id
stringlengths
12
30
sequence
stringlengths
12
4.38k
secondary_structure
stringlengths
12
4.38k
aligned_ids
listlengths
1
10
aligned_sequences
listlengths
1
10
split
stringclasses
4 values
URS0000D67F40_12908_1-55
UCGGGAUAUCGCAGGCUCCCGACGUCGCAAAGACGGUUCCCCGUCCAAGUCCUGC
((((((....[[[[[.)))))).........(((((....))))).....]]]]]
[ "URS0000D67F40_12908/1-55", "URS0000D687C8_12908/1-47", "URS0000D68D20_12908/1-54", "URS0000D6C5AB_12908/1-48", "URS0000D67201_12908/1-48", "URS0000D6910D_12908/1-54", "URS0000D6786D_12908/1-54", "URS0000D69C6D_12908/1-55", "URS0000D6BA3D_12908/1-55", "URS0000D67692_12908/1-53" ]
[ "-UCGGGAUAUCGCAGGCUCCCGACGUCGCAAAGACGGUU-CCCCGUCCAAGUCCUGC", "---UCGGGCUUGCAGGCGCCCGGU------GAGACGGAUCUUCCGUCCAAGU-CUGC", "CCGGGUCGAUCGCAGGCACCCGGU-CCGAAAAGACGGUU--CCGUCUCAAGCGCUGC", "-CGGGGACGUAGCAGACUCCCCGU------CAGACGGUU--CCCGUCCAAGCUCUGC", "---CGGGGAUCGCAGGCUCCCCAU------CAGACGGCCUCACCGUCCAAGCACUGC", "...
rfam_14_5_mafft
URS0000D67F44_12908_1-121
UUUAAUUACAGGUAGUUAUACGCUGUAUACUUGUGUAACUGAAUUAACGUUUAAGCGAAGUGUAUUCUUCGUCAGUCGCAAGGGGGUCGCUUAAGUUGAUUAGGCGACCCUAUUUUAUUUU
......((((((((....))).)))))..((((((...((((((....)))....(((((......))))).))).))))))(((((((((...........)))))))))..........
[ "URS0000D67F44_12908/1-121", "URS0000D66149_12908/1-120", "URS0000D67731_12908/1-118", "URS0000D668F9_12908/1-119", "URS0000D69782_12908/1-119", "URS0000D68050_12908/1-121" ]
[ "UUUAAUUACAGGUA-GUUAUACGCUGUAUACUUGUGUAACUGAAUUAACGUUUAAGCGAAGUGUAUUCUUCGUCAGUCGCAAGGGGGUCGCUUAAGUUGAUUAGGCGACCCUAUUUUAUUUU", "UUUAAUUACAGGUA-GUUAUACGCUGUAUACUUGUGUAACUGAAUUAACGUUUAAGCGAAGUGUAUUCUUCGUCAGUCGCAAGGGGGUCGCUUAAUUUGAUUAAGCGACCUUAUUUUAUUG-", "UAAAGUUACAGGUAGGUAGUACGCUGUAUACUUGUGUAACUGAAUUAACGUUUAAGCGA...
rfam_14_5_mafft
URS0000D67F48_12908_1-157
AAUCGGCGUACGAUAAGGAGUACGAGUUACUCAUCAUUGAGCCGAGGGGGAUGAGCCUCAGUAACAGCAGUCGCAAGACUGGAAAACUGAAACAUACAUCGUUGGGUAGAGUUUGGUAGGUUUCCCUUUAUUGGGAUUCUCGAAGAAGUUGGGCCCA
..(((((.....((...(((((.....)))))...))...))))).............((((.....(((((....)))))....))))..............((...(..(((........((.........)))........))..)....))..
[ "URS0000D67F48_12908/1-157", "URS0000D67A7E_12908/1-155", "URS0000D67F48_997888/1-157", "URS0000D6B82E_12908/1-157", "URS0000D68A10_12908/1-157", "URS0000D69BE8_12908/1-157", "URS0000D6A31D_12908/1-157", "URS0000D6A6C6_12908/1-147" ]
[ "AAUCGGCGUACGAUAAGGAGUACGAGUUACUCAUCAUUGAGCCGAGGGGGAUGAGCCUCAGUAACAGCAGUCGCAAGACUGGAAAACUGAAACAUACAUCGUUGGGUAGAGUUUGGUAGGUUUCCCUUUAUUGGGAUUCUCGAAGAAGUUGGGCCCA", "AAUCGGCGUACGAUAACGAGUACGAGUUACUCAUCAUUGAGCCGAGGGGGAUGAGCCACAGUAACAGCAGUCGUAAGACUGGAAAACUGAAACAUAUAUCGUCGGGUAGAGUUUGGUAGGUUUCCUGU--UUAGGAUUCUCGAAGAAGUUAG...
rfam_14_5_mafft
URS0000D67F4C_12908_1-127
CGCCUAACCUUUAUAGAUUUUGUCCUAUGAAGUAUGGUUAAAACCCAUCCCUGGUAUUAAACUCCUCGUCAGACCACUCAGGGAUGGGUCUAUAAUCGAAAGGUUAUAGGAUAGUCGAAAGGCUGUC
.(((....((((((((........))))))))...))).....(((((((((((.......................))))))))))).((((((((....))))))))(((((((....)))))))
[ "URS0000D67F4C_12908/1-127", "URS0000D6D421_910047/1-126", "URS0000D6CA7F_12908/1-126", "URS0000D6AFE9_910049/1-126", "URS0000D6AFE9_12908/1-126", "URS0000D6D0C2_12908/1-126", "URS0000D6727C_12908/1-126", "URS0000D669FE_12908/1-127" ]
[ "CGCCUAACCUU-UAUAGAUUUUGUCCUAUGAAGUAUGGUU-AAAACCCAUCCCUGGUAUUAAACUCCUCGUCAGACCACUCAGGGAUGGGUCUAUAAUCGAAAGGUUAUAGGAUAGUCGAAAGGCUGUC", "AGCCUAACCUU-UAUAGAUUU--UCCUAUGAAGCAUGGCCCCAAACCCAUCCCUGAUAUUAAACUCCUCGUCAGACCACUCAGGGAUGGGUCUAUAAUCGAAAGGUUAUAGGAUAGUCGAAAGACUGUC", "CGCCUAACCUU-UAUAGAUUU--UCCUAUGAAGCAUGGCCCCAAA...
rfam_14_5_mafft
URS0000D67F51_12908_1-50
UACUAUAAAGGGGAGUAUUACCCUUUAUAGUAGCAAUGUAUCGUGUAGCA
(((((((((((..........)))))))))))..................
[ "URS0000D67F51_12908/1-50", "URS0000D6BB6E_12908/1-48", "URS0000D663D0_12908/1-49" ]
[ "UACUAUAAAGGGGAGUAUUACCCUUUAUAGUAGCAAUGUAUCGUGUAGCA", "UGCGAU-AGGGGGAGUAUUACCCCCUAUCGUAGCAAUGUAGCA-GUAGCA", "UACUAUAAAGGGGAGUAUUACCCUUUAUAGUAGCAACGUAGCA-GUAGCA" ]
rfam_14_5_mafft
URS0000D67F58_12908_1-62
UUCUUAAUGCAGCUACGAAAAAGCCGUGACAAGCCGGUUAUAUGGAAAUGCAGAGUCAAGAA
((((...(((((((.......)[[[..{{{..)).]]]..........))))..}}}.))))
[ "URS0000D67F58_12908/1-62", "URS0000D6757B_411470/18-67", "URS0000D6846C_12908/1-54", "URS0000D65719_12908/1-51", "URS0000D6A1C0_12908/1-53", "URS0000D67254_12908/1-53", "URS0000D6B7D3_12908/24-75", "URS0000D665ED_12908/30-81", "URS0000D6ACA0_12908/24-77", "URS0000D6777F_12908/25-79" ]
[ "UUCUUAAUGCAGCUACGAAAAAGCCGUGACAAGCCGGUUAUAUGGAAAUGCAGAGUCAAGAA-", "ACUGUAAUGCAGCCGA----AGCCGGUUCCGAGCCCGG-------AAAUGCAGAGGACAGA--", "UGUUUAAUGCAGCGCGA-AUACACAGUGACAAGCCUGUUG------AAUGCAGAGUCAACA--", "UCCUCAAUGCAGCCAUA----GCCAGUGACAAGCCUGGGU------AAUGCAGAGUCAAGG--", "UCCUCAAUGCAGCCAUA----GCCAGUGACAAGCCUGGG...
rfam_14_5_mafft
URS0000D67F64_12908_1-109
ACUGCCGCCGAACGGUGCGGGGCGUGAGGGUUGGGGAACCCCGCGACCGCUUCGGAUCGAGAUCGGUGCGGGUCUUAGGGAGCCCGUCCUGGUCGCUUCGGUGAAGGAG
.....(((((((((((.(((((((...(((((....)))))......))))))).)))).(((.((..(((((........))))).))..)))..)))))))......
[ "URS0000D67F64_12908/1-109", "URS0000D69D14_12908/1-109" ]
[ "ACUGCCGCCGAACGGUGCGGGGCGUGAGGGUUGGGGAACCCCGCGACCGCUUCGGAUCGAGAUCGGUGCGGGUCUUAGGGAGCCCGUCCUGGUCGCUUCGGUGAAGGAG", "ACUGCCGCCGGACGGAGCCGGCCGCGAGGGUUGGGGAACCCGACGACCGGCUGGUGUCCGAGACGGACCGGGUCUUAGGGAGCCCGGUUCGGUCGCUCCGGCGAAGGAG" ]
rfam_14_5_mafft
URS0000D67F66_953739_1-119
GCGAGACACCUGGUCCACAACACGACCACGACCGAUAGACUGUUCGUGGAACGUCGCGGGGCGCAGCCCCCUGCCGGUCCGCGUCACGAGUAGCCAGCAGCCGCUGCAACCCCAGGGAG
...............................................(((.((..(.((((.......)))).))).)))..............((((....)))).............
[ "URS0000D67F66_953739/1-119", "URS0000D670AB_12908/1-118" ]
[ "GCGAGACACCUGGUCCACAACACGACCACGACCGAUAGACUGUUCGUGGAACGUCGCGGGGCGCAGCCCCCUGCCGGUCCGCGUCACGAGUAGCCAGCAGCCGCUGCAACCCCAGGGAG", "GCGAGACGUCUGGUCUUGUGGCCGAGACCGCCCGAUAAACUGUUCCCGGAACGACGCGGGGCGCAGCCCCCUGCCGGUCCAC-CAACGAUCAGCCAGCAGCCGCUGCAAACCCAGGGAG" ]
rfam_14_5_mafft
URS0000D67F76_12908_1-84
GUAGCUUGAGGAUAGGGAGUUGGUGACGCUAUCACACCCUUUGGGUCAAAAGAGAUGCUGGGUCAGUCACACCAGCCAAGUUAC
((((((((..(((((.......[[[[[.))))).(((((...)))).....)....(((((....]]]]].)))))))))))))
[ "URS0000D67F76_12908/1-84", "URS0000D6CE65_12908/1-84" ]
[ "GUAGCUUGAGGAUAGGGAGUUGGUGACGCUAUCACACCCUUUGGGUCAAAAGAGAUGCUGGGUCAGUCACACCAGCCAAGUUAC", "GUAACUUGAGGAUAGGGAGUUGGUGACGCUAUCACACCCUUUGGGUCAAAAGAGAUGCUGGGUCAGUCACACCAGCCAAGUUAC" ]
rfam_14_5_mafft
URS0000D67F7A_12908_1-120
GACCUAAACCUCCGAGAUUUCUCUGGGGCAUGGCUAAAAAUCGCGACGAGCAUAAAGAACCCAUCAUCAGGUUCGCUCGUCGCGUCAUACGGGGAAACUCGUAUGUGAGUCGCAAGGCUC
(.((....((((.(((....))).))))...)).)......((((((((((.....(((((........))))))))))))))).((((((((....)))))))).(((((....)))))
[ "URS0000D67F7A_12908/1-120", "URS0000D6856A_12908/1-117", "URS0000D65A4F_12908/1-115", "URS0000D68D7E_12908/1-119" ]
[ "GACCUAAACCUCC--GAGAUUUCUCUGGGGCAUGGCUAAAAAUCGCGACGAGCAUAAAGAACCCAUCAUCAGGUUCGCUCGUCGCGUCAUACGGGGAAACUCGUAUGUGAGUCGCAAGGCUC", "AGCCUAAACUCAU---AGAUUUACUAUGGGCAUGGCAAAAAAACGCAC-GAAGAUAAAGACCCCAUCAUCAGG-UCGCUUCGUGCGUUAUGCAGGGAAACCUGCAUAUGAACCGCAAGGCUC", "GACCUAAACUGCAAAGGAA----UUUGUGGCAUGGUC-AAAAACGCAG-GACGAUAAAG...
rfam_14_5_mafft
URS0000D67F7F_12908_1-87
AUGAGGAGGAACCGAUAUGAACGAAGUUCAUAUUUAGGAUGCGCCCGACAAUCUGCCGCCGAGCAAAGCGAGGGGGCAAUACCCGCA
.......((...(..(((((((...)))))))........)...)).......((((.((..((...))..)).)))).........
[ "URS0000D67F7F_12908/1-87", "URS0000D66D68_12908/1-86", "URS0000D68F6C_12908/1-86", "URS0000D698B2_12908/1-86", "URS0000D6B6F4_12908/1-86", "URS0000D657F9_12908/1-86", "URS0000D6A64A_12908/1-86", "URS0000D664A5_12908/1-86", "URS0000D68F66_12908/1-86" ]
[ "AUGAGGAGGAACCGAUAUGAACGAAGUUCAUAUUUAGGAUGCGCCCGACAAUCUGCCGCCGAGCAAA-GCGAGGGGGCAAUACCCGCA", "-GAGCGGAGGGCGCAUAUGAACGGAGUUCAUAUUUAGGAUGCGCCCGACAAUCUGCCGCUGAGCAAC-GCGAGGGGGCAAUACCAAUC", "-GAGCGGAGGGCGCAUAUGAACAGCGUUCAUAUUUAGGAUGCGCCCGACAACAUGCCGACGAGCGAA-GCGAGGGGGCAAUACCCGUG", "-GAGCGGAGGGCACUUAUGAACGAAGUUCAUAA...
rfam_14_5_mafft
URS0000D67F93_12908_1-86
GCAUCGGCGGGAGGCAUCGACGCACGGUCGCCCAACCUGGUCGUCUGGACCGUGUCGAGCCAAUGACGAGACCGACUCGCCGUCGC
((..(((((((.(((......((((((((.........[[[[[[[..))))))))...)))...]]]]]..]]..)))))))..))
[ "URS0000D67F93_12908/1-86", "URS0000D675F5_12908/1-86" ]
[ "GCAUCGGCGGGAGGCAUCGACGCACGGUCGCCCAACCUGGUCGUCUGGACCGUGUCGAGCCAAUGACGAGACCGACUCGCCGUCGC", "AAGAACGCGGGAGGCGUCGACGCACGGUCCCCCAACCUCGUCGUCACGAUCGUGCCGAGCCAUUGACGAGACCGACCCGCGGUCAC" ]
rfam_14_5_mafft
URS0000D67F97_12908_1-246
AUCUUAUAUAGAUGUAUAAAUGCAAGACAAUUUAGCAUCUCCCUUUAAGGUAAUUUAUUUUAGAAGCUCAAGCAACAAACUUUAUUGUUUUGAUUAAAAAAAUCAAUGAAUUGGAAUUAUUUUUUUUCAGUUGAAAUGAGGUGAGCGAGAGUGAAAUGGGUUAACCGUGAGACCUUGAGUUGAAAAACUCUAAAAUUGAUCUAAAAAUGGAAUUUUUUUAUUUUCUUGUUUUUUAGUUACGGUUUG
((((((...((((((.(((((........))))))))))).....)))))).................(...(......(.((.(....................................................).))...).)...)......(((((.[[[[[[.))))).(((((....)))))..........(((((((.(((............)))...))))))).]]]]]]...
