30 | sequence stringlengths 26 951 | secondary_structure stringlengths 26 951 | aligned_ids listlengths 2 10 | aligned_sequences listlengths 2 10 |
|---|---|---|---|---|
GL872207.1_22595-22680 | UGGCAGACUGACUGGAGCCGUAGAAAUAACUGUAACUGUCACUGACCAGUUGUCUGAAUAACAGGUCCGGGUCCGGUCUGCCGCCA | .(((((((((.(((((.((............(((((((........)))))))..........)))))))...))))))))).... | [
"GL872207.1/22595-22680",
"AE006471.2/80645-80560"
] | [
"UGGCAGACUGACUGGAGCCGUAGAAAUAACUGUAACUGUCACUGACCAGUUGUCUGAAUAACAGGUCCGGGUCCGGUCUGCCGCCA",
"UGGCUGACUGGCUGGAGCCAUAGAAAUAACUGUAACUGUCACUUACCAGUUCCCUGAAUAACAGGUCAGGGUCCGGCCUGCCCCCA"
] |
GU293728.1_349-438 | AAUGACUAUUAACUAUAUAUAAGAUAUUAAGACAAAAAGAAUCAUAAAUCUAACAAGGGGAUUAUGAUACAUCUAGUUGUAGUUGAUUUU | .......(((((((((..((.((((...............((.((...(((....)))..)).)).....)))).)).)))))))))... | [
"GU293728.1/349-438",
"CP002686.1/19219613-19219701",
"ADBK01000305.1/64465-64543"
] | [
"AAUGACUAUUAACUAUAUAUAAGAUAUUAAGACAAAAAGAAUCAUAAAUCUAACAAGGGGAUUAUGAUACAUCUAGUUGUAGUUGAUUUU",
"AAUGACUAUUAACUAU-UAUAAGAUAUUAAGACAAAAAGAAUAAUAAAUCUAACAAGGGGAUUAUGAUACAUCUAGUUGUAGUUGAUAUC",
"AAUGACU---AUAUUU-UAUAAGAUA-UAAGACAAAAAGAAUAAUAAAUCUAACAAGGGGAUUAUGAUACAUCUAGUUGAUA---GU---"
] |
HE574573.1_10177-10235 | GCUAGCGCAAGGAAGGAAAGUUGCAGACUACCUUGGGUGUUGACGACACUCCGCCCCCA | ....(((.....((((.(..........).))))((((((.....)))))))))..... | [
"HE574573.1/10177-10235",
"KC464457.1/10243-10301"
] | [
"GCUAGCGCAAGGAAGGAAAG------UUGCAGACUACCUUGGGUGUUGACGACACUCCGCCCCCA",
"UUCAGCGCAAGGAAGGAAAG------CUGGACGCUACCUUAGGUGGUGACGACACCUCGCCCCCA"
] |
HE574573.1_10405-10461 | CCACCCGCAAGGGGAGGGUUUUCUAACUCUCCGGGUGUUGACGACACCCCGGCCCCA | ....(((.....((((((........))))))((((((.....)))))))))..... | [
"HE574573.1/10405-10461",
"KX652375.1/10551-10607",
"MF582365.1/10405-10461"
] | [
"CCACCCGCAAGGGGAGGGUU------UUCUAA--CUCUCCGGGUGUUGACGACACCCCGGCCCCA",
"CCACCCGCAAGGGGGGAGUU------UUCUAA--CUCCCCGGGUGUUGACGACACCCCGGCCGCA",
"CCACCCGCAAGGGGGGAGAU------UUCCAA--CUCCCCGGGUGUUGACGACACCCCGGCCCCA"
] |
HE971709.1_5629384-5629480 | CCAAGUCCCGUCGCGAUAACCCCCCCCGGCGCCGGGACUCUCCCGAGCCGGGUCUCGGCGCCCUAACCCCCCCUGGGCGCCGGGGUCCGGCUCCUUU | ....((((((.(((..............))).))))))......(((((.((.((((((((((...........)))))))).)).))))))).... | [
"HE971709.1/5629384-5629480",
"AL645882.2/3510186-3510095",
"FN554889.1/5877015-5877107",
"CP013743.1/5887589-5887680"
] | [
"CCAAGUCCCGUCGCGAUAACCCCCCCCGGCGCCGGGACUCUCCC--GAGCCGGGUCU-CGGC-GCCCU-AACCCCCCCUGGGCGCCGGGGUCCGGCUCCUUU",
"CCACGUCCCGACGC----ACUCCCCCCGGCGCCGGGACU-UCCC--GAGCC-GGGCU-CGGCUGCCCC-UACCCCCCUGGGGCGCCGCAGCCCGGCUCCUUC",
"CCAAGUCCCGACGC----UCUCCCCCCAGCGCCGGGACU-CUCCGAGAGCC-GGGCCUCGGC-GCCUCCCCCCCCCCUGG--CGCCGAGGCCCGGCUUC... |
HG322950.1_5644547-5644253 | GAAAUUAUCGUCCUCGGCGGACAACAGGGCGUGAAUGAAGUCUGGGGGAAUGUCCGCGAAGCGAAUGGGCGUCCGGCGCAUCUCACCGAACUCUGCUAUCAAUUUGUUAUCACUGCUGUAAACGCGCAGCGGGAUCUGCAGCUGCACGUUACGCAGGGCGUCUACCGAGGGCAGGUUGGGACUGAGGUAGAGAUAAGCGCCGCUUAAACUGAGCAGCACUCCACAAAAUAUGGCGACGCAAGUCCACCACAGAAACUUCAGCAGGCGCAUUGGAAGGUCUUGGAUUUCCAGGGAA | .........((((((((.(((...(.((((.........)))).).((.(((.(..((..((......))...))..)))).)).(.(....).).......((((((.(....((((((.((.((...)).).).))))))...).)....))).))..))).))))))))...((((((.(..((.........((((((((.((.....((..(.(.(..........)).)..))...(.(......).)..)).))).)))))..........))...).)))))).... | [
"HG322950.1/5644547-5644253",
"AE004091.2/5681167-5680874",
"CP004143.1/5076814-5076520"
] | [
"GAAAUUAUCGUCCUCGGCGGACAACAGGGCGUGAAUGAAGUCUGGGGGAAUGUCCGCGAAGCGAAUGGGCGUCCGGCGCAUCUCACCGAACUCUGCUAUCAAUUUGUUAUCACUGCUGUAAACGCGCAGCGGGAUCUGCAGCUGCACGUUACGCAGGGCGUCUACCGAGGGCAGGUUGGGACUGAGGUAGAGAUAAGCGCCGCUUAAACUGAGCAGCACUCCACAAAAUAUGGCGACGCAAGUCCACCACAGAAACUUCAGCAGGCGCAUUGGAAGGUCUUGGAUUUCCAGGGAA",
"GAAAUUGUCGUCCU... |
HM488116.1_10695-10775 | CAAUGUCAGACCACGCUACGGACGUGGCUACGUCUAGGCGGAGAGUGGCAGGUCUGCGAUAGUGCCCCAGGAGGACUGGGU | ....(((((((.................(((.............)))....)))))..)).....(((((.....))))). | [
"HM488116.1/10695-10775",
"AY765264.1/10603-10676",
"GQ851605.1/10632-10702"
] | [
"CAAUGUCAGAC-----------------CACGCUA-CGG-ACGU-----GGCUACGUCUA-GGCGGAGAGUG----GCAG---GUCUGCGAU-----AGUGCCCC-AGGAGGACUGGGU",
"AGUUGUCAGAC-----------------CACACGC-AAG-UGUG-----CUACUCUGC-G-------AAGAG----UACU---GUCUGC-GUU----AGAGCCCC-AGGAGGACUGGGA",
"CACCGUCAGAC-----------------CACACCG-AGG-UGUG-----CCACUCAGC-G-----... |
HM488160.1_10500-10580 | GAAAGUCAGGCCGGGAAGUUCCCGCCACCGGAAGUUGAGUAGACGGUGCUGCCUGCGACUCAACCCCAAGGAGGACUGGGU | ....(((((((((((.....))))...(((.............)))....)))))..)).....(((.((.....))))). | [
"HM488160.1/10500-10580",
"AY765264.1/10442-10521",
"KT229574.1/10442-10521",
"AY277251.1/10451-10529",
"AY632545.2/10490-10570",
"JX236040.3/10489-10567"
] | [
"GAAAGUCAGGC-----------------CGGGAA--GUU-CCCG-C---C-ACCG-GAAGUUGAGUAGACGG----UGCU---GCCUGCGACU----CAA-CCCCAAGGAGGACUGGGU",
"AGAAGUCAGGC-----------------CAGC-UU-UAA-GCUG-----CCACCG-GAUGUCGAGUAGACGG----UGCU---GCCUGCAGCU----CU-UCCCC-AGGAGGACUGGGU",
"UGGAGUCAGGC-----------------CAGC--A-AAA-GCUG-----CCACCGGGAUACUGAG... |
JGZP01000022.1_25831-25917 | CGUAUCAUUGUGCCUCGCCUGCGCCGGAAGUCCCUAGGACAUCCCGCGGCCCGCGGGGCGAUAAGUCCGAAAGAGGGAUGAUAUGAC | (((((((((.(((((((((.((.......................)).)...))))))))......((......))))))))))).. | [
"JGZP01000022.1/25831-25917",
"JGYS01000022.1/135113-135034"
] | [
"CGUAUCAUUGUGCCUCGCC-UGCGCCGGAAGU-----CCCUAGGACAUCCCGCGGCCCGCGGGGCGAUAAGUCCGAAAGA--GGGAUGAUAUGAC",
"CGUAUCAUUGUGCCCCGCACUU-CCGGGCCCG-----AAGCG----GCCGCGUAU---GCGAGGCGAUAAGUCCGAAAGA--GGGAUGAUAUGAC"
] |
JMJF01000005.1_93013-92953 | ACUCAACCCAUGAAAGUAGACACCCCACCAUAAGGGGAUGAGCGAAAUCAUGGGUUUUUUG | ....(((((((((.....(.((.(((.......)))..))..)....)))))))))..... | [
"JMJF01000005.1/93013-92953",
"CP000253.1/386294-386353",
"LUGM01000002.1/900415-900473",
"AP023034.1/433520-433579"
] | [
"ACUCAACCCAUGAAAGUAGACACCCCACCAUAAGGGGAUGAGCGAAAUCAUGGGUUUUUUG",
"AACUGAUCCAUGAGAGUAGGAACCCCAUCAUACGGGAAUUU-CGAAAUCAUGGGUUUUUUG",
"AAUCCACCUAUGAGAGUAGGAACCCCACCAUAUGGGGAUUU-CGAAAUCAUAGGUUUUUG-",
"AACUGAUCCAUGAGAGUAGGAACCCCAUCAUACGGGAAUUU-CGAAAUCAUGGGUUUUUUG"
] |
JN409597.1_1-137 | CAAGCAGCAACAAGAAAGUGCUUAGGCUUAAAUGCGUUUACCUAAGCGCUGAUACAAUGCUGCCAGAACAAUUUUAAAGCCAAGAACAGUUUAGUUUAGAGUAGUUUAUAAACUGAUCUACACGUGGCCUAACAUAU | ...((((((.......((((((((((..((((....)))))))))))))).......))))))...............((((.....((.((((((((..........)))))))).)).....))))......... | [
"JN409597.1/1-137",
"AFPP01033382.1/28875-29010",
"AFFF01008313.1/400637-400772"
] | [
"CAAGCAGCAACAAGAAAGUGCUUAGGCUUAAAUGCGUUUACCUAAGCGCUGAUACAAUGCUGCCAGAACAAUUUUAAAGCCAAGAACAGUUUAGUUUAGAGUAGUUUAUAAACUGAUCUACACGUGGCCUAACAUAU",
"AUGGCAGCAACAAGAAAGUGCUUAGG-UUGAUUGAAUUUAUUUAAGCGCUGAUACAAUGCUGCCAGAACAAUUUAAAAGCCAAGAACAGUUCAGUUUAAUGGAGUUUAUAAACUGGUCUACACGUGUCCUUACAUUC",
"UUGGCAGCAACAAGAAAGUGCUUGAG-UU... |
JNCF01000027.1_24159-24414 | GAGAAUGUUGUUAAAGGCAGCAUCAGCGUUAGGGCAUAAAUUAAUGCUAAAGUACUGGAAAACAAUCUUUUAAUAACCAUAGCGAUCUCCUCGGAUCCAAGGCCAUGAAUCAGCCACUUUUUUGUAUUUUUUUAUAAUGCAAUUUAAGUGCCAGCGGCUAAACUUUUAAGACAACCACUCUAACGGAUUAACCGCUUUUCCUUUUUGUCUUAUCUCAAAGUAUAGACCGUUUUGCUUGAUUCCACCGCUGUGACCG | (((((.((.(((((.(((.(.(((.(.(....(((((......))))).(((.(.(.......).)..)))..................).).))).)...))).(((((.((((..((....((((((................)))))).)).)))).)...))))(((.......)))......))))).)))))))..(((((........))))).....(.((...((........)).)).)....... | [
"JNCF01000027.1/24159-24414",
"AE017354.1/539616-539866"
] | [
"GAGAAUGUUGUUAAAGGCAGCAUCAGCGUUAGGGCAUAAAUUAAUGCUAAAGUACUGGAAAACAAUCUUUUAAUAACCAUAGCGAUCUCCUCGGAUCCAAGGCCAUGAA-UCAGCCACUUUUUUGUAUUUUUUUAUAAUGCAAUUUAAGUGCCAGCGGCUAAACUUUUAAGACAACCACUCUAACGGAUUAACCGCUUUUCCUUUUUGUCUUAUCUCAAAGUAUAGACCGUUUUGCUUGAUUCCACCGCUGUGACCG",
"GAAAACGCGGUCAAAGGCAGCAUCAGAGUUAGGGCAUAAACCAAUGCCAAAG... |
JPME01000020.1_396-258 | AAAAUCAGGAAUAACAAAGUAGUUAUUUCUUGAGUUAUGUUACUGAUAAGCAGGCAGAACUCAGAUUCCAUAUUAAUCAGCCCAUUUUUACUGGGUUAAUUGGUAUGUAAUCUGAGUUUUUUUUCUUGAAAGGAGUACA | .((.(.(((((((((......)))))))))..).)).(((..((..(...(((..((((((((((((.((((((.....(((((.......))))).....)))))).)))))))))))).....)))..)..)).))) | [
"JPME01000020.1/396-258",