[ "URS0000D67F97_12908/1-246", "URS0000D671BB_12908/1-242", "URS0000D698BF_12908/1-242", "URS0000D6B948_12908/1-242", "URS0000D6B9C0_12908/1-243" ]
[ "AUCUUAUAUAGAUGUAUAAAUGCAAGACAAUUUAGCAUCUCCCUUUAAGGUAAUUUAUUUUAGAAGCUCAAGCAACAAACUUUAUUGUUUUGAUUAAAAAAAUCAAUGAAUUGGAAUUAUUUUUUUUCAGUUGAAAUGAGGUGAGCGAGAGUGAAAUGGGUUAACCGUGAGACCUUGAGUUGAAAAACUCUAAAAUUGAUCUAAAAAUGGAAUUUUUUUAUUUUCUUGUUUUUUAGUUACGGUUUG", "AUCUUAUAAAGAUGUAUAAAUGCAAGACAAUUUAGCAUCUCCCUUUAAGGUAAUUUAUUUCAG...
rfam_14_5_mafft
URS0000D67F98_12908_1-107
AGACUGUCAAGGUCAAGGUAGGCUUGGAAACUUGCCGCCAACCAAGACAGGGCUAUCCACAGGAAAUGUAUGAUGAUUAUUGUCAUAUUGUUAUCCUUGAUAGUUAU
...(((((..(((...(((.(((..(....)..)))))).)))..)))))(((((((...((((...((((((((.....)))))))).....)))).)))))))..
[ "URS0000D67F98_12908/1-107", "URS0000D69BFF_546264/1-107", "URS0000D69BFF_546263/1-107", "URS0000D68440_12908/1-107" ]
[ "AGACUGUCAAGGUCAAGGUAGGCUUGGAAACUUGCCGCCAACCAAGACAGGGCUAUCCACAGGAAAUGUAUGAUGAUUAUUGUCAUAUUGUUAUCCUUGAUAGUUAU", "AGACUGUCAAGGUCAAGGUAGGCUUGGAAACUUGCCGCCAACCAAGACAGGGCUAUCCACAGGAAAUGUAUGAUGAUUAUUGUCAUAUUUUCAUCCUUGAUAGUUAU", "AGACUGUCAAGGUCAAGGUAGGCUUGGAAACUUGCCGCCAACCAAGACAGGGCUAUCCACAGGAAAUGUAUGAUGAUUAUUGUCAUAUU...
rfam_14_5_mafft
URS0000D67FA7_12908_1-61
GGCCCGAAGCCAAACUGUCGCCGAUGGGCGGCUUGCCGCGAGGCUAGGCUUCGGGUCGCUC
(((((((((((.......((((....))))....(((....)))..)))))))))))....
[ "URS0000D67FA7_12908/1-61", "URS0000D68521_12908/1-61" ]
[ "GGCCCGAAGCCAAACUGUCGCCGAUGGGCGGCUUGCCGCGAGGCUAGGCUUCGGGUCGCUC", "GGCCUGAAACUGAACUGUCGCCAAUGGGCGGCUUGCCGUGAGGCUAGGUUUCGGGCCGCUC" ]
rfam_14_5_mafft
URS0000D67FB4_1345695_1-63
ACUAUGGAGUGUUAUAUAAAGCUGUAGUAGCUAUAGGCAAGACAGAACACGUUGAAAUAGUAA
(((((...(((((........(((.....(((...)))....))))))))......)))))..
[ "URS0000D67FB4_1345695/1-63", "URS0000D67B56_1123288/1-61", "URS0000D6A92D_12908/1-61" ]
[ "ACUAUGGAGUGUUAUAUAAAGCUGUAGUAGCUAUAGGCAAGACAGAACACGUUGAAAUAGUAA", "GCUGCGGAGUGUUAUAUAAA-CGGUGGUAGCU-UUGGCAAAACCGGACACGAUGAAACAGUAA", "GCUAUGGAGUGUCAUAUAAA-CUGUAGUAGCU-UAGGCAAGGCAGGACACUGCGAAGUAGUGA" ]
rfam_14_5_mafft
URS0000D67FC0_12908_1-63
GGUGUAACACGGCUACGGUUUAACCGUAAAGGUUCAAAGUCCUUGUAAACUGUGGAUGACACC
((((...(((((((((((.....)))))[[[..{{{..)).]]]......))))..}}}))))
[ "URS0000D67FC0_12908/1-63", "URS0000D6AA51_12908/1-63" ]
[ "GGUGUAACACGGCUACGGUUUAACCGUAAAGGUUCAAAGUCCUUGUAAACUGUGGAUGACACC", "GGUGUAACACGGCUACGGUUUAACCGUAAAGGUUCAAAGCCCUUGGAAACUGUGGAUGACACC" ]
rfam_14_5_mafft
URS0000D67FC2_12908_1-68
CCUUUGGAGAACUAUAUAAACAAGAGCAGUAAUUAUAAAUUAUGAAAUUGGGUUUGUUGAAUAAGGAA
((((....(((((.......(((.....(((..(....).)))....)))))))).......))))..
[ "URS0000D67FC2_12908/1-68", "URS0000D6893E_12908/1-68", "URS0000D678EA_12908/1-68", "URS0000D6A351_12908/1-68", "URS0000D66583_12908/1-68", "URS0000D6CE5D_12908/1-68", "URS0000D6632D_12908/1-68", "URS0000D6D014_12908/1-68", "URS0000D6D3A2_12908/1-68" ]
[ "CCUUUGGAGAACUAUAUAAACAAGAGCAGUAAUUAUAAAUUAUGAAAUUGGGUUUGUUGAAUAAGGAA", "CCUUUGGAGAACUAUACAAACAAGAGUAGUAAUUAUAUAUUAUGAAAUUGGGUUCGUUGAAUAAGGAA", "CCUUUGGAGAAUUAUACAAACAAAAGUAGUAAUUAUAUAUUAUGAAAUUGGGUUCGUUGAAUAAGGAA", "CCUUUGGAGAACUACAUAAACAAAAGUAAUAAUUAUAUAUUAUGAAAUUGGGUUCAUUGAAUAAGGAA", "CCUUUGGAGAACUAUCUAA...
rfam_14_5_mafft
URS0000D67FC3_12908_1-182
UUGACUGCACGCCCAGCUCUCCAUAUUUCUUAGCUGUGCGUAGCUUUAACAAGGAGGAAAUGUGAAUCCCCAGGCUCGGGGUGCGGCAGUGUGGAGACCUGUCGUAACGCGGCGCGCUCCCCCGCGGGCGGCCGUGAGGACAAACGGGCGGAGGCCCCUUGUCCGGAGCCGGCAGUAUGGCA
........((((.(((((.............))))).))))..........................((((.[[[[[))))((((((((.((....))))))))))..(((((.(((..........))))))))..((((((...(((....)))..)))))).]]]]]............
[ "URS0000D67FC3_12908/1-182", "URS0000D6D2DC_12908/1-178" ]
[ "UUGACUGCACGCCCAGCUCUCCAUAUUUCUUAGCUGUGCGUAGCUUUAACAAGGAGGAAAUGUGAAUCCCCAGGCUCGGGGUGCGGCAGUGUGGAGACCUGUCGU-AACGCGGCGCGCUCCCCCGCGGGCGGCCGUGAGGACAAACGGGCGGAGGCCCCUUGUCCGGAGCCGGCAGUAUGGCA", "UUGAUUGCGCGUACAGCUCUCC--AUUUCUAAGCUGUGCGCAGCAUUAACAAGGAGGAAAUGUGUAUCCCCAGGCUCGGGGUGCGGCAGUGUGGAGACCUGUCGUAAAAGCGGCGCGGCGUCAUGC...
rfam_14_5_mafft
URS0000D67FF0_289380_1-76
CCCUCUGAGAGUUAUAAGAAAUGAAAGUAGAUUACACUCUGUAUAGUUUUCAAAAUCUGACUCGUAGAACAGGGAA
((((....(((((.........((.....((....(..........)..))....)).))))).......))))..
[ "URS0000D67FF0_289380/1-76", "URS0000D669EF_445334/1-74", "URS0000D669EF_195102/1-74", "URS0000D66B0F_445334/1-74", "URS0000D67C61_742739/1-74", "URS0000D66044_195102/1-74", "URS0000D661A1_451755/1-74", "URS0000D6CCAC_12908/1-75", "URS0000D657F0_289380/1-74", "URS0000D6C075_445334/1-74" ]
[ "-CCCUCUGAGAGUUAUAAGAAAUGAAAGUAGAUUACACUCUGUAUAGUUUUCAAAAUCUGACUCGUAGAACAGGGAA", "-CCCUUGGAGAGUUGUAAGAAAUGAAAGUAGAUU--ACUCGGUAUAGUUUUCAAAAUCUGACUCGUAGAACAGGGAA", "-CCCUUGGAGAGUUGUAAGAAAUGAAAGUAGAUU--ACUCGGUAUAGUUUUCAAAAUCUGACUCGUAGAACAGGGAA", "-CCCUCGGAGAGUUAUACCAAAGGAAAGUAGAUU--ACUAUUUAUAGUCUUCAAAAUCUGACUCGU...
rfam_14_5_mafft
URS0000D67FF7_12908_1-126
CACCUUGCUGGUCGGGGCCAUGGUUUAACGACGGCGGCAAGGGAAGAGGCUCCUACCGUGGGAUAGACCUGAAACAGGAGCGUGGGUGGCGAGGCUUAGAACCCAAGGUCGGAAAGUCUGGCGAGU
..((((((((....................[[[[))))))))......((((((.]]]]......[[[[......)))))).(((((......{{.{{{{))))).]]]]......}}}}}}....
[ "URS0000D67FF7_12908/1-126", "URS0000D660A9_12908/1-125" ]
[ "CACCUUGCUGGUCGGGGCCAUGGUUUAACGACGGCGGCAAGGGAAGAGGCUCCUACCGUGGGAUAGACCUGAAACAGGAGCGUGGGUGGCGAGGCUUAGAACCCAAGGUCGGAAAGUCUGGCGAGU", "CACCUUGCUGGUC-GGGCCAUGGUUUAACGACAGCGGCAAGGGAAGAGGCUCCUACUGUGGGAUAGGUCUGAGACAGGAGCAAGGGCGGCGAAGUUAGCACCCCGUGACCGAAAAGGCUGACGAGU" ]
rfam_14_5_mafft
URS0000D67FFE_12908_1-121
GAUAAGGGAACGCACCCAGGCUCUCGAUUCUUCGGAAGAGCUCCCGGAGGCAGACGCAGCCAAGUGGGCUGCGGAAUCGUUACGGAAACGCGCAUUGAGCGGGACCACAAUGGUGCGGCCC
......((..((((((........(((((((((((........)))))))....(((((((.....)))))))..))))....((...(((.......)))...)).....))))))..))
[ "URS0000D67FFE_12908/1-121", "URS0000D6B2F0_12908/1-120" ]
[ "GAUAAGGGAACGCACCCAGGCUCUCGAUUCUUCGGAAGAGCUCCCGGAGGCAGACGCAGCCAAGUGGGCUGCGGAAUCGUUACGGA-AACGCGCAUUGAGCGGGACCACAAUGGUGCGGCCC", "GGAAAGGGAACGCACCCAGGCUUUCGAUCCUUCGGAAGAGCUCCCGGAGGCAGACGCAUCCACGCGGGAUGCGGAAUCGUUACGGGCCUUGCGCAUUGAGCUGGUCCACAAUGGUGCUCC--" ]
rfam_14_5_mafft
URS0000D68018_12908_1-295
AGAGUAGCUCUCUAUUUCUUAGUGAAGGCAAACUAAGGGUGCAUUAUAAAAUGUAUGGUAUUCCGCAUAUUGGCUUUGCGAAGUCGAUAUGGACAGGACAUAGUUAAAUUGCAAAUAACUAUGCAAGUAUUACUAUUUCCCAGAACGUUAUGUAACGUACGGAAGAUAGAUAAUCAGAUUCAAAACAGUUCCACGUAAAUUGUUUGAACUCCUAUAUUAUUAUAUCAGUCGUGGCUGACAAGGAUAGAGUCGCAAAUCUAUUCUUAUUUAUUAUGGGUUGAAAUUCCCUGGGGAA
((((.....))))...(((((((........)))))))(((((((....)))))))..........((((((((((....))))))))))....((((((((((((.........)))))))).....((((...(((((....((..........))..))))).....))))....(((((.(((.............)))))))).))))..............(((......)))..(((((((........)))))))...........(((........))).......
[ "URS0000D68018_12908/1-295", "URS0000D658A7_12908/1-295", "URS0000D65CDC_12908/1-295", "URS0000D67BD7_12908/1-295" ]
[ "AGAGUAGCUCUCUAUUUCUUAGUGAAGGCAAACUAAGGGUGCAUUAUAAAAUGUAUGGUAUUCCGCAUAUUGGCUUUGCGAAGUCGAUAUGGACAGGACAUAGUUAAAUUGCAAAUAACUAUGCAAGUAUUACUAUUUCCCAGAACGUUAUGUAACGUACGGAAGAUAGAUAAUCAGAUUCAAAACAGUUCCACGUAAAUUGUUUGAACUCCUAUAUUAUUAUAUCAGUCGUGGCUGACAAGGAUAGAGUCGCAAAUCUAUUCUUAUUUAUUAUGGGUUGAAAUUCCCUGGGGAA", "AGAGUAGCUCUCUA...
rfam_14_5_mafft
URS0000D6801E_1311804_1-168
CCUACUGGAGUGCUGACCAGCGGAACAUGCCUUCGAGUAAACUUCCUUCGGGAAUCUAGACUAGGGAGUAGCGUCCCGACCUAAAGAGGAUUGAAAGCAAGUAAAGCAGACCGUGCAUGUUAGGUGUGUGUGAUUGUGAGUAGCGGUAGAUCGGUUGCCGAGCCGAUU
.((.((((........)))).))(((((((..................................................................[[[[.[.[.[[[.[[[..))))))).]]].]]].]].]]]]...........(((((((......)))))))
[ "URS0000D6801E_1311804/1-168", "URS0000D6B8AC_280145/1-157", "URS0000D6B8AC_1217658/1-157", "URS0000D6AFBF_1217710/1-168", "URS0000D67783_1217663/1-168", "URS0000D6BBC6_1221296/1-168", "URS0000D6A3D8_1311804/1-168", "URS0000D69C77_1144673/1-168", "URS0000D68C8B_1311804/1-168", "URS0000D65C61_11446...