"MAPZ01000020.1/22816-22936",
"CP002109.1/2214456-2214318",
"JPME01000037.1/1-98"
] | [
"AAAAUCAGGAAUAACAAAGUAGUUAUUUCUUGAGUUAUGUUACUGAUAAGCAGGCAGAACUCAGAUUCCAUAUUAAUCAGCCCAUUUUUA-CUGGGUUAAUUGGUAUGUAAUCUGAGUUUUUUUUCUUGAA-AGGAGUACA--",
"AACU--AGUGGUAACAAAGCAGUUACUACUUG-AGUAUGUUACUGAUAAGCAGGCAGAACUCAGAUUACGUAGAA--------AAUGUCC---UUUU-----UCUACGUAGUCUGAGUUUUUUUUCUAGAA---AGGAGUAUU",
"AAACC-AGAAAUAACAA... |
JRKM01000001.1_1213986-1213865 | GCAACCUGAAGCUGGCGGCCGAGUACCCCAGCGUGUUCCGCUCGCUGCUGGGGAUUUCGUGGAUGUGGUUCUUUGGCGCGGUCUUCCUGUCGCAGUUCCCUGCGUUCGCCAAGGAGGUGCUG | .........(((.(..(((.((((((......)))))).)))..).))).((.((.((.(.((((.((..((.(((((.((....))))))).))..))...)))....).).)).)).)). | [
"JRKM01000001.1/1213986-1213865",
"CP000539.1/4119161-4119040",
"CP010951.1/1902359-1902238",
"CP000555.1/3947785-3947906"
] | [
"GCAACCUGAAGCUGGCGGCCGAGUACCCCAGCGUGUUCCGCUCGC-UGCUGGGGAUUUCGUGGAUGUGGUUCUUUGGCGCGGUCUUCCUGUCGCAGUUCCCUGCGUUCGCCAAGGAGGUGCUG",
"GCAACCUGAAGCUGGCGCACGGCAACACCGUGGUGUUCCGCUCGC-UGCUGGGCAUCUCGUGGAUGUGGUUCUUCGGCGCGGUGUUCCUGUCGCAGUUCCCCAGCUUCGCCAAGGACGUGCUG",
"GCAAUCUCAAGCUCGCGCACGGCAACGC-GGUGGUGUUCCGCUCGCUGCUGGGCAUC... |
JWZT01003725.1_9514-9429 | CGGCAUUCUGGCCUGAGCUGUAGAAGUAGCUGUAACUGUCGCCUAUCAUCUGGCUGAACAGCAGGUCCGGAUUCGGUUUGCCGCCA | .((((..((((((.((.((.............((..((........))..))...........)))).))..))))..)))).... | [
"JWZT01003725.1/9514-9429",
"CP000649.1/93894-93809"
] | [
"CGGCAUUCUGGCCUGAGCUGUAGAAGUAGCUGUAACUGUCGCCUAUCAUCUGGCUGAACAGCAGGUCCGGAUUCGGUUUGCCGCCA",
"CGGCGCUCUGUCCCGAGCUGUAGAAGUAAUUGUAGCUGUCGCCAAUCAUCUGGCUGAACAGCAGAUCGGGAUUAGGUUUGCCGCCA"
] |
JXKM01000007.1_155156-155413 | CUUUUUUACGCAUAAUAAACCACCUCUAUACAUUUUACUGUUCCUAUCCAAGUGGAAACAGGUAUAGAAAAACGUGUUAUGUAGUUUGUGAGUUCUUUUAAGAGCGCUAUUAUGCUUAUGAAUGUGAUAAAUCCAAUCUCAAAUAGAAAGGUCGCUGAUUUUAUUUACCCAUACAACUAUAUAAAAUUUAGUUAUGCUGCUAAAAAGUAGAUAAAAUUGGCGACUGAAUGGAGGUCACAGUCGCCAUGAAAAAGAUAC | .(.(..((..(.(((.(..........((((.((((.((((.(((.(..........).))).)))).)))).))))(............)....).))).).....))..).)............(((((..((((((.........))))...))..))))).....................................................(...((((.......))))...).................. | [
"JXKM01000007.1/155156-155413",
"CP019433.1/226380-226123"
] | [
"CUUUUUUACGCAUAAUAAACCACCUCUAUACAUUUUACUGUUCCUAUCCAAGUGGAAACAGGUAUAGAAAAACGUGUUAUGUAGUU-UGUGAGUUC-UUUUAAGAGCGCUAUU------AUGCU----UAUGAAUGUGAUAAAUCCA-AUCU-CAAAU----AGAA-AGGUCG-C-UGAUUUUAUUUACCCAUACAACUAUAUAAAAUUUAGUUAU-GCUGCUAAAAAGUAGAUAAAAUUGGCGACUG-AAU------GGAGGUCACAGUCGCC--AUGAAAAAGAUAC",
"CUUUUUUACGCAUAAUAAAC... |
JXNU01000003.1_3715356-3715443 | GCCGUACACACUACACGUUCCUUGCUUCCAUGGGCUCGCGGCUGACCCUGACAGGAGGCUGAAUAAUCCGUAAGGAGCAAAUUCGAUG | ................(((((((((((((..(((...........))).....))))))............))))))).......... | [
"JXNU01000003.1/3715356-3715443",
"U00096.3/4425036-4425120",
"FN543502.1/3436271-3436355",
"CP000880.1/3147309-3147225",
"CP000783.1/183478-183563",
"CP001600.2/428412-428497",
"CP002038.1/3924123-3924038",
"CP011254.1/2336794-2336877",
"AL590842.1/3949426-3949340",
"JMPN01000019.1/92947-92862"
] | [
"GCCG-UACACACUA-CACGUUCCUUGCUUCCAUGGGCUCGCGGCUGACCCUGACAGGAGGCUGAAUAAUCCGUAAGGAGCAAA-UUCGAUG",
"GCCG--ACCUUUAA-CACGUUCCUUGCCUCCCCGGGA-UUCGGCUGACCCAGACAGGAGGCUGAAUAAUCCGUAAGGAGCAAU--UCGAUG",
"GCCG--ACCUUUAA-CACGUUCCUUGCCUCCCCGGGC-CUCGGCUGACCCAGACAGGAGGCUGAAUAAUCCGUAAGGAGCAAU--UCGAUG",
"GCCG--ACCUUUAA-CACGUUCCU... |
KB946316.1_1298052-1298174 | GAAGAACUGUAGGGACUACAGGGAUAGCCUAGGGCAUAUAAGAUAGAUAUAGCGUUUAGUCGAUCAUUUGUCUUUUUCUAGGAAAUUUCUAGUUAAAUAGAGAUAGUUCACUAAUUAUUAGUU | ......((((((...)))))).(((..(((((((...(((((.......(((...)))........)))))....))))))).........))).....(((....))).............. | [
"KB946316.1/1298052-1298174",
"MIJY01000010.1/22225-22104"
] | [
"GAAGAACUGUAGGGACUACAGGGAUAGCCUAGGGCAUAUAAGAUAGAUAUAGCGUUUAGUCGAUCAUUUGUCUUUUUCUAGGAAAUUUCUAGUUAAAUAGAGAUAGUUCACUAAUUAUUAGUU",
"AAAGAACUGUAGGGACUACAGGGUUAGCCUAGGGUAUAUAAGAUAGAUAUAGCGUUGAUUCGAUCAUUUGUCUUUUUCUAGGAAAUU-UCUAUUAAAUAGAAAUAGUUCACUAAUUAUUAGUU"
] |
KB946329.1_666494-666405 | AACCAAAAACAACCUUUUUAUUUUUCAUUUUACUCUUUUUAGAGUAAUUACUCCUUUUUCCAUCGGCCUAACCAACCGAUGGUUUUUUUA | .............................((((((......))))))............(((((((..(....).)))))))........ | [
"KB946329.1/666494-666405",
"MIJY01000023.1/316870-316956",
"AP012200.1/940440-940528",
"AE016830.1/1876680-1876594"
] | [
"AACCAAAAACAACCUUUUUAUUUUUCAUUUUACUCUU-UUUAGAGUAAUUACUCCUUUUUCCAUCGGCCUAAC-C-AACCGAUGGUUUUUUUA",
"UACCAACAACAACCUUUUUAUUUUUCAUUUUACUCUU-AUU-GAGUAA-UACUCCUU-UUCCAUCGGU-CAAU-UAGGCCGGUGGUUUUUUUG",
"UACCAACAACAACCUUUUUAUUUUUCAAUUUACUCUGAAUA-GGGUAAAUACUCCUU-UUCCACCGGU-AAUUGA-UACCGGUGGUUUUUUUG",
"UACCAACAACAACCUUUU... |
KC836877.1_1151-1409 | UUGCUCGGCAACGGCCUGGUCUGUGCCAAGUGUUUGCUGACGCAACCCCCACUGGCUGGGGCUUGGCCAUAGGCCAUCAGCGCAUGCGUGGAACCUUUGUGGCUCCUCUGCCGAUCCAUACUGCGGAACUCCUAGCCGCUUGUUUUGCUCGCAGCCGGUCUGGAGCAAAGCUCAUCGGAACUGACAAUUCUGUCGUCCUCUCGCGGAAAUAUACAUCGUUUCCAUGGCUGCUAGGCUGUACUGCCAACUGGAUCCUUCG | (((((((((((..((.((((....)))).))..))))))).))))...((((..((..(.((((((((...)))))..))).)..)))))).........(((......)))((((((....((((.((.((((((.(((.(((((((((.(((.....)))))))))))).....(((..(((((....))))))))......((((((.......))))))..))).))))))..)).))))....))))))..... | [
"KC836877.1/1151-1409",
"M57663.2/1151-1409"
] | [
"UUGCUCGGCAACGGCCUGGUCUGUGCCAAGUGUUUGCUGACGCAACCCCCACUGGCUGGGGCUUGGCCAUAGGCCAUCAGCGCAUGCGUGGAACCUUUGUGGCUCCUCUGCCGAUCCAUACUGCGGAACUCCUAGCCGCUUGUUUUGCUCGCAGCCGGUCUGGAGCAAAGCUCAUCGGAACUGACAAUUCUGUCGUCCUCUCGCGGAAAUAUACAUCGUUUCCAUGGCUGCUAGGCUGUACUGCCAACUGGAUCCUUCG",
"UUGCCCGGCAACGGCCUGGUCUGUGCCAAGUGUUUGCUGACGCAACCCCC... |
KQ948217.1_277661-277529 | UUGGUGUUGCCACGCUGACGCGCCCCGUGGAAGGGAUCAGCGUGGUGAUGGUGGGCAAUCUCCGCCCUAGCCGGGGCGGCGUGUGCCGUUUGAGCGUUCGGCGUUCGGGAGUAGCCGCUCUCGGGCGCCGUCG | .(...((..(((((((((....((........))..)))))))))..)).((((.((....(((((((....)))))))....))))))....)....((((((((((((((....))))))))))))))... | [
"KQ948217.1/277661-277529",
"AL645882.2/7688336-7688466",
"FN554889.1/2480435-2480305",
"CP007574.1/7167097-7167224"
] | [
"UUGGUGUUGCCACGCUGACGCGC-CCCGUGGAAGGGAUCAGCGUGGUGAUGGUGGGCAAUCUCCGCCCUAGCCGGGGCGGCGUGUGCCGUUUGAGCGUUCGGCGUUCGGGAGUAGCCGCUCUCGGGCGCCGUCG",
"GCAGUGUUGCCACGUUGAUGCGC-CCGUCGGAAGGACUCAGCGUGGUGAUGGCGGGCAGUCGCCGCCCUUGCCGGGGCGGU-CAUGCCGCUU-AGCCUUCGGCGUCCGGGAGUUACCGCUCUCGGGCGCCGUCG",
"GCAGUGUUGCCACGCUGACGCGC-CCCUUGGAAGG... |
KX652377.1_10423-10479 | GCCCACGCAAGGGGAGGCAUCAUAUUGCCUCCGGGUGCUGACGACACCCCGUCCCCA | ....(((.....((((((........))))))(((((.......))))))))..... | [
"KX652377.1/10423-10479",
"HE574573.1/10278-10334",
"HE574574.1/10278-10334"
] | [
"GCCCACGCAAGGGGAGGCAU--------CAUAUUGCCUCCGGGUGCUGACGACACCCCGUCCCCA",
"GCCCACGCAAGGGGAGGCAU--------CAUUUCGCCUCCGGGUGCUGACGACACCCCGCCCCAG",
"GUCCACGCAAUGGGAGGCAU--------CAUUUCGCCUCCGGGUGCUGACUACUCCCCGUCCCCG"
] |
KX977552.1_1-152 | AGAAGUUCAUCUGUGUGAACUUAUUCCAAACAGCUUUUGGAGUAGUGCGUGUGAACGUAAACACAGUUUGAACGUUUUUUGGAUAGAGACAACUAUGUCUAACAAAAAACCAGGAAGACCCGGCUCAGGCCGGGUUGUCAAUAUGCUAAAGC | ....(((((.((((((...((.((((..((.....))..))))))(((((....))))).))))))..)))))((((((((.....((((......))))..))))))))...((.(((((((......))))))).))............. | [
"KX977552.1/1-152",
"MF380429.1/1-152"
] | [
"-AGAAGUUCAUCUGUGUGAACUU-AUUC-CAAACAGCUUUUGGAGU-AGUGCGUGUGAACGUAAACAC-AGUUUGAAC-GUUUUUUGGAUAGAGACAACUAUGUCUAA--CAAAAAACCA--GGAAGACCCGGCUCAGG-CCGGGUUGUCAAUAUGCUAAAGC",
"-AGAAGUUCAUCUGUGUGAACUU-UGUGAUUGACAGC-UCAACACA-AGUGCGGACUACCGUAAACAC-AGUUUGAAC-GUUUUUUGGAGAGAGACUACUAUGUCUAA--CAAAAAACCA--GGAAAACCCGGGGCAAC-CCGGGU... |
L77117.1_1659520-1659450 | GCCCCGGGAAACCGCGGGGGAUGAGCGACAGCCCGGCAAGCUGUGAGUCCCCUUUGCUCCCCCGGGGCACA | ((((((((.......(((((((..((....(((.)))..)).....))))))).......))))))))... | [
"L77117.1/1659520-1659450",
"CP001398.1/1107569-1107637",
"AP006878.1/899083-899151",
"AE009950.1/1865162-1865095"
] | [
"GCCCCGGG-AAACCGCGGGGGAUGAGCGACAGCC-C--GGCAAGCUGUGAGUCCCCUUUGCUCCCCCGGGGCACA",
"GCCCCCGGGAAACCGCGGGGGAUGAGC-----GCUUCGGCG-AGCUGUGAUUCCCCUUCGCUCCCCGGGGGCACA",
"GCCCCCGGGAAACCGCGGGGGAUGAGC----GCCUC--GGCGAGCCGUGAUUCCCCUUCGCUCCCCGGGGGCACA",
"GCCCCCGGGAAACCGCGGCGGGGGAGCG--AG-C----GGCGAGCUGUGAGCCCGCUUCGCUCCCCGGGGGU... |
LJSK01000184.1_20806-20724 | GUGAAUGAUGAUGCGUGUAUUCUGCAAUGCUGACCUGUCUGACGAGAAGCAAUACUACUACUAUGACUAUUGGCAUCUGACAC | .........(((((......((.((...)).))(.(.((....)).).)(((((.............))))))))))...... | [
"LJSK01000184.1/20806-20724",
"FR796419.1/39898-39980",
"FR798998.1/40159-40241"
] | [
"GUGAAUGAUGAUGCGUGUAUUCUGCAAUGCUGACCUGUCUGACGAGAAGCAAUACUACUACUAUGACUAUUGGCAUCUGACAC",
"GUGAAUGAUGAUGCAUGUAUUCUGCAAUGCGGACUCCACUGACGAGGAACAAUACUACUACUAUGACUAUUGGCAUCUGACGC",
"GUAAAUGAUGAUGCGUGUAUUCUGCAAUGCGGACCCCACUGACGAGGAUCAAUACUACUACAAUGACUAUUGGCAUCUGACCA"
] |
LNYW01000033.1_171156-171237 | AGACAGCGCUAUCGCGCUUCCUCAGCCCGAACGGCAUCGAAGUAACGACUGGCUCAAACAACUUUCUUAUCCAUAACUCACG | .((.(((((....)))))))...((((.(.......(...).......).))))............................ | [
"LNYW01000033.1/171156-171237",
"LNYW01000074.1/103952-104033",
"LNYW01000020.1/21047-21128"
] | [
"AGACAGCGCUAUCGCGCUUCCUCAGCCCGAACGGCAUCGAAGUAACGACUGGCUCAAACAACUUUCUUAUCCAUAACUCACG",
"AGACAGCGCUGUCGCGCCUCCUCAGCCCGAACGGCAUCGAAGUAAUGACCGGCUCAAACAACUUUCUUAUCCGAAACUCACG",
"AGACAGCGCUAUCGCGCUUCCUCAGCCCGAACGGCAUCGAAGUAACGACAAGAUCAAACAAGCUUCUUAUCCGAAACUCACG"
] |
LUGM01000002.1_960931-960827 | AAUCAUAUGCUAUAUUAAGAAUGUAGUUAAUACUAACUACUAGUCUUUUAUAUUCAUGAACAUAUUACUCUUUGAGAGCGACACAUCAGUGUCGCUCUUUUUUUU | ..(((..((......(((((..(((((((....))))))).....)))))....)))))................((((((((......))))))))........ | [
"LUGM01000002.1/960931-960827",
"AP008934.1/2423050-2423151",
"LNPF01000016.1/396663-396565"
] | [
"AAUCAUAUGCUAUAUUAAGAAUGUAGUUAAU-ACUAACUAC-UAGUCUUUUAUAUUCAUGAACAUAUUACUCUUUGAGAGCGACACAU-----CAGUGUCGCUCUUUUUUUU",
"AGAUA--UGAUAUAUUAAAGGUGUAGUUGGAAACCGACUAC-UAGUCUUUUAUAUUCAUGAACAUAUUACUCUU--AAGGCGACACGGA-----UGUGUCGUCUUUUUUUAU",
"AAUUG--UUAUAUUAUAGAU--GUAGUUGAAAAUCAACUAC-UAGUCUUUUAUAUUCAUGAACAUAUUACUCUU---AG... |
MF139576.1_10524-10619 | UGCAGUCAGGCCUCAAGACAUUGAGCCACCGGAUGGGACUAGACGGUGCUGCCUGCGCGUCCCCCCCUUUGAUCAAGCUAGAUGGUCAGUAGGGGU | ..(......(.((((......)))).)....)..(((........((((.....))))..)))................................. | [
"MF139576.1/10524-10619",
"NC_016997.1/10471-10566"
] | [
"UGCAGUCAGGCCUCAAGACAUUGAGCCACCGGAUGGGACUAGACG-GUGCUGCCUGCGCGUCCCCCCCUUUGAUCAAGCUAGAUGGUCAGUAGGGGU",
"UGCAGUCAGGCCUCACGAAUGUGAGCCACCGGAUGGGACUAGACG-GUGCUGCCUGCGCGUCCCCCCACGCAAUCAAGCUAGAUGGUUGUCAUGGGC"
] |
MF139576.1_10747-10844 | UAGGAAAGACUGGAGAUACCUUUGGUUCUUCGACAUUAACUCCAAUCGGCACAGAGCGCCGUGGGAAACGGAGUUAAUAUGGAAAAAACAUAAGUAUC | ...............((((.(.((.((.((((....(((((((....(((.......))).........)))))).)..)).)).)).)).).)))). | [
"MF139576.1/10747-10844",
"NC_016997.1/10693-10790"
] | [
"---UAGGAA-AGACUGGAG--AUACCUUUGGUUCUU--CGACAUUAAC-UCCAAUCGGCACAGAGCGCCGUGGGAAACGGAGUUAAU-AUGG-AAAAAACAUA--AGUAU--C",
"---UAGGAA-AGACUGGAG--AUACCUUUGGUUCUU--CGACACUAAC-UCCUAAUGGCACAGAGCGCCAUAAGAAACGGAGUUAGU-AUGG-AAAAAACAUA--AGUAU--C"
] |
MF582366.1_10276-10333 | GCCCACGCUAGGGGGUAGAGUAGACUCAUCUCCGGGUGUUGACGACACCCCGACCCCA | .....((.....(((.(...........).)))((((((.....))))))))...... | [
"MF582366.1/10276-10333",
"MF582365.1/10276-10333"
] | [
"GCCCACGCUAGGGGGUAGAG------UAGACUC-AUCUCCGGGUGUUGACGACACCCCGACCCCA",
"GCCCACGCAAGGGGAGAGAA------GAUUUUC-GCCUCCGGGUGUUGACGACACCCCGACCCCA"
] |
MNRC01000346.1_5084-5321 | CUUUUUUACGCAUAUGUAAUCACCUCACUACAUUUUACUGUUCCUGUUGAUUUUCUAACAGGUAUAGAAAAACGCAUAGUAUGGUUUGUAAGUUCCUAUCUGCGUAAAAGGAACAUUAAAAAAGUGCUGCAUUGCGGUAAAUAAAAAAAACCGCUAUUGUCAGUAGCAUUUUUGCAUGUUAAAAAUUUUCUUUGUUUAGAUGGCGGUUGACAAGCCGCCUUUUUUCCAUCCCCGAAAA | ((((..((..(..(((............(.(.((((.((((.(((((((......))))))).)))).)))).).)..(((.....))).......)))..)..)).)))).............(((((((..((((.............))))...)).)))))................................(((.(.(((((....))))).).)))............... | [
"MNRC01000346.1/5084-5321",
"DS264285.1/97081-96846",
"MNRE01000078.1/16408-16642",
"MNRD01000115.1/2449-2213",
"FP929061.1/407509-407745"
] | [
"CUUUUUUACGCAUAUGUAAUCACCUCACUACAUUUUACUGUUCCUGUUGAUUUUCUAACAGGUAUAGAAAAACGCAUAGUAUGGUU--UGUAAGUUCCUAUCUGC---GUAA-------AAGGAACAUUAAAAAA--GUGCUG-CAUUGCGGUAAAUAAAA-AAAA-CCGCU--A-UUGUCAGUAGCAU---UUUUGCAUGUUAAAAAUUU---UCU-------------UUGUUUAGAUGGCGGUU--GAC------A--AGCCGCCUUUUUUCCAUCCCCGAAAA--",
"CUUUUUUACGCAUAUUUAAU... |
MRAE01000032.1_24087-24181 | AAAGCUGAAGAAGAAGUCAAUAUAGAGGAAGAGAGAAGACUUUUUUAUGUAGGUAUUACAAGGGCAAAAGAAAAUUUGUAUUUAACUGUCCCAAA | ...(.(..........(..(.....(((...........))).....)..)(((...(.(..((...........)).).)...))))..).... | [
"MRAE01000032.1/24087-24181",
"MRAE01000012.1/31585-31679",
"AM412317.1/1551056-1551150",
"AM412317.1/1543024-1543118"
] | [
"---AAAGCUGAAGAAGAAGUCAAUAUAGAGGAAGAGAGAAGACUUUUUUAUGUAGGUAUUACAAGGGCAAA-AGAAAAUUUGUAUUUA-ACU-GUCC--CAAA",
"---AAAGCUGAAGAAGAAGUCAAUAUAGAGGAAGAGAGAAGACUUUUUUAUGUAGGUAUUACAAGGGCAAA-AGAAAAUUUGUAUUUA-ACU-GUCC--CAAA",
"---AAAGCAGAUGAGGAAGUUAAUAUAGAGGAAGAGAGAAGACUUUUUUAUGUAGGUAUCACAAGGGCAAA-AGAAAAUUUAUAUUUA-ACUGUA-C... |
NC_001451.1_1-200 | ACUUAAGAUAGAUAUUAAUAUAUAUCUAUUACACUAGCCUUGCGCUAGAUUUUUAACUUAACAAAACGGACUUAAAUACCUACAGCUGGUCCUCAUAGGUGUUCCAUUGCAGUGCACUUUAGUGCCCUGGAUGGCACCUGGCCACCUGUCAGGUUUUUGUUAUUAAAAUCUUAUUGUUGCUGGUAUCACUGCUUGUUUUG | ......(((((((((......)))))))))..((((((..............((.............))....(((.((((((((.(((((.....(((((((..(((.(((.((((....)))).)))))))))))))))))).)))).))))))).....................))))))................ | [
"NC_001451.1/1-200",
"NC_010800.1/1-200"
] | [
"--ACUUAAGAUAGAUAU------UAAUAUAUAUCUAUUA-CACUAGCCUUGCGCUAGA---UUUUUAACUUAACAA-AACGGAC---------UUAAAU--ACCUACAGCUGGUCCUCAUAGGUGUUCCAUUGCAGUGCACUUUAGUGCC----CUGGAUGGCACCUGGCCACCUGUCAGGUUUUUGUUAUUAAAAUCUUAUUGUUGCUGGUAUCACUGCUUGUUUUG",
"--ACUUAAGAUAGAUAU------UAAUAUAUAUCUAUCA-UACUAGCCUUGUGCUAGA---UUUCCAACUUAACAA-AACG... |
NC_001672.1_10910-10954 | CCCCUGCAUCAUGAUAAGGCCGAACAUGGUGCAUGAAAGGGGAGG | ((((.((((((((...........))))))))......))))... | [
"NC_001672.1/10910-10954",
"NC_027709.1/10639-10683",
"NC_001809.1/10640-10683",
"NC_005062.1/10557-10599"
] | [
"CCCCUGCAUCAUGAUAAGGC-CGAACAUGGUGCAUGAAAGGGGAGG",
"CCCCCGCACCAUGACAAGGC-CGAACAUGGUGCACCAAAGGGGAGG",
"CCCCCGCCCCAUGACAAGGC-CGAACAUGGAGCAUUAAAGGG-AGG",
"CCCCCGCACCAUG-GAAGGC-CAAACAUGGUGCAUG-AAGGGAAAG"
] |
NC_001846.1_1-300 | UAUAAGAGUGAUUGGCGUCCGUACGUACCCUCUCAACUCUAAAACUCUUGUAGUUUAAAUCUAAUCUAAACUUUAUAAACGGCACUUCCUGCGUGUCCAUGCCCGCGGGCCUGGUCUUGUCAUAGUGCUGACAUUUGUAGUUCCUUGACUUUCGUUCUCUGCCAGUGACGUGUCCAUUCGGCGCCAGCAGCCCACCCAUAGGUUGCAUAAUGGCAAAGAUGGGCAAAUACGGUCUCGGCUUCAAAUGGGCCCCAGAAUUUCCAUGGAUGCUUCCGAACGCAUCGGAGAAGUUGGGUAACC | .....(((.(.(..(........)..)..).))).......(((((.....))))).........................(((((....((..(.(((.(((....))).))).)..))...)))))...........................................(.(........).).........((...(..........)))..............(..((((.((........))))))..).............................................. | [
"NC_001846.1/1-300",
"AC_000192.1/1-300",
"NC_012936.1/1-267"
] | [
"U--A-UAAGAGUGAUUGGCGUCCGUACGUACCCUCUCAACU--------CUAAAACUCUUGU-AGUUUAAAU-----CUAAUCUAAACUUUAUAAACG------------GCACUUCCUGC-GUGUCCAUGCCCG--------------------------CGGGCCUGGUCUUGUCAUAGUGCUGACA----------UUUGUAGUUCCUUGACUUUCGUUCU--CUGCCAGUGACGUGUCC-AUUCGGCGCC--AGCAGCCCACCCAUAGGUUGCAUAAUGGCAAA---GAUGGGCAAAUACGGUCUCGGCUU... |
NC_003045.1_30698-31026 | AAGAUGGAUGAGCCCUUUACUGAAGACACCUCAGAAAUAUAAGAGAAUGAACCUUAUGUCGGCACCUGGUGGUAACCCCUCGCAGGAAAGUCGGGAUAAGGCACUCUCUAUCAGAAUGGAUGUCUUGCUGCUAUAAUAGAUAGAGAAGGUUAUAGCAGACUAUAGAUUAAUUAGUUGAAAGUUUUGUGUGGUAAUGUAUAGUGUUGGAGAAAGUGAAAGACUUGCGGAAGUAAUUGCCGACAAGUGCCCAAGGGGAAGAGCCAGCAUGUUAAGUUACCAUCCAGUAAUUAGUAAAUGAAUGAAGUUAAUUAUGGCCAAUU... | .........................................(((((.((..((((((.((((..((((..((......))..))))....)))).)))))))).)))))..........((.((((.((((((((((...........))))))))))......((((((((..(((..((..(((..............(((((((............((((((((.........))).))))).(((...))).....)))))))..............)))...))..)))........))))))))....((....... | [
"NC_003045.1/30698-31026",
"NC_006213.1/30411-30713",
"NC_026011.1/30919-31234"
] | [