[ "CCUACUGGAGUGCUGACCAGCGGAACAUGCCUUCGAGUAAACUUCCUUCGGGAAUCUAGACUAGGGAGUAGCGUCCCGACCUAAAGAGGAUUGAAAGCAAGUAAAGCAGACCGUGCAUGUUAGGUGUGUGUGAUUGUGAGUAGCGGUAGAUCGGUUGCCGAGCCGAUU", "CCUACUGGAGUGCCGACCAGUAGAGCAUGCCUUCGAGUAAAACCAC-----------AAAGCAGGGUUUGGCAACCCGACUAAAAGAGGAUUGAAAGCAAGUGAAGCAGACCGCGCAUGUUAGGUUUGUGUGAUUGUGAGU...
rfam_14_5_mafft
URS0000D6803A_1234777_1-70
AGCUUGAGUAGAAGCGGCUAGCAGUCGGUAACACUUCACACUUACCGUCUUGCGGGGCAUUGCUCGUGAC
....((((((..........((((.((((..............)))).).))).......))))))....
[ "URS0000D6803A_1234777/1-70", "URS0000D66BDD_864073/1-69", "URS0000D68E1B_1161913/1-64", "URS0000D6CFF9_1144319/1-64", "URS0000D6AB9A_757424/1-69", "URS0000D6644E_1175306/1-69", "URS0000D685EC_12908/1-69", "URS0000D67767_12908/1-69" ]
[ "AGCUUGAGUAGAAGCGGCUAGCAGUCGGUAACACUUCACACUUACCGUC--UUGCGGGGCAUUGCUCGUGAC", "GGAUUGAGUAGAAGCGGCUAGCGGUCGGUAGAACGG-ACACUUACCUUC--CUGCGGGGCAUUGCUCGUGAU", "AGAUUGAGUAGAAGCGGCUAGCCGUCGAU--------CCAAAUACCAUCGACUGUGGGGCAUUGCUCGUGAC", "AAGCUGAGUAGAAGCGGCUAGCCGUCGAU--------CCAAAUACCAUCGACUGUGGGGCAUUGCUCGUGAC", "CCA...
rfam_14_5_mafft
URS0000D6803B_1261068_1-122
UUUUUACACAGGCAUUUAUUGCGCUGUAUACGUGGGUAGCUGAAUUAACGUUUAAGCGGCGUAUUUCCGUCGCCAGCCCCACGGUUAGGAAGGCCGCGUUUAGCGGCUUUUCCUAUAGUUAG
.......(((((((.....))).))))...((((((...((((((....)))....(((((......))))).))).))))))....(((((((((.......)))))))))..........
[ "URS0000D6803B_1261068/1-122", "URS0000D67FFD_698960/1-121", "URS0000D69CD6_904144/1-121" ]
[ "UUUUUACACAGGCAUUUAUUGCGCUGUAUACGUGGGUAGCUGAAUUAACGUUUAAGCGGCGUAUUUCCGUCGCCAGCCCCACGGUUAGGAAGGCCGCGUUUAGCGGCUUUUCCUAUAGUUAG", "UUUUUACACAGGCAUUUAUUGCGCUGUAUACGUGGGUAGCUGAAUUAACGUUUAAGCGGCGUA-UUCCGUCGCCAGCCCCACGGUUAGGAAGGCCGCGUUUAGCGGCUUUUCCUAUAGUUAG", "UUUUUACACAGGCAUUUAUUGCGCUGUAUACGUGGGUAGCUGAAUUAACGUUUAAGCGG...
rfam_14_5_mafft
URS0000D68052_12908_1-109
AGGCGCAAAAGCGGUUUUAUUGUGUUCAGAAGCAGUAUGCUGCCAGCCUCUGAAGGGUUUUCCGUAGACCUCAUCUGAACUAGGCGAAAGCCGAAAGAAAACGGAGAAA
((((......(((((..((((((..[[[[..)))))).)))))..))))............(((..........]]]]....(((....))).........))).....
[ "URS0000D68052_12908/1-109", "URS0000D68101_907348/1-106", "URS0000D67B45_12908/1-109" ]
[ "AGGCGCAAAAGCGGUUUUAUUGUGUUCAGAAGCAGUAUGCUGCCAGCCUCUGAAGGGUUUUCCGUAGACCUCAUCUGAACUAGGCGAA-AGCCGAAAGAAAACGGAGAAA", "--AGGCGAAAGCAG-CGUAUUGUGUUCAGAAGCAGUAUUCUGCCAGCCUCUGAAGGGUUUUCCGUAGACCUCAUCUGAACUAGGCGAA-AGCCGAACGAAAACGGAACAA", "AGGCAUUAACGUAU-UUUAUUGUGUUCAGAAACAGUGAAAUACCAGCCUCUGAAGGGUUUUCCGGAGACCUCAUCUGAACUAG...
rfam_14_5_mafft
URS0000D6805A_12908_1-190
ACCAGAGUCCCGCGAGGUCAAGGCCUCGGAGAGCGUGUCUUGUAAAUUCAGUAACCCACUGGCGGUGUAAAAACGGUCGUGGCCGGUAUCCGAAUUCCGGGCCGCGUUGCUGUCAGUAAUGAAAAACCAAUUUGUGGCAGGGUUGCCUCCAAGGCUCCCCUUUCACAUUUAGCAAGUGGUUACUUCUUAU
((.....(((((.(.((......)))))).))....))...........(((((((.((((((((............(((((((((..........)).)))))))...))))))))...............(((((.((((...(((...)))...)))).)))))..........)))))))......
[ "URS0000D6805A_12908/1-190", "URS0000D69FF4_12908/1-190" ]
[ "ACCAGAGUCCCGCGAGGUCAAGGCCUCGGAGAGCGUGUCUUGUAAAUUCAGUAACCCACUGGCGGUGUAAAAACGGUCGUGGCCGGUAUCCGAAUUCCGGGCCGCGUUGCUGUCAGUAAUGAAAAACCAAUUUGUGGCAGGGUUGCCUCCAAGGCUCCCCUUUCACAUUUAGCAAGUGGUUACUUCUUAU", "GCCAGAGUCCCGCGAAGUCAAGGCUUCGGGGAGCGUGUCUUGUAAAUUCAGUAACCCACUGGCGGUGUAAAAACGGUCGUGGCCGGUAUCCGAAUUCCGGGCCGCGUUGCUGUCAGUAA...
rfam_14_5_mafft
URS0000D6805C_12908_1-125
UUGUAUUACCGGAGAGAAAUCUCGUCAGGUCGAUAGUUAGGUCGCGAAUAUUUAUAUUUAAGCGUAAUUCUAAGUACGCCGCCCUAAUUGGGAAAAAGCCAGUAAUGGCUUUUUUUCUUUUAUGG
.......(((((((......))).)..)))...((((((....((((((......)))....((((........)))).)))..)))))).(((((((((......)))))))))..........
[ "URS0000D6805C_12908/1-125", "URS0000D6A3F5_12908/1-122", "URS0000D66175_1262829/1-121", "URS0000D67FC4_12908/1-123" ]
[ "UUGUAUUACCGGAGAGAAAUCUCGUCAGGUCGAUAGUUAGGUCGCGAAUAUUUAUAUUUAAGCGUAAUUCUAAGUACGCCGCCCUAAUUGGGAAAAAGCCAGUAAUGGCUUUUUUUCUUUUAUGG", "UUAAUUUACCGGAGA-ACAUCUCGUCAGGUCGAUAGUUAGGUAGUGAAUAGUUUUAUUUAAGCGU-AUCUUAAAUACGCCACCCUAACUGGG-AAAAGCCCUUGCGGGGCUUUUUUCUUUUUUAA", "UUAUAUUACCGGAGA-AAAUCUCGUCAGGUCGAUAGUUAGGUAGUGAAUAGUU...
rfam_14_5_mafft
URS0000D6805D_1121865_1-86
AGGAAUAGAAGUAGAAAAAUAUCGGUCGCACACGCACCAAUUCGUUGGUAUCUGAGAGGUGGGGAAGGGCCGUCCCACCUAUUCCU
((((((((..((..........[[[[[....)).((((((....)))))....)....(((((....]]]]].)))))))))))))
[ "URS0000D6805D_1121865/1-86", "URS0000D6B097_12908/1-82", "URS0000D6C069_12908/1-84", "URS0000D6885F_12908/1-84", "URS0000D6B8DC_1302863/1-84", "URS0000D6B8DC_12908/1-84", "URS0000D6A531_12908/1-84", "URS0000D67D47_12908/1-84", "URS0000D69F23_12908/1-84", "URS0000D65F3E_12908/1-84" ]
[ "AGGAAUAGAAGUAGAAAAAUAUCGGUCGCACACGCACCAAUUCGUUGGUAUCUGAGAGGUGGGGAAGGGCCGUCCCACCUAUUCCU", "AAGAAUAGAAGUAGAAAAACAUCGGGAAC-UACGCACCCUUUG---GGUAUCUGAAAAGCGGGGAAUUCCCGUCCCGCCUAUUCCA", "AGGAAAUGAAGUAGAAAAAUAUCGGACGCACACGCACCCAAAAG--GGUAUCUGAGGGGCGGGGAAUGUCCGUCCCGCCAUUUCCU", "AGGAAAUGAAGUAGAAAAAUAUCGGACGCACACGCACCC...
rfam_14_5_mafft
URS0000D6805E_12908_1-214
ACAACUCAGGUCUGUGGUUGCAAGUCGAUGCCAGUUGCAGGCGAAACGAUCCACGUAAGCAGCAAAAUUUUGCUGUGAGCACGGUGCAGCUUAGAAGUAAGUCCUGCCGCAAAAAAAAUUAUGGGCGAGAGAGGUAGUAGUGGGGAGCGGAAUGCUUAGGAGCGAACCUUCCAGCAGGCGAGUGUGGGGGCGAAAACCAGGUCAGCUGAGUUGU
(((((((((..((((((((.....(((.((((.[[[[[[))))...)))((((((...(..(........)..)..........]]]]]].............(((((((..............)))...((((.....((....(((.....))).....))....))))..)))).....))))))......)))))...))))))))))))
[ "URS0000D6805E_12908/1-214", "URS0000D6CF25_12908/1-206", "URS0000D6A466_12908/1-204", "URS0000D66EE8_471871/1-210", "URS0000D65912_441770/1-210", "URS0000D65912_441772/1-210", "URS0000D65912_536232/1-210", "URS0000D67562_12908/1-202", "URS0000D6C13E_12908/1-203", "URS0000D679F6_12908/1-205" ]
[ "ACAACUCAGGUCUGUGGUUGCAAGUCGAUGCCAGUUGCAGGCGAAACGAUCCACGUAAGCAGCAAAAUUUUG--CUGUGAGCACGGUGCAGCUUAGAAGUAAGUCCUGCCGCAAAAAAAAUUAUGGGCGAGAGAGGUAGUAGUGGGGAGC---GGAAUGCUUAGGAGCGAACCUUCCAGCAGGCGAGUGUGGGGGCGAAAACCAGGUCAGCUGAGUUGU", "UGAUAUCAGGUCUGUGGUUGAAAGUCGAUGCUAGUCGCAGGCGAAACGAUCCUCGUAAGCAGGGACAGGUCU--CUGUGAGCAUGGUGCG...
rfam_14_5_mafft
URS0000D68064_12908_1-99
GUCAGUCCCGUUCGUGCCGUGGUCAUCCACAGGUAAGAGGCACCAUAGGUGCCCGCCACGGCCGUUCUCCCAAGAGGGAGAACAAGCGGGACAGGAGGA
....((((((((...((((((((.............(.(((((.....))))))))))))))..(.((((......)))).)..)))))))).......
[ "URS0000D68064_12908/1-99", "URS0000D666F8_12908/1-99", "URS0000D65D7E_12908/1-98", "URS0000D66AAD_12908/1-99" ]
[ "GUCAGUCCCG-UUCGUGCCGUGGUCAUCCACAGGUAAGAGGCACCAUAGGUGCCCGCCACGGCCGUUCUCCCAAGAGGGAGAACAAGCGGGACAGGAGGA", "GUCAGUCCCGUUUUGUGCCGUGGUCAUCCAC-GGUAAGUGGUGCCAUAGGCACCCGCCACGGCAGUUCUCCCGAGAGGGAGAACAAGCGGGACAGGAGGA", "GUCAGUCCCG-UUCGUGCCGUGGUCAUCCAC-GGUAAGUGGUGCCAUAGGCACCCGCCACGGCAGUUCUCCCGAGAGGGAGAACAAGCGGGACAGGAGGA", ...
rfam_14_5_mafft
URS0000D68071_12908_1-121
AGCCUAAACCAGCAAGUUGCUGGCAUGGCGAAAAGUAAAGUCCAAACAGGAUAAAAAACCCAUCACAUGGGGUGUCCUGUUUGGCCGUACUGGGAAACUGGUACGAGUGACUUCGGUCACU
.(((....((((((...))))))...)))............(((((((((((....(.((((.....)))).)))))))))))).((((((((....))))))))((((((....))))))
[ "URS0000D68071_12908/1-121", "URS0000D65D70_12908/1-117" ]
[ "AGCCUAAACCAGCAAG---UUGCUGGCAUGGCGAAAAGUAAAGUCCAAACAGG-AUAAAAAACCCAUCACAUGGGGUGUCCUGUUUGGCCGUACUGGGAAACUGGUACGAGUGACUUCGGUCACU", "AGCCUAAACUAGCAAGUAAUUGCUGGCAUGGUGA-----AAAGUCCAAUCAGACAUAAAAAACCCAU--CAUGGGGUUGUCUGAUUGGCCAUAUCGGGAAACCGGUAUGAAUGGCUUCGGCCAU-" ]
rfam_14_5_mafft
URS0000D68079_12908_1-83
AGAGUAACUCCGCCUGUGUUGUUUCAUGGUUUGUCAUUGCACAUCACAGCCGGUCCCAAGCCCGGACAAAGGAGGAGGGUGUG
.(.(...(((((((((((..........................)))))[[[..{{{..)).]]].....))))..}}}).).
[ "URS0000D68079_12908/1-83", "URS0000D677E6_3694/1-75", "URS0000D68423_6183/1-69", "URS0000D66C43_3988/1-74", "URS0000D6BAC7_12908/1-82", "URS0000D6D3AB_12908/1-72", "URS0000D68319_12908/1-72", "URS0000D6868D_3988/1-75", "URS0000D6A296_6183/1-70", "URS0000D6583A_6183/1-70" ]
[ "AGAGUAACUCCGCCUGUGUUGUUUCAUGGUUUGUCAUUGCACAUCACAGCCGGUCCCAAGCCCGGACAAAGGAGGAGGGUGUG---", "CAUGUAACUCCGCCUGUGCUGCAU-----------UUCAUAGCACACAGCCGGUCUCAAGCCCGGGUUAAGGAGGAGAGAUGCAUG", "AAUGUAACUCCGCCUGUAGCUGGU------------CCGGAGGCCACCGCCGGUCCCAAGCCCGGAUAAAGGAGGAGGGUU-----", "GAAGUAACUCCGCCUGUGCCA----GUGCCUUGUCAUUA...
rfam_14_5_mafft
URS0000D6807A_12908_1-91
CGAAGCCCUCAGGAACCUGCCGCGGAUCGCCCGCGGUGCUGCCACCGCUCUCCUUCAGUGGAUCGGCCCGCGGAGGUUCCUGAGGGUUUCG
((((((((((((((((((.((((((...(((.((((((....))))))..(((......)))..)))))))))))))))))))))))))))