"--AAGAUGGAUGAGCCCUUUACUGA------AG-------------ACACCUCAGAAAUAU-AAGAGAAUGAACCUUAUGUCGGCACCUGGUGG-UAACCCCUCGCAGGAAAGUCGGGAUAAGGCACUCUCUAUCAGAAUGGAUGUCUUGCUGCUAUAAUAGAUAGAGAAGGUUAUAGCAGACUAUAGAUUAAUUAGUUGAAAG--UUUUGUGUGGUAAUGUAUAGUGUUGGAGAAAGUG--AAAG-------ACUUGCGG--------------AAG--------UAAUUGCCGACAAGUG-------------... |
NC_003687.1_10734-10839 | UCCCCCAGGAAACUGGGGGGGCGGUUCUUGUUCUCCCUGAGCCACCACCAUCCAGGCACAGAUAGCCUGACAAGGAGAUGGUGUGUGACUCGGAAAAACACCCGCU | .(((((((....)))))))(((((....((((....(((((.(((((((((((((((.......))))).......))))))).))).)))))...)))).))))) | [
"NC_003687.1/10734-10839",
"NC_001809.1/10766-10871",
"NC_027709.1/10765-10870",
"NC_001672.1/11036-11141",
"NC_003690.1/10838-10943",
"NC_005062.1/10682-10787",
"AF311056.1/10715-10800"
] | [
"UCCCCCAG-GAAACUGGGGGGGCGGUUCUUGUUCUCCCUGAGCCACCACCAUCCAGGCACAGAUAGCCUGACAAGGAGAUGGUGUGUGACUCGG-AAAAACACCCGCU",
"UCCCCCUC-GACAGAGGGGGGGCGGUUCUUGUUCUCCCUGAGCCACCAUCACCCAGACACAGAUAGUCUGACAAGGAGGUGAUGUGUGACUCGG-AAAAACACCCGCU",
"UCCCCCUC-GACAGAGGGGGGGCGGUUCUUGUUCUCCCUGAGCCACCAUCACCCAGACACAGAUAGUCUGACAAGGAGGUGAUGCGU... |
NC_004355.1_10531-10570 | CAAAGCCUCCCAGAGAGGGCCGAACUGGGAGGUUAUGAAG | ((...((((((((...........))))))))...))... | [
"NC_004355.1/10531-10570",
"HM055369.1/10547-10586"
] | [
"CAAAGCCUCCCAGAGAGGGC-CGAACUGGGAGGUU-----AUGAAG",
"CAAAACCUCCCAGAGAAGGC-CGAACUGGGAGGCC-----AUGAAG"
] |
NC_005064.1_11282-11367 | CCUCCGUAAUGUGAAAAAGUAUGGGGAAAAGAACCCAGCUAAAUCUCCCACCGAUAGGGAGUUUGGACUAUCUUUUCUAUACCAUA | ...................((((.(((.((((......(((((.(((((.......))))))))))....)))).)))....)))) | [
"NC_005064.1/11282-11367",
"NC_001564.2/10593-10677",
"NC_012932.1/10972-11057"
] | [
"-CCUCCGUAAUGUGAAAA-AGUAUG-GGGAAAA-GA-ACCCAGCUAAA-UCU----CCCACCGAUAGGG---------AG-UUU-GG-ACUA-UC-UUUUCUAUACCAUA---",
"-CUCCGUUAAUGUGAAAA-AGUAU--GGGGAAA-GA-ACUCAUCUUAA-CCU----CCCACCGUUAGGG---------AG-UUU-UG-AUUA-UC-UUUUCUAUACCAUA---",
"-CCUCCGAAAUGUGAAAA-AUUAUG-GGGAAAA-GU-ACCCAUCUAAG-CCU----CCCACCGUUAGGG--------... |
NC_005831.2_1-320 | CUUAAAGAAUUUUUCUAUCUAUAGAUAGAGAAUUUUCUUAUUUAGACUUUGUGUCUACUCUUCUCAACUAAACGAAAUUUUUCUAGUGCUGUCAUUUGUUAUGGCAGUCCUAGUGUAAUUGAAAUUUCGUCAAGUUUGUAAACUGGUUAGGCAAGUGUUGUAUUUUCUGUGUCUAAGCACUGGUGAUUCUGUUCACUAGUGCAUACAUUGAUAUUUAAGUGGUGUUCCGUCACUGCUUAUUGUGGAAGCAACGUUCUGUCGUUGUGGAAACCAAUAACUGCUAACCAUGUUUUACAAUCAAGUGACACUUGCUGUUGCAA | ....(((((.((.((((((....)))))).))..)))))...(((((.....)))))................(((((((.(((((..(((((((.....)))))))..)))).)......))))))).......(((.....((((((.((.(((((((.........(((......((((((((......))))))))....))).........((((((((......))))))))...((....((((((......))))))....))))))).)))))))))).......)))....................... | [
"NC_005831.2/1-320",
"NC_032107.1/1-275"
] | [
"C--------UUAAAGAAU-UUU---UCUAUCUAUAGAUAGA-----GAAUUUUCUUAUUUAGACUUUGU-GUCUACUCUUCUC----------------AACUAAAC-GAAAUUUU-----U-CUAGUGCUGUCAUUUGUU---AUGGCAG--UCCUAGUGUAAUUG-----AAAUUUCGUC------AAGUUUGUA-A-ACUGGUUAG-GCAAGUGUUGUAUUUUCUGUGUCUAAGCACUGGUGAUUCUGUUCACUAGU--GCAUACA-UUGAUAUUUAAG--UGGUG-UUCCGU-CACUGCUUAUUGUGGAAG... |
NC_006213.1_1-300 | AUUGUGAGCGAUUUGCGUGCGUGCAUCCCGCUUCACUGAUCUCUUGUUAGAUCUUUUUGUAAUCUAAACUUUAUAAAAACAUCCACUCCCUGUAAUCUAUGCUUGUGGGCGUAGAUUUUUCAUAGUGGUGUUUAUAUUCAUUUCUGCUGUUAACAGCUUUCAGCCAGGGACGUGUUGUAUCCUAGGCAGUGGCCCGCCCAUAGGUCACAAUGUCGAAGAUCAACAAAUACGGUCUCGAACUACACUGGGCUCCAGAAUUUCCAUGGAUGUUUGAGGACGCAGAGGAGAAGUUGGAUAACC | .....(((((..(...........)...)))))....(((((......))))).............................(((((....(..(((((((((....)))))))))...)...))))).............................................(((........)))..........(...(........))...............(..((((.((........))))))..).............................................. | [
"NC_006213.1/1-300",
"NC_003045.1/1-300"
] | [
"---AUUGUGAGCGAUUUGCGUGCG-UGCAUCCCGCUUCACU-----------GAUCUCUUGUUAGAUCUUUUU----GUAAUCUAAACUUUAUAAAAA---------CAUCCACUCCCUG--UAAUCUAUGCUUG--------------------------UGGGCGUAGAUUUUUCAUAGUGGUGUUU----------AUAUUCAUUUCUGCUGUUAACAGCUUUCAGCCAGGGACGUGUUGUAUCCU-AGGC--AGUGGCCCGCCCAUAGGUCACA--AUGUCGAA---GAUCAACAAAUACGGUCUCGAACU... |
NC_011547.1_26087-26471 | AAUUCUUGGGUUUUUAACACUUGUGUUCUACUACUGGAAUUUUCGUCCUCGAAGGUUUCAGCAAAUUAUAAAGCCAGAGAGCCAGUCAGAGGGCGCUACCAUGCAAACUAGGGCUGGCUACUCUUGCACAGAAUCACCUUUCUAUAAUAACCAGUGCAAGAAGGGUUAUUAUACCAUUUAAUGUGCCGAGGCCACGCGGAGUACGAUCGAGGGUACAGCACAAUCUCAACAUUUGUUUAAUUUAACAACUCAAACACUGAAGAAAGUCAAAGGACUGUACUACUUUGUAGGUGUAGCAGUCGCCCAGUGGGAAAGCGUCA... | ...................................((((((((((....))))))))))................((((((((((((..((...((......))...))..)))))))).))))............((((((((((((((((...........))))))))))(((((((((((((....(((.((((.....))..))..)))...)))).........(((((((..(((((((.((..(((((((((............((((((.((((...)))).....)))))).(((...)))......)))... | [
"NC_011547.1/26087-26471",
"NC_011550.1/26152-26536"
] | [
"AAUUC-----------UUGGGUUUUUAACACUUGUGUUCUACUACUGGAAUUUUCGUCC-UCGAAGGUUUCAGCAAAUUAUAAAGC----CAGAG-AGCCAGUCAGAGGGCGCUACCAUGCAAACUAGGGCUGGCUACUCUUGCACAGAAUCACCUUUCUAUAA-UAACCAGUGCAAGAAGGGUUAUUAUACCA-UUUAAU-GUGCCGAGGCCACGCGGAGUACGAUCGAGGGUACAGCAC--AAUCUCAACAUUUGUUU-AAU------UUA--ACAACUC-AAACACUGAAGAAAG-UCAAAGGACUGUACUA... |
NC_012936.1_30920-31249 | CUAGACGAUGGCGUUGUGCCUGAUGGGUUGGAUGACUCUAAUGUGUAAAGAGAAUGAAUCCUAUGUCGGCGCUCGGUGGUAACCCCUCGCGAGAAAGUCGGGAUAGGACACUCUCUAUCAGAAUGGAUGUCUUGCUGUCAUAACAGAUAGAGAAGGUUGUGGCAGACCCUGUAUCAAUUAGUUGAAAGAGAUUGCAAAAUAGAGAAUGUGUGAGAGAAGUUGCAAGGUCCUACGUCUAACCAUAGAACGGCGAUAGGCGCCCCCUGGGAAGAGCUCACAUCAGGGUACUAUUCCUGCAAUGCCCUAGUAAAUGAAUGAAG... | ................................................(((((.((..((((((.((((..((((..((......))..))))....)))).)))))))).)))))..................((((((((((...........)))))))))).......(((((((..(((..((..(((..............(((((((..............(((((((..............))).))))..(((...))).....))))))).................)))...))..)))........))... | [
"NC_012936.1/30920-31249",
"NC_001846.1/31027-31334",
"AC_000192.1/31196-31511"
] | [
"--CUAGACGAUGGCGUUGUGCCUGAUGGGUUGG-------------AUGACUCUAAUGUGUAAAGAGAAUGAAUCCUAUGUCGGCGCUCGGUGG-UAACCCCUCGCGAGAAAGUCGGGAUAGGACACUCUCUAUCAGAAUGGAUGUCUUGCUGUCAUAACAGAUAGAGAAGGUUGUGGCAGACCCUGUAUCAAUUAGUUGAAAG--AGAUUGCAAAAUAGAGAAUGUGUGAGAGAAGUU-GCAAGG-------UCCUACGUCUAACC--------AU---------AGAACGGCGAUAGGCG-------------... |
NC_019843.3_1-300 | GAUUUAAGUGAAUAGCUUGGCUAUCUCACUUCCCCUCGUUCUCUUGCAGAACUUUGAUUUUAACGAACUUAAAUAAAAGCCCUGUUGUUUAGCGUAUCGUUGCACUUGUCUGGUGGGAUUGUGGCAUUAAUUUGCCUGCUCAUCUAGGCAGUGGACAUAUGCUCAACACUGGGUAUAAUUCUAAUUGAAUACUAUUUUUCAGUUAGAGCGUCGUGUCUCUUGUACGUCUCGGUCACAAUACACGGUUUCGUCCGGUGCGUGGCAAUUCGGGGCACAUCAUGUCUUUCGUGGCUGGUGUGA | .....(((((.(((((...)))))..)))))......(((((.....)))))......................................(((((...(((...((.((((((..............................))))))))..)))..)))))................................................(((.........)))...........((...(((......)))))................(((((((.(((......)))))))))). | [
"NC_019843.3/1-300",
"NC_038294.1/1-300"
] | [
"G---AUUUAAGUGAAUAGCUU---GGCUAUCUCACUUCCC---------CUCGUUCUCUUGC-AGAACUUUGA---UUUUAACG-AACUUAAAUAAAAGCCCUGUUGUUUAGCGUAUCGUUGCACUUGUCUGGUGGGAUUGUGGCAUUAAUUUGCCUGCUCAUCUAGGC-AGUGGACAUAUGCUCAACACUGGGUAUAAUUCUAAUU------GAAUACUAUUUUUCAGUUAGAGC-GUCGUGUCUCUUGUACGUCUCGGUCACAAUACACGGUUUCGUCCGGUGCGUGGC-AAUUCGGGGCACAUCAUGUCUUU... |
NC_019843.3_29789-30107 | UGAUGUUAACACUGAUUAGUGUCACUCAAAGUAACAAGAUCGCGGCAAUCGUUUGUGUUUGGCAACCCCAUCUCACCAUCGCUUGUCCACUCUUGCACAGAAUGGAAUCAUGUUGUAAUUACAGUGCAAUAAGGUAAUUAUAACCCAUUUAAUUGAUAGCUAUGCUUUAUUAAAGUGUGUAGCUGUAGAGAGAAUGUUAAAGACUGUCACCUCUGCUUGAUUGCAAGUGAACAGUGCCCCCCGGGAAGAGCUCUACAGUGUGAAAUGUAAAUAAAAAAUAGCUAUUAUUCAAUUAGAUUAGGCUAAUUAGAUGAUUUGC | ..................................((((((...(((((..(...(((..((.......))...)))...)..))))).).))))).........(((((((.((((((((((...........))))))))))...(((((((((((((((((...(((.............((((((((............((((((((................))).))))).(((...))).....)))))))).............)))...)))))))....))))))))))....((....))))))))).. | [
"NC_019843.3/29789-30107",
"NC_009020.1/30152-30466",
"NC_009019.1/29956-30270",
"NC_038294.1/29781-30099"
] | [
"-UGAUGUUAACACUGAUUAGUGU-CA---------------------------CUCAAAGUAACAAGA-UCGCGGCAAUCGU--UUGUGUU-UGGCAACCCCAUCUCACCA---U-CGCUUGUCCACUCUUGCACAGAAUGGAA-UCAUGUUGUAAUUACAGUGCAAUAAGGUAAUUAUAACCC---AUUUAAUUGAUAGCUAU-GCUUUAUUAAAGUGUGUAGCUGUAGAGAGAAUGU--UAAAG-------ACUGUCACCUCUGC--------UUGA-------UUGCAAGUGAACAGUG-------------... |