[ "URS0000D6807A_12908/1-91", "URS0000D66BB0_675635/1-91" ]
[ "CGAAGCCCUCAGGAACCUGCCGCGGAUCGCCCGCGGUGCUGCCACCGCUCUCCUUCAGUGGAUCGGCCCGCGGAGGUUCCUGAGGGUUUCG", "CGGGGCCCUUAGGAGCCUGCCGGGGAUCGCCAGCGGUGCUGCCAUCGCUCUCCUUCAGUGGAUCGGCCCCCGGAGGCCCCUAAGGUCCUCG" ]
rfam_14_5_mafft
URS0000D6807E_12908_1-85
AAAGAUAGAAGUAGAAAACUCGGGCGCUACACACCUUUGCGCAAGGUUUCUGGAGAUGAGGGGAAUGCCCGUCCCUCCUAUCUUU
((((((((..((((......[[[[[.)))).((((((.....))))).....)....(((((....]]]]].)))))))))))))
[ "URS0000D6807E_12908/1-85", "URS0000D6AB4C_12908/1-85" ]
[ "AAAGAUAGAAGUAGAAAACUCGGGCGCUACACACCUUUGCGCAAGGUUUCUGGAGAUGAGGGGAAUGCCCGUCCCUCCUAUCUUU", "AAAGAUAGAAGUAGAAAACUCGGGCGCUACACACCUUUGUGCAAGGUUUCUGGAGAUGAGGGGAAUGCCCGUCCCUCCUAUCUUU" ]
rfam_14_5_mafft
URS0000D68083_12908_1-48
AGCCGCUAUACGCUUGGGUAUAGCGAAGGGCCACUUGGGGCCGACAGU
...((((((((......))))))))...((((......))))......
[ "URS0000D68083_12908/1-48", "URS0000D6D048_12908/1-48" ]
[ "AGCCGCUAUACGCUUGGGUAUAGCGAAGGGCCACUUGGGGCCGACAGU", "AACCGCUGUACGCUUGGGUACGGCGAAGGGCCGCUUGGGGCCGACGGG" ]
rfam_14_5_mafft
URS0000D68090_595536_1-216
GGGGCGCGGUUCGCGGGGACGGGAGGCGACCCUCUCUCGAAACCUCGCGACGUCACGUCGCCGGCGCUGGUCUUCCUUCGUGCGGAAGCCUCGCGAAAGCGAGGCGCGGACCGGGCCGAAUAUCCGAGGGUGGCGCGGGGAUAGACUACCCGAAAGGGGAAAACAACCCUGGCCCCGGAGGCGGCGAACAGGUGAAAAGGCAACCGUGGUCCGGAA
....((((((.(((((((........................)))))))............((((.((((((((((.......))))...((.(......).))....)))))))))).........((((........................................))))...........................))))))........
[ "URS0000D68090_595536/1-216", "URS0000D6579A_12908/1-211", "URS0000D6BF46_12908/1-211", "URS0000D66C6D_595536/1-213", "URS0000D6AA01_595536/1-213", "URS0000D6B854_595536/1-214", "URS0000D683AC_12908/1-214", "URS0000D6C16B_595536/1-213" ]
[ "GGGGCGCGGUUCGCGGGGACGGGAGGCGACCCUCUCUCGAAACCUCGCGACGUCACGUCGCCGGCGCUGGUCUUCCUUCGUGCGGAAGCCUCGCGAAAGCGAGGCGCGGACCGGGCCGAAUAUCCGAGGGUGGCGC-GGGGAUAGACUACCCGAAAGGGGAAAACAACCCUGGCCCCGGAGGCGGCGAACAGGUGAAAAGGCAACCGUGGUCCGGAA", "GGGGUGCGGUUCGCAAGGGUGGGGGCAGACCCUCUCUCG--CUCGAGCGACGCCACGCCGCCGGCACGGCUUCUCCUUCGUGCGGAGGCAUG...
rfam_14_5_mafft
URS0000D68099_12908_1-120
GGCAGGGGCUUUCGCCCCGGCUUUCGGGACAUCGGAGAGCUCCCGGGGUCAUACAUGCCGCACAGAGGCAUGGAACCCGUUACGGAUUAGCGCACAGAGCGAUCCACAAUGACGCAAGCC
......(((((.((.(........((((((.((((.......)))).))....((((((.......))))))...))))....(((.(.((.......)).)))).....).)).)))))
[ "URS0000D68099_12908/1-120", "URS0000D66AE4_12908/1-118", "URS0000D65701_12908/1-120", "URS0000D678D9_12908/1-120" ]
[ "GGCAGGGGCUUUCGCCCCGGCUUUCGGGACAUCGG-AGAGCUCCCGGGGUCAUACAUGCCGCACAGAGGCAUGGAACCCGUUACGGAUUAGCGCACAGAGCGA-UCCACAAUGACGCAAGCC", "GGCAGGGGCUUGCG--CAAGCUUUCGGUACUUCGGAAGAGCUCCCGGAGUCAGACGUAUUCCAAGGGGGAUACGGAACCGUUACGGAGUCGCGCACUGAGCGAUUCCACAAU--CGCAAGCC", "GGCAGGGGCUUGCGCCCAGGCUUUCGGUACAUCGG-AGAGCUCCCGGUGUCAUACAUGC...
rfam_14_5_mafft
URS0000D680A1_870967_1-109
UAUCACCAAGGAUUGUCUUUCUCGCAACAUUUUUCCUGUGAGAAGAAGAAGAAGGGAAUCAAACUUGAACAACCUCGUUCAGGUGCGAAUCAAAUUAUAAAAGGAAGUG
...................(((((((..........)))))))....................(((((((......)))))))..........................
[ "URS0000D680A1_870967/1-109", "URS0000D66C46_701176/1-106", "URS0000D66C46_870968/1-106" ]
[ "UAUCACCAAGGAUUGUCUUUCUCGCAACAUUUUUCCUGUGAGAAGAAGAAGAAGGGAAUCAAACUUGAACAACCUCGUUCAGGUGCGAAUCAAAUUAUAAAAGGAAGUG", "UAUCACCAAGGAUUGUCUUUCUCGCAACAUUUUUCCUGUG---AGAAGAAGAAGGGAAUCAAACUUGAACAACCUCGUUCAGGUGCGAAUCAAAUUAUAAAAGGAAGUG", "UAUCACCAAGGAUUGUCUUUCUCGCAACAUUUUUCCUGUG---AGAAGAAGAAGGGAAUCAAACUUGAACAACCUCGUUCAGGUG...
rfam_14_5_mafft
URS0000D680A2_12908_1-84
GGUCUGGGGGUUCUGCGAUCCCCCCACGAGGCGACAUGCCCAAGUAUCGCGUCCCGUUUCUUCUCACGAGGGCGCACUAUUAUG
....((((((..........))))))......................((((((...............)))))).........
[ "URS0000D680A2_12908/1-84", "URS0000D6B241_12908/1-80", "URS0000D6950D_12908/1-77", "URS0000D686ED_12908/1-77", "URS0000D6772A_114615/1-82", "URS0000D69BA4_12908/1-82", "URS0000D6CFB8_12908/1-82", "URS0000D67134_12908/1-77", "URS0000D69C06_12908/1-83", "URS0000D6AB8E_12908/1-82" ]
[ "GGUCUGGGGGUUCU-GCGAUCCCCCCACGAGGCGACAUGCCCAAGUAUCGCGUCCCGUUUCUUC-UCACGAGGGCGCACUAUUAUG", "GGCGUGGGGGGCGU-GCGAUCCCCCCGUGAGGCGACA-GCCCAAGCAUCGCGUCCCGUGGAUU--UUGCGAGGGCGCAGCCAUG--", "-CUGGUGGGGGUUU-GCGAUCCCCUCAUGAGGCGACAUGCCCAAGAAUCGCGCCCCGUUU-----UCACAAGGGCGCACGCAUG--", "CGCAUGGGGGCU---GCGAUCCCCUCACGAGGCGCCAUG...
rfam_14_5_mafft
URS0000D680A7_644076_1-44
UGGUCCGCAGUUCACCAAGGCUCCGCCACGCGCUAAACCUGCGU
((((.........))))...........................
[ "URS0000D680A7_644076/1-44", "URS0000D67861_292414/1-44" ]
[ "UGGUCCGCAGUUCACCAAGGCUCCGCCACGCGCUAAACCUGCGU", "UGGUCUGCAGUUCACCAAGGCUCCGCCACGCGCUAAACCUGCAU" ]
rfam_14_5_mafft
URS0000D680B0_12908_1-148
GCCUGCCAGAACGGUCGUACGGAUACAGUACAAAACUAAUCGUUUAUGAAAAUAUCACUAAUAUAUUAGGUCGACAACGUAUCCCGUUCUAUUGCGAGAAGAAAGACUCAUUAUGGUAGUAGCACUGGUGGUAACACCAAUGCAGGAG
..((((((....((((....((((((....................................................))))))..((((......))))....)))).....))))))..(((.(((((....))))).))).....
[ "URS0000D680B0_12908/1-148", "URS0000D6A666_12908/1-144", "URS0000D6A95D_12908/1-144", "URS0000D67414_12908/1-147", "URS0000D6AF8B_12908/1-146", "URS0000D6BBA3_12908/1-147", "URS0000D657C4_12908/1-148", "URS0000D65802_12908/1-147", "URS0000D689BE_12908/1-148", "URS0000D6B08D_12908/1-148" ]
[ "GCCUGCCAGAACGGUCGUACGGAUACAGUACAAAACUAAUCGUUUAUGAAAAUAUCACUAAUAUAUUAGGUCGACAACGUAUCCCGUUCUAUUGCGAGAAGAAAGACUCAUUAUGGUAGU-AGCACUGGUGGUAACACCAAUGCAGGAG", "GCCUACCAGAACGGUCGUACGGAUACGG---AAAACUAAUCGUUUAGC-AAUAUCAACUAAU-UAUUAGGUCGACAAUGUAUCCCGUUCUUAUGCGAGAAGAAAGACUUAUUAUGGUAGUUAGUGUUGAUGGAGACAUUAGCACGGGAG", "GCCUA...
rfam_14_5_mafft
URS0000D680B6_12908_1-87
GUCCGGCUGCGCGGUUUACGCAGGCCGGGCGAAUCUGUACGACGCCGCCCGGAACGACACGGGGCGGCACAGAUCCAUAAAGGAGGA
(((((((((((.......))).))))))))..((((((.....(((((((...........))))))))))))).............
[ "URS0000D680B6_12908/1-87", "URS0000D6C224_12908/1-87", "URS0000D69883_12908/1-87", "URS0000D695C7_12908/1-87", "URS0000D6A80D_12908/1-86", "URS0000D691DA_12908/1-87", "URS0000D67B59_12908/1-87", "URS0000D69016_12908/1-87", "URS0000D6B1DF_12908/1-87", "URS0000D6BE21_12908/1-87" ]
[ "GUCCGGCUGCGCGGUUUACGCAGGCCGGGCGAAUCUGUACGACGCCGCCCGGAACGACACGGGGCGGCACAGAUCCAUAAAGGAGGA", "GUCCGGCUGCGCGGUUUACGCAGGCUGAGCAAAUCUGUACGACGCCGCCCGGAACGACACGGGGCGGCACAGAUCCAUAAAGGAGGA", "GCCCGGCUGCGCGGUUUACGCAGGCUGGGCAAAUCUGUACGACGCCGCCCGGAACGACACGGGGCGGCACAGAUCCAUAAAGGAGGA", "GUCCGGCUGCGCGGUUUACGCAGGCUGGGCAAAUCU...
rfam_14_5_mafft
URS0000D680D6_12908_1-87
UUUAGGAGGAAACAAAAUGAACGAAGUUUAUUUUUAGAAUGUUUUCGAGGAAAUGCCUAUAAUCAAAGGAAAGGAACAAUACAUAUA
.......((((((..(((((((...)))))))........)))))).......((....(..((...))..)....)).........
[ "URS0000D680D6_12908/1-87", "URS0000D6B23E_12908/1-87" ]
[ "UUUAGGAGGAAACAAAAUGAACGAAGUUUAUUUUUAGAAUGUUUUCGAGGAAAUGCCUAUAAUCAAAGGAAAGGAACAAUACAUAUA", "UUUAGGAGAAAACAAAAUGAACGAAGUUUAUUUUUAGAAUGUUUUCGACGAAAUGCCGAUAAUCAAAGGAAAGGAACAAUACAUAUA" ]
rfam_14_5_mafft
URS0000D680D9_12908_1-126
UCGUCCAGGUACUGAGGCGUUCAUCGUAAUCAGGUGAACGGGGAGCAUAACCACCGUCGCACAGAGUGCUUAACGGGCUCCUGCAAUAACUCAACUCAGCCUCGCCAUGCUACACAGUACCUGGCG
.((((.((((((((...(((((((.........)))))))((((.........((((.((((...))))...))))..))))................................))))))))))))
[ "URS0000D680D9_12908/1-126", "URS0000D6B8F6_1044999/1-125", "URS0000D65E26_104623/1-126" ]
[ "UCGUCCAGGUACUGAGGCGUUCAUCGUAAUCAGGUGAACGGGGAGCAUAACCACCGUCGCACAGAGUGCUUAACGGGCUCCUGCAAUAACUCAACUCAGCCUCGCCAUGCUACACAGUACCUGGCG", "UCGUCCAGGUACUGAGGCGUUCGUCUGAUUAAGACGAACGGGGAGCA-ACAAACCGUCGUACAGAGUGCUAAACGGGCUCCUGCAAUAACUCAACUCAGCCUCGCCAUGCUACACAGUACCUGACG", "UCGUCCAGGUACUGAGGCGUUCACCAAAACCGGGUGAACGGGGAGCAUAAA...
rfam_14_5_mafft
URS0000D680E6_12908_1-73
UUGCUCGCUAUGGUGCGUGUACCCAAAAGGGCGCAGCGUUGUUGACAACGCAGGACACCUAAGGCGGGCUUUU
..((((((...((((.(((..(((....)))))).((((........))))....))))....))))))....
[ "URS0000D680E6_12908/1-73", "URS0000D67F8F_12908/1-73" ]
[ "UUGCUCGCUAUGGUGCGUGUACCCAAAAGGGCGCAGCGUUGUUGACAACGCAGGACACCUAAGGCGGGCUUUU", "UGGCUCGCUAUGGUGGCGUACCCCGAAAGGGCGCGGCGUUGUUUGAAACGCAGGACACCUAAAGCGGGCUUUU" ]
rfam_14_5_mafft
URS0000D680E8_12908_1-116
GACCUAACCUCCGCCGACUGGCGGAGCAGGGUUAAAAAACUCAUGGACGAUACUGAACCCCGUGUUCAGCACUCGUCCAUGAGUCAUAGCUCGAAAGGGCUAUGGGCCGCAAGGCC
((((....(((((((....)))))))...))))......(((((((((((..((((((.....))))))...))))))))))).((((((((....))))))))((((....))))
[ "URS0000D680E8_12908/1-116", "URS0000D695EE_12908/1-113" ]
[ "GACCUAACCUCCGCCGACUGGCGGAGCAGGGUUAAAAAACUCAUGGACGAUACUGAACCCCGUGUUCAGCACUCGUCCAUGAGUCAUAGCUCGAAAGGGCUAUGGGCCGCAAGGCC", "AGCCUAAACCUCGCU-UCUUGCGCGGCACGGCUCCAAAACUCA-GGAAGAUACUGAACCCCGCGUUCAGCACUCUUCC-UGAGUCAUAGCUCGAAAGGGCUAUGGGCCGCAAGGCC" ]
rfam_14_5_mafft
URS0000D680ED_536233_1-73
CCUGUGAAGAAUCAUACCAAAUGAAAGUAGUAUGUGAUUUAUCACUACAAAAUCAGAUUCGUUGAAACAGGAA
(((((...(((((........(((.....(((.((........)))))....))))))))......)))))..