NC_028752.1_1-320 | ACUUAAGUGUCUUAUCUAUCUAUAGAUAGAAAAGUCGCUUUUUAGACUUUGUGUCUACUCUUCUCAACUAAACGAAAUUUUUGCUACGGCCGGCAUCUCUGAUGCUGGAGUCGUGGCGUAAUUGAAAUUUCAUUUGGGUUGCAACAGUUUGGAAAUAAGUGCUGUGCGUCCUAGUCUAAGGGUUCUGUGUUCUGUCACGGGAUUCCAUUCUACAAACGCCUUACUCGAGGUUCUGUCUCGUGUUUGUGUGGAAGCAAAGUUCUGUCUUUGUGGAAACCAGUAACUGUUCCUAAUGGCCUGCAACCGUGUGACACUUGCCG | ....(((((.(((.((((((....)))))).))).)))))..(((((.....)))))................(((((((.((((((..(((((((.....)))))))....))))))......))))))).......(((.....(((.(((.((.(((((((........((.......((((((((......))))))))......))...........((.((((.......)))).))....((....((((((......))))))....))))))).))))))).)))......)))................. | [
"NC_028752.1/1-320",
"NC_002645.1/1-320"
] | [
"A--------CUUAAGUGUCUUA---UCUAUCUAUAGAUAGA-----AAAGUCGCUU-UUUAGACUUUGU-GUCUACUCUUCUC----------------AACUAAAC-GAAAUUUU-----UGCUACGGCCGGCAUCUCUG---AUGCUGGAGUCGUGGCGUAAUUG-----AAAUUUCAUU------UGGGUUGCA-ACAGUUUGGAA-AUAAGUGCUGUGCGUCCU-AGUCUAAGGGUUCUGUGUUCUGUCACGGGAU-UCCAUUCUACAAACGCCUUAC--UCGAGGUUCUGU-CUCGUGUUUGUGUGGAAG... |
NC_028752.1_27095-27383 | UCCGGUCUAUGCAUGAUGGCAUGAUCAGAGCUGCUUUUAACUAACAUGAUCCCUUGCUUCGGCUUGAUAAGGAUCUAGUCUUAUACACAAUGGUAAGCCAGUAGUAGUAGAGGUAUAAGAAAUUUGCUACUAUGUUACUGAACCUAGGUGAACACUAGUAUAACUCAUUACAAAUGUGCUGGAGUAAUUAAAGAUCGCUUUGACGAGCCAACAAUGGAAGAGCCAGUCAUUUGUAUUGAGACCUAUCUAGUUAGUAACUGCUAAUGGAACGGUUUCGAUAUGGAUACAC | ...............................................................................(((((........)))))...(((((((((((...........)))))))))))...((((......(((....(((((.....(.......((....(((((...............((......))((......)).....)))))..))......)........))))).....)))..........))))................ | [
"NC_028752.1/27095-27383",
"NC_002645.1/27017-27277"
] | [
"UCCGGUCUAUGCA-----------UGAUGGCAUGAUCAGAGCUGCUUUUAACUAACAUGAUCCCUUGCUU----------CGGCUUGAUAAGGAUCUAGUCUUAUACACAAUGGUAAGCCAGUAGUAGUA-GAGGUAUAAGAAAUUUG-CUACUAUGUUACUGAACCUAGGUGAACACUAGUA--UAACUCAUUACAAAUGUGCUGGAGUAA-UUAAAGAU-CGCUUUGACGAGCCA---------------ACAAUGGAAGAGCC-AGU-CAUUUGU-AUUGAGACCUAUCUAGUUAGUAACUGCUAAU--GGA... |
NC_028806.1_1-320 | AGUAAAGUGAGUGUAGCGUGGCUAUAUCUCUUCUUUUACUUUAACUAGCUUUGUGCUAGAUUUUGUCUUCGGACACUAACUCGAACUAAACGAAAUAUUUGUCUUUCUAUGAAAUCAUAGAGGACAAGCGUUGAUUAUUUCCAUUCAGUUUGGCAAUCACUCCUUGGAACGGGGUUGAGCGAACGGUGCAGUAGGGUUCCGCCCCUAUUUCGUAAGUCGCCUAGUAGUAGCGAGUGCGGUUCCGCCCGUACAACGUUGGGUAGACCGGGUUCCGUCCUGUGAUCUCCCUCGCCGGCCGCCAGGAGAAUGAGUUCCAAACA | (((((((....((((((...))))))......))).))))....(((((.....)))))................................((((((.((((((.(((((((..)))))))))))))........)))))).............(((..(((((.((..((.((....((((.......(((((((......))))))).......)))).........(...((((((......))))))..)...((......((((......))))......)).)).).).))...))))).....)))....... | [
"NC_028806.1/1-320",
"NC_038861.1/1-320",
"NC_002306.3/1-320"
] | [
"-------------AGUA-AAGUGAGUGUAGC-GUGGCUAUAUCUCUUCUUUUACUUUAACUAGCUUUGU-GCUAGAUUUUGUCUUCGGACACUAACUCGAACUAAAC-GAAAUA------UUUGUCUUUCUAUGAA--------AUCAUAGA---GGACAAGCGUUGAU----UAUUUCCAUUCAGUUUGGCAAUC---ACUCCUU----GGAACGGGGUUG-----AGCGAACGGUGCAGUAGGGUUCCGCCCCUAUUUCGUAAGUCGCCUAGUAGUAGCG-AGUGCGGUUCCGCCCGUACAACGUUGGGUAGA... |
NC_028806.1_27811-28110 | UAUAGAUUGUUAGUUAUAUUAAUGUAAGGCAACCCGAUGUUUAAAACUGGUUUUUCUGAGGAACUACUGGUCAUCGCGCUGUCUACUCUUGUACAGAAUGGUAAGCACGUGUAAUAGGAGGUACAAGCAACCCUAUUGCAUAUUAGGAGGUUUAGAUUUGAUUUGGCAAUGCUAGAUUUAGUAAUUUAGAGAAGUUUAAAGAUCCGCUAUGACGAGCCAACAAUGGAAGAGCUAACGUCUGGAUCUAGUGAUUGUUUAAAAUGUAAAAUUGUUUGAAAAUUUUCCUUUUGAUAGUGAUAC | .......................................................................................(((((........)))))...(((((((((...............)))))))))...((((((....(((.....((.....(((((...((((....((((.................((......))((......)).....))))...))))...))))).........))......)))..........)))))).............. | [
"NC_028806.1/27811-28110",
"NC_038861.1/28286-28580",
"NC_002306.3/29055-29354"
] | [
"UAUAGAUUGUUAGUUAUAUUA-AUGUAAGGCAACCCGAUGUUUAAA-------ACUGGUUUUUCUGAGGAACU-----ACUGGUCAUCGCGCUGUCUACUCUUGUACAGAAUGGUAAGCACGUGUAAUAGGA-GGUACAAGCAACCCU-AUUGCAUAUUAGGAGGUUUAGAUUUGAUUUGG---CAAUGCUAGAUUUAGUAAUUUAGAGAAGUUUAAAGAUCCGCUAUGACGAGCCA---------------ACAAUGGAAGAGCU-AACGUCUGGAUCUAGUGAUUGUUUAAAAUGUAAAAUUGUUUGAAAAUU... |
NC_030292.1_1-320 | ACUUUUAAAGAUAAGUGAGUGUAGCGUAGCUGCCUACUUUCUUUAACUUGACUCUAAGUCAAAUCUACUCAACUAAACGAAAUUUUGUUGUUUCCCAUUUAAUGGGAGCAACAUCUUUGGUAAUUUCGUUUCAUUCAUAGCUUGUUGUCCAUAUUGAGUCUAGGAGUUUGGCUAGCUGUGUGGGUUCCGUCUCACAUAGUAGGUGUGUUGGCUAGUUCCGUCUAGUCUUCACGUGGAUCUCAGUUCCGUCUGGGUGAAACCUAACCCCCCUCACUAUGGUGUUCAAGCAUUUUAGGAUCCUCGUCAAUGAGGACCAGGAA | .....((((((.(.(.....(((((...)))))...)).))))))..(((((.....)))))................((((((.((((((.(((((((.)))))))))))))........))))))..............(((.....((((.(((.....((.(((.........(((((((......))))))).........(..((((((......)))))).)...(.....(((((......)))))......).))).))..))).)))).....))).................................. | [
"NC_030292.1/1-320",
"NC_023760.1/1-320"
] | [
"AC------UUUUAAAGAUAAGUGAGUGUAGC-GUAGCUGCC----UAC-UUUCUUUAACUUGACUCUAA-GUCAAAUCUACUC----------------AACUAAAC--GAAAUUU-----UGUUGUUUCCCAUUU---------AAUGGGA---GCAACAUCUUUGGU---AAUUUCGUUUCAUUCAUAGCUUGUUGUCCAUAUUGAGUCUAGGAGUUUGGCUAGCUGUG-----------UGGGUUCCGUCUCA-----------CAUAGUAGGUGUGUU--GGCUAGUUCCGUCUAGUCU-UCACGUGGAU-... |
NC_030292.1_28134-28416 | CCUGUAUCUAAUAAAAUUGAACAUGAUGAUUUAUAAGAAGAUCUUCGGGCGAGUACCGCUAGAUCUACUCUUACACAGAAUGGUAAGCACGUAUCUAUGCAGGGUGUAAGUAACUCAUAGAUAUAUUAGGAAGUUUAGAUUGAACUAUUCAAUACUAGAUUGAAAAAUUGAGAGUAAUUUAAAGAUCCGCUUAGACGAGCCAACAAUGGAAGGGCUCAACUUUUGGAUCUAGUCACUUGUUUAUAGUAAAUUGAUGAUAAUUCUCCUUUUGAUAGUGAUACAC | .....................................................................(((((........)))))...(((((((((.((...........)))))))))))...((((.(....(((.....((......((((...(.(((...(.((.................((......))((......)).....))..)..))).)...))))........))......))).........).))))................ | [
"NC_030292.1/28134-28416",
"NC_023760.1/28641-28894"
] | [
"-------CCUGUAUCUAAUAAAAUUGAACAUGAUGAUUUAUAAGAA-------GAUCUUCGGGCGAGUACCGC-----UAGAUC------------UACUCUUACACAGAAUGGUAAGCACGUAUCUAUGCAGGGUGUAAGUAACUCA-UAGAUAUAUUAGGAAGUUUAGAUUGAACUAUU---CAAUACUAGAUUGAAAAAUUGAGAGUAAUUUAAAGAUCCGCUUAGACGAGCCA---------------ACAAUGGAAGGGCUCAACUUUUGGAUCUAGUCACUUGUU--UAUAGUAAAUUG-AUGAUAAUU... |
U00096.2_3657034-3657105 | GUAUCCACCAGUAGAACCCUUCGUUGCCCGAAUGCUGGCAGGAACUGUUGGCAGAACGGCAACAUUUUUUUU | ......................((((((....(((((((((...)))))))))....))))))......... | [
"U00096.2/3657034-3657105",
"CU651637.1/3704375-3704446",
"CU928164.2/4170340-4170411",
"AEME01000001.1/4549121-4549050",
"ADAX01000155.1/15878-15949"
] | [
"GUAUCCACCAGUAGAACCCUUCGUUGCCCGAAUGCUGGCAGGAACUGUUGGCAGAACGGCAACAUUUUUUUU",
"GUAUCCACCAGUAGAACCCUUCGUUGCCCGAAUGCUGGCAGAAACUGUUGGCAGAACGGCAACAUUUUUUUU",
"GUAUCCACCAGUAGAACCCUUCGUUGCCCGAAUGCUGGCAGAAACUGUUGGCAGAACGGCAACAUUUUUUUG",
"GUAUCCACCAGUAGAAACCUUCGUUGCCCGGAUGCAGGCAGAGACUGUCGGCAGAACGGCAACAUUUUUUUU",
"GUA... |
U00096.2_4056241-4056348 | AGUGCUUCAAUGGAAACAUUAAGCACCAUGUUGGUGCAAUGACCUUUGGAUAACCCUUUUUAUGCUCCGUGAAAGCGAUCACAAAGGGACUCUGCAAUACUUGUUUGC | .((((((.((((....))))))))))((.((...((((..(.(((((((((.....((((((((...))))))))..))).))))))..)..))))..)).))..... | [
"U00096.2/4056241-4056348",
"AGSG01000231.1/16911-16804",
"AFGE01000068.1/2652-2545",
"ADUF01000264.1/6873-6980",
"AEJU01000210.1/23790-23683"
] | [
"AGUGCUUCAAUGGAAACAUUAAGCACCAUGUUGGUGCAAUGACCUUUGGAUAACCCUUUUUAUGCUCCGUGAAAGCGAUCACAAAGGGACUCUGCAAUACUUGUUUGC",
"AGUGCUUCAAUGGAAACAUUAAGCACCAUGAUGGUGCAAUGACCUUUGGAUAACCCUUUUUAUGCUCCGUGAAAGCGAUCACAAAGGGACUCUGCAAUACUUGUUUGC",
"AGUGCGUCAAUGGAAACAUUAAGCACCAUAUUGGUGCAAUGACCUUUGGAUAACCCUUUUUAUGCUCCGUGAAAGCGAUCACAAAGG... |
U00096.2_4434589-4434711 | CAGGGACAUCCUUUUAUCAUCGGGAAUACGAAAGAAAAGGGAGAAUAAACGUCUUACUUAUAGAACAGUGAAGAAUGCCACAAUUUUACGCUUUGAAAAUGAUGACACUAUCACAGUUGGCGC | ..(((((.(((((((.((.(((......)))..)))))))))........))))).....(((((..(((........)))..)))))((((.......(((((....))))).....)))). | [
"U00096.2/4434589-4434711",
"CU928160.2/4522398-4522520",