[ "URS0000D680ED_536233/1-73", "URS0000D681B8_929505/1-62", "URS0000D681B8_445337/1-62", "URS0000D66CD7_445337/1-62", "URS0000D66CD7_929506/1-62", "URS0000D69ADE_12908/1-62", "URS0000D691C5_1289590/1-73", "URS0000D6A6FF_12908/1-62" ]
[ "CCUGUGAAGAAUCAUACCAAAUGAAAGUAGUAUGUGAUUUAUCACUACAAAAUCAGAUUCGUUGAAACAGGAA", "CCUGUUAAGAGUCAUAUCAAAUGGUAGUAG-----------CUUCGGCAAACCCAGAUUCGUUGAAGCAGGAA", "CCUGUUAAGAGUCAUAUCAAAUGGUAGUAG-----------CUUCGGCAAACCCAGAUUCGUUGAAGCAGGAA", "CCUGUUAAGAGUCAUAUCAAAUGGUAGUAG-----------CUUUGGCAAACCCAGAUUCGUUGAAGCAGGAA", ...
rfam_14_5_mafft
URS0000D680F3_12908_1-85
AAAUAUUGAGGACGGAACAGGCAGCCGUCACGCCAUACUUAUUAUGGUCUUAAAGAGAUGUAGGAGUGUCAACCUACCAAUAUUU
((((((((..(((((....[[[[.))))).(((((((.....))))))......)....(((((..]]]]..)))))))))))))
[ "URS0000D680F3_12908/1-85", "URS0000D684B1_526987/1-82", "URS0000D6D2CF_12908/1-79", "URS0000D67CDA_12908/1-79", "URS0000D6BF5A_293826/1-84", "URS0000D6A8F4_12908/1-81", "URS0000D6A854_12908/1-79", "URS0000D68CC1_12908/1-80", "URS0000D692D9_12908/1-81", "URS0000D692D9_1262785/1-81" ]
[ "-AAAUAUUGAGGACGGAACAGGCAGCCGUCACGCCAUACUUAUUAUGGUCUUAAAGAGAUGUAGGAGUGUCAACCUACCAAUAUUU", "-AAUUGUUGAGGGCGGAACAGGCAGCCGCCACGCCUU-UUUAUAAGGUCUUAAAAGAGAUGCA-GAUUGCCACCUGCCAAUAAUU-", "-AAACAUUGAGGGCGGAACAGGCAGCCGCCACACC------CUUUGGGUCUGAAAGAGAUGUAAGAUUGUCACCUUACCUUUGUUU", "-AAAUAAUAAGGACGGAACAGGCAGCCGUCACGCC----...
rfam_14_5_mafft
URS0000D680F7_213810_1-85
CCGGGGUUGAUACGUCCCCCGGUGUCGCACAGGAUUGCAUGAUGCCAGUCACCUGAUUUCAACCUGGAAUCAGGAAUGGCGGAGC
((((((..........)))))).............................((((((((.......))))))))...........
[ "URS0000D680F7_213810/1-85", "URS0000D6D0BC_1262956/1-85", "URS0000D6C733_12908/1-85" ]
[ "CCGGGGUUGAUACGUCCCCCGGUGUCGCACAGGAUUGCAUGAUGCCAGUCACCUGAUUUCAACCUGGAAUCAGGAAUGGCGGAGC", "CCGGGGUUGAUACGUCCCCCGGUGUCGCGCAGGAUUGCAUGAUGCCAGCCACCUGAUUUCAACCCGAAAUCCGGAAUGGCGGAGC", "CCGGGGUUGAUACGUCCCCCGGUGCCGCACAGGAUUGCAUGAUACCAGCCACCUGAUUUCAACUCGAAAUCCGGAAUGGCGGAGC" ]
rfam_14_5_mafft
URS0000D680FA_12908_1-55
CCUUGACAGCCGCACUGGGCGGCUGACACUAGCCACGACAAGGAGAUUUUUCAUG
.((((.(((((.........))))).............)))).............
[ "URS0000D680FA_12908/1-55", "URS0000D6D28A_12908/1-53", "URS0000D6851B_12908/1-49", "URS0000D68B52_12908/1-49", "URS0000D69B54_12908/1-54", "URS0000D68798_12908/1-54", "URS0000D69FDB_12908/1-54", "URS0000D6C663_12908/1-55", "URS0000D6A455_12908/1-53", "URS0000D6A8BE_12908/1-53" ]
[ "CCUUGACAGCCGCACUGGGCGGCUGACACUAGCCACGACAAGGAGAUUUUUCAUG", "CCCUGACAGCCGCACCCUGUGGCUGACACUAGCCACGACAGGAGUAACUCAUG--", "CCUUGACUGCAAUUUU-----GCAGACAAUAGCCAAGACAAGGAGA-UUUACAUG", "CCUUGACUGCAAUCAA-----GCAGACACUAGCCACGACAAGGAGA-UUAAAAUG", "CCUUGACAGUCGCAUCCCGCGACUGACAUUUGCCACGACAAGGAGA-UUAACAUG", "CCUUGACAGC...
rfam_14_5_mafft
URS0000D680FC_12908_1-161
UUUGUCAGCGAUUAGGCAUGUUGCAGAACCAAAACUGCAAAAGUGACAAAGUAUUUCAUAGAAACACUUGCCGCUAUCUUGUGUGGUGAAAACCUGCAAAGUACAUAGAGUAAACAAAUUGGGCAAAAUACUGGUGGGAAUAGCGGUUCCAUCAGUAUUUU
(((((((..............(((((..[[.[[.)))))....)))))))((((((.......((((..({{{{{{{)..))))(((....)))....))))))..............]].]]...(((((((((((((}}}}}}})))))))))))))..
[ "URS0000D680FC_12908/1-161", "URS0000D6C982_12908/1-161" ]
[ "UUUGUCAGCGAUUAGGCAUGUUGCAGAACCAAAACUGCAAAAGUGACAAAGUAUUUCAUAGAAACACUUGCCGCUAUCUUGUGUGGUGAAAACCUGCAAAGUACAUAGAGUAAACAAAUUGGGCAAAAUACUGGUGGGAAUAGCGGUUCCAUCAGUAUUUU", "UUUGUCAGCGAUUAGGCAUGUUGCAGAACCAAAACUGCGAAAGUGACAAAGUAUUCCAUAGAAACACUUGGCGUCAUCUUGUGUGGUGAAAACCUGCAAAGUACAUAGAGUAAACAAAUUUGGCACAAUACUGGUAGGAAUGACGCUC...
rfam_14_5_mafft
URS0000D680FE_1144305_1-58
GGGUGUCCGGUCUUUGCGGGAGCGGGCAGGGUCUUUUGCGCUGGUCGGGCCGCCAGCG
....(((((.(((.....))).)))))...........(((((((......)))))))
[ "URS0000D680FE_1144305/1-58", "URS0000D6AB5C_12908/1-53" ]
[ "GGGUGUCCGGUCUUUGCGGGAGCGGGCAGGGUCUUUUGCGCUGGUCGGGCCGCCAGCG", "GGGUGUUCGCCAGUCGUG---GCGGGCAGGG--UGCAGCGCUGGUCGGGCCGCCGGCG" ]
rfam_14_5_mafft
URS0000D6810B_12908_1-77
ACGGUGGCACGAGUUUUUAUCGUUUCCUCGUCUUGGGUCCGUCCGAAGCCGAACGAUGUCAGGCUGGACCACACCGU
((((((..((((...............)))).....(((((.((.................)).)))))..))))))
[ "URS0000D6810B_12908/1-77", "URS0000D6A8E1_12908/1-77" ]
[ "ACGGUGGCACGAGUUUUUAUCGUUUCCUCGUCUUGGGUCCGUCCGAAGCCGAACGAUGUCAGGCUGGACCACACCGU", "ACGGCGGCACGAGUUUUUAUCGUUUCCUCGUCUUGGACCCGGCCGGAGCCGAACGAUGUCAGGCCGGAUCACGCCGU" ]
rfam_14_5_mafft
URS0000D6812A_12908_1-61
CCUAUGGAGAGUUGUAACCACUCUAGUAGUUCCGACGAACGAGAACUCGAUGAAAUAGGAA
(((((...(((((.......(((.....(((..)))....))))))))......)))))..
[ "URS0000D6812A_12908/1-61", "URS0000D67FD1_12908/1-61" ]
[ "CCUAUGGAGAGUUGUAACCACUCUAGUAGUUCCGACGAACGAGAACUCGAUGAAAUAGGAA", "CCUAUGGAGAGUUAAAACCACUUGAGUAGUUGCGACGAAAAAGAAUUCGAAGAAGUAGGAA" ]
rfam_14_5_mafft
URS0000D68130_12908_1-88
CUUACUAAUGGGUAGUAAGUUUAUGGGGACUAACCCUCCUCGUAGCGGAUAGAACCCGCAACGGACUUCUAAAAGGAGAAAUAAAAUG
((((((.......))))))..(((((((.........)))))))((((.......)))).............................
[ "URS0000D68130_12908/1-88", "URS0000D68B08_12908/1-80" ]
[ "CUUACUAAUGGGUAGUAAGUUUAUGGGGACUAACCCUCCUCGUAGCGGA-UAGAACCC-GCAACGGACUUCUAAAAGGAGAAAUAAAAUG", "---ACUCUCAUGGGGAGAGUUUAUGCGGA--AACCCACCGCGUACCAGGCUAGAACCUGGCAACAAA----UAAAAGGAGAAACAAAUG-" ]
rfam_14_5_mafft
URS0000D68135_1229202_1-51
AUUCCUACUGUUACUGUCCGGCUCCAUAAUUCAUAUAAUGAUGGACAGUGA
..........((((((((.........................))))))))
[ "URS0000D68135_1229202/1-51", "URS0000D67A06_216895/1-51", "URS0000D67A06_748003/1-51", "URS0000D67A06_196600/1-51", "URS0000D68A2F_1191298/1-50", "URS0000D69DFD_882102/1-50", "URS0000D69DFD_990998/1-50", "URS0000D69DFD_617133/1-50", "URS0000D69DFD_617132/1-50", "URS0000D69DFD_617134/1-50" ]
[ "AUUCCUACUGUUACUGUCCGGCUCCAUAAUUCAUAUAAUGAUGGACAGUGA", "AUUCCUACUGUUACUGUCCGGCUCCAUAAUUCAUAUAAUGAUGGGCAGUGA", "AUUCCUACUGUUACUGUCCGGCUCCAUAAUUCAUAUAAUGAUGGGCAGUGA", "AUUCCUACUGUUACUGUCCGGCUCCAUAAUUCAUAUAAUGAUGGGCAGUGA", "AUUCCUACUGUCAUUGCCU-GCAAGAAAACUCAUAUAAUGAUGGGCAGUGA", "AUUCCUGCUGUCAUUGCCU-GCAAGAAAAC...
rfam_14_5_mafft
URS0000D6813E_12908_1-62
AUAAUGAUACACCCGUAUGACACGGUUCACCCAUCAGAAUGGGAAUGGUGAAAGUCCAGUGG
............((((.....))))(((.(..........).)))(((.......)))....
[ "URS0000D6813E_12908/1-62", "URS0000D6813E_479831/1-62", "URS0000D6813E_272563/1-62", "URS0000D68FCA_12908/1-62", "URS0000D6801B_12908/1-62", "URS0000D65828_12908/1-62", "URS0000D65A2C_12908/1-62", "URS0000D66C89_12908/1-62", "URS0000D664C5_12908/1-62", "URS0000D664C5_411463/1-62" ]
[ "AUAAUGAUACACCCGUAUGACACGGUUCACCCAUCAGAAUGGGAAUGGUGAAAGUCCAGUGG", "AUAAUGAUACACCCGUAUGACACGGUUCACCCAUCAGAAUGGGAAUGGUGAAAGUCCAGUGG", "AUAAUGAUACACCCGUAUGACACGGUUCACCCAUCAGAAUGGGAAUGGUGAAAGUCCAGUGG", "AUAAUGAUACACCCGUAUGACACGGUUCACCCAUCAGAAUGGGAAUGGUGAAAUUCCAGUGG", "AUAAUGAUACACCCGUAUGACACGGUUCACCCAUCAGAAUGGG...
rfam_14_5_mafft
URS0000D68142_12908_1-49
UACCGGCAUCCAAUUGGGGAUGACCGAAGGACCAAUCGGGGUCAACAGA
...((((((((......))))).)))...((((......))))......
[ "URS0000D68142_12908/1-49", "URS0000D67620_12908/1-48", "URS0000D6ABED_12908/1-48", "URS0000D6A2AA_12908/1-48" ]
[ "UACCGGCAUCCAAUUGGGGAUGACCGAAGGACCAAUCGGGGUCAACAGA", "UGCCGUCAGCGAAUUGGCGUUGA-CGAAGGACCAAUCGGGGUCGACAGA", "UACCGUCGGCGAAUUGGCGUCGA-CGAAGGGCCAAUCGGGGUCGACAGA", "CGCCAUCCGGCAAUCGGGUCGGA-UGAAGGACCAAUCGGGGUCAACAGA" ]
rfam_14_5_mafft
URS0000D6815A_12908_1-55
AUUGAUGGGUGGGGCUAUAUGCCCCAUUAAAAUGCUUAGCAGGUCCAAAGCCCUG
(((..[[[(((((((.....)))))))...)))((....{{{..]]]..)).}}}
[ "URS0000D6815A_12908/1-55", "URS0000D6BD93_12908/1-52" ]
[ "AUUGAUGGGUGGGGCUAUAUGCCCCAUUAAAAUGCUUAGCAGGUCCAAAGCCCUG", "GCUGAUGGGUGGGCUU---CGGCCCAUUAAAGUACAUAGCAGGUCCAAAGUCCUG" ]
rfam_14_5_mafft
URS0000D6815C_12908_1-110
GCGAGUAGGGGACGCAGUGAUCCUCGGGCCGUCUACAACGGUCGCCUCGCCAGUGGAAGCUUCGCCGGCAGGCCCGAGGGGAGCGAGUGGCGAGACCGACCCCAGGACCG
..(..(.((((.(((......((((((((..........[[[[[[[.........................))))))))...)))...]]]]]..]]..)))).)..)..
[ "URS0000D6815C_12908/1-110", "URS0000D6D3AD_12908/1-107", "URS0000D67787_12908/1-108", "URS0000D6B65D_12908/1-105", "URS0000D69C49_12908/1-110", "URS0000D66DA4_12908/1-110" ]
[ "GCGAGUAGGGGACGCAGUGAUCCUCGGGCCGUCUACA--ACGGUCGC---------CUCGCCAGUGGAAGCUUCGCCGGCAGGCCCGAGGGGAGCGAGUGGCGAGACCGACCCCAGGACCG", "CUUCGCAGGGGACGUGUGGAUCCUUGGGCCGU-UGCAGGACGGUCGC---------CACGCUGGGUUAGG--UCACCAGCAGGCCCGAGGGGAGCGAGUGGCGAGACCGACCCCAGGAC--", "CACAGCAGGGGACGUUGAGAUCCUCGGGCCGU-UGCAAGACGGUCGC---------CGUGC...
rfam_14_5_mafft
URS0000D68163_12908_1-37
CCCGCCAAGCCUCUUUUUAAUGCUUAAAUCGGCGGGU
((((((.(((...........)))......)))))).
[ "URS0000D68163_12908/1-37", "URS0000D6B865_645462/1-36", "URS0000D6B865_367459/1-36", "URS0000D6638F_537011/1-37", "URS0000D66F5F_12908/1-37", "URS0000D68A1B_12908/1-37", "URS0000D6A011_12908/1-37", "URS0000D6725B_12908/1-37", "URS0000D68661_12908/1-37", "URS0000D66E4F_12908/1-37" ]
[ "CCCGCCAAGCCUCUUUUUAAUGCUUAAAUCGGCGGGU", "CCCGCCAAGCUUCUUU-UAUAGCUCAAAUAGGCGGGA", "CCCGCCAAGCUUCUUU-UAUAGCUCAAAUAGGCGGGA", "CCCGCCAAGCCUCUCGAUGAAGCUUAAAUCGGCGGGU", "CCCGCAAAGCCUCUUUUUAAUGCUUAAAUCGGCGGGU", "CCCGCCAAGCCUCUUUACAAUGCUUAAAUCGACGGGG", "CCUGCCAAGCCUCCUAAUAAUGCUUAAAUCGGCGGGU", "CCUGCCAAGCCUCU...
rfam_14_5_mafft
URS0000D68168_12908_1-101
AUAAUGAUACUUCUGUCCAGUCCUAAGGUCGAGCGAGAUAAAACCGUCACAGCCAAGGAGGGCAGCUCCGGGAGAUCCUCGGAGGGGUGAGAGUCCCAUGA
............((((((.........................................))))))(((.(((.....))).)))(((.......)))....
[ "URS0000D68168_12908/1-101", "URS0000D6997F_12908/1-60", "URS0000D6A651_12908/1-101" ]
[ "AUAAUGAUACUUCUGUCCAGUCCUAAGGUCGAGCGAGAUAAAACCGUCACAGCCAAGGAGGGCAGCUCCGGGAGAUCCUCGGAGGGGUGAGAGUCCCAUGA", "AUAAUGAUACUUCUGCUUA-----------------------------------------CGCAGCUCGGAGAGAUCCUCGGAGGGGUGAGAGUCCCAUGA", "ACAAUGAUACUUCCGUCCAGUCCUAAAGCCGAGCGAGAUAAAACCGUCACAGCAAAGGAGGGCGGCUCCGGGAGACCCUCGGGGUGGUGAGAUUCCAAUGA...
rfam_14_5_mafft
URS0000D68171_12908_1-64
UCUGUGGAGAGUUAUACCAAACUAGAGUAAACAUUAGUUGAAAUAGGACUUGAUGAAACAGAAA
(((((...(((((........(((.....(((....)))....))))))))......)))))..
[ "URS0000D68171_12908/1-64", "URS0000D69FC7_12908/1-61" ]
[ "UCUGUGGAGAGUUAUACCAAACUAGAGUAAACAUUAGUUGAAAUAGGACUUGAUGAAACAGAAA", "UCCGUGGACAGCUAUA-CAAACUAGAGUAA--CUUCGGUGAAAUAGGGCUGGAAGAAACGGAAA" ]
rfam_14_5_mafft
URS0000D6817C_12908_1-33
ACUGCGGACUCCGAAAAGCAAAAAGAGUAGGAA
..(((....[[[.....))).........]]].
[ "URS0000D6817C_12908/1-33", "URS0000D673C8_12908/1-33", "URS0000D6813B_12908/1-33", "URS0000D6AE5F_525257/1-33", "URS0000D65EEC_12908/1-33", "URS0000D6C4E6_12908/1-33", "URS0000D6B837_12908/1-33", "URS0000D6C36B_12908/1-33", "URS0000D6B1C3_702446/1-33", "URS0000D6CC8A_12908/1-33" ]
[ "ACUGCGGACUCCGAAAAGCAAAAAGAGUAGGAA", "ACUGCGGAUUCCGAAAAGCAAAAAGAGUAGGAA", "AGAGCGGAUACCGAAAAGCUAAAAGAGUAGGAA", "UAUGCGGAAGCCGAAAAGCAAAAAGAGUAGGUG", "AAAGCGGAAUUCGAAAAGCUAAAAGAGUAGGAA", "AAAGCGGAAUCCAAAAAGCUAAAAGAGUAGGAA", "AAAGCGGAAUCCGAAAAGCUAAAAGAGUAGGAA", "AAUGCAGAAUCCGAAAAGCUAAAAGAGUAGGAA", "GUG...
rfam_14_5_mafft
URS0000D68185_12908_1-138
GAUCCGCAGCCGGACGGAUCACAUGACACAGGCAGUCGGUGACAUUUUGUCCCCCAACUGCAGCCGAGUUCAGCGGCCGUGUCAGCAGUUGUGCAUUGGCACAGAGGUCUUUACCUCCGUACUGCGUUCGUACUGACC
((((((........))))))...((((((.((((((....................))))).((((.......)))))))))))(((((.((((....)))).(((((....)))))...))))).............
[ "URS0000D68185_12908/1-138", "URS0000D6B414_12908/1-137" ]
[ "GAUCCGCAGCCGGACGGAUCACAUGACACAGGCAGUCGGUGACAUUUUGUCCCCCAACUGCAGCCGAGUUCAGCGGCCGUGUCAGCAGUUGUGCAUUGGCACAGAGGUCUUUACCUCCGUACUGCGUUCGUACUGACC", "GAUCCGCAGCCGGACGGAUCACUUGACACAGGCAAACCGUGACGCUCUGU-CACGGCUUGCAGCCGAGUUCAGCGGUUGUGUCAGCAGUCGCUCUUUGGAGCAGAGGACUUUACCUCCGUACUGCAUUCGUACUGACC" ]
rfam_14_5_mafft
URS0000D6818C_12908_1-82
UAACUCCGUGUAUGGGUAGAACAGCCGAAAGGCUCUCUGACGCUUGCUGUUUUGCGUGGUUAGCCCUUAGCACGGAGUUGCU
(((((((((....(((((((...(((....)).).))).((((..........)))).....)))).....)))))))))..
[ "URS0000D6818C_12908/1-82", "URS0000D6923C_12908/1-81" ]
[ "UAACUCCGUGUAUGGGUAGAACAGCCGAAAGGCUCUCUGACGCUUGCUGUUUUGCGUGGUUAGCCCUUAGCACGGAGUUGCU", "CAACUCCGAAUAUGGGCGGAUAAGCCGAAAGGCUCUCCGACGC-UGCUGUUAUGCGUGGUUAGCCCUGUGUUCGGAGUUUUU" ]
rfam_14_5_mafft
URS0000D6819A_12908_1-117
GCAGAGUGACGACGUGAUGAUCCGCAUGGUCCUCACCGACACCCUUCAUCGGGUGCACGGAGACGACCGGUCGCCAGACCGUGCGGGGAGCGAGUGGCGAGACCGCCGUCCACCGGC
((.(...((((.(((......((((((((.......................................[[[[[[[...))))))))...)))...]]]]]..]]..))))...).))
[ "URS0000D6819A_12908/1-117", "URS0000D6701F_12908/1-113" ]
[ "GCAGAGUGACGACGUGAUGAUCCGCAUGGUCCUCACCGACACCCUUCAUCGGGUGCACGGAGACGACCGGUCGCCAGACCGUGCGGGGAGCGAGUGGCGAGACCGCCGUCCACCGGC-", "CGACAUGAACGACGUGAAGAUCCGCAUGGUCCUCACCGACACC---CGCCGGGUGCACGGAGAGAUCCGGUCGCCUGACCGUGCGGGGAGCGAGUGGCGAGACCGCCGU--ACCAACG" ]
rfam_14_5_mafft
URS0000D681BC_12908_1-82
ACCCUUGUGGUAUGGUGGCAGUUGGCGAAAGCUCUGCAAACGCUUUUCUUUGGGCGUUGGAACACCUAAGCCGUAAGGGUUU
(((((((((....((((((((..(((....))))))).(.(((..........))).)....)))).....)))))))))..
[ "URS0000D681BC_12908/1-82", "URS0000D69B20_1228997/1-80", "URS0000D68A8A_867902/1-80", "URS0000D669FA_867902/1-78", "URS0000D6A092_867902/1-80" ]
[ "ACCCUUGUGGUAUGGUGGCAGUUGGCGAAAGCUCUGCAAACGCUUUUCUUUGGGCGUUGGAACACCUAAGCCGUAAGGGUUU", "ACCCGUGUGGUAUGGUGGGGGUAUGCGAAAGCACCCCAAACGC--UUACUAUGGCGUUAGGACACCUAAGCCGUACGGGUUU", "ACCCGUGUGGUAUGGUGUAGGUAUGCGAAAGCACCU-AAACGCUGUCUUUGUGGCG-UGGAACACCUAAGCCGUGCGGGUUU", "GCCCGUGUGGUAUGGUGUGGGUAUGCGAAAGCACCU-AAACGC--UCGUUG...
rfam_14_5_mafft
URS0000D681BE_12908_26-95
CAAUUAAAACGGCCACGUUGUCCAUGGGCGGCGUGAGGGUCCGAAGCCCCUAUAAACAGUUGACGGGUUG
((((...(((.((((((((..........))))))[[[..{{{..)).]]].......)))..}}}))))
[ "URS0000D681BE_12908/26-95", "URS0000D6D2E0_12908/24-90", "URS0000D686CA_12908/26-94", "URS0000D6ACC9_12908/23-92", "URS0000D69455_12908/26-95", "URS0000D6CD4C_12908/26-95", "URS0000D6BF45_12908/29-98", "URS0000D6C7FE_12908/26-95", "URS0000D65FA0_12908/26-95", "URS0000D6C4B4_12908/26-95" ]
[ "CAAUUAAAACGGCCACGUUGUCCAUGGGCGGCGUGAGGGUCCGAAGCCCCUAUAAACAGUUGACGGGUUG", "CAACUAAAACGGCCACACCGUGAACG---GGUGUGAGUGUCCCAAGCCACUAUAAACCGUUGAGGGGUUG", "CAAUUAAAACGGCCACACCGU-CAUGGGCGGUGCGAGGGUCCGAAGCCCCUAUAAACAGUUGACGGGUUG", "CAAUUAAAACGGCCACGUUGUCCAUGGGCGGCGUGAGGGUCCGAAGCCCCUAUAAACAGUUGACGGGUUG", "CAAUUAAAACG...
rfam_14_5_mafft
URS0000D681C5_1188252_1-46
GGAGACUUUGCUCCGCGCACUAUCACGAUGAAGUGUUGCUCGGAGC
..........(((((.(((.................))).))))).
[ "URS0000D681C5_1188252/1-46", "URS0000D66930_1268076/1-46", "URS0000D66930_1268080/1-46", "URS0000D66930_1268237/1-46", "URS0000D66930_1156800/1-46", "URS0000D66930_12908/1-46", "URS0000D66930_382245/1-46", "URS0000D66930_1268075/1-46", "URS0000D66930_1268079/1-46", "URS0000D66930_1282886/1-46" ]
[ "GGAGACUUUGCUCCGCGCACUAUCACGAUGAAGUGUUGCUCGGAGC", "GGAGGCUGUGCUCCGUGCACUAACACGAUGAAGUGUUGCCCGGAGC", "GGAGGCUGUGCUCCGUGCACUAACACGAUGAAGUGUUGCCCGGAGC", "GGAGGCUGUGCUCCGUGCACUAACACGAUGAAGUGUUGCCCGGAGC", "GGAGGCUGUGCUCCGUGCACUAACACGAUGAAGUGUUGCCCGGAGC", "GGAGGCUGUGCUCCGUGCACUAACACGAUGAAGUGUUGCCCGGAGC", "GGA...
rfam_14_5_mafft
URS0000D681CB_12908_1-75
CCUACGGAGAGUACUAGAACUUGUGAGUAGCAUUUGAAGAAUUUCAUUACGAAAGCAUACUCGAUGAAGUAGGAA
(((((...(((((........(((.....(.(..((........)).).)....))))))))......)))))..
[ "URS0000D681CB_12908/1-75", "URS0000D678A9_12908/1-74", "URS0000D6BD00_12908/1-73", "URS0000D6D16E_658656/1-73", "URS0000D6D16E_12908/1-73", "URS0000D6BD8A_12908/1-73", "URS0000D6B366_12908/1-73", "URS0000D65F52_12908/1-73", "URS0000D662FD_12908/1-74", "URS0000D6BC17_12908/1-74" ]
[ "CCUACGGAGAGUACUAGAACUUGUGAGUAGCAUUUGAAGAAUUUCAUUACGAAAGCAUACUCGAUGAAGUAGGAA", "CCUGCGGAGAGUACUAGAACUUGUAAGUAGUGUUUGAAAAU-UCAGAUAUGAAAGCAUACUCAAUGAAACAGGAA", "CCUGCGGAGAGUACUAGAACUUGUGAGUAGUAUCGAAACAU-UC-GAUACAAAAGCAUACUCAAUGAAGCAGGAA", "CCUAUGGAGAGUACAAGAACUUGUAAGUAGUGAUUGACUUA--CCAACACGAAAGCAUACUCGUUGAAAUAG...
rfam_14_5_mafft
URS0000D681D4_537937_1-71
GAAACGCGAACCAAGCAGCCCCAUCCCAAGGGCAUGAGACUUGGAGCGAACACCCGCAAGAGUGUUCUACA
..........(((((..((((........))))......)))))...((((((.(....).))))))....
[ "URS0000D681D4_537937/1-71", "URS0000D67E3A_12908/1-69" ]
[ "GAAACGCGAACCAAGCAGCCCCAUCCCAAGGGCAUGAGACUUGGAGCGAACACCCGCAAGAGUGUUCUACA", "GAAGCGCGAACCAAGCAG--CCACGCAAGCGGCGUGAGACUUGGAGCGGACGAUCGCAAGACCGUCCUACA" ]
rfam_14_5_mafft
URS0000D681D5_12908_1-223
ACCUUAUAUAGAUGUAGUAACGCAAGACAGUAACGCAUUUCCCUGUAAGGUAGUGUUAAGUAGAAACUUUAACGAUAAGUACUAUUGUGUAGCUUUUAAAGUUGAAAUAGUAUGAGUCAAAGUGGAAUAGGUUAACCGUAAGACCUUGAAUUGAAAAGUUCUAAAAUUAAUCUAGAGAAACAAAAGUUAUUUUGCUAUUUUCACUAUUUCUAGUUACGGUGAA
((((((...((((((.((.((........)).)))))))).....)))))).................((........(((...(....(..........).......)...)..))...))......(((((.[[[[[[.))))).(((((....)))))..........(((((((...(..................).....))))))).]]]]]]...