"AEZI01000045.1/83214-83336",
"AEVY01000053.1/52442-52564",
"CP001383.1/4495125-4495003"
] | [
"CAGGGACAUCCUUUUAUCAUCGGGAAUACGAAAGAAAAGGGAGAAUAAACGUCUUACUUAUAGAACAGUGAAGAAUGCCACAAUUUUACGCUUUGAAAAUGAUGACACUAUCACAGUUGGCGC",
"CAGGGACAUCCUUUUAUUAUCGGGAAUACGAAAGAAAAGGGAGAAUAAACGUCUUACUUAUAGAACAGUGAAGAAUGCCACAAUUUUACGCUUUGAAAAUGAUGACACUAUCACAGUUGGCGC",
"CAGGGACAUCCUUUUAUCAUCGGGAAUUCGAAAGAAAAGGGAGAAUAAACCUCUUAC... |
U00096.3_3648294-3648377 | UUAGAUAAGAACUCUCUCACUCCAGCCAGAGCCACCAACUCAGGGCUGGAAAGUAAAAAACCGACGCAAAGUCGGUUUUUUUAC | ....................(((((((.(((.......)))..)))))))....(((((((((((.....)))))))))))... | [
"U00096.3/3648294-3648377",
"CP000034.1/3295420-3295337"
] | [
"UUAGAUAAGAACUCUCUCACUCCAGCCAGAGCCACCAACUCAGGGCUGGAAAGUAAAAAA--CCGACGC-AAAGUCGG-UUUUUUUAC",
"UUAGAUGUGGGCAUUCUCACUCCAGCCAGAGCCACCAACUCUGGGCUGGAAAGUAAAAAA--CCGACGC-AAAGUCGG-UUUUUUUAC"
] |
URS0000009FDD_6239_1-64 | CGGCCCUUACCGUUUAAUACAUGUUCCCGGUCGAUGCACCAUGUAUUAAACGGUAAGGGCCGGC | (((((((((((((((((((((((................))))))))))))))))))))))).. | [
"URS0000009FDD_6239/1-64",
"URS00005CA60D_6239/1-64"
] | [
"CGGCCCUUACCGUUUAAUACAUGUUCCCGGUCGAU--GCACCAUGUAUUAAACGGUAAGGGCCGGC",
"CGGCCCUUACCGUUUAAUACAUGGUGC--AUCGACCGGGAACAUGUAUUAAACGGUAAGGGCCGGC"
] |
URS000001D890_7237_1-84 | UAUGGUUAGGUAGGUACCCAAAUAUCUUGAUUAUAAUUUUCCUUUAGGAACUUACACAGAUAUUUCUGUACCUACAGGAAUUGU | .........((((((((..((((((((...........((((....)))).......))))))))..))))))))......... | [
"URS000001D890_7237/1-84",
"URS0000371B74_7237/5-88"
] | [
"UAUGGUUAGGUAGGUACCCAAAUAUCUUGAUUAUAAUUUUCCUUUAGGAACUUACACAGAUAUUUCUGUACCUACAGGAAUUGU",
"UGUGGUUAGGUAGGUACCCAAAUAUCUUGAUUAUAAUUUUCCAUUAGGAACUCACACAGAUAUUUCUGUACCUACAGGCCUUGU"
] |
URS0000020247_6239_2-64 | AGUGUAACCACUCUUCUCCUUCCGAGUAUUGAUUAUCGAGAAGAGAUCAGCGGUUACACUACA | (((((((((.((..((((.((((((..........))).)))))))..)).)))))))))... | [
"URS0000020247_6239/2-64",
"URS000013478E_6239/1-63"
] | [
"AGUGUAACCACUCUUCUCCUUCCGAGUAUUGAUUAUCGAGAAGAGAUCAGCGGUUACACUACA",
"AGUGUAACAACUCUUCUCCUUCCGAAAACCAAUAAUCGAGAAGAGAUGAGCGGUUGUGCUUCA"
] |
URS000003E159_7237_1-118 | ACGGAAUUUUACGUAUUCAUCCGUUUUGUCUGUAUCGCGAAGUUUGGAGUCGUUUUUGUUGAAGCGAUUCCACGCAUUUUUUGAGUGCUGAUAUUUUGGCUUGAAAAUAAGAGGCCGU | ((((..(((((....((((.(((...((((.((((((.(((((.((((((((((((....)))))))))))).)).))).).)).))).))))...)))..))))..)))))..)))) | [
"URS000003E159_7237/1-118",
"URS0000563236_7237/1-117"
] | [
"ACGGAAUUUUACGUAUUCAUCCGUUUUGUCUGUAUCGCGAAGUUUGGAGUCGUUUUUGUUGAAGCGAUUCCACGCAUUUUUUGAGUGCUGAUAUUUUGGCUUGAAAAUAAGAGGCCGU",
"ACGGAAUUUUACGUAUUUAUCCGUUUUGUCUGUAUCGCGAAGUUUGGAGUCGUUUUUGUUGAAGCGAUUCCACGCAUUUUC-GAGUACUGAUAUUUUGGCUUGACAAUAAGAGGCCGU"
] |
URS000005EC5E_3702_18-187 | GAGGACUUACAUGGCCUCAAGUCACCUGUGGUGUUGUGCAAGAAGGAGAAGCAAAGUCUGUCUAUGUAUUAUGAGAUAGCUACUUCUAUGGCUAGGAUAUAUGUUGUACAAGACCGGCUUUUCUUCUACUUCUUGCACAACCUGAGGUUAUUGAGGCUAUACAAGUCUUC | ((((((((..((((((((((...((((.(((.((((((((((((..(((((.((((((.((((.(((((......(((.((.............)).))).....))))))))).)))))).)))))..)))))))))))))))))))..))))))))))..)))))))) | [
"URS000005EC5E_3702/18-187",
"URS0000D5032D_59689/1-167"
] | [
"GAGGACUUACAUGGCCUCAAGUCACCUGUGGUGUUGUGCAAGAAGGAGAAGCAAAGUCUGUCUAUGUAUUAUGAGAUAGCUACUUCUAUGGCUAGGAUAUAUGUUGUACAAGACCGGCUUUUCUUCUACUUCUUGCACAACCUGAGGUUAUUGAGGCUAUACAAGUCUUC",
"GAGGACUUCCAUGGCCUCAAUCCACCUCCGGUGUUGUGCAAGAAUGAGAAGCAAAGCCUGUCUAUGUAUUGUGAGAUAUCUACUUCUAUGACUAGGAUAUAU---GUACAAGACCGGCUUUUCUUCUUCUUCUUGCACA... |
URS00000A314E_7237_1-85 | GGGCUUAUAUUUGUAUUUUUGCUCGGACAUUUAUGUACAAUUUGAGCGUCAUAGAUGGUUGCAGCAUAAAUAGAAUUAUUAGCCC | (((((.(((.((.(((((.((((((..((((((((.((.........))))))))))..)).)))).))))).)).))).))))) | [
"URS00000A314E_7237/1-85",
"URS00000BD7E2_7237/1-85"
] | [
"GGGCUUAUAUUUGUAUUUUUGCUCGGACAUUUAUGUACAAUUUGAGCGUCAUAGAUGGUUGCAGCAUAAAUAGAAUUAUUAGCCC",
"GGGCUUAUAUUUGUAUUUUUGCUCGGACAUUUAUGUACAAUUUGAACGUCAUAGAUGGUUGCAGCAUAAAUAGAAUUAUUAGCCC"
] |
URS00000A61A1_4530_8-76 | CCGAGCCUUGCUCGCCGGGGCUGCGUGCCGCCAUAGCUGGCGCGCAUCCCCGUCGAGCGUUGCUCGACG | .(((((..((((((.(((((.((((((((((....)).)))))))).))))).))))))..)))))... | [
"URS00000A61A1_4530/8-76",
"URS0000D50E16_4530/1-69"
] | [
"CCGAGCCUUGCUCGCCGGGGCUGCGUGCCGCCAUAGCUGGCGCGCAUCCCCGUCGAGCGUUGCUCGACG",
"CCGAGCCUUGCUCGCCGGGGCUGCGUGCCGCCAUAGCUGGUGCGCAUCCCCGUCGAGCGUUGCUCGACG"
] |
URS00000D979E_7227_9-93 | UGCAGUGCCGCGGCAUUGGUGAGGCCAUCUCCAAUGGAUUAGUUCUCAACAUUGGAUUAGUUAUCAUCAAUGCCGGUGCACUGCA | ((((((((..((((((((((((...(...(((((((.............)))))))...)...))))))))))))..)))))))) | [
"URS00000D979E_7227/9-93",
"URS0000D511B1_7240/5-89"
] | [
"UGCAGUGCCGCGGCAUUGGUGAGGCCAUCUCCAAUGGAUUAGUUCUCAACAUUGGAUUAGUUAUCAUCAAUGCCGGUGCACUGCA",
"UGCAGUGUCGUGGCAUUGGUGAGGACAUCUCCAAUGGAUUGGUUCUCAUCAUUGGAUUAGUUAUCAUCAAUGCCGGUGCACUGCA"
] |
URS00000E2E1E_7220_1-69 | GCUUCGGUUCGUACCAGGAGCAAUUCUGCAUUUUUUUUAAGCUAGUAUUGCACUUGAGACGGCCGGAUU | ..((((((.(((..((((.(((((.(((..............))).))))).))))..))))))))).. | [
"URS00000E2E1E_7220/1-69",
"URS000046AFFA_7238/1-66",
"URS000046AFFA_7240/1-66",
"URS0000002AFF_7220/1-66",
"URS00005759AE_7245/1-67",
"URS00001266DB_7227/1-66"
] | [
"GCUUCGGUUCGUACCAGGAGCAAUUCUGCAUUUUUUUUAAGCUAGUAUUGCACUUGAGACGGCCGGAUU",
"GUUUUGGUUCGUCACAAGGGCAAUUCUGCAUUUUU---AAACUUGUAUUGCACUUGAGACGGCCGAAUU",
"GUUUUGGUUCGUCACAAGGGCAAUUCUGCAUUUUU---AAACUUGUAUUGCACUUGAGACGGCCGAAUU",
"GCUUCGGUUCGUACCAGGAGCAAUUCUGCAUUUUU---AAGCUAGUAUUGCACUUGAGACGGCCGGAUU",
"GCUUCGGUUCGUCCC... |
URS00000E9C11_7227_10-86 | CUGUUGCAGCUAGCGGGUGUUUUAUUUGGUAGCUGUAAUGAUUUGAAUCUAUCAUAAGACACACGCGGCUAUAACCG | (.((((.((((.(((..((.(((...(((((..................)))))..)))))..))))))).)))).) | [
"URS00000E9C11_7227/10-86",
"URS0000D51EA2_7240/22-98",
"URS000046C7A4_7237/6-82",
"URS0000D521DE_7244/22-98"
] | [
"CUGUUGCAGCU-AGCGGGUGUUUUAUUUGGUAGCUGUAAU----GAUUUGAAUCUAUCAUAAGACACACGCGGCUAUAACCG",
"CUGUUGCAGCU-AGCGGGUGUUUUAUUUGGUAGCUGAAUU----GAUUUGAAUCUAUCAUAAGACACACGCGGCUAUAACCG",
"CUGUUGCAGCU-AGCGGGUGUUUUAUCUGGUAGCUGUACC----CUUUUGAAUCUAUCAUAAGACACACGCGGCUAUGACCG",
"CUGUUGUAGCC-AGCGGAUGUUUUAUUUGGUAGUUGCGCU----UUAUUAA... |
URS000011B06F_7237_23-107 | GCACAUUCGUGCUAUAUGGCACACAGUUGAUUUAUAUUAUUUUCUAGUUCAUAAGUCUGUUGAGUGCCAUAGAGCAAGAAGUGUG | .(((((((.((((.((((((((.(((..(((((((((((.....))))..)))))))..))).)))))))).)))).).)))))) | [
"URS000011B06F_7237/23-107",
"URS00003F7D46_7237/1-85"
] | [
"GCACAUUCGUGCUAUAUGGCACACAGUUGAUUUAUAUUAUUUUCUAGUUCAUAAGUCUGUUGAGUGCCAUAGAGCAAGAAGUGUG",
"UCACAUUCGUGCUAUAUGGCACACAGUUGAUUUAUAUUAUUUUCUAGUUCAUAAGUCUGUUGAGUGCCAUAGAGCAAGAAGUGUG"
] |
URS0000127E4C_7237_7-100 | UUUGGUUCUAUGUUCUUAGUACUUGGGUUGAUAAAGACCACUCGUAGUGUGAGAAGCCUUUGUCAUCGCGGGUAUUAUGCAACAUAGCUCAAAA | (((.(..((((((((.((((((((..(.((((((((.(..(((.......)))..).)))))))).)..)))))))).).)))))))..).))) | [
"URS0000127E4C_7237/7-100",
"URS00004FFFD6_7227/5-95",
"URS0000D568A4_7240/1-91"
] | [
"UUUGGUUCUAUGUUCUUAGUACUUGGGUUGAUAAAGACCACUCGUAGUGUGAGAAGCCUUUGUCAUCGCGGGUAUUAUGCAACAUAGCUCAAAA",
"CUUUGUUCUAUAUUCUUAGUACUCGGGUUGAUAAAGACCUUUUCUU---CAGGGAGCCUUUGUCAUCGGGGGUAUUAUGAAAUAUAGUUUAAAG",
"CUUUGUUCUAUAUUCUUAGUACUCGGGUUGAUAAAGACCUUUUCUU---UGCGGAGCCUUUGUCAUCGGGGGUAUUAUGAAAUAUAGUUUAAAG"
] |
URS000012B326_4530_19-129 | UUAGCCAAGAAUGGCUUGCCUAUCUCCACUAUUUGGUUCAUCACUGGAACACACUUGGGGUUCUCAGAUGGUGGAUGAAAUAUGGAAGAUGGUGAGCCUUCCUGGCUAAGA | (((((((.(((.((.(((((....((((..((((.((((((((.........................)))))))).)))).))))....))))).))))).))))))).. | [
"URS000012B326_4530/19-129",
"URS000075B52F_4577/1-101",
"URS00007B5944_4558/1-104",
"URS000079F8BC_4558/1-105"
] | [
"UUAGCCAAGAAUGGCUUGCCUAUCUCCACUAUUU--GGUUCAUCACUG-------GAACACACUUGGGG-----UUCUCAGAUGGUGGAUGAA--AUAUGGAAG-AUGG-UGAGCCUUCCUGGCUAAGA",
"UUAGCCAAGAAUGGCUUGCCUAUCUCCAUUAUUU--UGUUCAUCGCAG-------GAA---GCCCUU--------CC----GUGAUGGAUGAA--AUGUGGAUG-AUGG-CAUCCAUUCUUGGCUAAGU",
"UUAGCCAAGAAUGGCUUGCCUAUCUCCAUUAUUU--UGUUCAUCG... |
URS000013DD1A_7244_1-81 | UUGCAAUUAGUUUCUUUGGUCGUCCAGCCUUAGGUGAUUUCUCUGAUCAUAAAGCUAGACAACCAUUGAAGUUCGUUGUGG | ..(((((.((((((..((((.(((.(((.((((((..........))).))).))).))).))))..)))))).))))).. | [
"URS000013DD1A_7244/1-81",
"URS000013DD1A_7260/1-81",
"URS000013DD1A_7234/1-81",
"URS000013DD1A_7230/1-81",
"URS000013DD1A_7222/1-81",
"URS000013DD1A_7237/1-81",