[ "URS0000D681D5_12908/1-223", "URS0000D6B7C5_12908/1-203", "URS0000D665E3_12908/1-203", "URS0000D69F56_12908/1-203", "URS0000D6B737_12908/1-207", "URS0000D6CA17_12908/1-207", "URS0000D661EB_12908/1-207", "URS0000D690DC_12908/1-206", "URS0000D6BF4D_12908/1-207" ]
[ "ACCUUAUAUAGAUGUAGUAA-CGCAAGACAGUAACGCAUUUCCCUGUAAGGUAGUG-UUAAGUAGAAACUUUAACGAUAAGUACUAUUGUGUAGCUUUUAAAGUUGAAAUAGUAUGAGUCAAAGUGGAAUAGGUUAACCGUAAGACCUUGAAUUGAAAAGUUCUAAAAUUAAUCUAGAGAAACAAAAGUUAUUUUGCUAUUUUCACUAUUUCUAGUUACGGUGAA", "ACCUUAUACAAAUGUGUUAACUGCAAGACAAGUUAGCAUUUCCCUGUAAGGUGGUG-UUAAGUAGAAGCUUUAAUGACAAAUGU...
rfam_14_5_mafft
URS0000D681D6_12908_1-73
AAUGCCCUGUUUUUCGCGAAGUCCUACGUUCCACGUAGGAUAGAACCUAACGGUCUAGCGUAAACGGGGCUUU
((.(((((((((..(((...(((((((((...)))))))))................))).))))))))).))
[ "URS0000D681D6_12908/1-73", "URS0000D66102_12908/1-65" ]
[ "AAUGCCCUGUUUUUCGCGAAGUCCUACGUUCCACGUAGGAUAGAACCUAACGGUCUAGCGUAAACGGGGCUUU", "AAAGCCCUGUUGAU-GCGAAAUCUUACGUUUCACGUGAGA-------UACUAAUUUAGCUGAGACGGGGCUUU" ]
rfam_14_5_mafft
URS0000D681D8_12908_17-76
UCUCUAAACCAGCUACCGAAAGGUAAAGGUCUAAAGCCCUUGUAAAUUGGCGAUAGGAGA
((((....(((((((((....))))[[[..{{{..)).]]]......)))...}}}))))
[ "URS0000D681D8_12908/17-76", "URS0000D6B10D_12908/17-76" ]
[ "UCUCUAAACCAGCUACCGAAAGGUAAAGGUCUAAAGCCCUUGUAAAUUGGCGAUAGGAGA", "UCUUUAAACCAGCUACCAAAAGGUAAAGGUCUAAAGCCCUUGUAAAUUGGUGAUAGGAGA" ]
rfam_14_5_mafft
URS0000D681DA_12908_1-94
GUUAUUUGAGGUGGGAAAGGUUCCCCACGCGCUGCCUUUGCAAUUAUUAUUGCUCGGGUAGUUACCAGAGAUCAGGAGUGCCGCCCUGCUUAAC
((((...(..(((((...[[[..))))).(((((((....................)))))).....)....((((...]]]..))))).))))
[ "URS0000D681DA_12908/1-94", "URS0000D698F1_977905/1-82", "URS0000D6BB8D_12908/1-82", "URS0000D6A3D1_1132442/1-81" ]
[ "GUUAUUUGAGGUGGGAAAGGUUCCCCACGCGCUGCCUUUGCAAUUAUUAUUGCUCGGGUAGUUACCAGAGAUCAGGAGUGCCGCCCUGCU---UAAC-", "-UUAUUUUGAGGGGGAAAGGUUCCCCACGCGCUUAC----CCCUUG---------GGUAAGUUACCAGAGAUCAGGAUUACCGCCCUGCAAAAUAA--", "GGUUUUUGAGGUGGGAAAGGUACCCCACGCGCUA------CAGUUAG--------CUGUAGUUACCAGAGAUCAGGAUUGCCGCCCUGCU--UUAACC", "GUU...
rfam_14_5_mafft
URS0000D681EB_12908_1-68
GACUCCGAACUAAACUGUGGCGUUUAUCGUCGCGCUUCCCCUAAAAAGGAAUAGGUUCGGAGUUUUUC
(((((((((((.......((((.....))))....((((........))))..)))))))))))....
[ "URS0000D681EB_12908/1-68", "URS0000D6A812_12908/1-64", "URS0000D6AC9C_12908/1-65" ]
[ "GACUCCGAACUAAACUGUGGCGUUUAUCGUCGCGCUUCCCCUAAAAAGGAAUAGGUUCGGAGUUUUUC", "GCUUCCAGGCCAAAUUGUGGCGUUUAUCGCCGCGUUUCC----GAAAGGAAUAGGCUUGGGAGUUUUU", "GCCCCCGAACCAAACUGUGGCGUUUAUCGCCGCGUUCCCU---UCUUGGGAUAGGUUCGGGGGUUUCC" ]
rfam_14_5_mafft
URS0000D681F9_12908_1-49
GGGUGCCAUAUAAAAAUAUGGCAGGUAUGGUGAAGGCCGGGCCGCCUCA
....(((((((....)))))))........(((.(((......))))))
[ "URS0000D681F9_12908/1-49", "URS0000D6D34F_12908/1-49", "URS0000D68896_12908/1-49" ]
[ "GGGUGCCAUAUAAAAAUAUGGCAGGUAUGGUGAAGGCCGGGCCGCCUCA", "GGGUGCCAUAUGAAAAUGUGGCAGGUAUGGUGAAGGCCGGGCCGCCUCA", "GGGUGCCAUAUAAAAAUGUGGCAGGUAUGGUGAAGGCCGGGCCGCCUCA" ]
rfam_14_5_mafft
URS0000D68203_12908_1-88
GCUACAUGAGGUAGAGAUAGACUGCUUCUACGCGCCUGCUUUGCAGGUCAAAAGAGAUGCGGGAUCCGGCGCAGGCCCGCCAUGUACA
..((((((..(((((......[[[[.))))).((((((.....))))).....)....(((((.......]]]].)))))))))))..
[ "URS0000D68203_12908/1-88", "URS0000D6966B_12908/1-80", "URS0000D6CA94_12908/1-80" ]
[ "GCUACAUGAGGUAGAGAUAGACUGCUUCUACGCGCCUGCUUUGCAGGUCAAAAGAGAUGCGGGAUCCGGCGCAGGCCCGCCAUGUACA", "--UGCAUCAGAAGUAGAGAUUGUGCUGCUACACACC----CUUUGGGCCAAAAGAGAUGCGGGAAGGGGCACACCCGCCUGAUGAA--", "--UGCAUCAGAAGUAGAGAUUGUGCUGCUACACACC----CUUUGGGUCAAAAGAGAUGCGGGAAGGGGCACACCCGCCUGAUGCA--" ]
rfam_14_5_mafft
URS0000D6820F_12908_1-59
UCAAAAGAGUCGGUCAAUGCGAUUACUCCCAAGUUGGAAUAUCGGAAAACUGAUGAAGA
........((((((.....((((...(((......)))..))))....)))))).....
[ "URS0000D6820F_12908/1-59", "URS0000D6820F_440497/1-59", "URS0000D667C2_12908/1-59", "URS0000D6BD94_748671/1-59", "URS0000D66386_575596/1-59", "URS0000D66386_12908/1-59", "URS0000D698B8_12908/1-56", "URS0000D6833B_679188/1-56", "URS0000D6833B_12908/1-56", "URS0000D6833B_575595/1-56" ]
[ "UCAAAAGAGUCGGUCAAUGCGAUUACUCCCAAGUUGGAAUAUCGGAAAACUGAUGAAGA", "UCAAAAGAGUCGGUCAAUGCGAUUACUCCCAAGUUGGAAUAUCGGAAAACUGAUGAAGA", "CCAAAAGAGUCGGUCAAUGCGAUUACUCCCAAGUUGGAAUAUCGGAAAACCGAUGAGGA", "CCAAAAGAGUUGGUCAAUGCGAUUACUCCCAAGUUGGAAUAUCGGAAAACCGAUGAAGA", "CCAAAAGAGUCAGUCAAUGCGAUUACUCCUAAAUUGGAAUAUCGGAAAACUGAUG...
rfam_14_5_mafft
URS0000D68211_566550_1-202
UAAGAGUGCAGAUAGAGAUAUGCUGUAUACCUGCAUAACCGAAUUAACGUUUAAGCGACAUGUAAUGUCGUCGGCCGCAGGGACCGCCAUUUGGCGGUUAUCAUUCCUUAUCAUAUUUAGAUCAACAGAUCCCAUCAAACCUCUUAACCAAUGCGUAACACGAUGGGCCUGACCCCGGAGCAAUCCGGGGUUUUAUAUUUCG
......((((((((....))).)))))..(((((....((((((....)))....(((((.....))))).)))..))))).........................................................................................(((((((((....)))))))))..........
[ "URS0000D68211_566550/1-202", "URS0000D6A96D_12908/1-107", "URS0000D69E9E_1121114/1-107", "URS0000D6BA7E_997894/1-109" ]
[ "UAAGAGUGCAGAUAGAGAUAUGCUGUAUACCUGCAUAACCGAAUUAACGUUUAAGCGACAUGUAAUGUCGUCGGCCGCAGGGACCGCCAUUUGGCGGUUAUCAUUCCUUAUCAUAUUUAGAUCAACAGAUCCCAUCAAACCUCUUAACCAAUGCGUAACACGAUGGGCCUGACCCCGGAGCAAUCCGGGGUUUUAUAUUUCG", "UAUAUUUGCAGGUAGAAAUACGCUGUAUACCCGUGUAACCGAAUUAACGUUUAAGCGACAUGUAAUGUCGUCGGCCAU-GGGGCCGCCUACGGGCGGU-----UUUU...
rfam_14_5_mafft
URS0000D68213_12908_1-79
AUACAUAUCACAAAUGUUUUUUGCUAUUGGUUUGCAGGCUAGUAGCAUUCCUUUCUAACUACCUUAGGUAGUCUGCGAC
......................(((((((((.[[[[[)))))))))............(((((...))))).]]]]]..
[ "URS0000D68213_12908/1-79", "URS0000D69747_12908/1-78", "URS0000D67773_74546/1-78", "URS0000D6A90A_12908/1-78", "URS0000D67CDB_12908/1-78", "URS0000D678F5_12908/1-78", "URS0000D67B4A_12908/1-79", "URS0000D65EDE_12908/1-79", "URS0000D6890A_12908/1-79", "URS0000D6C4EA_12908/1-79" ]
[ "AUACAUAUCACAAAUGUUUUUUGCUAUUGGUUUGCAGGCUAGUAGCAUUCCUUUCUAACUACCUUAGGUAGUCUGCGAC", "AUACAUAUCA-AAAUGUUUUCUGCUAUUAGUUUGCAGGCUAAUGGCGUUCCUUUCUAACUACCGAAGGUAGUCUGCGAU", "AUACAUAACACAAAUAU-UUUUGCUAUUGGUUUGCAGGCUAAUAGCACUCCUUUCUAACUACCUAAGGUAGUCUGCGAU", "AUACAUAUCACAAACGU-UUUUGCUAUUGGUUUGCAGGCUAGUAGCAUUCCUUUCUAACU...
rfam_14_5_mafft
URS0000D68216_12908_1-105
UCAUAGGAUAGUUAUAUAACACGAAACUGACCUGAUGAGUUAGAUUACAUAGUGCGCACUAUGUAGUGACUUAAACGUGUAUAAAUAAAAGUUGAAACCUAUUAC
(.(((.((...)).)))).((((....((((.......))))(.(((((((((....))))))))))........))))..........................
[ "URS0000D68216_12908/1-105", "URS0000D660E4_12908/1-98", "URS0000D67C02_12908/1-98", "URS0000D66104_12908/1-102", "URS0000D67AF8_12908/1-101" ]
[ "--UCAUAGGAUAGUUAUAUAACACGAAACUGACCUGAUGAGUUAGAUUACAUAGUGCGCACUAUGUAG-UGACUUAAACGUGUAUAAAUAAAAGUUGAAACCUAUUAC", "--UCCUA------CUGCGAGACACGAAACUGACCUGAUGAGUUAGGCUAUAU-GUGCGCAC-AUAUAGUUGACUUAAACGUGUAUAAAUAAAAGUUGAAACCUAGUUC", "--UCCUA------CUGCGAGACACGAAACUGACCUGAUGAGUUAGGCUAUAU-GUGCGCAC-GUAUAGUUGACUUAAACGUGUAUAA...
rfam_14_5_mafft
URS0000D68222_12908_1-125
AGCCCAACCGCCGUAUCUAAUACGAUGAGUGGUUCUAAAAACUAACGAAAGCAAACACCUCCUCGUGAGGGUGCUUUCGUUAGUCGUAUUUAGGAAUAGGUACGGGCUUCGGCUAAGGUCGGGUC
((((....((.(((((...))))).))...)))).......(((((((((((..((.((((.....))))))))))))))))).((((((((....))))))))((((.((........))))))
[ "URS0000D68222_12908/1-125", "URS0000D6D017_12908/1-124" ]
[ "AGCCCAACCGCCGUAUCUAAUACGAUGAGUGGUUCUAAAAACUAACGAAAGCAAACACCUCCUCGUGAGGGUGCUUUCGUUAGUCGUAUUUAGGAAUAGGUACGGGCUUCGGCUAAGGUCGGGUC", "AGCCCAACCGCCGUAUCUAAUACGAUGAGUGGUUCUAAAAACUAACGAAAGCAAACACCUCCUCGUGAGGGUGCUUUCGUUAGUCGUAUUUAGGAAUAGGUACGGGC-UCGGCUAAGGUCGGGUC" ]
rfam_14_5_mafft
URS0000D68226_12908_1-171
UCUGACGGCAUCCGCCGCAGGACAAACAUAUACCACGAUACGGAAAGCCGGACGCUACUUGCAUGGACGCGGGGCGCGCGUUCCCCGCGUUUUCAUGGCUACGCCGUUACGCAUUUUAGACAGCGCGACAAGAAAGAAAUGUACGAGGUAUCAUUUUCCCAUGAACAGCAC
((((.............))))........(((((.((..((((..(((((...((.....))..(((((((..............)))))))...)))))...))))...(((((......................))))).)).)))))....................
[ "URS0000D68226_12908/1-171", "URS0000D6AF33_12908/1-170", "URS0000D66534_12908/1-171", "URS0000D65AE8_12908/1-171", "URS0000D68112_12908/1-171" ]
[ "UCUGACGGCAUC-CGCCGCAGGACAAACAUAUACCACGAUACGGAAAGCCGGACGCUACUUGCAUGGACGCGGGGCGCGCGUUCCCCGCGUUUUCAUGGCUACGCCGUUACGCAUUUUAGACAGCGCGACAAGAAAGAAAUGUACGAGGUAUCA--UUUUCCCAUGAACAGCAC", "UCUGACGGCCCG-CGCCGUCGGACAAACAUAUACCACGAUACGGGGAGCCGGACGCUUCUUGCAUGGGUGCGGCGCGUAUGCCCGCCGCGCUUUCAUGGCU-CCGCGUUACGCAUUUUAGACGGCAUACCGAGAA...
rfam_14_5_mafft
URS0000D68228_12908_1-124
GAUGCGCUACCGGACGGAUCACAGGACACCGGCGGAGCCUUCCGCAGCCGAGUUCAGCGGCAUGGUGUCCGCCACCGCUCCAUCGGAGCAGGGCACAUUUGUCCCAUGUGGCAGCGUACUGACC
(((.((.(....).)).)))...(((((((((((((....))))).((((.......)))).))))))))(((((.(((((...))))).((((......))))...)))))............