"URS0000027D55_7217/1-81",
"URS000022C38E_7220/1-81",
"URS000022C38E_7245/1-81",
"URS00001A7C1E_7238/1-81"
] | [
"UUGCAAUUAGUUUCUUUGGUCGUCCAGCCUUAGGUGAUUUCUCUGAUCAUAAAGCUAGACAACCAUUGAAGUUCGUUGUGG",
"UUGCAAUUAGUUUCUUUGGUCGUCCAGCCUUAGGUGAUUUCUCUGAUCAUAAAGCUAGACAACCAUUGAAGUUCGUUGUGG",
"UUGCAAUUAGUUUCUUUGGUCGUCCAGCCUUAGGUGAUUUCUCUGAUCAUAAAGCUAGACAACCAUUGAAGUUCGUUGUGG",
"UUGCAAUUAGUUUCUUUGGUCGUCCAGCCUUAGGUGAUUUCUCUGAUCAUAAAG... |
URS000014472D_7227_8-86 | AGCUUCCUUAAGUAGUAUCCAUUAAAGGGUUGUUCUCAACAUGCAAAUCAACCUUUUGAUGUACUACUUUAAGAAUCUC | ...(((.(.((((((((..(((((((((((((................))))))))))))))))))))).).))).... | [
"URS000014472D_7227/8-86",
"URS0000D5480F_7240/12-90",
"URS00003C22B9_7237/19-96"
] | [
"AGCUUCCUUAAGUAGUAUCCAUUAAAGGGUUGUUCUCAACAUGCAAAUCAACCUUUUGAUGUACUACUUUAAGAAUCUC",
"AGCUUCCUUAAGUAGUAUCCAUUAAAGGGUUGUUCUCAACAUGCAAAUCAACCGUUUGAUGUACUACUUUAGGAAUCUA",
"AGCUUCCUUAAGUAGUAUCCAUUAAGAGGUCGUCAUCUAGCUA-AAAUCGACCUUUUGAUGUACUACUUUAAAAAAGCA"
] |
URS000016336E_9940_13-89 | UUGGUGGGAGCUCGGAGAGUGGAGCUGUGGGUGUCAGGGUCAGGCACACGCACAGCACCUCACUGAGCUCCUUCCAA | .(((.((((((((((.(((.(..((((((.(((((........).)))).)))))).)))).)))))))))).))). | [
"URS000016336E_9940/13-89",
"URS000075E755_9913/1-77"
] | [
"UUGGUGGGAGCUCGGAGAGUGGAGCUGUGGGUGUCAGGGUCAGGCACACGCACAGCACCUCACUGAGCUCCUUCCAA",
"UUGGUGGGAGCUCGGAGAGUGCAGCUGUGGGUGUCAGGGUCAGGCACACGCACAGCACCUCACUGAGCUCCUUCCAA"
] |
URS000018B0EE_9606_1-76 | GAGGGGGAAGACGGGAGGAAAGAAGGGAGUGGUUCCAUCACGCCUCCUCACUCCUCUCCUCCCGUCUUCUCCUCUC | ...(((((((((((((((...(.((((.(((.................)))))))).))))))))))))))).... | [
"URS000018B0EE_9606/1-76",
"URS00007E3880_9796/29-103",
"URS000075D534_9913/1-68",
"URS000075D534_9925/1-68",
"URS000075E55F_9593/14-89",
"URS000075A74F_10090/1-73",
"URS000075A74F_10116/1-73"
] | [
"GAGGGGGAAGACGGGAGGAAAGAAGGGAGUGGUUCCAUCACGCCUCCUCACUCCUCUCCUCCCGUCUUCUCCUCUC",
"GCGGGGGAGGACGGGAGGGGAGGAGGGCGUGGUUUU-AUGCAGCUCCUCACUCCUCUCCUCCCGUCUUCUUCUUCU",
"---GGGGAGGGCGGGAAGAAAGGAGGGCGUGGUCU--GUGCAGCUCCUCACUCCUCUCCUCCCGUCUUCUCCU---",
"---GGGGAGGGCGGGAAGAAAGGAGGGCGUGGUCU--GUGCAGCUCCUCACUCCUCUCCUCCCGUCUUC... |
URS00001FE045_3702_49-145 | CUUAUAGCUUGGCAAUCUCAUGUCAAAUAAGGAAAAGAAGAGGAACCCAAGGUAUGUUUCUCAUCUACCUUCUUUGACAUGGGACUGCCUAAGCUAA | .....(((((((((.((((((((((((.((((.(.(...(((((((.........))))))).).).)))).)))))))))))).)))).))))).. | [
"URS00001FE045_3702/49-145",
"URS0000D51337_59689/23-118"
] | [
"CUUAUAGCUUGGCAAUCUCAUGUCAAAUAAGGAAAAGAAGAGGAACCCAAGGUAUGUUUCUCAUCUACCUUCUUUGACAUGGGACUGCCUAAGCUAA",
"UAUAUAGCUUGGCAAUCCCAUGUCAAAUAAGGCAAAGAAGAGGAACCCAAGGUAUGUUUCUCAUUUGCCUUCUUUGACAUGGGACUAAC-AGACUAA"
] |
URS0000241A79_4530_1-100 | ACCACUGCAGACUUAAUCUGGACACUAUAAAAGAAAAUUGUGCAUGUGAAAAUAUGCCCAUUAUAAAUUUGUAGUGUUCAGAUUGAGUUUAGAAUGGUUG | ((((....(((((((((((((((((((((((.......((..(((((....)))))..)).......)))))))))))))))))))))))....)))).. | [
"URS0000241A79_4530/1-100",
"URS00007E40A8_15368/3-98"
] | [
"ACCACUGCAGACUUAAUCUGGACACUAUAAAAGAAAAUUGUGCAUGUGAAAAUAUGCCCAUUAUAAAUUUGUAGUGUUCAGAUUGAGUUUAGAAUGGUUG",
"ACUAUUGCAAACUUAGUCUGAACACUAUAAAAAA----UGCUCAUGUAAAAAUAUGCGCAUCAUAGAUUUGUAGUGUUCAGAUUGAGUUUACAGUAGUUG"
] |
URS000029ABD5_7227_11-100 | UUGGUCCAACUUGCCUUAGAAUAGGGGAGCUUAACUUAUGUUUUUGAUGUUUAAGUUAAAAGCCUCUGUUCUAAGACAAUUUGAUGAUCA | .((((((((.(((.(((((((((((((...((((((((.............))))))))...))))))))))))).))).)))..))))) | [
"URS000029ABD5_7227/11-100",
"URS0000D4F059_7240/1-90"
] | [
"UUGGUCCAACUUGCCUUAGAAUAGGGGAGCUUAACUUAUGUUUUUGAUGUUUAAGUUAAAAGCCUCUGUUCUAAGACAAUUUGAUGAUCA",
"UUGGUCCAACUUGCCUUAGAAUAGGGGAGCUUAACUUGUGUUUUUAAUGUUUAAGUUAAAAGCCACUGUUCUAAGACAAUUUGAUGAUCA"
] |
URS00002AEED4_7227_3-92 | UGGAGAGCAGAGAUACCUCUGGAGAAGCGCGUGACCUGACCCCAGCAGGAGAACCCAACCCGCUUUUCCACCUAGGUGUCUCUCUCUCUC | .((((((.((((((((((.((((((((((.((..((((.......))))........)).))))))))))...)))))))))))))))). | [
"URS00002AEED4_7227/3-92",
"URS0000D5571B_7240/7-96"
] | [
"UGGAGAGCAGAGAUACCUCUGGAGAAGCGCGUGACCUGACCCCAGCAGGAGAACCCAACCCGCUUUUCCACCUAGGUGUCUCUCUCUCUC",
"UGGAGAGCAGAGAUACCUCCGGAGAAGCGCGUGACCUGACCCCAGCAGGAGAACCCAACCCGCUUUUCCGCCUAGGUGUCUCUCUCUCUC"
] |
URS00002B271E_7227_1-89 | UAGAAAUUAUAUAUUUAAGUAGUGGAUACAAAGGGCGAUUUGAUAUAAAAGUGUCGCAUUGUAUGACCUACUUAACUAGCUGAUUUUGU | ..(((((((..((.((((((((...((((((..(..(................)..).))))))...)))))))).))..))))))).. | [
"URS00002B271E_7227/1-89",
"URS0000D4F17C_7240/10-98"
] | [
"UAGAAAUUAUAUAUUUAAGUAGUGGAUACAAAGGGCGAUUUGAUAUAAAAGUGUCGCAUUGUAUGACCUACUUAACUAGCUGAUUUUGU",
"UAGAAAUUAUAUAUUUAAGUAGUGGAUACAAAAGGCGAUUUGAUAUAAAAGUAUCGCAUUGUAUGGCCUACUUAACUAGCUGAUUUUGU"
] |
URS00002C60D2_7227_5-90 | GCGGCACAAUCUGCAAUCUACGCCACUGGCUUACGUUGCAAUCGAAAAUCGUGUCCAGUGCCGUAAAUUGCAGUUGUGUGAACGCA | (((((((((.(((((((.((((.((((((..((((..............)))).)))))).)))).)))))))))))))...))). | [
"URS00002C60D2_7227/5-90",
"URS0000D55E6F_7240/1-86"
] | [
"GCGGCACAAUCUGCAAUCUACGCCACUGGCUUACGUUGCAAUCGAAAAUCGUGUCCAGUGCCGUAAAUUGCAGUUGUGUGAACGCA",
"GCGGCACAAUCUGCAAUCUACGCCACUGGCUUACGUUGUGGUCGAGAAUCGUGUCCAGUGCCGUAUAUUGCAGUUGUGUGGACGCA"
] |
URS00002DDBA0_6239_1-83 | GGGCAAAAGUUGGGCAAGACUCUGGCAAAACUUGGAUUUAUGCUGCGCCAAAGUUUAACCCAAGUUUGACCCAACUCUUGUCA | .(((((.(((((((..(((((..((..((((((.................))))))..))..)))))..))))))).))))). | [
"URS00002DDBA0_6239/1-83",
"URS000028FA37_6239/12-83"
] | [
"GGGCAAAAGUUGGGCAAGACUCUGGCAAAACUUGGAUUUAUGCUGCGCCAAAGUUUAACCCAAGUUUGACCCAACUCUUGUCA",
"GGGCAAAAGUUAGGCAAGACUUUGGCAAAGCUUGAA-----------UCCAAGUUUUGCCAAAGUUUUGCCCAACUUUUGCCC"
] |
URS00002EE47A_7165_8-88 | GGACGGCCAGAGCUAAUUGGAGUAUUUCUUGAGGAAUAUUUUUGACAAGCUCAUGAAAUCUUUGAUUAGGUCUGGUUAUUC | .((.(((((((.((((((((((.(.(((.((((...(.((...)).)..)))).))).))))))))))).))))))).)). | [
"URS00002EE47A_7165/8-88",
"URS0000D4F7FB_7159/7-84",
"URS0000D5453F_7176/1-77"
] | [
"GGACGGCCAGAGCUAAUUGGAGUAUUUCUUGAGGAAUAUUUUUGACAAGCUCAUGAAAUCUUUGAUUAGGUCUGGUUAUUC",
"AUACGGCUAGAGCUAAUUGGAG-AGUUCUUGAAUAGUGUUGUGAACC--UUCAUGAAAUCUUUGAUUAGGUCUGGUCGUGG",
"-UACGGCCAGAGCUAAUUGGAG-ACUUCUUGAAUCGUGUUGUGAACA--GUCAUGAAAUCUUUGAUUAGGUCUGGUUGUGG"
] |
URS0000304A6A_10376_7-92 | UCAGGUGUGGAAUUUAGAUAGAGUGGGUGUGUGCUCUUGUUUAAUUACACCAAGAUCACCACCCUCUAUCCAUAUCCCACAAUUGA | ((((..((((......(((((...(((((.(((.(((((...........))))).)))))))).)))))......))))..)))) | [
"URS0000304A6A_10376/7-92",
"URS0000D502BE_45455/1-86"
] | [
"UCAGGUGUGGAAUU-UAGAUAGAGUGGGUGUGUGCUCUUGUUUAAUUACACCAAGAUCACCACCCUCUAUCCAUAUCCCACAAUUGA",
"UCAGGUGUGGAAUUAUAGAUAGCGUGGGUGUGUGACCUUGUUUG-UUACACAAAGAUCACCACCCCCUGUCUGCUUUCCACUCCUGA"
] |
URS000031426F_7227_4-85 | GUCUAAUCUAAAACAAGGUAAAUAUCAGGUUGUUUCCUGUAUUCGAUCGAAACAUCUGUAUAUACCUUUGUUCCGAUUGGAC | ((((((((...(((((((((.(((.(((((.(((((............))))))))))))).)))).)))))..)))))))) | [
"URS000031426F_7227/4-85",
"URS0000D4F98C_7240/18-99"
] | [
"GUCUAAUCUAAAACAAGGUAAAUAUCAGGUUGUUUCCUGUAUUCGAUCGAAACAUCUGUAUAUACCUUUGUUCCGAUUGGAC",
"GUCUAAUCUAAAACAAGGUAAAUAUCAGGUUGUUUCCUGUAUUAGAUCGAAACAUCUGUAUAUACCUUUGAUCCGGUUGGAC"
] |
URS0000347D32_7227_8-88 | UAAUCAACUCCAUCGUGCAGAGGUUUGAGUGUCCUGUGUUUUGCCUAAUCGCAUUCAAUUUCUGAACGGUAGAGAUGGUAC | ..((((.(((.(((((.((((((((.((((((..................)))))))))))))).))))).))).)))).. | [
"URS0000347D32_7227/8-88",
"URS0000D55C48_7240/15-95"
] | [
"UAAUCAACUCCAUCGUGCAGAGGUUUGAGUGUCCUGUGUUUUGCCUAAUCGCAUUCAAUUUCUGAACGGUAGAGAUGGUAC",
"UAAUCAACUCCAUCGUGCAGAGGUUUGAGUGUCCUGUGUUUUGCCUAAUCGCAUUCAAUUUCUGCACGGUAGAGAUGGUAC"
] |
URS000034D4E9_7237_2-86 | AUUUGCAUUUCAAUUUAGAAACACAAAUCAUGUGUGGUAUGUUUUAACUCAUACAUAACUUGUGUCUCUUAGAUCAAAUGUGAGU | ((((((((((.(.((((((.((((((...(((((((((........)).)))))))...)))))).))).)))).)))))))))) | [
"URS000034D4E9_7237/2-86",
"URS0000516D77_7237/1-83",
"URS000012D3D9_7237/1-82"
] | [
"AUUUGCAUUUCAAUUUAGAAACACAAAUCAUGUGUGGUAUGUUUUAACUCAUACAUAACUUGUGUCUCUUAGAUCAAAUGUGAGU",
"AUUUGCAUUUGGCUUUAGAAACACAAAGCAUGUGUGGUAU--UUUAACUCAUACAUAACUUGUGUCUCUUAGAUCAAAUGUGAGU",
"AUUUGCAUUUGGCUUUAGAAACACAAAGCAUGUGUGGUAU--UUCAACUCAUACAUAUCUUGUGUUUCU-AGAUCAAAUGUGAGU"
] |
URS000036A1AD_7237_1-68 | AAUUUCUGGUCUCUCCAUUUGGUAUUGCGUUUGUUGUAUACGCAAUACAAAAUGGAGAGACCAGAAAU | .(((((((((((((((((((.(((((((((.........))))))))).))))))))))))))))))) | [
"URS000036A1AD_7237/1-68",