[ "URS0000D68228_12908/1-124", "URS0000D6629B_12908/1-124", "URS0000D66796_12908/1-123", "URS0000D65814_12908/1-123", "URS0000D67CE0_12908/1-124", "URS0000D687EF_12908/1-124", "URS0000D66729_12908/1-124", "URS0000D6D376_12908/1-124", "URS0000D6C234_12908/1-123", "URS0000D6C354_12908/1-124" ]
[ "GAUGCGCUACCGGACGGAUCACAGGACACCGGCGGAGCCUUCCGCAGCCGAGUUCAGCGGCAUGGUGUCCGCCACCGCUCCAUCGGAGCAGGGCACAUUUGUCCCAUGUGGCAGCGUACUGACC", "GAUCCGUCGCCGGGCGGAUCACAGGACACCGGCGGAGCCUUCCGCAGCCGAGUUCAGCGGCCGGGUGUCCGCCACCGCUCCCUUGGAGCAGGGUGUAUUCACCCCAUGUGGCAGCGUACUGACC", "GAUCCGCAGCCGGACGGAUCACGGGACACCGGCGGAGCCUUCCGCAGCCGAGUUC...
rfam_14_5_mafft
URS0000D68238_12908_1-106
CAGGAAACUGGUUAAUCGUUUUCCUUGGUAGUAUAGCGGAAACCAUAAAUAAGAAGAACUCUAAGUGCUUGAGUAGAGUUAAAAUAAUUAGACAGGCAAUAUUACA
.(((((..............)))))................................((((((...[[[[...))))))..............]]]].........
[ "URS0000D68238_12908/1-106", "URS0000D6CF57_12908/1-96", "URS0000D65B8D_12908/1-96" ]
[ "-----CAGGAAACUGGUUAAUCGUUUUCCUUGGUAGUAUAGCGGAAACCAUAAAUAAGAAGAACUCUAAGUGCUUGAGUAGAGUUAAAAUAAUUAGACAGGCAAUAUUACA", "GAUGGCGAGAG---------------CCAUCGGUAGUAUAGCGAAAAUCAUAAAUGAGAAGAGCUCUAAAUGCCUAAGUAGAGUUAAAAUAAUUAGACAGGCACUACUACA", "GAGGGCAAAAG---------------UCCUCGGUAGUAUAGCGAAAAUCAUAAAUAAGAAGAGCUCUAAGCGCCUAAGUAG...
rfam_14_5_mafft
URS0000D6823E_12908_1-59
GGGUGGGGAGGCAUGGUGCCGCCCCCAGGGUUCCCAAUCGGGUGGUCGGGCCGCCAUCC
....((((.(((.....))).).))).............(((((((......)))))))
[ "URS0000D6823E_12908/1-59", "URS0000D65FE3_12908/1-53", "URS0000D6633D_12908/1-49", "URS0000D65C9A_12908/1-56" ]
[ "GGGUGGGGAGGCAUGGUGCCGCCCCCAGGGUUCCCAAUCGGGUGGUCGGGCCGCCAUCC", "GGGUGGGAGGCAGUUGUUGCCUCUCAGGA------UUUCAAGUGGUCGGGCCGCCACCU", "GGGUGCGACGGC---UGGCCGUUGCAGGU-------UCGGGCUGGUCGGGCCGCCAGCC", "GGGUGCGUCGGCAUCGGGCCGCCGCAGGUAGAC---AUCGGGUGGUCGGGCCGCCACUC" ]
rfam_14_5_mafft
URS0000D6823F_12908_1-100
GUAAGCCCCAGCCCACAUGCCACGGUCAUCCACAGGUAAGAGCGGCCAAAUGCCGCCGCCGUGGCCCUUCCGCAAGGAAGGAGGGCUUGGGGCAGGAGGA
....(((((.((((....((((((((.............(.(((((.....))))))))))))))(.((((....)))).).))))..))))).......
[ "URS0000D6823F_12908/1-100", "URS0000D6C0E1_12908/1-100", "URS0000D6B51E_12908/1-96" ]
[ "GUAAGCCCCAGCCCACAUGCCACGGUCAUCCACAGGUAAGAGCGGCCAAAUGCCGCCGCCGUGG-CCCUUCCGCAAGGAAGGAGGGCUUGGGGCAGGAGGA", "GUAAGCCCAAGCCCGUAUGCCACGGUCAUCCAAAGGUAAGAGUUCCCAAAGGGAACCGCCGUGG-CCCUUCCGCAAGGAAGGAGGGCUUGGGAUAGGAGGA", "GUCAGCCC-AGCCCAAGUGCCACGGUCAUCCA-AGGUAAGUGCGGCCAAAGGCCGCCGCCGUGGUCCCUCCCGCAAGGGAGGAGGGCUGGGUGGAGGA---...
rfam_14_5_mafft
URS0000D68244_12908_1-64
UCUGUGGAGAAUUAUAUAAAACUAAAGUAAUAGAAAUAUGAAAUAGGAUUCUUUGAAACAGAAA
(((((...(((((........(((.....(((....)))....))))))))......)))))..
[ "URS0000D68244_12908/1-64", "URS0000D6CA73_12908/1-64" ]
[ "UCUGUGGAGAAUUAUAUAAAACUAAAGUAAUAGAAAUAUGAAAUAGGAUUCUUUGAAACAGAAA", "UCUGUGAAGAGUUAUACCAAACUAAAGUAAUAGAAAUAUGAAAUAGGACUCGUUGAAACAGAAA" ]
rfam_14_5_mafft
URS0000D68245_12908_1-98
CGAUUGGAUAGCAUCUUUGGAUGUGAAACUCGCCUGUAAUCCCGGCAUCAUCGCGCAAGCGGUGUGGCGACUGCUCUUGCUGCUGCGGCAGCAAUCUU
..........(((((....))))).....(((((..............((((((....)))))).)))))..........(((((...))))).....
[ "URS0000D68245_12908/1-98", "URS0000D6C95A_12908/1-98", "URS0000D67EA6_12908/1-98" ]
[ "CGAUUGGAUAGCAUCUUUGGAUGUGAAACUCGCCUGUAAUCCCGGCAUCAUCGCGCAAGCGGUGUGGCGACUGCUCUUGCUGCUGCGGCAGCAAUCUU", "CGAUUGGAUAGCAUCUUUGGAUGUGAAACUCGCCUGUAAUCCCGGCAUCACCGCGCAAGCGGUGUGGCGACUGCUCUUGCUGCUGCGGCAGCAAUCUU", "CGAUUGGAUAGCAUCUUCGGAUGUGAAACUCGCCUGUAAUCCCGGCAUCAUCGCGCAAGCGAUGUGGCGACUGCUCUUGCUGCUGCGGCAGUGAUUUU" ]
rfam_14_5_mafft
URS0000D6826B_12908_1-109
AAAGCGGUAUCGUAAGUCCUGGUGACCCUGGACCUUCGUAGAAGGUUCCUAGCUUCCGGUGCAACCCCGGAGGGACAGACUGAAAUCGGGGCCCAGGGUGAGCCGCUUU
(((((((..(((.....(((((...(((....(((((...))))).......(((((((.......)))))))...............))).))))).))).)))))))
[ "URS0000D6826B_12908/1-109", "URS0000D6AF17_12908/1-108", "URS0000D66464_12908/1-108", "URS0000D681E9_12908/1-109", "URS0000D68A91_12908/1-109" ]
[ "AAAGCGGUAUCGUAAGUCCUGGUGACCCUGGACCUUCGUAGAAGGUUCCUAGCUUCCGGUGCAACCCCGGAGGGACAGACUGAAAUCGGGGCCCAGGGUGAGCCGCUUU", "AAAGCGGUAUCAUAAGGCCUGGUGACCUUGGCCCUUCGUAGAAGGGACCUAGCUCCUGCUGAAA-UGCAGGAGGACAGAUUGAAAUCAAGGCCCAGGGUGAGCCGCUUU", "AAAGCGGUAUCGUAAGUCCUGGUGACCCUGGACCUUCGUAGAAGGUGCCUAGCUGGCGCUGAAA-UGCGUCGGGACAGACUGAAA...
rfam_14_5_mafft
URS0000D68272_406817_1-128
CUGACUAUAUCGAGGCUGGCUUUUAGCCGGAGGGGAUGACCUGUUAAUACAGGCGGCAGUACCGCGUACUCAACCGAUACCCCGCAAUACCUCAACACGCGUUCACUCUGGCGCACAGAUAUUCGUCA
.((((.(((((....((((((...)))))).((((....(((((....)))))(((.(((((...)))))...)))...))))..................................)))))..))))
[ "URS0000D68272_406817/1-128", "URS0000D6C0EF_1221520/1-127", "URS0000D6C0EF_1389415/1-127", "URS0000D67E04_291112/1-127", "URS0000D689F5_291112/1-127", "URS0000D65B9E_1306162/1-128", "URS0000D67366_406817/1-128", "URS0000D69C20_406817/1-128", "URS0000D6822D_1306162/1-128" ]
[ "CUGACUAUAUCGAGGCUGGCUUUUAGCCGGAGGGGAUGACCUGUUAAUACAGGCGGCAGUACCGCGUACUC-AACCGAUACCCCGCAAUACCUCAACACGCGUUCACUCUGGCGCACAGAUAUUCGUCA", "UUGACGAUACCGAGGCUGGC-UUUGGCCAGAGGGGAUAACCUGCCUACGCAGGCGGUAGUACAGCGUACUCAAACCGAUACCCCGCAAUACCUCAACA-GCGUUCACUCUGGCGCACAGGUAUCGUUCA", "UUGACGAUACCGAGGCUGGC-UUUGGCCAGAGGGGAUAACCUGCC...
rfam_14_5_mafft
URS0000D68273_12908_1-96
AAGCUUAGAGGUUGAAAAGUAUCCGCCUCUUCCAACGCGCCACCGAAAUGGUGGGAACAGAAAUGCGGGCGACCAAAGGCGGUCCCGCCUAAGCUU
((((((((..((((...........[[.[[..)))).(.(((((.....))))).....)....(((((........]].]].)))))))))))))
[ "URS0000D68273_12908/1-96", "URS0000D6BF06_12908/1-93", "URS0000D69800_12908/1-93", "URS0000D6C40D_12908/1-93", "URS0000D687BA_12908/1-93", "URS0000D687BA_768726/1-93", "URS0000D6A4BE_12908/1-93", "URS0000D6AE2F_12908/1-93", "URS0000D6608E_12908/1-93", "URS0000D68579_12908/1-93" ]
[ "AAGCUUAGAGGUUGAAAAGUAUCCGCCUCUUCCAACGCGCCACCGAAAUGGUGGGAACAGAAAUGCGGGCGACCAAAGGCGGUCCCGCCUAAGCUU", "GAGGAUAGAGGUUGAAAAGCAUCCGCC---UCCAACGCGCCACUUAGCUAGUGGGUCGAGAAAUGCGGGCGACAUUCGGCGGUCCCGCCUAUUCUU", "AAGGAUAGAGGUUGAAAAGCAUCCGCC---UCCAACGCGCCACUUAGCUAGUGGGUCGAGAAAUGCGGGCGACAUUCGGCGGUCCCGCCUAUCCUU", "GAGGAUAGA...
rfam_14_5_mafft
URS0000D68284_12908_1-93
AACUAAUCUUAUUUGCUCUUAGGUGUUACAAUUGUAAGUGAGAAAGAAAACUCACAGAAAUAAGAUAUCACAUUAAAUACUGAUAAUAUUUAA
.......((((((........................(((((........)))))...))))))........(((((((.......)))))))
[ "URS0000D68284_12908/1-93", "URS0000D667B7_12908/1-93", "URS0000D6C879_12908/1-93" ]
[ "AACUAAUCUUAUUUGCUCUUAGGUGUUACAAUUGUAAGUGAGAAAGAAAACUCACAGAAAUAAGAUAUCACAUUAAAUACUGAUAAUAUUUAA", "UGCUAAUCUUAUUUAACUCUAGGCUUUACAAUUGUAAAUGAGAAAGAAAACUCAUUGAAAUAAGAUACUACGUUAAAUACUGAUAAUAUUUAA", "AGCUAAUCUUAUUUAACUCUAGGACUUACAAUUGUAAAUGAGAAAGAAAACUCAUUGGAAUAAGAUACUACAUUAAAUACUGAUAAUAUUUAA" ]
rfam_14_5_mafft
URS0000D68286_12908_1-118
AGCUCCCUCGAAUCCAUAAGAACCCCCGUCCUGAUGUGGCAACGAUGAGAACCUAAGUGGUAAGGUACUAGAUAACGGCAGACCGAGGCUAGUUCGCAACACAGCGAAAAUCGUCGUA
.....(((((.................((.(((........[[[[[[[..((((........))))[[[[[.......))))))))))]]]]].................]]]]]]].
[ "URS0000D68286_12908/1-118", "URS0000D681FB_12908/1-115", "URS0000D691F3_12908/1-118", "URS0000D67D8E_12908/1-118", "URS0000D6906C_12908/1-118", "URS0000D678CC_12908/1-116", "URS0000D6A079_12908/1-118", "URS0000D6B638_12908/1-118" ]
[ "AGCUCCCUCGAAUCCAUAAGAACCCCCGUCCUGAUGUGGCAACGAUGAGAACCUAAGUGGUAAGGUACUAGAUAACGGCAGACCGAGGCUAGUUCGCAACACAGCGAAAAUCGUCGUA", "AGCUACCUCGAUUCCUUA--GUUCCCCGUCCUGGCGUGGCGACGAUGAGAACCUAUGUGAUAAGGUACCAGAUAAAGACAGACCGAGGCUGGUUCGCUUUA-AGCGAGAAUCAUCGUA", "AGCUCCCUCGAUUCCAUAAGAACCCCCGUCCUGAUGUGGCAACGAUGAAAACCUAAGUGGUAAGGUA...
rfam_14_5_mafft
URS0000D68299_12908_1-56
GGGUCCGGGGGUUGUGGGCCUCCGGAGGUCAGCGCGGGUGGUCGGGCCGCCACCCG
....((((((((.....)))))))).........((((.(((......))).))))
[ "URS0000D68299_12908/1-56", "URS0000D6BE4D_12908/1-55", "URS0000D6B1FD_12908/1-56" ]
[ "GGGUCCGGGGGUUGUGGGCCUCCGGAGGUCAGCGCGGGUGGUCGGGCCGCCACCCG", "-GGGUCCGGGGCUAUGUAGCCCCGGAGGUCAACGCGGAUGGUCGGGCCGCCAUCCG", "GGGUCCGUGGGCACUGACGCCCACGGAGGUUACGCGGCUGGUCGGGCCGCCAUCCG" ]
rfam_14_5_mafft
URS0000D682A8_12908_1-81
AAGUGUUGAGGUAGAAAGUUCUAUCACGGUGGCUAACGACCAAUAUCGGGAGGUGUGGGGUAUACCGUCCCACCAACACUU
((((((((..((((...[[.))).).((((.(....).)))........)....(((((....]]...)))))))))))))
[ "URS0000D682A8_12908/1-81", "URS0000D67BB4_12908/1-81" ]
[ "AAGUGUUGAGGUAGAAAGUUCUAUCACGGUGGCUAACGACCAAUAUCGGGAGGUGUGGGGUAUACCGUCCCACCAACACUU", "AAGUGUUGAGGUAGAAAGUUCUAUCACGGUGGCUAACGACCAAUAUCGGGAGGUGUGGGGAAUACCGUCCCACCAACACUU" ]
rfam_14_5_mafft