"URS000011E79B_7237/27-94"
] | [
"AAUUUCUGGUCUCUCCAUUUGGUAUUGCGUUUGUUGUAUACGCAAUACAAAAUGGAGAGACCAGAAAU",
"AAUUUCUGGACUCUCCAUUUUGUAUUGCGUAUACAACAAACGCAAUACAAAAUGGAGAGACCAGAAAU"
] |
URS00003A071C_7237_1-83 | UUUUCAGUUUUUUACCAGGUUAGAUUUGCGAAACGUUGAAUUUAGGUCGUAUCACAAUUCUAGCCUGGCAAUUUUGCUUGAAA | ((((.(((...((.((((((((((.(((.((.(((............))).)).))).)))))))))).))....))).)))) | [
"URS00003A071C_7237/1-83",
"URS0000460BDD_7237/1-83"
] | [
"UUUUCAGUUUUUUACCAGGUUAGAUUUGCGAAACGUUGAAUUU---AGGUCGUAUCACAAUUCUAGCCUGGCAAUUUUGCUUGAAA",
"UUUUCAGUUUUUUACCAGGUUAGAUUUGCGAAACGUUGAAUUU---AGCUCGUCUCACAGCUCUAACCUGGCAAUUUUGCUUGAGA"
] |
URS00003B07E6_6182_1-78 | ACCUUUUGCACCGCAGUCAAUAUUGGCUGAUGGCAUUGUUUUAUUGUCACAGCCAGUAUUGAUGAACGGGGUAAUAGG | .(((.((((.(((..((((((((((((((.(((((.........)))))))))))))))))))...))).)))).))) | [
"URS00003B07E6_6182/1-78",
"URS0000D53B54_6183/1-78"
] | [
"ACCUUUUGCACCGCAGUCAAUAUUGGCUGAUGGCAUUGUUUUAUUGUCACAGCCAGUAUUGAUGAACGGGGUAAUAGG",
"ACCUCUUGCGCCGCAGUCAAUAUUGGCUGAAGGCAUUGCUUUAUUGUCACAGCCAGUAUUGAUGAACGGUGUAAAAGG"
] |
URS00003CAC5F_31234_15-76 | ACAGUUCCCACAGGGCUUUCCACACUCAUUGAGAAGCGUUGAAAGACUGAUGGGUCCUGGGA | .(((..(((((((..(((((.((.((........)).)).))))).))).))))..)))... | [
"URS00003CAC5F_31234/15-76",
"URS0000D562C5_31234/1-61"
] | [
"ACAGUUCCCACAGGGCUUUCCACACUCAUUGAGAAGCGUUGAAAGACUGAUGGGUCCUGGGA",
"ACAGUUCCAACAGUUCUUUCCACACUCACAAAGAAGCGUUGAAAGACUAUUCGGG-CUGGGA"
] |
URS00003D56C0_7227_1-95 | GCAAUAAGUUAGACGUGAGUAUGGCUAUACAAAUCAUCUGGAACGUAAGUUCUAAUGUAUGUAUUGUAUGUUGUAUUUGCAGUUUUAUGAUAGCA | ((.((..((.(((((((((((((((.((((((..((((((((((....))))))..).)))..))))))))))))))))).)))).)).)).)). | [
"URS00003D56C0_7227/1-95",
"URS0000D549F2_7240/1-95"
] | [
"GCAAUAAGUUAGACGUGAGUAUGGCUAUACAAAUCAUCUGGAACGUAAGUUCUAAUGUAUGUAUUGUAUGUUGUAUUUGCAGUUUUAUGAUAGCA",
"GCAAUAAGUUAGACGUGAGUAUGGCUAUACAAAUCAUCUGGAACAUACGUUCUAAUGCAUGUAUUGUAUGUUGUAUUUGCAGUUUUAUGAUAGCA"
] |
URS00003D5D26_3702_52-154 | GCAAAUAAAGAUUUGCUUCGCAGGAGAGAUAGCGCCAUCACCUCUUCUAAGAAGUUAACUAGUGGUGACGGUAUCUCUCCUACGUAGCAAUCCUUAUAUAUGC | (((.((((((..(((((.((.((((((((((.((.((((((..((((...)))).......)))))).)).)))))))))).)).)))))..))).))).))) | [
"URS00003D5D26_3702/52-154",
"URS000079365F_59689/1-103"
] | [
"GCAAAUAAAGAUUUGCUUCGCAGGAGAGAUAGCGCCAUCACCUCUUCUAAGAAGUUAACUAGUGGUGACGGUAUCUCUCCUACGUAGCAAUCCUUAUAUAUGC",
"GCAAACAAAGAUUUGCUUCGCAGGAGAGAUAGCGCCACCACCUCUUCUAAGAAGUUAACCAGUGGUGACGGUAUCUCUCCUACGUAGCAAUCCUUAUAUAUGC"
] |
URS0000402C3B_7237_5-86 | CCCAUCGCUCGCUGUAAAUUGUAAUGGCCAAAGCUUUUUUGUUGGUAGCAGCUUGGUGUUACUUCUUACAGUGAGUGUGGAG | .....((((((((.(((.........((((.(((................)))))))........))).))))))))..... | [
"URS0000402C3B_7237/5-86",
"URS000047E821_7227/10-89"
] | [
"CCCAUCGCUCGCUGUAAAUUGUAAUGGCCAAAGCUUUUUUGUUGGUAGCAGCUUGGUGUUACUUCUUACAGUGAGUGUGGAG",
"GGCAUCGCUCGCUGUAAAUUGUAAUCAUCAAAGCGUUUUC--UCAGAGCCGCUUGGUGUUACUUCUUACAGUGAGUGUGCCA"
] |
URS0000452CF5_4530_16-146 | UAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAGGAAACCCCAUUCCCAUAAAUUCAGUAUCCAAAGAUGGUUGUUGUAUCUAUGGGAAUAAGGGUUCCCUAACGAAAUGAUCUUGGACGCAAUCUAGGAGU | ..(((((((((((.((((((((((((((.(((((.(((((.(((((((((.((.(((((.(((....))).))))).)).)))))))))..))))).))))).)))))))))))))).))))))))))).. | [
"URS0000452CF5_4530/16-146",
"URS0000D4FE59_4530/1-129",
"URS0000D504E9_4530/5-135",
"URS0000D53017_4530/16-145",
"URS0000D535A6_4530/16-146",
"URS0000D4F687_4530/15-144",
"URS000001C56B_4530/18-144",
"URS0000D54501_4530/30-160"
] | [
"UAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAGGAAACCCCAUUCCCAUAAAUUCAGUAUCCAAAGAUGGUUGUUGUAUCUAUGGGAAUAAGGGUUCCCUAACGAAAUGAUCUUGGACGCAAUCUAGGAGU",
"UAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAGGGAACCCCAUUCCCAUAAAUUCAGUAUCCAAAGCUGGUUGUUGUAUCUAUGGGAA--AGGGUUCCCUAACGAAAUGAUCUUGGACGCAAUCUAGGAGU",
"UAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAGGGAACCCC... |
URS000045A3AF_10376_5-84 | GGAGUGUCCCGGGGCCACCUCUUUGGUUCUGUACAUAUUUUGUUAUUGUACAUAACCAUGGAGUUGGCUGUGGUGCACUC | .((((((.(((.(((((.((((.(((((.((((((((......)).)))))).))))).)))).))))).))).)))))) | [
"URS000045A3AF_10376/5-84",
"URS0000D4F9EB_45455/1-80"
] | [
"GGAGUGUCCCGGGGCCACCUCUUUGGUUCUGUACAUAUUUUGUUAUUGUACAUAACCAUGGAGUUGGCUGUGGUGCACUC",
"GGAGUGACCCGGAGCCGCCUCCUUGGUUCUGUCCACAUUUUGUUGCUGCACAUAACCAUGGAGGUGGUUGCGGUGCAGCC"
] |
URS000048DF54_7227_1-93 | GGGUUUUGUACCACAUUCUGAGUAUUCCAGAUUGCAUAGCUUUGUGCUACUAUUGCUAUACGGUCUGGGACACUUUUAACAUGGUAUCAAAUC | .(((((.((((((..((..((((.((((((((((.(((((..((......))..))))).)))))))))).))))..))..)))))).))))) | [
"URS000048DF54_7227/1-93",
"URS0000D50A27_7240/2-94"
] | [
"GGGUUUUGUACCACAUUCUGAGUAUUCCAGAUUGCAUAGCUUUGUGCUACUAUUGCUAUACGGUCUGGGACACUUUUAACAUGGUAUCAAAUC",
"GGGUUUUGUACCACAUUCAGAGUAUUCCAGGUUGCAUAGCUUUGUGCUACUAUUGCUGUACGAUCUGGGACACUUUUAACAUGGUAUCAAAUC"
] |
URS000049968D_7237_5-96 | CGGUGUGUAUUUGGCAAGUAGAAUAGCAGGCUUAUCACAUGUUCCAUUCAAUCCGCUGUGAGAUUCUUCUAUUCUACUUUCGACAAACACCC | .(((((.....(((.(((((((((((.(((....(((((.((............)))))))....)))))))))))))))))....))))). | [
"URS000049968D_7237/5-96",
"URS000015603F_7227/1-90",
"URS0000D509D3_7240/1-91",
"URS0000D507F9_7244/6-96"
] | [
"CGGUGUGUAUUUGGCAAGUAGAAUAGCAGGCUUAUCACAUGUUCCAUUCAAUCCGCUGUGAGAUUCUUCUAUUCUACUUUCGACAAACACCC",
"-GGCGUGUCUAUGGCAAGUAGAAUAGCAGGCUUAUCACAUGUUUAAUUCAAUCUGCUGUGAGAUUCUUCUAUUCUACUUUCGACAA-CACCC",
"CGGCGUGUCUUUGGCAAGUAGAAUAGCAGGCUUAUCACAUGUUCAAUUCAAUCUGCUGUGAGAUUCUUCUAUUCUACUUUCGACAA-CACCC",
"CGGUGUGGAU-UGGCAAGUAG... |
URS00004BBFF4_7237_1-116 | CCUGCCAGAGAGGGCUUUUGGUUUAUCCUAUCUGCUGUGGUUUAUGUACAAUUCGAAAGUCAUAUGCAACGGCAGAUAGGAGCAAUCAUUAGCCACAAAGCCAACUAUCCGUGGGA | (((((...((..(((((((((((..(((((((((((((.((.((((.((.........)))))).)).))))))))))))).........))))).))))))..))....))))). | [
"URS00004BBFF4_7237/1-116",
"URS000046304E_7237/1-116",
"URS00004C550A_7237/1-116"
] | [
"CCUGCCAGAGAGGGCUUUUGGUUUAUCCUAUCUGCUGUGGUUUAUGUACAAUUCGAAAGUCAUAUGCAACGGCAGAUAGGAGCAAUCAUUAGCCACAAAGCCAACUAUCCGUGGGA",
"CCUGCCAGAGAGGGCUUUUGGUUUAUCCUAUGUGCUGUGGCUUAUGUACAAUUCGAAAGACAUAUGCCACGGCGGAUAGGAGCAAUCAUUAGCCACAAAGCCAACUAUCCGUGGGA",
"CCUGCCAGAGAGGGCUUUUGGUUUAUCCUAUGUGCUGUGGCUUAUGUACAAUUCGAAAGUCAUAUGCCACG... |
URS00004BC764_7091_1-67 | GGUCUUAUGCAAGUUUUGUAAAGUGUCACCUUAUUCUGAAGGGAUAUUUUACUCCGCUUGCAAAUUA | (((....(((((((...((((((((((.((((......))))))))))))))...))))))).))). | [
"URS00004BC764_7091/1-67",
"URS000075B69A_7091/4-70"
] | [
"GGUCUUAUGCAAGUUUUGUAAAGUGUCACCUUAUUCUGAAGGGAUAUUUUACUCCGCUUGCAAAUUA",
"GGUCUUAUGCAAGUUUUGUAAAGUGUCACCUUAUUCUGAAGGGAUAUUUUACUCCGCUUACAGAUCA"
] |
URS00004E9C64_6182_1-74 | CAUGUUUGUGAGGUGGAUGUUAGUGCAAUUUAGUGACGUAAAUAUAUUGCACUUACCUUCGCCUUGCAAAUAUA | .((((((((((((((((.((.((((((((.((..........)).)))))))).)).)))))))))))))))). | [
"URS00004E9C64_6182/1-74",
"URS0000D51581_6183/1-74"
] | [
"CAUGUUUGUGAGGUGGAUGUUAGUGCAAUUUAGUGACGUAAAUAUAUUGCACUUACCUUCGCCUUGCAAAUAUA",
"CAUGUUUGUGAGGGGGAUGUUUGUGCAAUUUAGUGUUGUAAAUAUAUUGCACUAACCUUCGCCUUGCAAAUAUA"
] |
URS000050D395_4530_9-126 | GCCCGUCACAGGUAUCUAGUCACCUGUGACGGGCCGAGAAUGGAAUCCGUCAAAGGAACACACCUUUGUCAGAUUCUACUUCCUGCCCAUCACAGGUGACUAGAUACCUGUGACGGGC | ..(((((((((((((((((((((((((((.(((....((.(((((((.(.(((((........))))).).))))))).))....))).))))))))))))))))))))))))))).. | [
"URS000050D395_4530/9-126",
"URS000037D3CA_4530/1-116"
] | [
"GCCCGUCACAGGUAUCUAGUCACCUGUGACGGGCCGAGAAUGGAAUCCGUCAAAGGAACACACCUUUGUCAGAUUCUACUUCCUGCCCAUCACAGGUGACUAGAUACCUGUGACGGGC",
"ACCCGUCACUGGUAUCUAGUCACCUGUGACGGGCCGAGAAUGGAACCCGUCAAAGGGACAC--CUCUGACGGGUUCCAUUCUCGAUCCGUCACAGGUGACUAGAUGCCUGUGACGGCC"
] |
URS000052D657_7237_1-118 | UCCUCCUCAAGGAGGAAAUUCUUCUACUGCGCGAGGGCAUAGGGCAGAUUCUCAAUAUUCCCUGGGCUCUGCUGUCCGAUGCCCUCACGCAGUACAAGAAUUUCCUCCUCGAGGAGGA | ((((((((.((((((((((((((.(((((((.((((((((.((((((...((((........)))).....)))))).)))))))).))))))).)))))))))))))).)))))))) | [
"URS000052D657_7237/1-118",
"URS000035D251_7237/1-117"
] | [
"UCCUCCUCAAGGAGGAAAUUCUUCUACUGCGCGAGGGCAUAGGGCAGAUUCUCAAUAUUCCCUGGGCUCUGCUGUCCGAUGCCCUCACGCAGUACAAGAAUUUCCUCCUCGAGGAGGA",
"UCCUCCUCAAGGAGUAAAUG-UUCUACUGCGCGAGGGCAUAGGGCAGAUUCUCAAUAUUCCCUGGGCUCUGCUGUCCGAUGCCCUCACGCAGUACAAGAAUUUCCUCCUCGAGGAGGA"
] |
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